mRNA_H-elongata_contig52846.12605.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig52846.12605.1 vs. uniprot
Match: D7FYB4_ECTSI (Fe_hyd_SSU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYB4_ECTSI) HSP 1 Score: 600 bits (1547), Expect = 4.460e-207 Identity = 357/570 (62.63%), Postives = 400/570 (70.18%), Query Frame = 1
Query: 1 MATVMLGDLDDFIAPGQACINPLFTTADD----VKAAAESENDGPGKASMQLVLEDDEGPVDAMNVVEEEAKPDLIRATGKQTAKVSLDDCLACSGCVTSAETVLITQQSTAKLRDVIDSRRYGVVVASISPQARASLADRFGLSTTETHARLLTFLR-REGIHHLVDSTLGADFSLLEAGDEFVQRYRKV------PEG--------------LYP--ASWSAPRPTVALSSTRRFNVEAGREEATPIGVAPSGNAGVARGQSRSAHDGNDAAPGLERTCGTEAGNLVR-PRGPGELLVLTSACPGWVCYAEKTAPEALPCVSAVKSPQQIMGVLTKRVFPRAWNIPSHP---AKPLGTAAA------RDSGRNTIGTNHDTAAR-SVDDRKP----SQRVFHVSIAQCYDKKLEASRKDFRHDDLDGDAEVDLVLTTVELLDLIEERAVARADANGGHPYADVSREGQEAAAGIFFRSHPLCNISEPLAPGFPATQAAATTDGLSLFGGIDGEGTAGGNSGGYLEYVFRYAALRLFGIDLAGQPLVYREGRNPDFWETALEVRGESSI 1584
MA+V+LGDLDDFIAPGQACINPLFTTA D AAAES G A+M L +EDD GP+DAM VEE KPDLIRA+ QTAKVSLDDCLACSGCVTSAETVLITQQST KLR+ + S RY VVVASI+PQARASLA+RFGLS ETHARLL FLR R G+HHLVDS+LGADFSLLEAG+EFVQR+R + PEG P A+W AP PTVALSSTRRFNVE G EE + G S G + + E G R PRGPGELLVLTSACPGWVCYAEKTAPEALP +S VKSPQQ+MGVL KRVFPRAWN P HP A TAAA RDS N T A ++D P S+ VFHVSIAQCYDKKLEASRKDFRH DLDGDAEVDLVLTT E+L+LIEE A A ADA + G++AA+ F R P +++EPLAPGFP QAA + DGLSLFGG+DGEG AGGNS GYLEYVFR+AA+ LFG+DLAG+PLVYREGRN DF ET+LEV G+ ++
Sbjct: 1 MASVLLGDLDDFIAPGQACINPLFTTAADSAPATAAAAESAG-SKGGAAMVLEIEDDRGPLDAM-AVEEVVKPDLIRASNTQTAKVSLDDCLACSGCVTSAETVLITQQSTGKLREAVASGRYSVVVASITPQARASLAERFGLSPAETHARLLAFLRERHGVHHLVDSSLGADFSLLEAGEEFVQRWRSINSGRSGPEGGRAKLGAAVGEGAPARPPLAAWVAPPPTVALSSTRRFNVELGEEEDNRMQQQRQGQVSNCASGVVSGKRGREGEEAARNSMAVEEGECARRPRGPGELLVLTSACPGWVCYAEKTAPEALPFMSTVKSPQQMMGVLAKRVFPRAWNHP-HPSVAAAAAVTAAADEVSRVRDSASNGATPAASTLANETLDQSTPPPVRSRGVFHVSIAQCYDKKLEASRKDFRHPDLDGDAEVDLVLTTAEVLELIEESASA-ADAT--LTSTSPASPGRDAASDYFRRHFPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSDGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVAL 564
BLAST of mRNA_H-elongata_contig52846.12605.1 vs. uniprot
Match: A0A835YWH5_9STRA (Iron hydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWH5_9STRA) HSP 1 Score: 294 bits (753), Expect = 1.080e-89 Identity = 212/537 (39.48%), Postives = 270/537 (50.28%), Query Frame = 1
Query: 1 MATVMLGDLDDFIAPGQACINPLFTTADDVKAAAESENDGPGKASMQLVLEDDEGPVDAMNVVEEEAKPDLIRATGKQTAKVSLDDCLACSGCVTSAETVLITQQSTAKLRDVIDSRRYGVVVASISPQARASLADRFGLSTTETHARLLTFLRREGIHHLVDSTLGADFSLLEAGDEFVQRYRKVPEGLYPASWSAPRPTVALSSTRRFNVEAGREEATPIGVAPSGNAGVARGQSRSAHDGNDAAPGLERTCGTEAGNLVRPRGPGELLVLTSACPGWVCYAEKTAPEALPCVSAVKSPQQIMGVLTKRVFPRAWNIPSHPAKPLGTAAARDSGRNTIGTNHDTAARSVDDRKPSQRVFHVSIAQCYDKKLEASRKDF-----------RHDDLDGDAEVDLVLTTVELLDLIEERAVARADANGGHPYADVSREGQEAAAGIFFRSHPLCNISEPLAPGFPATQAAATTDGLSLFGGIDGEGTAGGNSGGYLEYVFRYAALRLFGIDLA-GQPLVYREGRNPDFWETALEVRGE 1575
MA+V LGDLDDFIAP QAC+NPLF K AA + N G +M+LVLED+ + + ++ +PDLI+ + +TA VSL+DCLACSGCVTSAETVLI+QQS+ +L + + + V VAS+SPQ+RAS+AD FGLS + AR+ TFL + G+ H +D+ D L+ A DEF+ R R P W+AP P+VA+S T + R+ AT G E+ N + RGP LLV SACPG+VCY EKTAPEAL VSAVKSPQ G L K RAW G A A V H+S+ C+D+KLEASR DF A+VD+VL+T ELL++ A +FRS + LAPG P T +G +L AGG SGGY E+VFR+AA L G+D+ G PL YR+GRN D E LEV GE
Sbjct: 1 MASVFLGDLDDFIAPSQACVNPLFAAPASDKPAAIAGN---GADAMELVLEDEFETLAPQVLPPQQQEPDLIKTSASKTATVSLNDCLACSGCVTSAETVLISQQSSGRLLSALRDKSFAVSVASLSPQSRASIADYFGLSPAQAQARIATFLAQLGVTHTIDAACAGDLCLVAARDEFIARARSP----LPPVWTAPAPSVAVSRTTQ------RDAAT----------------------------------GAESFNAPQLRGPLPLLV--SACPGFVCYVEKTAPEALAYVSAVKSPQAAAGALVKGAAARAW----------GVAPAA--------------------------VLHLSVQPCFDRKLEASRLDFVDTVAAEXXXXXXXXXXPTADVDIVLSTSELLEM----------------------------AAQYFRSLAPAPPAPELAPGIPLPPP--TPEGAALASAD----AAGGASGGYAEHVFRHAAKVLHGVDIPQGAPLQYRQGRNVDMRELVLEVGGE 418
BLAST of mRNA_H-elongata_contig52846.12605.1 vs. uniprot
Match: A0A8K1CNM2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNM2_PYTOL) HSP 1 Score: 279 bits (713), Expect = 5.430e-84 Identity = 191/528 (36.17%), Postives = 263/528 (49.81%), Query Frame = 1
Query: 1 MATVMLGDLDDFIAPGQACINPLFTTADDVKAAAESENDGPGKASMQLVLEDDEGPVDAMNVVEEEAKPDLIRATGKQTAKVSLDDCLACSGCVTSAETVLITQQSTAKLRDVIDSRRYGVVVASISPQARASLADRFGLSTTETHARLLTFLRREGIHHLVDSTLGADFSLLEAGDEFVQRYRKVPEGLYPASWSAPRPTVALSSTRRFNVEAGREEATPIGVAPSGNAGVARGQSRSAHDGNDAAPGLERTCGTEAGNLVRPRGPGELLVLTSACPGWVCYAEKTAPEALPCVSAVKSPQQIMGVLTKRVFPRAWNIPSHPAKPLGTAAARDSGRNTIGTNHDTAARSVDDRKPSQRVFHVSIAQCYDKKLEASRKDFRHDDLDGDAEVDLVLTTVELLDLIEERAVARADANGGHPYADVSREGQEAAAGIFFRSHPLCNISEPLAPGFPATQAAATTDGLSLFGGIDGEGTAGGNSGGYLEYVFRYAALRLFGIDLAGQPLVYREGRNPDFWETALEVRGESSI 1584
MA+V LGDLDD+I PGQAC+NPLFT A + N+G K S+ + + + VEE +P++IR T K+ A +SLDDCLACSGCVTSAETVLI+QQS +L DV+ S+R+ VV ++SPQ+RASLA+ F L TH +L+T R+ G+ ++DST DF+LLE+ EF+ RYR + +W+ P ++A+SST VE PI T L P + +L S+CPGW+CYAEKT P A+P + KSPQQI G L K + R+ G N + V+HV++ C+DKKLEASRKDF D+ +VD VL T E++DL+ V+ D AD E L G ++D ++ G +SGG+LE++FR+AA LF +++ G PL Y GRNPDF E +L V G+ +
Sbjct: 1 MASVFLGDLDDYIQPGQACVNPLFTGPTTTDANGSTTNNGVAKISLDMEMSSSDW------AVEETVRPNIIRTTAKEKATISLDDCLACSGCVTSAETVLISQQSFQELLDVLASKRFKHVVVTVSPQSRASLAEHFELPVIVTHRKLVTLFRKLGVDMVIDSTSSGDFALLESRAEFLHRYRNQQK----TTWTRPPSSIAVSSTNTEFVE-------PI---------------------------------TATNPLQDPLRA--MPMLASSCPGWICYAEKTQPNAIPFIDTTKSPQQIAGALVKHLV------------------GREKGFN------------------ANEVYHVTVMPCFDKKLEASRKDFL-DEATEAKDVDCVLATTEVIDLMNSLGVSFTDLELAELTAD-----------------------EILLSG-------VSSDASTILGS-----NVNASSGGHLEHIFRFAAKELFNVEVQG-PLEYVVGRNPDFREVSLVVDGQDVL 403
BLAST of mRNA_H-elongata_contig52846.12605.1 vs. uniprot
Match: K3WYN8_GLOUD (Fe_hyd_SSU domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYN8_GLOUD) HSP 1 Score: 275 bits (704), Expect = 1.230e-82 Identity = 197/531 (37.10%), Postives = 266/531 (50.09%), Query Frame = 1
Query: 1 MATVMLGDLDDFIAPGQACINPLFTTADDVKAAAESENDGP---GKASMQLVLEDDEGPVDAMNVVEEEAKPDLIRATGKQTAKVSLDDCLACSGCVTSAETVLITQQSTAKLRDVIDSRRYGVVVASISPQARASLADRFGLSTTETHARLLTFLRREGIHHLVDSTLGADFSLLEAGDEFVQRYRKVPEGLYPASWSAPRPTVALSSTRRFNVEAGREEATPIGVAPSGNAGVARGQSRSAHDGNDAAPGLERTCGTEAGNLVRPRGPGELLVLTSACPGWVCYAEKTAPEALPCVSAVKSPQQIMGVLTKRVFPRAWNIPSHPAKPLGTAAARDSGRNTIGTNHDTAARSVDDRKPSQRVFHVSIAQCYDKKLEASRKDFRHDDLDGDAEVDLVLTTVELLDLIEERAVARADANGGHPYADVSREGQEAAAGIFFRSHPLCNISEPLAPGFPATQAAATTDGLSLFGGIDGEGTAGGNSGGYLEYVFRYAALRLFGIDLAGQPLVYREGRNPDFWETALEVRGESSI 1584
MA+V LGDLDD+I P QACINPLFT+ D A+ ++ND G A + L + D+ V V KP++IR T K+ A +SLDDCLACSGCVTSAETVLI+QQS +L DV+ +++Y VV ++SPQ+RASLA F L H +L+T R G++ ++DST DF+LLE+ EF+ R+R + + W+ P +VA+SST+ VE PI T A L P L +L S+CPGW+CYAEKT P A+P + KSPQQI G L K + R NI P++ V+HV++ C+DKKLEASRKDF ++ + +VD VL T E+++LI A D P +E L ISE DG ++ G + +SGG LE++FRYAA LF +D+ G PL Y GRNPDF E L + G+ +
Sbjct: 1 MASVFLGDLDDYIQPSQACINPLFTS--DASTASGTQNDASRPAGVAKISLEISSDDWGVQPQTV-----KPNIIRTTEKEKATISLDDCLACSGCVTSAETVLISQQSCQELLDVLSAKKYRHVVVTLSPQSRASLAAHFNLPVIAVHRKLVTMFRTLGVNMVIDSTCSGDFTLLESRAEFIHRFRNQQKTV----WTRPPSSVAVSSTKTEFVE-------PI---------------------------------TSANPLQDPLKA--LPMLASSCPGWICYAEKTQPNAIPFIDTTKSPQQIAGSLVKHMVSREQNI-----------------------------------APNE-VYHVAVMPCFDKKLEASRKDFLSEEFNV-KDVDCVLATTEIIELI---ASLNVDFMSLEPAVLSPQEIM------------LSGISE---------------DGSAVLGS-----SVNASSGGPLEHIFRYAAKELFNVDVNG-PLEYVVGRNPDFREVTLVIEGQEVL 405
BLAST of mRNA_H-elongata_contig52846.12605.1 vs. uniprot
Match: A0A5D6XLY1_9STRA (Fe_hyd_SSU domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLY1_9STRA) HSP 1 Score: 269 bits (688), Expect = 4.050e-80 Identity = 200/535 (37.38%), Postives = 264/535 (49.35%), Query Frame = 1
Query: 4 ATVMLGDLDDFIAPGQACINPLFTTADDVKAAAESENDGPGKASMQLVLE---DDEGPVDAMNVVEEEAKPDLIRATGKQTAKVSLDDCLACSGCVTSAETVLITQQSTAKLRDVIDSRRYGVVVASISPQARASLADRFGLSTTETHARLLTFLRREGIHHLVDSTLGADFSLLEAGDEFVQRYRKVPEGLYPASWSAPRPTVALSSTRRFNVEAGREEATPIGVAPSGNAGVARGQSRSAHDGNDAAPGLERTCGTEAGNLVRPRGPGELLVLTSACPGWVCYAEKTAPEALPCVSAVKSPQQIMGVLTKRVFPRAWNIPSHPAKPLGTAAARDSGRNTIGTNHDTAARSVDDRKPSQRVFHVSIAQCYDKKLEASRKDFRHDDLDGDAEV---DLVLTTVELLDLIEERAVARADANGGHPYADVSREGQEAAAGIFFRSHPLCNIS--EPLAPGFPATQAAATTDGLSLFGGIDGEGTAGGNSGGYLEYVFRYAALRLFGIDLAGQPLVYREGRNPDFWETALEVRGESSI 1584
A+V LGDLDD+I P QAC+NPLFT A AAA + N G A + L E DD G + V +P +IR + ++ A +SLDDCLACSGCVTSAETVLI+QQS +L V+ +R + +VV ++SPQ+RASLA F L H +L+T R G+H ++DST DF+LLE+ EF+ R+R + + W+ P +VA+SST+ VE ATP+ D A P +L SACPGW+CYAEKT P A+P + KSPQQI G L K + R + AA D V+HV++ C+DKKLEASRKDF LD + +V D VL T E+++LI AA I F + L +S E L G + DG ++ G +SGG LE++FRYAA LFG+D+ G PL Y GRNPDF E L V G+ +
Sbjct: 18 ASVFLGDLDDYIQPSQACVNPLFTPA----AAAATSNAPAGVAKIALETELSADDWGAPPSPAV-----RPSIIRTSTQEKATISLDDCLACSGCVTSAETVLISQQSAQELLAVLATRSHRLVVLTLSPQSRASLAAHFDLPVITVHRKLVTMFRALGVHMVIDSTASGDFALLESRAEFLHRFRNQQKTV----WARPPSSVAVSSTQTEFVEPATA-ATPL------------------QDPLQAIP-----------------------MLASACPGWICYAEKTQPNAIPFIDTTKSPQQIAGALIKHMVSREQGL-----------AATD-------------------------VYHVAVMPCFDKKLEASRKDF----LDAETQVRDVDCVLATTEIVELI-------------------------AAQSIDFAALELAQLSPQEILLSG-------VSEDGAAVLGS-----NVNASSGGQLEHIFRYAAKELFGVDVRG-PLEYVVGRNPDFREVTLVVNGQEVL 419
BLAST of mRNA_H-elongata_contig52846.12605.1 vs. uniprot
Match: A0A3R7KXU8_9STRA (Fe_hyd_SSU domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KXU8_9STRA) HSP 1 Score: 267 bits (683), Expect = 1.580e-79 Identity = 186/531 (35.03%), Postives = 259/531 (48.78%), Query Frame = 1
Query: 1 MATVMLGDLDDFIAPGQACINPLFTT---ADDVKAAAESENDGPGKASMQLVLEDDEGPVDAMNVVEEEAKPDLIRATGKQTAKVSLDDCLACSGCVTSAETVLITQQSTAKLRDVIDSRRYGVVVASISPQARASLADRFGLSTTETHARLLTFLRREGIHHLVDSTLGADFSLLEAGDEFVQRYRKVPEGLYPASWSAPRPTVALSSTRRFNVEAGREEATPIGVAPSGNAGVARGQSRSAHDGNDAAPGLERTCGTEAGNLVRPRGPGELLVLTSACPGWVCYAEKTAPEALPCVSAVKSPQQIMGVLTKRVFPRAWNIPSHPAKPLGTAAARDSGRNTIGTNHDTAARSVDDRKPSQRVFHVSIAQCYDKKLEASRKDFRHDDLDGDAEVDLVLTTVELLDLIEERAVARADANGGHPYADVSREGQEAAAGIFFRSHPLCNISEPLAPGFPATQAAATTDGLSLFGGIDGEGTAGGNSGGYLEYVFRYAALRLFGIDLAGQPLVYREGRNPDFWETALEVRGESSI 1584
MA+V LGDLDD+I P QAC+NPLFT+ + + +G K ++Q L D+ V + KP++IR T ++ A +SLDDCLACSGCVTSAETVLI+QQS ++ DV+ + +Y VV ++SPQ+RASLA F + H +L+T G+H ++DST DF+LLE+ EF+ RYR + WS P +VA+SS + +E PS T A L P + +L S+CPGW+CYAEK+ P A+P + KSPQQI G L KR + + +D V+HV++ C+DKKLEASRKDF+ + + +VD VL T E++DLIE + GI F S L N+S + + DG S+ G SGG LE++FR+AA LF +++ G PL Y GRNPDF E +L V G+ +
Sbjct: 1 MASVFLGDLDDYIQPSQACVNPLFTSDPGPSTTNGSGSQQQNGLAKITLQTELSADDF------AVPQPLKPNIIRTTTQEKATISLDDCLACSGCVTSAETVLISQQSYKEMLDVLAANKYKCVVVTLSPQSRASLAAHFEMPVIAVHRKLVTLFHNLGVHLMIDSTCSGDFALLESRAEFMHRYRNQQK----TKWSRPPSSVAVSSVKTEYLE------------PS----------------------------TAANPLQDPLRA--MPMLASSCPGWICYAEKSQPNAIPFIDTTKSPQQIAGSLIKRFV-----------------------------SGERGVTPID-------VYHVAVMPCFDKKLEASRKDFQDPEHET-KDVDCVLATTEIIDLIE-------------------------SLGIDFASLELANLSPE-----EVMLSGVSEDGSSVLGS-----NLNATSGGQLEHIFRFAAKELFNVEVNG-PLEYMAGRNPDFREVSLVVEGKEVL 406
BLAST of mRNA_H-elongata_contig52846.12605.1 vs. uniprot
Match: H3GG46_PHYRM (Fe_hyd_SSU domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3GG46_PHYRM) HSP 1 Score: 265 bits (678), Expect = 7.410e-79 Identity = 182/528 (34.47%), Postives = 267/528 (50.57%), Query Frame = 1
Query: 1 MATVMLGDLDDFIAPGQACINPLFTTADDVKAAAESENDGPGKASMQLVLEDDEGPVDAMNVVEEEAKPDLIRATGKQTAKVSLDDCLACSGCVTSAETVLITQQSTAKLRDVIDSRRYGVVVASISPQARASLADRFGLSTTETHARLLTFLRREGIHHLVDSTLGADFSLLEAGDEFVQRYRKVPEGLYPASWSAPRPTVALSSTRRFNVEAGREEATPIGVAPSGNAGVARGQSRSAHDGNDAAPGLERTCGTEAGNLVRPRGPGELLVLTSACPGWVCYAEKTAPEALPCVSAVKSPQQIMGVLTKRVFPRAWNIPSHPAKPLGTAAARDSGRNTIGTNHDTAARSVDDRKPSQRVFHVSIAQCYDKKLEASRKDFRHDDLDGDAEVDLVLTTVELLDLIEERAVARADANGGHPYADVSREGQEAAAGIFFRSHPLCNISEPLAPGFPATQAAATTDGLSLFGGIDGEGTAGGNSGGYLEYVFRYAALRLFGIDLAGQPLVYREGRNPDFWETALEVRGESSI 1584
MA+V LGDL+D+I P QAC+NPLFT+ A +++ +G K ++Q L ++ VV KP++IR + ++ A +SLDDCLACSGCVTSAETVLI+QQS ++ DV+ ++++ VV ++SPQ+RASLA F +S H +L+T R G+H ++DST DF+L+E+ EF+ RYR + + W+ P +VA+SS + +E T A L P + +L S+CPGW+CYAEK+ P A+P + KSPQQI G + KR SG + + N V+HV++ C+DKKLEASRKDF+ D D +VD VL T E+++LI+ + I F + L ++S A + + DGLS+ G + +SGG LE++FR+AA LF +++ G PL Y GRNPDF E +L V G+ +
Sbjct: 1 MASVFLGDLNDYIQPSQACVNPLFTSD---SAQPDAQPNGLAKITLQTELSAED------LVVPLPLKPNIIRTSTQEKATISLDDCLACSGCVTSAETVLISQQSYQEMMDVLAAKKHKCVVVTLSPQSRASLAAHFEMSVVVVHRKLVTLFRNLGVHLVIDSTCSGDFTLIESRAEFLHRYRNQQKTI----WARPPSSVAVSSAKTEYLEPD----------------------------------------TTANPLQDPLRA--MPMLASSCPGWICYAEKSQPNAIPFIDTTKSPQQIAGSIIKRFV---------------------SGEHGVAPNE---------------VYHVAVMPCFDKKLEASRKDFQ-DPEDATKDVDCVLATTEIIELID-------------------------SLNIDFATLELASLSSE-----EALLSGVSEDGLSVLGS-----SLSASSGGQLEHIFRFAAKELFNVEVNG-PLEYVAGRNPDFREVSLVVEGKEVL 400
BLAST of mRNA_H-elongata_contig52846.12605.1 vs. uniprot
Match: A0A2D4BNQ6_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNQ6_PYTIN) HSP 1 Score: 273 bits (698), Expect = 1.020e-77 Identity = 193/533 (36.21%), Postives = 258/533 (48.41%), Query Frame = 1
Query: 4 ATVMLGDLDDFIAPGQACINPLFTTADDVKAAAESENDGPGKASMQLVLEDDEGPVDAMNVVEEEAKPDLIRATGKQTAKVSLDDCLACSGCVTSAETVLITQQSTAKLRDVIDSRRYGVVVASISPQARASLADRFGLSTTETHARLLTFLRREGIHHLVDSTLGADFSLLEAGDEFVQRYRKVPEGLYPASWSAPRPTVALSSTRRFNVEAGREEATPIGVAPSGNAGVARGQSRSAHDGNDAAPGLERTCGTEAGNLVRPRGPGELLVLTSACPGWVCYAEKTAPEALPCVSAVKSPQQIMGVLTKRVFPRAWNIPSHPAKPLGTAAARDSGRNTIGTNHDTAARSVDDRKPSQRVFHVSIAQCYDKKLEASRKDFRHDDLDGDAEVDLVLTTVELLDLIEERAVARADANGGHPYADVSREGQEAAAGIFFRSHPLCNISEPLAPGFPATQAAATTDGLSLFGGIDGEGTA------GGNSGGYLEYVFRYAALRLFGIDLAGQPLVYREGRNPDFWETALEVRGESSI 1584
A+V LGDLDDFI PGQAC+NPLFT AD + + G ++ LE + D +EE +P++IR K+ A +SLDDCLACSGCVTSAETVLI+QQS ++ DV+ ++RY VV +ISPQ+RASLA F L + H +L+T R G+H ++DST DF+LLE+ EF+ R+R + + W+ P ++A+SST+ VE PI A D A P +L SACPGWVCYAEKT P A+P + KSPQQI G L K V R I P++ V+HV++ C+DKKLEASRKDF ++ + +VD VL T E++DL++ D N A + A T + GI +GT+ SGG LE++FRYAA LFG+ + G PL Y GRN DF E L V G+ +
Sbjct: 1 ASVFLGDLDDFIQPGQACVNPLFTGADKGTTSTPA-----GNGVAKITLETEFSAADWG--MEETVRPNIIRTDAKEKATISLDDCLACSGCVTSAETVLISQQSVQEMLDVLRAQRYKRVVVTISPQSRASLAAFFNLPVIQVHLKLVTLFRNLGVHMVIDSTASGDFALLESRAEFIHRFRNQQKTV----WARPPSSIAISSTKTEFVE-------PITAA------------NPVQDPLRAIP-----------------------MLASACPGWVCYAEKTQPNAIPFIDTTKSPQQIAGALVKHVVAREHGI-----------------------------------APNE-VYHVAVMPCFDKKLEASRKDFLDEETES-KDVDCVLATTEIIDLMQ---TLNVDLN--------------------------------------ALELAQLTADELMLSGISPDGTSVLGTSLNAGSGGQLEHIFRYAAKELFGVTVEG-PLEYVAGRNSDFREVTLVVEGQEVL 401
BLAST of mRNA_H-elongata_contig52846.12605.1 vs. uniprot
Match: A0A662WUJ6_9STRA (Fe_hyd_SSU domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUJ6_9STRA) HSP 1 Score: 261 bits (668), Expect = 4.820e-77 Identity = 192/534 (35.96%), Postives = 264/534 (49.44%), Query Frame = 1
Query: 1 MATVMLGDLDDFIAPGQACINPLFTT---ADDVKAAAESENDGPGKASMQLVLEDDEGPVDAMNVVEEEAKPDLIRATGKQTAKVSLDDCLACSGCVTSAETVLITQQSTAKLRDVIDSRRYGVVVASISPQARASLADRFGLSTTETHARLLTFLRREGIHHLVDSTLGADFSLLEAGDEFVQRYRKVPEGLYPASWSAPRPTVALSSTRRFNVEAGREEATPIGVAPSGNAGVARGQSRSAHDGNDAAPGLERTCGTEAGNLVRPRGPGELLVLTSACPGWVCYAEKTAPEALPCVSAVKSPQQIMGVLTKRVFPRAWNIPSHPAKPLGTAAARDSGRNTIGTNHDTAARSVDDRKPSQRVFHVSIAQCYDKKLEASRKDFRHDDLDGD---AEVDLVLTTVELLDLIEERAVARADANGGHPYADVSREGQEAAAGIFFRSHPLCNISEPLAPGFPATQAAATTDGLSLFGGIDGEGTAGGNSGGYLEYVFRYAALRLFGIDLAGQPLVYREGRNPDFWETALEVRGESSI 1584
MA+V LGDL+D+I P QAC+NPLFTT D + + + G K ++Q + D+ V + KP++IR + ++ A +SLDDCLACSGCVTSAETVLI+QQS ++ DV+ +++Y +VV ++SPQ+RASLA F L H +L+ RR G++ ++DST DF+LLE+ EF+ R+R + + W+ P +VA+SS + VE PI T A L P + +L S+CPGW+CYAEKT P A+P + KSPQQI G L KR H P V+HV++ C+DKKLEASRKDF LD + +VD VL T E++DLIE + A AD+S E L ISE DG S+ G + +SGG LE++FR+AA LF +D+ G PL Y GRNPDF E +L V G+ +
Sbjct: 26 MASVFLGDLNDYIQPSQACVNPLFTTDSKQSDGRDSGAQQTGGLAKITLQTEIFADD------LAVPQAVKPNIIRTSTQEKATISLDDCLACSGCVTSAETVLISQQSYKEMLDVLAAKKYQLVVVTLSPQSRASLAAHFALPVIVVHRKLVAMFRRLGVNLVIDSTCSGDFALLESRAEFLHRFRNQQKTI----WARPPSSVAVSSDQVEFVE-------PI---------------------------------TTANPLQDPLRA--MPMLASSCPGWICYAEKTQPNAIPFIDTTKSPQQIAGSLIKRFV-----CGEHGVTPSD-------------------------------VYHVAVMPCFDKKLEASRKDF----LDPEHQVKDVDCVLATTEIIDLIEALEIDFASLE----LADLSSE-----------ELMLSGISE---------------DGSSVLGS-----SLNASSGGQLEHIFRFAAKELFNVDVDG-PLEYVAGRNPDFREVSLVVEGQEVL 431
BLAST of mRNA_H-elongata_contig52846.12605.1 vs. uniprot
Match: A0A484EG90_BRELC (Fe_hyd_SSU domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EG90_BRELC) HSP 1 Score: 256 bits (653), Expect = 4.460e-75 Identity = 184/530 (34.72%), Postives = 264/530 (49.81%), Query Frame = 1
Query: 1 MATVMLGDLDDFIAPGQACINPLFTTADDVKAAAESENDGPGKASMQLVLEDDEGPVDAMNVVEEEAKPDLIRATGKQTAKVSLDDCLACSGCVTSAETVLITQQSTAKLRDVIDSRRYGVVVASISPQARASLADRFGLSTTETHARLLTFLRREGIHHLVDSTLGADFSLLEAGDEFVQRYRKVPEGLYPASWSAPRPTVALSSTRRFNVEAGREEATPIGVAPSGNAGVARGQSRSAHDGNDAAPGLERTCGTEAGNLVRPRGPGELLVLTSACPGWVCYAEKTAPEALPCVSAVKSPQQIMGVLTKRVFPRAWNIPSHPAKPLGTAAARDSGRNTIGTNHDTAARSVDDRKPSQRVFHVSIAQCYDKKLEASRKDFRHDDLDGDAEVDLVLTTVELLDLIEERAVARADANGGHPYADVSREGQEAAAGIFFRSHPLCNIS--EPLAPGFPATQAAATTDGLSLFGGIDGEGTAGGNSGGYLEYVFRYAALRLFGIDLAGQPLVYREGRNPDFWETALEVRGESSI 1584
MA+V LGDL+DFI P QACINPLFT+ + ++DG + ++ L+ + D V+ + KP++IR + ++ A +SLDDCLACSGCVTSAETVLI+QQS ++ DV+ + + + +ISPQ+RASLA F + H +L+T G++ ++DST DF+LLE+ +EF+ RYR + + W+ P +VA+SS + +E T P + VA + +L S+CPGW+CYAEK+ P A+P + KSPQQI G + KR SG + I KP+ V+HV++ C+DKKLEASRKDF+ D D +VD VL T E+++L+E A + F S L N+S E L G + DGLS+ G + +SGG LE++FRYAA +LF +++ G PL Y RN DF E L V G +
Sbjct: 10 MASVFLGDLNDFIQPSQACINPLFTSD-------KPKDDGSTIGTAKITLQTELSAADL--VLPQAVKPNIIRTSTEEKATISLDDCLACSGCVTSAETVLISQQSYKEMLDVVALQNHKFHIVTISPQSRASLAAHFSMPVITVHRKLVTMFHNLGVNLVIDSTTSGDFALLESREEFLARYRNQQKTI----WARPPSSVAISSAKTEILE------TSTAAMPLQDPLVA------------------------------------IPMLASSCPGWICYAEKSQPNAIPFIDTTKSPQQIAGSIIKRFV---------------------SGEHGI--------------KPND-VYHVAVMPCFDKKLEASRKDFQ-DPEDATKDVDCVLATTEIIELLE-------------------------AVNVDFASLELANLSPEEVLLSGI-------SEDGLSVLGS-----SLKASSGGQLEHIFRYAAKQLFNVEIKG-PLEYVTARNSDFQEVKLVVGGNEVL 409 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52846.12605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig52846.12605.1 >prot_H-elongata_contig52846.12605.1 ID=prot_H-elongata_contig52846.12605.1|Name=mRNA_H-elongata_contig52846.12605.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=528bp MATVMLGDLDDFIAPGQACINPLFTTADDVKAAAESENDGPGKASMQLVLback to top mRNA from alignment at H-elongata_contig52846:649..3208- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig52846.12605.1 ID=mRNA_H-elongata_contig52846.12605.1|Name=mRNA_H-elongata_contig52846.12605.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2560bp|location=Sequence derived from alignment at H-elongata_contig52846:649..3208- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig52846:649..3208- >mRNA_H-elongata_contig52846.12605.1 ID=mRNA_H-elongata_contig52846.12605.1|Name=mRNA_H-elongata_contig52846.12605.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3168bp|location=Sequence derived from alignment at H-elongata_contig52846:649..3208- (Himanthalia elongata Himel1 dioecious)back to top |