mRNA_H-elongata_contig52884.12611.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig52884.12611.1 vs. uniprot
Match: A0A6H5KK91_9PHAE (Abhydrolase_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KK91_9PHAE) HSP 1 Score: 319 bits (818), Expect = 1.100e-105 Identity = 145/209 (69.38%), Postives = 177/209 (84.69%), Query Frame = 3
Query: 6 GVYKNVVVWLHGLGDTADGWSGSMSALGVADTKFILPTADIRPISLNGGMKMNGWTDITGLSEDAVEDSTGFSASNDRVRALLELEKSKGKELSRMVVGGFSQGGAVALHTCLRFTEKIAGCVACSSWVPLNKEYPSALGSAAKDIPIAQFHGTRDDIVRFTWGQHSHHLLKDKLGIAATFQAIPGMGHSACEEELEEIGKFLRKILPE 632
G Y NVVVWLHGLGDTA GW+ M L + +TKFILPTAD RPI+LNGG +M GW+DI GL ED+ ED+ GF+AS DRVRA+LE EK+KGKE +RMVVGGFSQGGAVALH CLR TE +AGCVACS+W+PLNK+YP+ALGSAAKDIP+AQFHGTRD++V+FTWGQHSH L+K+KLG+ TF+AI GMGHS+ E+E + FL+++LP+
Sbjct: 73 GAYTNVVVWLHGLGDTAAGWASMMPQLKLPNTKFILPTADTRPITLNGGYEMPGWSDIFGLQEDSPEDAVGFNASADRVRAILEAEKAKGKESTRMVVGGFSQGGAVALHFCLRATEPLAGCVACSTWIPLNKDYPTALGSAAKDIPVAQFHGTRDEVVQFTWGQHSHILMKEKLGMTTTFEAITGMGHSSSNAEMESVADFLKRVLPD 281
BLAST of mRNA_H-elongata_contig52884.12611.1 vs. uniprot
Match: A0A6V1K3U7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K3U7_HETAK) HSP 1 Score: 215 bits (547), Expect = 1.660e-64 Identity = 106/206 (51.46%), Postives = 141/206 (68.45%), Query Frame = 3
Query: 12 YKNVVVWLHGLGDTADGWSGSMSALGVADTKFILPTADIRPISLNGGMKMNGWTDITGLSEDAVEDSTGFSASNDRVRALLELEKSKGKELSRMVVGGFSQGGAVALHTCLRFTEKIAGCVACSSWVPLNKEYPSALGSAAKD-IPIAQFHGTRDDIVRFTWGQHSHHLLKDKLGIA-ATFQAIPGMGHSACEEELEEIGKFLRKI 623
Y NVVVW HGLGDTA GW +M A G+ TKFILPTA RPI+LN GM M GW+DI GL ++ ED GF S R+ +++ E KG S++VVGGFSQGGA+AL+ L+ T IAGCV SSW+PL+ ++P+A+ AA+ + I Q HG D++VR WG+ SH +K +LG A A ++ PGM HSAC+EEL+ +FL+ +
Sbjct: 93 YTNVVVWNHGLGDTAMGWYSAMPAFGLTKTKFILPTAPTRPITLNMGMAMPGWSDIRGLDKEDDEDEPGFEESRARIESIVRSEVDKGISPSKIVVGGFSQGGALALYYSLQNTHGIAGCVGFSSWLPLSAKFPAAVSDAARGGLKILQCHGDADEVVRTAWGKLSHEKIKGELGFADAAWEEYPGMAHSACDEELQRCAEFLKGL 298
BLAST of mRNA_H-elongata_contig52884.12611.1 vs. uniprot
Match: A0A7S2SSS9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSS9_9STRA) HSP 1 Score: 213 bits (542), Expect = 5.140e-64 Identity = 107/205 (52.20%), Postives = 141/205 (68.78%), Query Frame = 3
Query: 6 GVYKNVVVWLHGLGDTADGWSGSMSALGVADTKFILPTADIRPISLNGGMKMNGWTDITGLSEDAVEDSTGFSASNDRVRALLELEKSKGK-ELSRMVVGGFSQGGAVALHTCLRFTEKIAGCVACSSWVPLNKEYPSALGSAAKDIPIAQFHGTRDDIVRFTWGQHSHHLLKDKLGIA-ATFQAIPGMGHSACEEELEEIGKFL 614
G + VV+W+HGLGDTA GW ++ L K +LPTA+ RPI+LNGGM M GW DI GL A ED+ G + S+ RVR ++E E +G +++GGFSQGGAVALHT LR ++ GCVA S+W+PL +EYP ALGSAA+D+ + HGT D +VR +WG+ SH L + LGIA +++ GM HSACE+ELE+I KFL
Sbjct: 66 GGHDGVVIWMHGLGDTAMGWYQALWGL-APRMKIVLPTAETRPITLNGGMSMPGWFDIVGLDSSAPEDAEGMAESSARVRRIMEKEMEEGGLGPEAVIIGGFSQGGAVALHTALRADVQLGGCVAASTWLPLREEYPGALGSAAQDLRVLFCHGTEDPVVRPSWGRGSHDFLIENLGIANVSWREYEGMPHSACEDELEDIRKFL 269
BLAST of mRNA_H-elongata_contig52884.12611.1 vs. uniprot
Match: A0A836CN32_9STRA (Lysophospholipase-like protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN32_9STRA) HSP 1 Score: 210 bits (535), Expect = 9.560e-64 Identity = 106/204 (51.96%), Postives = 133/204 (65.20%), Query Frame = 3
Query: 12 YKNVVVWLHGLGDTADGWSGSMSALGVADTKFILPTADIRPISLNGGMKMNGWTDITGLSEDAVEDSTGFSASNDRVRALLELEKSKGKELSRMVVGGFSQGGAVALHTCLRFTEKIAGCVACSSWVPLNKEYPSALGSAAK-DIPIAQFHGTRDDIVRFTWGQHSHHLLKDKLGIAATFQAIPGMGHSACEEELEEIGKFLRK 620
Y NVV+W+HGLGDTAD V+ FILPTA RPISLNGG M GWTD+ GL E + ED GF S R++AL++ EK+KG R+VV GFSQGGA ALH LR + + GCVACS W+PL KEYP+ALG AK + + Q HG D +VR WG S++ LK +GIAA + GMGHSA +ELE + F+++
Sbjct: 25 YANVVIWMHGLGDTAD----------VSVLNFILPTAPTRPISLNGGFMMPGWTDVYGLDETSKEDKEGFEQSAARIQALIDSEKAKGIPAQRVVVAGFSQGGATALHVALRTKDALGGCVACSGWLPLAKEYPAALGDGAKAGLKVLQCHGDADVVVRHHWGSQSYNALK-AMGIAAELETYRGMGHSAIPDELERVSAFIQQ 217
BLAST of mRNA_H-elongata_contig52884.12611.1 vs. uniprot
Match: A0A7S0SWW0_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWW0_9STRA) HSP 1 Score: 209 bits (531), Expect = 2.450e-63 Identity = 100/204 (49.02%), Postives = 131/204 (64.22%), Query Frame = 3
Query: 6 GVYKNVVVWLHGLGDTADGWSGSMSALGVADTKFILPTADIRPISLNGGMKMNGWTDITGLSEDAVEDSTGFSASNDRVRALLELEKSKGKELSRMVVGGFSQGGAVALHTCLRFTEKIAGCVACSSWVPLNKEYPSALGSAAKDIPIAQFHGTRDDIVRFTWGQHSHHLLKDKL-GIAATFQAIPGMGHSACEEELEEIGKFL 614
G Y V+ W HGLGDTADGW+ + L + TK+ILPTA IRPI+LNGGM M GW+DI GL E + ED GF+ S +RV+A++ E S G S + +GGFSQGGA+ALH LR K+ GC+A SSW+P NK+YPS L ++K +PI Q HG D +V+F WG H+H L + + TF IP GH +E + F+
Sbjct: 2 GEYNRVLFWFHGLGDTADGWADLVPELNLEKTKYILPTAPIRPITLNGGMSMPGWSDIYGLDETSKEDLAGFNESAERVQAIVNQEISSGISASNIFIGGFSQGGALALHYSLRSPLKLGGCIAFSSWLPFNKDYPSVLSDSSKTLPIVQVHGDNDYVVQFKWGSHTHKFLSEIITNPPPTFVKIPKHGHGFHPDETNILKSFI 205
BLAST of mRNA_H-elongata_contig52884.12611.1 vs. uniprot
Match: C1E6T2_MICCC (Abhydrolase_2 domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E6T2_MICCC) HSP 1 Score: 186 bits (472), Expect = 2.970e-54 Identity = 92/210 (43.81%), Postives = 133/210 (63.33%), Query Frame = 3
Query: 3 GGVYKNVVVWLHGLGDTADGWSGSMSALGVADTKFILPTADIRPISLNGGMKMNGWTDITGLSEDAVEDSTGFS-ASNDRVRALLELEKSKGKELSRMVVGGFSQGGAVALHTCLRFTEKIAGCVACSSWVPLNKEYPSALGSAAKDIPIAQFHGTRDDIVRFTWGQHSHHLLKDKLGIAAT-FQAIPGMGHSACEEELEEIGKFLRKIL 626
GG V ++LHGLGDT GW+ S++ K+I PTA PI+LNGGM+M GW DI LS D ++D + AS + V+ L++ E G R+VVGGFSQGG +AL T LRF E++AG V S+++ L +++P A+ AKD+P+ HGT D ++++ +G S L+ LG+ FQ GMGHSAC+EEL+++ KF+ +L
Sbjct: 16 GGATTAVCIFLHGLGDTGHGWADVASSMPFEGVKWIFPTAPTIPITLNGGMRMTGWYDINDLSIDNIKDDRAQTLASTEYVQGLIKAEIDGGVNADRIVVGGFSQGGVIALQTALRFPERLAGAVGMSTYLALREDFPDAMSPHAKDLPVFLAHGTADMVLQYQYGVMSSELMTGPLGMTKVDFQTYQGMGHSACQEELQQLAKFIANVL 225
BLAST of mRNA_H-elongata_contig52884.12611.1 vs. uniprot
Match: A0A7S0KRY7_MICPS (Hypothetical protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KRY7_MICPS) HSP 1 Score: 187 bits (476), Expect = 5.260e-54 Identity = 93/210 (44.29%), Postives = 133/210 (63.33%), Query Frame = 3
Query: 3 GGVYKNVVVWLHGLGDTADGWSGSMSALGVADTKFILPTADIRPISLNGGMKMNGWTDITGLSEDAVEDSTGFS-ASNDRVRALLELEKSKGKELSRMVVGGFSQGGAVALHTCLRFTEKIAGCVACSSWVPLNKEYPSALGSAAKDIPIAQFHGTRDDIVRFTWGQHSHHLLKDKLGIAAT-FQAIPGMGHSACEEELEEIGKFLRKIL 626
GG V ++LHGLGDT GWS S++ K+I PTA PI+LNGGM+M GW DI LS D ++D + AS + V+ L++ E +G R+VVGGFSQGG +AL T LRF E++AG V S+++ L +++P A+ AKD+P+ HGT D ++++ +G S L+ LG+ FQ GMGHSAC+EEL+ + KF+ +L
Sbjct: 82 GGATTAVCIFLHGLGDTGHGWSDVASSMPFEGVKWIFPTAPTIPITLNGGMRMTGWYDINDLSIDNIKDDRAQTLASTEYVQGLIKAEIDRGVAADRIVVGGFSQGGVIALQTALRFPERLAGAVGMSTYLALREDFPDAMSVHAKDLPVFLAHGTADAVLQYDYGVMSRELMTGGLGMTKVDFQTYQGMGHSACQEELQHLAKFIANVL 291
BLAST of mRNA_H-elongata_contig52884.12611.1 vs. uniprot
Match: A0A4D9D0F4_9STRA (Abhydrolase_2 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0F4_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.350e-53 Identity = 88/207 (42.51%), Postives = 124/207 (59.90%), Query Frame = 3
Query: 3 GGVYKNVVVWLHGLGDTADGWSGSMSALGVADTKFILPTADIRPISLNGGMKMNGWTDITGLSEDAVEDSTGFSASNDRVRALLELEKSKGKELSRMVVGGFSQGGAVALHTCLRFTEKIAGCVACSSWVPLNKEYPSALGSAAKDIPIAQFHGTRDDIVRFTWGQHSHHLLKDKLGIAATFQAIPGMGHSACEEELEEIGKFLRKI 623
GG ++ ++W+HGLGD+ +GW+G+ T+ I PTA RPI+LNGG M GW DI GL E + ED GF + R+ +++ E G ++V+GGFSQGGAV LH LR ++ G V S W+PL +YP+AL K +P HG D IVR WGQHS LK+ LG+ TF+ G+ H A EE+++ F+++I
Sbjct: 69 GGPAQSSIIWMHGLGDSGEGWAGAFDPKVFPTTRMIFPTAPTRPITLNGGFPMPGWFDINGLDESSPEDRAGFEEAKQRIARIVQGEVEAGVPADKIVLGGFSQGGAVTLHLALRSEVRLGGAVILSGWLPLKADYPAALTEVGKAMPYFHGHGDADGIVRHQWGQHSAEKLKE-LGLNYTFKTYRGLDHGATPEEMKDAVAFMKEI 274
BLAST of mRNA_H-elongata_contig52884.12611.1 vs. uniprot
Match: T1KU75_TETUR (Palmitoyl-protein hydrolase n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1KU75_TETUR) HSP 1 Score: 181 bits (460), Expect = 1.700e-52 Identity = 93/209 (44.50%), Postives = 128/209 (61.24%), Query Frame = 3
Query: 6 GVYKNVVVWLHGLGDTADGWSGSMSALGVADTKFILPTADIRPISLNGGMKMNGWTDITGLSEDAVEDSTGFSASNDRVRALLELEKSKGK-ELSRMVVGGFSQGGAVALHTCLRFTEKIAGCVACSSWVPLNKEYPSALGSAAKDIPIAQFHGTRDDIVRFTWGQHSHHLLKDKLGIAATFQAIPGMGHSACEEELEEIGKFLRKILP 629
G Y +++LHGLGDT GWS S+ A+ K I PTA PI+LNGGMKM W D+ LS D ED G +N V ++E E++K +R+++GGFSQGGA+ALHT LR + +AG +A S W+PL+KEYP+AL A K +PI Q HG D IV WG + +L+ L F+ PG+ HS+ EE+++ F+ + LP
Sbjct: 14 GKYTAAMIFLHGLGDTGQGWSDSIGAIIPPYCKLICPTAPSIPITLNGGMKMTSWFDLMALSADGPEDIEGIKKANSLVLKMIEEEEAKHSIPCNRILIGGFSQGGALALHTALRHPKSLAGVLAFSCWLPLHKEYPAALNQANKGVPIFQCHGDIDLIVPRIWGNKTADILRPLL-TTYNFKVYPGLAHSSSNEEMKDAAAFIARCLP 221
BLAST of mRNA_H-elongata_contig52884.12611.1 vs. uniprot
Match: UPI000E6E53E0 (acyl-protein thioesterase 1-like n=1 Tax=Ctenocephalides felis TaxID=7515 RepID=UPI000E6E53E0) HSP 1 Score: 176 bits (445), Expect = 2.730e-50 Identity = 83/205 (40.49%), Postives = 129/205 (62.93%), Query Frame = 3
Query: 12 YKNVVVWLHGLGDTADGWSGSMSALGVADTKFILPTADIRPISLNGGMKMNGWTDITGLSEDAVEDSTGFSASNDRVRALLELEKSKGKELSRMVVGGFSQGGAVALHTCLRFTEKIAGCVACSSWVPLNKEYPSALGSAAKDIPIAQFHGTRDDIVRFTWGQHSHHLLKDKLGIAATFQAIPGMGHSACEEELEEIGKFLRKIL 626
+ + V++LHGLGDT +GW+ +MS + TK ILPTA P+++N G KM W D+ GL+ + ED TG +AS +++ +L++ E + G +R+V+GGFSQGG +AL+ LR T+ + G VA S W+P+ + +P + D+PI HG D +V + WGQ SH +L++ + F PG+ HS+ + EL +I FL +IL
Sbjct: 15 HTSTVIFLHGLGDTGNGWAAAMSEIKPPHTKVILPTAPTIPVTINAGAKMPSWFDLHGLNPNTPEDETGLNASTEKIHSLIDKEVASGIPSNRIVLGGFSQGGGLALYAGLRCTKSLGGIVALSCWLPMFRNFPDPNLKCSPDVPIFMCHGDCDPVVPYKWGQASHKVLRNFMN-NCEFHTYPGLMHSSNQTELNDIKSFLDRIL 218 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52884.12611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig52884.12611.1 >prot_H-elongata_contig52884.12611.1 ID=prot_H-elongata_contig52884.12611.1|Name=mRNA_H-elongata_contig52884.12611.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=187bp MSALGVADTKFILPTADIRPISLNGGMKMNGWTDITGLSEDAVEDSTGFSback to top mRNA from alignment at H-elongata_contig52884:341..3168+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig52884.12611.1 ID=mRNA_H-elongata_contig52884.12611.1|Name=mRNA_H-elongata_contig52884.12611.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2828bp|location=Sequence derived from alignment at H-elongata_contig52884:341..3168+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig52884:341..3168+ >mRNA_H-elongata_contig52884.12611.1 ID=mRNA_H-elongata_contig52884.12611.1|Name=mRNA_H-elongata_contig52884.12611.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1122bp|location=Sequence derived from alignment at H-elongata_contig52884:341..3168+ (Himanthalia elongata Himel1 dioecious)back to top |