mRNA_H-elongata_contig52923.12617.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig52923.12617.1 vs. uniprot
Match: D7G5Y4_ECTSI (NB-ARC and TPR containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y4_ECTSI) HSP 1 Score: 431 bits (1107), Expect = 3.820e-135 Identity = 248/510 (48.63%), Postives = 324/510 (63.53%), Query Frame = 1
Query: 1 ISFPAAAPLIRPWYVERTNSIAESCARLGIQSVD-------QKPRVVGLSGPSGAGKSTVASMVIAREDVQAFFRNGVLWLPVGRGAKNRIPALTLQLASMVYEDVLERACRPPRKADVGIEPEDGVAYIREMVVEVDRRLLVVVDDVWEEEVLHELQKIGAWVLYTSRVAGLLDDAP-LRLDQVQTEEAEAVLRRAAELEDETRLPETAHELIRRSEFLVMDLAFVGRWGAVRMKSSSEAWKEVLDCI-ERARDGNDDDDDPGKHLPWRTAVLRAGLEELELDDALNIELYLSLAVLPDGLVFGTEEVSALLYGDDETSPSCSSPKALEAASAVAANLERWSIFTLEDG-GRYRVHDLHAEFIKERAARSPTAR---RDKAARRWKEHVSTVDALLTWSGAELADIWRTLEKLNGASVGPRPYGSALETL-SSSDSSSRDALRRLAHFHYLKEDYEGAYEANTALLKMEEEELGRDHPDVARALHNLAVCASEAGRTEEAEGLYERSLA 1488
++ P+ AP IR WYVER + C LGI + + ++PR+VGL+GP GAGKSTVASMV+ + DVQAFFR VLWL VG+GAK+R+PAL +LA+ V E VL++ R PR+A VGI EDG AYIRE + D R LVV DDVW+ EVL EL++ GAWV+YT+R L P +RL++V EEAE +LRRAA+L ++ RLP A+EL++R +F V+DLA VGRWG +R +S AW+ LD I E R G D G+ LPWR AVLRAGL L D+ ELY +LA+LP GL F E LLYGDD S AL+AA AV LER SI TLE+ G Y VH+ H +F+ +R P A+ RD A RW+ ++S+V AL T+S A L +W L K+ G PY +AL + S+ +ALRR A FH+ +ED+ A++ + LL ++E+ G HPDVA+ LHNL +CA E GR +E EG R+LA
Sbjct: 7 VNIPSGAPSIRDWYVERVGVATQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPALMFELANRVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLGELRRAGAWVIYTTRKTELFPGTPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCESAWRAALDSIIETQRAGGDG----GQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDF------SESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDR----PLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLSKVEGEGFVRSPYNAALNAIMDDSEGELLEALRRAAEFHFCREDWSEAFDKYSNLLLIKEQTAGPHHPDVAKILHNLGMCACEVGREKETEGYLRRALA 502
BLAST of mRNA_H-elongata_contig52923.12617.1 vs. uniprot
Match: A0A6H5KXU5_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU5_9PHAE) HSP 1 Score: 435 bits (1119), Expect = 9.920e-135 Identity = 251/510 (49.22%), Postives = 327/510 (64.12%), Query Frame = 1
Query: 1 ISFPAAAPLIRPWYVERTNSIAESCARLGIQSV-------DQKPRVVGLSGPSGAGKSTVASMVIAREDVQAFFRNGVLWLPVGRGAKNRIPALTLQLASMVYEDVLERACRPPRKADVGIEPEDGVAYIREMVVEVDRRLLVVVDDVWEEEVLHELQKIGAWVLYTSRVAGLLDDAP-LRLDQVQTEEAEAVLRRAAELEDETRLPETAHELIRRSEFLVMDLAFVGRWGAVRMKSSSEAWKEVLDCI-ERARDGNDDDDDPGKHLPWRTAVLRAGLEELELDDALNIELYLSLAVLPDGLVFGTEEVSALLYGDDETSPSCSSPKALEAASAVAANLERWSIFTLEDG-GRYRVHDLHAEFIKERAARSPTAR---RDKAARRWKEHVSTVDALLTWSGAELADIWRTLEKLNGASVGPRPYGSALETL-SSSDSSSRDALRRLAHFHYLKEDYEGAYEANTALLKMEEEELGRDHPDVARALHNLAVCASEAGRTEEAEGLYERSLA 1488
++ P+ AP IR WYVER A+ C LGI + +++PR+VGL+GP GAGKSTVASMV+ + DVQAFFR VLWL VG+GAK+R+P L +LA V E VL++ R PR+A VGI EDG AYIRE + D R LVV DDVW+ EVL EL++ GAWV+YT+R A L + P +RL++V EEAE +LRRAA+L ++TRLP A+EL+RR +F V+DLA VGRWG +R +S AW+ LD I E R G D G+ LPWR AVLRAGL L D+ ELY +LA+LP GL F E LLYGDD S AL+AA AV LER SI TLE+ G Y VH+ H +F+ +R P A+ RD A RW++++S+V AL T+S A L +W L K+ G PY +AL + S+ +ALRR A FH+ + D+ A++ + LL ++E+ G DHPDVA+ LHNL +CA E GR +E EG R+LA
Sbjct: 173 VNIPSGAPSIRDWYVERVKVEAQICHHLGIGTSNGIPSFPEEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPTLMFELAKTVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRKAELFPETPAIRLEEVLEEEAEMMLRRAADLGEKTRLPPAAYELMRRCDFSVLDLALVGRWGKIRGRSCERAWRAALDSIIETQRAGGDG----GQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDF------SESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDR----PLAKHYTRDTALPRWRQYISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRSPYNAALSAIMDDSEGELLEALRRAAEFHFCRGDWSEAFDKYSELLLIKEQTAGPDHPDVAKILHNLGMCACEVGREKETEGYLRRALA 668
BLAST of mRNA_H-elongata_contig52923.12617.1 vs. uniprot
Match: A0A6H5KZP3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZP3_9PHAE) HSP 1 Score: 420 bits (1079), Expect = 2.030e-128 Identity = 249/505 (49.31%), Postives = 313/505 (61.98%), Query Frame = 1
Query: 1 ISFPAAAPLIRPWYVERTNSIAESCARLGIQSVDQK----PRVVGLSGPSGAGKSTVASMVIAREDVQAFFRNGVLWLPVGRGAKNRIPALTLQLASMVYEDVLERACRPPRKADVGIEPEDGVAYIREMVVEVDRRLLVVVDDVWEEEVLHELQKIGAWVLYTSRVAGLLDDAPL-RLDQVQTEEAEAVLRRAAELEDETRLPETAHELIRRSEFLVMDLAFVGRWGAVRMKSSSEAWKEVLDCIERA--RDGNDDDDDPGKHLPWRTAVLRAGLEELELDDALNIELYLSLAVLPDGLVFGTEEVSALLYGDDETSPSCSSPKALEAASAVAANLERWSIFTLEDGGRYRVHDLHAEFIKERAARSPTARRDKAARRWKEHVSTVDALLTWSGAELADIWRTLEKLNGASVGPRPYGSALETLSSSDSSSRDALRRLAHFHYLKEDYEGAYEANTALLKMEEEEL-GRDHPDVARALHNLAVCASEAGRTEEAEGLYERSLAI 1491
++ P+ AP I W+VER ++AE+C LGI S + PRVVG+SGP G+GKST+ASMVIAR+DV+ +F GVLWLPVG GAK+ +P L L LA MVYE VL +ACRPPR A VG++PEDG YI E+V E + R LVV DD+ E EVL EL+ G WVLYTSR LL APL RLD V EE VLRRAA L D+ LP AHEL++R E+ M LAF GRWG VR KS EAW+ L I A R GN G+ L WR A+LR G +ELE D ELYLSLA+LP GL F ++ + LLYGD+ CS+ + LEAA LER SI TLE G+YRVH++HA+F++E + R+ A RW+ + S + AL T+S A L IW + +L G PY +AL+ + S AL+R A FH+ +ED AY L +EE G VA+ LH L +C +AGR EEAE Y+R+L I
Sbjct: 122 VAVPSGAPRIHEWHVERKEAVAEACDSLGIGSGKSEFFEMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPVGEGAKHCLPELMLHLARMVYETVLRKACRPPRLAGVGVDPEDGAGYIHEVVNESNHRFLVVADDIREPEVLEELKWAGVWVLYTSRRDDLLTGAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQRCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRGGN------GRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDE-----CSADE-LEAAGKALETLERLSILTLEVSGKYRVHEVHADFVRECEVAN-NEEREMALARWRGYASDLRALSTYSSAWLVKIWDVIAQLEGTGPVASPYDAALDRVDPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALTI 613
BLAST of mRNA_H-elongata_contig52923.12617.1 vs. uniprot
Match: A0A6H5JL31_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL31_9PHAE) HSP 1 Score: 358 bits (919), Expect = 2.780e-104 Identity = 226/505 (44.75%), Postives = 299/505 (59.21%), Query Frame = 1
Query: 1 ISFPAAAPLIRPWYVERTNSIAESCARLGIQ----SVDQKPRVVGLSGPSGAGKSTVASMVIAREDVQAFFRNGVLWLPVG-RGAKNRIPALTLQLASMVYEDVLERACRPPRKADVGIEPEDGVAYIREMVVEVDRRLLVVVDDVWEEEVLHELQKIGAW-VLYTSRVAGLLDDAPL-RLDQVQTEEAEAVLRRAAELEDETRLPETAHELIRRSEFLVMDLAFVGRWGAVRMKSSSEAWKEVLDCIERARDGNDDDDDPGK-HLPWRTAVLRAGLEELELDDALNIELYLSLAVLPDGLVFGTEEVSALLYGDDETSPSCSSPKALEAASAVAANLERWSIFTLEDGGRYRVHDLHAEFIKERAARSPTARRDKAARRWKEHVSTVDALLTWSGAELADIWRTLEKLNGASVGPRPYGSALETLSSSDSSSRDALRRLAHFHYLKEDYEGAYEANTALLKMEEEELGRDHPDVARALHNLAVCASEAGRTEEAEGLYERSLAI 1491
+ P AP IR +VER I++ C+ LGI+ + + +VVGL+G G+GKSTVASMVI REDV+AFF GVLWL VG R ++R+ L LA MVYE V ++ CRP RK +G + ED AYI+ + VE RR LVV DDVW+ EVL EL++ W VLYTSR LL AP+ LDQ+ EEAE VLR AAEL + LPE A++L+RR E+ +DL FVGRW R ++S AW+ LDCI A+ + G+ L WR AVL GLEEL +++ N ELYL+LAV+P G F + + LLYGD + + E A + LERWSI T GG YRVHD H +FI+ A + AR R W+ ++S+V AL+T S L++ W L + G V +PY AL L+ S + ALR A F+ +E + A + + LL ++E G D VAR LH L +C +GR EEAE +R+L I
Sbjct: 24 VRIPTTAPRIRDRFVERGEVISQVCSLLGIEDHTTAYPAEMKVVGLAGAGGSGKSTVASMVIRREDVRAFFPGGVLWLSVGQRAGRDRLLELLTSLAGMVYETVFQKRCRPLRKGVIGTDDEDPAAYIQCLQVERPRRFLVVADDVWQTEVLDELRRASVWGVLYTSRNTDLLPRAPVVLLDQLDREEAEMVLRNAAELAKDACLPEAAYDLMRRCEYAALDLDFVGRWSRTRRRTSELAWRGALDCIVDAQTRGE-----GRLPLSWRAAVLHTGLEELAGENSANRELYLALAVIPRGQPFPPDVAAVLLYGDGRSGEE---KEDREEAKNIFETLERWSIITRVGGGWYRVHDEHTDFIRASFAANQHARNTTLIR-WRRYMSSVSALVTLSEDWLSEGWNVLAEAQGEPVPSQPYLEALGGLAPSSADRPMALRTAASFYRDREQWMPASDYFSQLLIIQEHTAGVDSVVVARTLHELGLCVYMSGRAEEAELRLKRALRI 519
BLAST of mRNA_H-elongata_contig52923.12617.1 vs. uniprot
Match: D8LT49_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT49_ECTSI) HSP 1 Score: 344 bits (883), Expect = 3.490e-97 Identity = 218/522 (41.76%), Postives = 306/522 (58.62%), Query Frame = 1
Query: 10 PAAAPLIRPWYVERTNSIAESCARLGIQS-----VDQKPRVVGLSGPSGAGKSTVASMVIAREDVQAFF-RNGVLWLPVGRGAKNRIPALTLQLASMVYEDVLERAC------RPPRKADVGIEPEDGVAYIREMVV--EVDR------RLLVVVDDVWEEEVLHELQKIGAWVLYTSR-----VAGLLDDAPLRLDQVQTEEAEAVLRRAAELEDETRLPETAHELIRRSEFLVMDLAFVGRWGAVRMKSSSEAWKEVLDCIERARDGNDDDDDPGKHLPWRTAVLRAGLEELELDDALNIELYLSLAVLPDGLVFGTEEVSALLYGDDETSPSCSSPKALEAASAVAANLERWSIFTLEDGGRYRVHDLHAEFIKERAARSPTARRDKAARRWKEHVSTVDALLTWSGAELADIWRTLEKLN---GASVGPRPYGSALETLSSSDSSSRDALRRLAHFHYLKEDYEGAYEANTALLKMEEEELGRDHPDVARALHNLAVCASEAGRTEEAEGLYERSLAI 1491
PA APL++ W+++R +A C RLG+ +P VVG++GPSGAGKST+ASM++AR DV+ F + GV+WL VG+GA++R+ + +LA MV+E + RPPR D+G+EPEDG AY+RE++ E +R LLVV DDVWE EVL EL+ GA +LYT+R +A + LR+D+V EAE +LRRAA L D ++LP+ AH++IRR + MD+A+VGRW VR K+ AW VL + A++ LPWR+AVLR G+ L L D ELYLSL VLP L F ++V+AL+ S S + L+AA+ A LE+WS+ +GGRYRVH HA+ + + P A A RW+ VST +A+LTW EL DIW T+ L GA +PY ++ + SD+ + LRR+A F +L + + A + + LL E+ +HPDV ++ L A +GRT EAEG + R+LAI
Sbjct: 261 PAEAPLLQDWFIQREPVVAAICDRLGVNDRGRSRASGEPPVVGVAGPSGAGKSTIASMIVARHDVRGHFSQKGVVWLSVGQGARDRLLDVMYRLAVMVHELADSSSSPDDGPFRPPRTPDIGVEPEDGAAYVREILAADEGERSSGGFGELLVVADDVWEAEVLAELRNTGASILYTTRSEEDLLAASGGSSVLRVDEVTEGEAEELLRRAAALLDYSKLPDAAHDIIRRGGSVAMDVAYVGRWDIVRGKNDQAAWAAVLAHVIDAQNFMKG----AALLPWRSAVLRVGVTRLGLADQGTKELYLSLGVLPRNLSFSVDDVTALV--------SDGSAEELQAATLAMATLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDP-AILGPALARWRNRVSTAEAVLTWRTEELVDIWETIWSLEIGEGAEDIGQPYAETVDAMDLSDAGAFQLLRRIAFFQWLTNEPDAACMSWSKLLASGEDSAA-NHPDVHVTMYTLGAHALISGRTPEAEGWFRRTLAI 768
BLAST of mRNA_H-elongata_contig52923.12617.1 vs. uniprot
Match: A0A6H5JI56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI56_9PHAE) HSP 1 Score: 341 bits (874), Expect = 9.130e-96 Identity = 214/523 (40.92%), Postives = 304/523 (58.13%), Query Frame = 1
Query: 10 PAAAPLIRPWYVERTNSIAESCARLGIQS-----VDQKPRVVGLSGPSGAGKSTVASMVIAREDVQAFF-RNGVLWLPVGRGAKNRIPALTLQLASMVYEDVLERAC-------RPPRKADVGIEPEDGVAYIREMVV--EVDR------RLLVVVDDVWEEEVLHELQKIGAWVLYTSR-----VAGLLDDAPLRLDQVQTEEAEAVLRRAAELEDETRLPETAHELIRRSEFLVMDLAFVGRWGAVRMKSSSEAWKEVLDCIERARDGNDDDDDPGKHLPWRTAVLRAGLEELELDDALNIELYLSLAVLPDGLVFGTEEVSALLYGDDETSPSCSSPKALEAASAVAANLERWSIFTLEDGGRYRVHDLHAEFIKERAARSPTARRDKAARRWKEHVSTVDALLTWSGAELADIWRTLEKLN---GASVGPRPYGSALETLSSSDSSSRDALRRLAHFHYLKEDYEGAYEANTALLKMEEEELGRDHPDVARALHNLAVCASEAGRTEEAEGLYERSLAI 1491
PA APL++ W+++R +A C RLG+ +P VVG++GPSGAGKST+ASM+IAR DV+ F ++WLPVG+GA++R+ + +LA MV+E V+ + RPP+ D+G+EPEDG AY+RE++ E +R LLVV DD+WE EVL EL+ GA +LYT+R +A LR+D+V EAE +LRRAA+L D T+LP+ AH++IRR + MD+A+VGRW VR + AW VL + A++ LPWR+AVLR GL L L D ELYLSL VLP L F +V+AL+ S S + L+AA+ LE+WS+ +GGRYRVH HA+ + + P A A RW+ VST +A+L W EL DIW+ + L GA+ +PY ++ ++ SD+ + LRR+A F ++ + + A + + LL E+ D PDV ++ L A +GRT EAEG + R+LAI
Sbjct: 305 PAEAPLLQDWFIQREPVVAAICDRLGVNDRGGSRASGEPPVVGVAGPSGAGKSTIASMIIARNDVRGHFSEKRIVWLPVGQGARDRLLDVMYRLAVMVHELVVNSSSFPDDGPFRPPQPPDIGVEPEDGAAYVREILTADEGERSSGGFGELLVVADDIWEAEVLAELRSTGASILYTTRSEEDLLAASGGSDVLRVDEVTEGEAEEILRRAADLLDHTKLPDAAHDIIRRGGPVAMDVAYVGRWDIVRGNNDQAAWAVVLAHVIDAQNFMKG----AALLPWRSAVLRVGLTRLGLADQGTKELYLSLGVLPRNLSFSVGDVTALV--------SDGSAEELQAATLAITTLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDP-ATLGSALARWRNRVSTAEAVLAWRTEELVDIWQAIWSLEIGEGAAEIGQPYSEIVDAMNLSDAGAFQLLRRIAFFQWMTNEPDAACMSWSKLLASGEDSAAND-PDVHAIMYTLGAHALVSGRTHEAEGWFRRTLAI 813
BLAST of mRNA_H-elongata_contig52923.12617.1 vs. uniprot
Match: A0A6H5JK89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK89_9PHAE) HSP 1 Score: 307 bits (787), Expect = 1.350e-83 Identity = 220/570 (38.60%), Postives = 313/570 (54.91%), Query Frame = 1
Query: 1 ISFPAAAPLIRPWYVERTNSIAESCARLGIQSVD--------QKPRVVGLSGPSGAGKSTVASMVIAREDVQAFFRNGVLWLPV-GRGAKNRIPALTLQLASMVYEDVLE--------RACRPPRK-ADVGIEPEDGVAYIREMV-------VEVDR------------RLLVVVDDVWEEEVLHELQKIGAWVLYTS-RVAGLL--------------DDAP-LRLDQVQTEEAEAVLRRAAELEDETRLPETAHELIRRSEFLVMDLAFVGRWGAVRMKSSSEAWKEVLDCIERARDGNDDDDDPGKHLPWRTAVLRAGLEEL-ELDDALNIELYLSLAVLPDGLVFGTEEVSALLYGDDETSPSCSSPKA----LEAASAVAANLERWSIFTLEDGGRYRVHDLHAEFIKERAARSPTARRDKAARRWKEHVSTVDALLTWSGAELADI-WRTLEKLNGASVGPRPYGSALETLSSSDSSSRDA-LRRLAHFHYLKEDYEGAYEANTALLKMEEEELGRDHPD-------------VARALHNLAVCASEAGRTEEAEGLYERSLAI 1491
+ P+ AP I+ WY+ R+ ++ + CARLG+ S ++PR+VGL+GP+G GKSTV S+V+AREDV+A+FR+G++WLPV G+GA++R+P L L LA+MVYE +L+ + RPPR V + E+G AYIR + E D R L+V DDV+E EVL ELQ IGAWVLYT+ R A + D A LRLD + E E VLRRA+ L+ E LP+ A +LI+ +VMDLA++GRWG VR + ++AW+ L+ + +G D + + W TAVL AG+ +L L+D +LYLSLAVLP GL F + +ALL+G + + + KA L A V LER S+ LE+GGRY +H HA+F++E + P +R+ +A RW+EH ST AL W + I W L + P PY + L+ + SD+ + A L R+A L + EGA+ T L+ + E L R+ +A LHNL + A G TEEA + R+ +I
Sbjct: 239 VKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVGDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETILKSGEASWSSKKLRPPRTPGGVACDRENGAAYIRGALGITFPGREEGDGGGGSHEQRRWRPRYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLAYIGRWGVVRGTTDAKAWEAALNSV--FLEGGDGGQEWTRRR-WHTAVLFAGMADLARLNDKAK-DLYLSLAVLPKGLSFTPTDAAALLFGGGGDTKATQAAKAATPDLGAVMEVLGVLERCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRK-RALGRWREHTSTPAALFAWPVEDSVRIQWALLSLDDAVESPPPPYDAMLDGMDQSDADTFSAVLERVAQVQALAGNLEGAHAKYTRLVGVTESRLEREAAGGGDSIRQAGAELLLADRLHNLGMIAGGLGSTEEAFACHGRARSI 803
BLAST of mRNA_H-elongata_contig52923.12617.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 277 bits (709), Expect = 5.300e-75 Identity = 188/506 (37.15%), Postives = 282/506 (55.73%), Query Frame = 1
Query: 10 PAAAPLIRPWYVERTNSIAESCARLGIQSVDQKPRVVGLSGPSGAGKSTVASMVIAREDVQAFFRNGVLWLPVGRGAKNRIPALTLQLASMVYEDVLERACRPPRKADVGIEPEDGVAYIREMVVE--VDRRL--LVVVDDVWEEEVLHELQKIGAWVLYTSRVAGLLDDA---PLRLDQVQTEEAEAVLRRAAELEDETRLPETAHELIRRSEFLVMDLAFVGRWGAVRMKSSSEAWKEVLDCI--ERARDGNDDDDDPGKHLPW--RTAVLRAGLEELEL--DDALNIELYLSLAVLPDGLVFGTEEVSALLYGDDETSPSCSSPKALEAASAVAANLERWSIFTLEDGGRYRVHDLHAEFIKERAARSPTARRDKAARRWKEHVSTVDALLTWSGAELADIWRTLEKLNGASVGP-RPYGSALETLSSSDSSSRDALRRLAHFHYLKEDYEGAYEANTALLKMEEEELGRDHPDVARALHNLAVCASEAGRTEEAEGLYERSL 1485
P AP+ + W+VER +++A L + + VV L+G SG+GK+TVA+ ++ +V+ F +G++WLPV GAK R+P+L LQLA MV+E++ R P + ED YI++ + E RRL LVV D+VWEE+V+ +L + G WVL ++R ++ + + +D++ +AE+VL+RAAEL E+RLP+ A +LI+ + MD+AFVGRW VR + +W + I E + G+D D+D +++P R A+L+ G E+L + DD LYLSLAV+PDG F ++ + LLY + SPS + A V LERWSI G YR+HD H +F +E RR A +RW ++S++D L + L +W +E+L G G RPY AL + SD+ R + F +ED EGA + LL++E+ ELG DHP V NLA+ A G EEA +E+ +
Sbjct: 181 PMGAPVRKSWHVERRHAMATVLDAL---NGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSAS------EDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLY---DRSPSTEDEAS---AGGVVDVLERWSIIRSAQG-TYRMHDAHTDFARECLLDRGHVRRP-ALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEKEV 669
BLAST of mRNA_H-elongata_contig52923.12617.1 vs. uniprot
Match: D7G2X0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X0_ECTSI) HSP 1 Score: 276 bits (706), Expect = 3.760e-74 Identity = 204/525 (38.86%), Postives = 282/525 (53.71%), Query Frame = 1
Query: 115 VVGLSGPSGAGKSTVASMVIAREDVQAFFRNGVLWLPV-GRGAKNRIPALTLQLASMVYEDVLE--------RACRPPRK-ADVGIEPEDGVAYIREMV-------VEVDR------------RLLVVVDDVWEEEVLHELQKIGAWVLYTS-RVAGLL------------------DDAP-LRLDQVQTEEAEAVLRRAAELEDETRLPETAHELIRRSEFLVMDLAFVGRWGAVRMKSSSEAWKEVLDCI--ERARDGNDDDDDPGKHLPWRTAVLRAGLEEL-ELDDALNIELYLSLAVLPDGLVFGTEEVSALLYGDDETSPSCSSPKALEAASAVAANLERWSIFTLEDGGRYRVHDLHAEFIKERAARSPTARRDKAARRWKEHVSTVDALLTWSGAELADIWRTLEKLNGASVGPRPYGSALETLSSSDSSSRDA-LRRLAHFHYLKEDYEGAYEANTALLKMEEEELGRDHPD-------------VARALHNLAVCASEAGRTEEAEGLYERSLAI 1491
+VGL+GP+G GKSTV S+V+AREDV+A FR+G++WLPV G+GA++R+P L L LA+MVYE VL+ + RPPR V + E+G AYIR + E D R L+V DDV+E EVL ELQ IGAWVLYT+ R A + D A LRLD + E E VLRRA+ L+ E LP+ A +L + +VMDLA++GRWG V + +AW+ L+ + E G + W TAVL AG+ +L L+D +LYLSLAVLP GL F + +ALL+G D + ++P L A V LE+ S+ LE+GGRY +H HA+F++E + P +R+ +A RW+EH ST AL W + I L L+ A P PY + L+ + SD+ + A L R+A L + EGA+ T L+ + E L R+ +A LHNL + A G TEEA + R+ +I
Sbjct: 1 MVGLAGPTGCGKSTVTSLVVAREDVRAHFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASWSSKKLRPPRTPGGVACDRENGAAYIRGALGITRPGGEEGDGGGESHEQRRWRPRYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDXXXXXXXGDHADVLRLDNISDAEGETVLRRASGLDPEAELPQPALDLFKSYGSVVMDLAYIGRWGVVHGTTDVKAWEVALNSVFLEGGEGGQE-----WTRRRWHTAVLFAGMADLARLNDKAK-DLYLSLAVLPKGLSFTPADAAALLFGGDTKAAKAATPD-LGAVMEVLGVLEQCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRK-RALGRWREHASTPAALFAWPVEDSVRIQWALSSLDDAVEPPPPYDAMLDGMDQSDADTFSAVLERVAQVQALAGNLEGAHAKYTRLVVVTESRLEREAAGGGDSISQAGAELLLADRLHNLGMIAGGLGSTEEAFACHGRARSI 517
BLAST of mRNA_H-elongata_contig52923.12617.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 257 bits (656), Expect = 8.860e-68 Identity = 184/509 (36.15%), Postives = 261/509 (51.28%), Query Frame = 1
Query: 10 PAAAPLIRPWYVERTNSIAESCARLGIQSVDQKPRVVGLSGPSGAGKSTVASMVIAREDVQAFFRNGVLWLPVGRGAKNRIPALTLQLASMVYEDVLERACRPPRKADVGIEPEDGVAYIREMVVE----VDRRLLVVVDDVWEEEVLHELQKIGAWVLYTSRVAGLLDDAP---LRLDQVQTEEAEAVLRRAAELEDETRLPETAHELIRRSEFLVMDLAFVGRWGAVRMKSSSEAWKEVLDCIERAR--------DGNDDDDDPGKHLPWRTAVLRAGLEELEL--DDALNIELYLSLAVLPDGLVFGTEEVSALLYG-----DDETSPSCSSPKALEAASAVAANLERWSIFTLEDGGRYRVHDLHAEFIKERAARSPTARRDKAARRWKEHVSTVDALLTWSGAELADIWRTLEKLNGAS-VGPRPYGSALETLSSSDSSS-RDALRRLAHFHYLKEDYEGAYEANTALLKMEEEELGRDHPDVARALHNLAVCASEAGRTEEAE 1464
P P + W+VER N L D P +VGL G SGAGK+T AS +++ V+ F +G++WLPV G + +P L LQLA MV+ED+ R P +D DG+AY+++ V + LVV D+VWE +V+ +L + G W+L ++R L+ A + +D++ EAE+VLRRAAEL E RLP+ A +LI + MDLAFVGRW VR + AW + C RA + N +D + R A+L+AG E+L + DD LYLSLAVLPDG F ++ + LLY +DE S V LERW+I + YR+HD H+ F +E RR A +R +S+++AL + + L +W ++++ G RPY ALE L S+S R+ + +A F +ED+ GA LL +EE +LG DHP V H LA CA EEA+
Sbjct: 204 PKGTPTHKSWHVERRNVTETVFQAL---DADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSD------DGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAA-CKVRAEMDKGGVTAESNGSED---SRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEAS-----------VGGVVEALERWTIIRSVEA-TYRMHDAHSNFARESLMDRGDVRRP-AIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAK 686 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52923.12617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig52923.12617.1 >prot_H-elongata_contig52923.12617.1 ID=prot_H-elongata_contig52923.12617.1|Name=mRNA_H-elongata_contig52923.12617.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=808bp MVIAREDVQAFFRNGVLWLPVGRGAKNRIPALTLQLASMVYEDVLERACRback to top mRNA from alignment at H-elongata_contig52923:94..3115- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig52923.12617.1 ID=mRNA_H-elongata_contig52923.12617.1|Name=mRNA_H-elongata_contig52923.12617.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3022bp|location=Sequence derived from alignment at H-elongata_contig52923:94..3115- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig52923:94..3115- >mRNA_H-elongata_contig52923.12617.1 ID=mRNA_H-elongata_contig52923.12617.1|Name=mRNA_H-elongata_contig52923.12617.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4848bp|location=Sequence derived from alignment at H-elongata_contig52923:94..3115- (Himanthalia elongata Himel1 dioecious)back to top |