mRNA_H-elongata_contig53326.12673.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig53326.12673.1
Unique NamemRNA_H-elongata_contig53326.12673.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A6H5KJQ1_9PHAE (DHQ_synthase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJQ1_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 1.420e-99
Identity = 160/232 (68.97%), Postives = 174/232 (75.00%), Query Frame = 1
Query:    1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEELWAMHGD 696
            NI+NGLGEIMKLALVRSTELF LLE HG RLV++RF                                        Q  DGV+DRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEM P ADIMHGEAVNVDGF CLV+AKRRGMI++AVLDRVF VMK+IGLPTIHESV+L  MVK LADAVEHRHGKQRVPL+ GGIGSS CVND++  EL+GAI E WA+HGD
Sbjct:  319 NIINGLGEIMKLALVRSTELFSLLELHGARLVRDRF----------------------------------------QGADGVSDRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMEPAADIMHGEAVNVDGFLCLVIAKRRGMITEAVLDRVFRVMKSIGLPTIHESVQLAPMVKGLADAVEHRHGKQRVPLLKGGIGSSVCVNDINPDELKGAIAEAWALHGD 510          
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A835YRH6_9STRA (DHQ_synthase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRH6_9STRA)

HSP 1 Score: 255 bits (651), Expect = 8.060e-79
Identity = 134/230 (58.26%), Postives = 158/230 (68.70%), Query Frame = 1
Query:    1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEELWAMH 690
            N+VNGLGE+MKLALVRS ELF LLE HG RLV+ERF                                        Q  D VADRVIELS+QIMLEELGPNLWE KLERCVDYGHTFSKI+EM PGAD+MHGEAVNVDG  C+VLA  RG+IS AV DRVFA M+ +GLPT+H +V   ++ + LADAV+HR+G QR+PL++G IG++ CVND+   ELE A  +LWAMH
Sbjct:  345 NVVNGLGEVMKLALVRSAELFCLLEAHGARLVRERF----------------------------------------QGADPVADRVIELSIQIMLEELGPNLWEEKLERCVDYGHTFSKILEMEPGADLMHGEAVNVDGALCVVLAANRGLISAAVRDRVFAAMRGVGLPTLHPAVTPAALAQGLADAVQHRNGAQRIPLLTG-IGAAVCVNDITPAELEVACAQLWAMH 533          
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A7S3YJ31_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJ31_HETAK)

HSP 1 Score: 252 bits (644), Expect = 3.020e-78
Identity = 135/230 (58.70%), Postives = 156/230 (67.83%), Query Frame = 1
Query:    1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEELWAMH 690
            NIVNGLGE+MKLALVRS ELF LLE HGPRLV+ERF                                        Q  DG ADRVIE+S +IMLEELGPNLWE +LERCVDYGHTFSKIIEM PGADIMHGEAVN+DGF C+VL+ RRGMI+ A  DR+FA M+ + LPT  + + +  M+K LADAVEHRHG QR+PLI   IG S CVNDL  +ELEGA+ +L A+H
Sbjct:  284 NIVNGLGEVMKLALVRSPELFGLLEAHGPRLVRERF----------------------------------------QGADGAADRVIEMSTEIMLEELGPNLWEDQLERCVDYGHTFSKIIEMQPGADIMHGEAVNLDGFLCVVLSHRRGMITAAQRDRIFAAMRALNLPTTCDFMTIDVMMKGLADAVEHRHGAQRIPLIDD-IGHSVCVNDLSREELEGALADLAALH 472          
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A2V3J638_9FLOR (2-epi-5-epi-valiolone synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J638_9FLOR)

HSP 1 Score: 237 bits (604), Expect = 5.350e-73
Identity = 123/230 (53.48%), Postives = 150/230 (65.22%), Query Frame = 1
Query:    1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEELWAMH 690
            N+VNG+GEIMKLALVRS ELF LLEQHGP+L+  RFQ  +     A PH                                   RVIELS+QIMLEELGPNLWE++LERCVDYGHTFSKI+EMV    +MHGEAVN+DGF C++LA R+G IS  + DRVF+ MKNIGLPT H + +LK + KA+AD VEHRHGK R+PL+ G IGS   VN+    +L+  I +   +H
Sbjct:  227 NLVNGMGEIMKLALVRSPELFRLLEQHGPQLIATRFQSND-----AVPH-----------------------------------RVIELSIQIMLEELGPNLWEYRLERCVDYGHTFSKILEMVANPPVMHGEAVNIDGFLCILLAHRKGWISTQLRDRVFSAMKNIGLPTWHPACDLKVLTKAIADGVEHRHGKLRMPLVKGNIGSYGFVNECSEDDLKHVIAQAHQLH 416          
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: R7Q8J2_CHOCR (Probable 2-epi-valiolone synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8J2_CHOCR)

HSP 1 Score: 231 bits (588), Expect = 1.310e-70
Identity = 117/230 (50.87%), Postives = 147/230 (63.91%), Query Frame = 1
Query:    1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEELWAMH 690
            N++NG+GEIMKLALVRS ELF LLE HG RLVQ+RFQ                                          D V DRVIELS+QIMLEELGPNLWEH+LERCVDYGHTFSKI+EM     +MHGEAVN+DGF C++L+ R+G IS    +RVFA M+NIGLPT + +  +K + +A+ D +EHRHGK R+PL+ G IG S  +N+    +L+ AI ++  MH
Sbjct:  226 NLINGMGEIMKLALVRSKELFSLLEVHGKRLVQQRFQT----------------------------------------DDFVPDRVIELSIQIMLEELGPNLWEHRLERCVDYGHTFSKILEMTASPPVMHGEAVNIDGFICIILSHRKGWISTETRNRVFAAMRNIGLPTWNSACTIKLLSQAVTDGIEHRHGKLRMPLVRGNIGQSGFINECTEDQLQDAISQILEMH 415          
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A7S2Y0A6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0A6_9STRA)

HSP 1 Score: 231 bits (589), Expect = 9.510e-70
Identity = 123/230 (53.48%), Postives = 154/230 (66.96%), Query Frame = 1
Query:    1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEELWAMH 690
            NIVNGLGEIMKLALVRSTELF+LLE+HG RLV E+FQ +++                                        VADRVIELS++IMLEELGPNLWE+KLERCVD+GHTFSKIIEM P ADIMHGEAVN+DGF C++++ RRG+I+    +R+FA M  +GLPT  +   ++ + + L DAVEHRHG QR+PL+ G IG S  VND+   ELE A+ +L  +H
Sbjct:  296 NIVNGLGEIMKLALVRSTELFNLLEEHGERLVLEKFQGQDK----------------------------------------VADRVIELSIEIMLEELGPNLWEYKLERCVDFGHTFSKIIEMQPNADIMHGEAVNIDGFLCVLISHRRGLITLEERNRIFACMTAMGLPTTCDFCTMEVLKQGLIDAVEHRHGAQRIPLVKG-IGGSVVVNDITPAELEVALRDLVEVH 484          
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A4D9D105_9STRA (DHQ_synthase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D105_9STRA)

HSP 1 Score: 231 bits (589), Expect = 6.920e-69
Identity = 129/257 (50.19%), Postives = 160/257 (62.26%), Query Frame = 1
Query:    1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTI--------------------------HESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEELWAMHG 693
            N+VNGLGEIMKLALVRS ELF LLE HG RLV+ERFQ +                                        DGVADRV+ELS+QIMLEELGPNLWE +LERCVD+GHTFSKI+EM+P  D+MHGEAVN+DGFF ++LA+RRG+ S +  DR+F VM+ IGLPT+                               +K + K L DAVEHRHG+QR+PLI G +G S CV+D+  +ELEGA++EL+ +HG
Sbjct:  393 NVVNGLGEIMKLALVRSQELFLLLEAHGARLVRERFQGQ----------------------------------------DGVADRVMELSIQIMLEELGPNLWEERLERCVDFGHTFSKIMEMLPDVDLMHGEAVNIDGFFSVLLARRRGLCSLSERDRIFKVMRAIGLPTMVPRGPSSLPXXXXXXXXXXXXXXXXXXXXEMVKMLWKGLEDAVEHRHGQQRLPLIVG-LGHSVCVSDVTREELEGAVDELYDVHG 608          
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A1Z5J835_FISSO (3-dehydroquinate synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J835_FISSO)

HSP 1 Score: 224 bits (570), Expect = 8.310e-67
Identity = 119/226 (52.65%), Postives = 146/226 (64.60%), Query Frame = 1
Query:    1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEEL 678
            NI NG GEI+KLALVRS +LF LLE HG  LV  RF                                       S  P+ VA R+I+LS+QIMLEELGPNLWEH LERCVDYGHTFSK++EMVPGADIMHGEAVNVDGFFC V++  RG I +  +DRVF  MK+IGLPT    ++ +   ++  DAVEHRHG+QR+PLI+  IG S CV+D+  +EL+ A+E +
Sbjct:  337 NICNGFGEILKLALVRSVDLFELLETHGKALVDTRF------------------------------------APNSSVPEEVATRIIDLSIQIMLEELGPNLWEHNLERCVDYGHTFSKLLEMVPGADIMHGEAVNVDGFFCCVISFLRGYIPRETVDRVFKCMKSIGLPTNSADLDSELAWQSCKDAVEHRHGEQRIPLITD-IGESICVSDITPEELDRALEVM 525          
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A7S4NEJ8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NEJ8_9STRA)

HSP 1 Score: 223 bits (568), Expect = 3.580e-66
Identity = 125/228 (54.82%), Postives = 156/228 (68.42%), Query Frame = 1
Query:    1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMV--KALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEEL 678
            NI NG GEIMKLALVRST+LF LLE HG  LV+ RF      P  +TP                               +GV+DR+I+LS+QIMLEELGPNLWE KL+RCVDYGHTFSK++EMVPGADIMHGEAVNVDGFFC+VL+  RG I+   ++RVFA MK++ L T  +S +LKS +  ++  DAVEHRHG+QR+PLI+  IG S CV+D+  +EL+ AIE +
Sbjct:  373 NISNGFGEIMKLALVRSTDLFELLECHGAALVESRF-----GPNPSTP-------------------------------EGVSDRIIDLSIQIMLEELGPNLWETKLDRCVDYGHTFSKLLEMVPGADIMHGEAVNVDGFFCVVLSHLRGYIAMDTVNRVFAAMKSLALLT--DSSDLKSDLAWQSCKDAVEHRHGEQRIPLITE-IGESICVSDITPEELDRAIEMM 561          
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A5J4YMH0_PORPP (2-epi-5-epi-valiolone synthase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMH0_PORPP)

HSP 1 Score: 218 bits (555), Expect = 1.060e-65
Identity = 116/223 (52.02%), Postives = 142/223 (63.68%), Query Frame = 1
Query:    1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAI 669
            N++NGLGEIMKLALVRS ELF L+E+HG RLV+ERF                                        Q  DGVADRVIE+S+Q MLEELGPNLWE KLERCVDYGH+FSKIIE      +MHGEAVNVDGFFC+VL+  RG IS+ +  R+ AVM+ +GLP    S+ L ++ +A +DA+EHRHG+ R+PL+   IG    VN+L   ELE AI
Sbjct:  233 NVINGLGEIMKLALVRSPELFGLIEKHGARLVKERF----------------------------------------QSDDGVADRVIEISIQTMLEELGPNLWEFKLERCVDYGHSFSKIIEFESAPPLMHGEAVNVDGFFCVVLSLMRGWISEPLCLRILAVMRQLGLPVFDASMTLPNLARACSDALEHRHGQLRMPLVRNAIGEYGFVNELSEDELERAI 415          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJQ1_9PHAE1.420e-9968.97DHQ_synthase domain-containing protein n=2 Tax=Ect... [more]
A0A835YRH6_9STRA8.060e-7958.26DHQ_synthase domain-containing protein n=1 Tax=Tri... [more]
A0A7S3YJ31_HETAK3.020e-7858.70Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2V3J638_9FLOR5.350e-7353.482-epi-5-epi-valiolone synthase n=1 Tax=Gracilariop... [more]
R7Q8J2_CHOCR1.310e-7050.87Probable 2-epi-valiolone synthase n=1 Tax=Chondrus... [more]
A0A7S2Y0A6_9STRA9.510e-7053.48Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D105_9STRA6.920e-6950.19DHQ_synthase domain-containing protein n=1 Tax=Nan... [more]
A0A1Z5J835_FISSO8.310e-6752.653-dehydroquinate synthase n=2 Tax=Fistulifera sola... [more]
A0A7S4NEJ8_9STRA3.580e-6654.82Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A5J4YMH0_PORPP1.060e-6552.022-epi-5-epi-valiolone synthase n=1 Tax=Porphyridiu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53326contigH-elongata_contig53326:12..1684 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score293.5
Seed ortholog evalue8.3e-77
Seed eggNOG ortholog2880.D7G807
KEGG rclassRC00847,RC00848
KEGG koko:K01735,ko:K03785
KEGG ReactionR03083,R03084
KEGG Pathwayko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230
KEGG ModuleM00022
EggNOG free text desc.shikimate 3-dehydrogenase (NADP ) activity
EggNOG OGsCOG0169@1,KOG0692@2759
EC4.2.1.10,4.2.3.4
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSimilar to 2-Epi-5-Epi-Valiolone Synthase (Sedoheptulose 7-Phosphate Cyclase)
Ec32 orthologEc-06_009700.1
Exons5
Model size699
Cds size672
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53326.12673.1prot_H-elongata_contig53326.12673.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig53326 39..1684 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930869.8450627-UTR-H-elongata_contig53326:11..381622930869.8450627-UTR-H-elongata_contig53326:11..38Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig53326 12..38 +
1691679605.132738-UTR-H-elongata_contig53326:11..381691679605.132738-UTR-H-elongata_contig53326:11..38Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig53326 12..38 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930869.8947513-CDS-H-elongata_contig53326:38..1271622930869.8947513-CDS-H-elongata_contig53326:38..127Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53326 39..127 +
1691679605.145549-CDS-H-elongata_contig53326:38..1271691679605.145549-CDS-H-elongata_contig53326:38..127Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53326 39..127 +
1622930869.9147837-CDS-H-elongata_contig53326:342..3901622930869.9147837-CDS-H-elongata_contig53326:342..390Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53326 343..390 +
1691679605.1554601-CDS-H-elongata_contig53326:342..3901691679605.1554601-CDS-H-elongata_contig53326:342..390Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53326 343..390 +
1622930869.9443028-CDS-H-elongata_contig53326:405..5671622930869.9443028-CDS-H-elongata_contig53326:405..567Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53326 406..567 +
1691679605.1641278-CDS-H-elongata_contig53326:405..5671691679605.1641278-CDS-H-elongata_contig53326:405..567Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53326 406..567 +
1622930869.962785-CDS-H-elongata_contig53326:1005..12281622930869.962785-CDS-H-elongata_contig53326:1005..1228Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53326 1006..1228 +
1691679605.175088-CDS-H-elongata_contig53326:1005..12281691679605.175088-CDS-H-elongata_contig53326:1005..1228Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53326 1006..1228 +
1622930869.9750235-CDS-H-elongata_contig53326:1534..16841622930869.9750235-CDS-H-elongata_contig53326:1534..1684Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53326 1535..1684 +
1691679605.1839178-CDS-H-elongata_contig53326:1534..16841691679605.1839178-CDS-H-elongata_contig53326:1534..1684Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53326 1535..1684 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig53326.12673.1

>prot_H-elongata_contig53326.12673.1 ID=prot_H-elongata_contig53326.12673.1|Name=mRNA_H-elongata_contig53326.12673.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=224bp
MKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFD
SIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLER
CVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDR
VFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSA
CVNDLDAKELEGAIEELWAMHGDA
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mRNA from alignment at H-elongata_contig53326:12..1684+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig53326.12673.1 ID=mRNA_H-elongata_contig53326.12673.1|Name=mRNA_H-elongata_contig53326.12673.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1673bp|location=Sequence derived from alignment at H-elongata_contig53326:12..1684+ (Himanthalia elongata Himel1 dioecious)
AACATCGTCAACGGCCTCGGAGAGATCATGAAGCTGGCGCTGGTGCGGTC GACGGAGCTGTTCCATCTTCTCGAGCAGCATGGTCCTCGCCTTGTGCAGG AGCGCTTCCAGGTGCGGTTGCCAAGACCCCTCGACGAGGCTCCATTAGGT CACCCTGGCTTCTCATCTTTCCATTATCATTTTTGTGCGATTTCCTTGCG AAAAACAGAACAAAATTTATTGCTGCAAAGAGAAAGGACAAAACACCTCA AGGTTTTGTTAGAATTGCGATGCGGTCCTCTCTCCCCGAAGATATACCGC AATCGGTCTATTTGAGGAGTCCCACGGCCAGGGAAAGAAGCCCTCAGTTC GCGACACCACATCTCGCTGCTTCTCTAGAGTTAGGACTGTAAAGCGTGAA ATTTGACTCGATTTATTTAGCATGTCGCTTTGTTCACGGTTATTTTTGCG CTGGATCCCAGTGCCCCGACGGAGTGGCCGATAGGGTCATCGAGCTTTCC GTGCAGATTATGCTTGAGGAGCTCGGTCCTAACCTGTGGGAGCACAAGCT GGAACGGTCAGTATTTTACATTCCTCTCAGAGCCTTGAGGTGGCTCAGTC TGTTTTGGGTGCAAACGTGTTGACTCTCAAGAGGTTAAACTGGAACCTTG CTGCGAAGAGTAAGAACATAGTAAATTAAGGCCTGCGCCGACATAGTTTG GCGAGTAATCGACGAGCTTTTTGTATCACGTCACCTCTTGCCGCCAGCGC AAAGTGCACAAAAGTAATGTTACTTGTACCAGTATGTTATTATATTTATG AACAACACGATAGGCCCCATGCGGGGGGGGGATGGGGGGGGGAACAGGCA ACCAAATCGAACATCCCAGTGTCACCGTAAAGGGCTTCACCACGATACGC TCGATTTCGAAAGTGGTGGTGTCTTCAATATCTTCAAGTGCCAGCCCTCC ACCCCTCGTTACTCGACATCGCCCGCACCGCGCGAACGGTGCAGTTGCGT TGACTACGGACACACTTTCAGCAAGATCATCGAGATGGTTCCCGGGGCCG ACATTATGCACGGAGAGGCCGTAAACGTGGACGGCTTCTTCTGCCTCGTC CTCGCCAAGCGCCGTGGCATGATCTCGCAGGCCGTGCTGGACAGGGTCTT CGCCGTCATGAAGAACATCGGCCTCCCCACCATTCACGAGAGCGTGGAGC TCAAGTCAATGGTCAAGGTGGGGAAATATAAATGCCTGAATGAGTGTTGC GGCAATATACGCAAACTGTTTGTGCGGCATTGGTTGTCTGTTTCCCGCTG GTGAAGGGCTTTTGATCGAGGGGCAAAGGGAAAAGGTCTTCCTTCAACAA ATTAGAACCTGACGATAGTTGGTCCTCTGGACTACACCTCATGGTGCTAA AAAGGCGTGAATGTTCGAAGGGTTCTAATGAGTTCAAGATTTTTAAATAA AAAATCATTGATTGATCTTCTATCCCTGGCCCGCTTAACTAATCCCGCTC ACTTTTTGAACGATCGACCGCAGGCTCTGGCGGACGCCGTGGAGCACCGT CATGGAAAGCAGCGCGTGCCGCTTATCTCAGGCGGGATCGGCTCCTCCGC GTGCGTGAATGATCTCGACGCCAAAGAACTTGAGGGCGCCATCGAGGAGC TCTGGGCCATGCATGGCGACGCT
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Coding sequence (CDS) from alignment at H-elongata_contig53326:12..1684+

>mRNA_H-elongata_contig53326.12673.1 ID=mRNA_H-elongata_contig53326.12673.1|Name=mRNA_H-elongata_contig53326.12673.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1344bp|location=Sequence derived from alignment at H-elongata_contig53326:12..1684+ (Himanthalia elongata Himel1 dioecious)
ATGAAGCTGGCGCTGGTGCGGTCGACGGAGCTGTTCCATCTTCTCGAGCA
GCATGGTCCTCGCCTTGTGCAGGAGCGCTTCCAGGTGCGATGAAGCTGGC
GCTGGTGCGGTCGACGGAGCTGTTCCATCTTCTCGAGCAGCATGGTCCTC
GCCTTGTGCAGGAGCGCTTCCAGGTGCGGGAAAGAAGCCCTCAGTTCGCG
ACACCACATCTCGCTGCTTCTCTAGAGGAAAGAAGCCCTCAGTTCGCGAC
ACCACATCTCGCTGCTTCTCTAGACGTGAAATTTGACTCGATTTATTTAG
CATGTCGCTTTGTTCACGGTTATTTTTGCGCTGGATCCCAGTGCCCCGAC
GGAGTGGCCGATAGGGTCATCGAGCTTTCCGTGCAGATTATGCTTGAGGA
GCTCGGTCCTAACCTGTGGGAGCACAAGCTGGAACGCGTGAAATTTGACT
CGATTTATTTAGCATGTCGCTTTGTTCACGGTTATTTTTGCGCTGGATCC
CAGTGCCCCGACGGAGTGGCCGATAGGGTCATCGAGCTTTCCGTGCAGAT
TATGCTTGAGGAGCTCGGTCCTAACCTGTGGGAGCACAAGCTGGAACGTT
GCGTTGACTACGGACACACTTTCAGCAAGATCATCGAGATGGTTCCCGGG
GCCGACATTATGCACGGAGAGGCCGTAAACGTGGACGGCTTCTTCTGCCT
CGTCCTCGCCAAGCGCCGTGGCATGATCTCGCAGGCCGTGCTGGACAGGG
TCTTCGCCGTCATGAAGAACATCGGCCTCCCCACCATTCACGAGAGCGTG
GAGCTCAAGTCAATGGTCAAGTTGCGTTGACTACGGACACACTTTCAGCA
AGATCATCGAGATGGTTCCCGGGGCCGACATTATGCACGGAGAGGCCGTA
AACGTGGACGGCTTCTTCTGCCTCGTCCTCGCCAAGCGCCGTGGCATGAT
CTCGCAGGCCGTGCTGGACAGGGTCTTCGCCGTCATGAAGAACATCGGCC
TCCCCACCATTCACGAGAGCGTGGAGCTCAAGTCAATGGTCAAGGCTCTG
GCGGACGCCGTGGAGCACCGTCATGGAAAGCAGCGCGTGCCGCTTATCTC
AGGCGGGATCGGCTCCTCCGCGTGCGTGAATGATCTCGACGCCAAAGAAC
TTGAGGGCGCCATCGAGGAGCTCTGGGCCATGCATGGCGACGCTGCTCTG
GCGGACGCCGTGGAGCACCGTCATGGAAAGCAGCGCGTGCCGCTTATCTC
AGGCGGGATCGGCTCCTCCGCGTGCGTGAATGATCTCGACGCCAAAGAAC
TTGAGGGCGCCATCGAGGAGCTCTGGGCCATGCATGGCGACGCT
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