mRNA_H-elongata_contig5273.12587.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5273.12587.1 vs. uniprot
Match: D8LLI3_ECTSI (Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI3_ECTSI) HSP 1 Score: 758 bits (1958), Expect = 3.130e-246 Identity = 530/1047 (50.62%), Postives = 616/1047 (58.83%), Query Frame = 1
Query: 817 PTRPSLVPSALWERLSREFNRSQLRAVWAATASARERCEEQLRERARMVEGSGQTGTDATDRSAVAA-----------------FSVGRERAEGGVVLLQGPPGTGKTRTVLGVVSAILARRKENATGSGGGSGREFGAAMVIPGENGGDRGSGTALAVGGRQKRPGVTGRWAAAKTHQRLLVCAPSNGAVDELAQRLALEGGGVWDHRGEMFAPRVVRVGTPSEGAADRVKAVSLECMVEERIKAHPKSVEARDADSKVQKAYQRMEEAEKNMRSVAIGGGDERGGGGVSTGIGSAGNRRGRRYHFAAEIRRLRREILVAKQRRRDSMRALEVERGRIRHSLINNAQVVCTTLSGCGSVHLVEAVSSCGKGFDTVVVDEACQATELSTLIPLSLGCKRLILVGDPRQLPATVISPRAARLKLETSLFERLESAGHPVHMLTIQYRMHPEIRAFPSERFYGGRLVDAPCVRCAPANYRSRPPPPKSPAPLPLGPCFPPFLVLDVSSGREQKVRSSYENAQEATLVVALLSRLVAFGLRPPRGSNLRCLEADGSGSSGRGGSVPGGKIRVGVIAPYRGQVRRIRQELGDRR------RLKGDPEDGCVDVEISTVDGFQGKEVDVVLFSCVRAPSAASGGGYGGHGGGIGFLADQRRMNVAITRARRSLVVLGNASRLSRDATWKSLVDHASAHGRLVRDSIQPRRAMLEKGGEGA---SAEAFCNRLEAKLPGVPGG-----PQQESGLPRRRKSGVQEEDDADISAAVRDQYSTVSGGKRSRSMGMKSGHQEKLPDKLLRAPKPKRPRTDTSTATDSRGSSSGRAHVVVAARAAAAT------------------------TASMSSERTPKAR--DVERRPKRLDSAL---PPVPAR------AAGGSDSVAGTVRQTRSADAAN-PRK----------------DSGSSFLGNLLGSMQSNAARIASGEAHEAREGLKGGEHDERKRAAAGPRLDGARVTELGRPRAPKSAQAGKFPLPSRQPQSSRVTDVGSRDSLTVGVRKG 3708
P RPSLVP+ALW+RLS+EFN SQLRA+WAA ASARE +E L AR +G AT +AV A LLQGPPGTGKTRTVLGVVSAILARR+E GS G RG GT LA G RQKRPGV GRW AAKTHQR+LVCAPSNGAVDELAQRLALE GGVWD RG APRVVR+G PSE AADRVKAVSLE MVEER+K H KS EAR A++K+++ + R++EA + +RS +G E GG GIGSA NRR + IRRLR E+LVAKQRRRD++R+LEVERG+IR SL VVC TLSGCGS +VEAVS GKGFDTV+VDEACQATE STLIPLSLGCKRLILVGDPRQLPATVIS RAARL LE SLFERLE AG+PVHMLT+QYRMHPEIRAFPS RFY GRL DAPCVR A ++ P ++ A PLGPCFPPFL++DVSSG E++ SSY+N +EA+ V A L+RLVA GLR RG G +RVGVI PYRGQV I+QEL RLKG EDG VD E+STVDGFQGKEVDVVLFSCVRAPS+ IGFLADQRRMNVA+TRARRSLVVLGN RLS D TWK+LVDH+ + RL ++++ R + GG EA C RLE G GG +Q +G R + G E DDA S V+GG + + P+RP + T RG SG +V AAA + R P +R D R L+ ++ PPV R A G + G+ + AAN P+K D G FLG LL S+ SNA IASG+ H+ R+GL+GGE +ER+R AA PRL GARVTEL RP PK A + + + R T V S D G +G
Sbjct: 71 PKRPSLVPAALWDRLSQEFNVSQLRAIWAAAASARE-AQEDLAAAARDNDGR------ATPEAAVLAERRAPVNHAXXXXXXXXXXXXXXXXXXXXXLLQGPPGTGKTRTVLGVVSAILARREEKDCGS------------XXXXXXXGARGMGTTLAPGARQKRPGVAGRWVAAKTHQRILVCAPSNGAVDELAQRLALESGGVWDQRGNAVAPRVVRLGKPSEDAADRVKAVSLEFMVEERVKLHAKSAEARTAETKIRETHARIDEAGRAVRSGGVG---EVGG---VAGIGSAENRR---HQLNTHIRRLRGELLVAKQRRRDALRSLEVERGKIRRSL-----VVCATLSGCGSGPMVEAVSLSGKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGYPVHMLTVQYRMHPEIRAFPSARFYNGRLTDAPCVRDQ-AAIPAQSPSSETTALPPLGPCFPPFLLVDVSSGSERRAGSSYQNPREASFVSAFLARLVASGLRSGRGVKAGGXXXXXXXXXXGQDREKSGVVRVGVITPYRGQVHCIQQELSGXXXXXXXXRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSSGXXXXXX-----IGFLADQRRMNVALTRARRSLVVLGNVGRLSSDGTWKALVDHSKSRDRLEPEAVKARTS----GGXXXXXXDGEALCARLEETAAGKKGGRDRSGDRQSTGRNRAGRGGRGEADDAVGSG--------VAGGSDKKEIQA-----------------PRRP-AGSRTGGHGRGDGSGGINVPDDRAAAAVVVPPAVADIGEHCADRRANPRHEPESVGSGQRRKPSSRGGDGVRPSAGLEGSVRDRPPVDKRQQRHEEAGGAKPTPRGSACRRPDGGAANRPQKRARADGQGAAKRVSTPDGG--FLGGLLSSLSSNAGGIASGKEHDFRQGLRGGEDEERRRVAAAPRLGGARVTELSRPVEPKQAPPARHSSRAAAAATGRQTPVESDDRGGRGSHRG 1046
BLAST of mRNA_H-elongata_contig5273.12587.1 vs. uniprot
Match: A0A6H5J6B2_9PHAE (AAA_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6B2_9PHAE) HSP 1 Score: 337 bits (865), Expect = 7.340e-98 Identity = 280/614 (45.60%), Postives = 334/614 (54.40%), Query Frame = 1
Query: 100 QATSEPRLEPVPQQL-RPPLPPTAAEPNPNNPWSA-LRPLYPVDETSFVDACKRLSSVE-SALTVEVDRGSLGPVNSNHPLAGAGTAVQALTGVLEQVLGCLSSFRVTSNLLTSRGRDAGRRAKRLSKSHGLSLGVRAAAARLLRGWRGVVDAEKKAETLGTSGEKKGLPEKQVQGGEATKEAK---GGEVKRSLLGVASVM--TVPTRSGKKSLLSNNTNIS---------EEKSHMSSTSVV----RSSRVSPTPSGPPT-----------RPSLVPSALWERLSREFNRSQLRAVWAATASARERCEEQLRERARMVEGSG--QTGTDATDRSAV----------AAFSVGRERAEGGVVLLQGPPGTGKTRTVLGVVSAILARRKENATGSGGGSGREFGAAMVIPGENGGDRGSGTALAVGGRQKRPGVTGRWAAAKTHQRLLVCAPSNGAVDELAQRLALEGGGVWDHRGEMFAPRVVRVGTPSEGAADRVKAVSLECMVEERIKAHPKSVEARDADSKVQKAYQRMEEAEKNMRSVAIGGGDERGGGGVSTGIGSAGNRRGRRYHFAAEIRRLRREILVAKQRRRDSMRALEVERGRIRHSLINNAQ 1809
QATSEP L+P+P+ R P T + NN W+ L P Y VDE SF DACKRLSSVE SAL + G P + AG + L + LGCL+SFRV LLTS GR +R KRLSKS VR AAARLLR WRGVVD A + K+ E++ G GG ++ +G ++ P S K L+ H S + SS SP + PP RPSLVP+ALW+RLS+EFN SQLRA+WAA ASARE E L AR +G +T A R+ V LLQGPPGTGKTRTVLGVVSAILARR+E SGGG GA+ RG GT LA RQKRPGV GRW AAKTHQR+LVCAPSNGAVDELAQRLALE GGVWD RG APRVVR+G PSE AADRVKAVSLE MVEER+K H KS EAR+A++K+++ + R++EA + +RS +G E GG GIGSA NR D++R+L+VERG+IR SL++NAQ
Sbjct: 4 QATSEPSLQPLPETAQRAPGNSTTS----NNLWATKLAPPYLVDEASFTDACKRLSSVEDSALLGKSGAGGGSPATA----AGLAADIAGPEESLMRSLGCLASFRVAPELLTSHGRGTAKRLKRLSKSEVWGPDVRNAAARLLRAWRGVVDVGGGATAYSKAATKRSQDEERGGAGSGXXXXXXXXGGA--KAKVGAEQIVDRVRPAASTKPRLVGEKEQXXXXXXXXXGISSSGHKSPAPMPDAGSSSSDFSPKVTCPPEKQQKEQQQTPKRPSLVPAALWDRLSQEFNVSQLRAIWAAAASARE-AHEDLAAAARGNDGPATPETAVLAERRAPVNHAAXXXXXXXXXXXXXXXXXXXXXLLQGPPGTGKTRTVLGVVSAILARREEKDCASGGG---RSGASA---------RGMGTTLAPEARQKRPGVAGRWVAAKTHQRVLVCAPSNGAVDELAQRLALESGGVWDQRGNATAPRVVRLGKPSEDAADRVKAVSLEFMVEERVKLHAKSAEARNAETKIRETHARIDEAGRAVRSGDVG---EVGG---MAGIGSAENR--------------------------DALRSLDVERGKIRRSLVSNAQ 562
BLAST of mRNA_H-elongata_contig5273.12587.1 vs. uniprot
Match: W7TPV4_9STRA (Helicase sen1 n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPV4_9STRA) HSP 1 Score: 322 bits (826), Expect = 2.950e-85 Identity = 257/695 (36.98%), Postives = 352/695 (50.65%), Query Frame = 1
Query: 826 PSLVPSALWERLSREFNRSQLRAVWAATASARERCEEQLRERARMVEGSGQTGTDATDRSAVAAFSVGRERAEGGVVLLQGPPGTGKTRTVLGVVSAILARRKENATGSGGGSGREFGAAMVIPGENGGDRGSGTALAVGGRQKRPGVTGRWAAAKTHQRLLVCAPSNGAVDELAQRLALEGGGVWDHRGEMFAPRVVRVGTPSEGAADRVKAVSLECMVEERIKAHPKSVEARDADSKVQKAYQRMEEAEKNMRSVAIGGGDERGGGGVSTGIGSAGNRRGR----RYHFAAEIRRL--RREILVAKQRRRDSMRALEVERGRIRHSLINNAQVVCTTLSGCGSVHLVEAVSSCGKGFDTVVVDEACQATELSTLIPLSLGCKRLILVGDPRQLPATVISPRAARLKLETSLFERLESAGHPVHMLTIQYRMHPEIRAFPSERFYGGRLVDAPCVRCAPANYRSRPPPPKSPAPLPLGPCFPPFLVLDVSSGREQKVRSSYENAQEATLVVALLSRL-VAFGLRPPRGSNLRCLEADGSGSSGRGGSVPGGKIRVGVIAPYRGQVRRIRQELGDRRRLKGDPEDGCVDVEISTVDGFQGKEVDVVLFSCVRAPSAASGGGYGGHGGGIGFLADQRRMNVAITRARRSLVVLGNASRLSRDATWKSLVDHASAHGRLV----RDSIQPRRAMLEK 2877
PS VP LW+ L ++FN QL+A+ A+ + A G E V LLQGPPGTGKTR ++G++SAI+ R + A V P AL VG R + R+LVCAPSNGA+DE+ RL G + + G++F P +VR+G A + VK VSLE +E + + + E AD++V R++ E++ R +A+ D R G G G + AE R+ R E+ AK+RR + ++ALE E+ RIR++LI +A+++ +TLS S L EAV+S +GF TVV+DEA QA E STLIPL GC+ LILVGDPRQLPATV+SP + K + SLFERLE GHPVH+L +QYRM P I FPS+ FY +L +AP + A + P F + V +VSS RE K ++ N +EA V L++RL V F +L + + VI PYR QVR + + L R R E+G E+ST+DGFQG+E +V++FSCVRA GG IGFLAD+RRMNV +TRARRSL VL + + L D +W++ ++ A LV RD Q ML++
Sbjct: 1933 PSHVPLKLWKSLQQQFNAPQLKAISASCFINAQ------------------------------AVHQGCE-----VTLLQGPPGTGKTRCIMGLLSAIMHSRPTSTYYP------SHSATNVRP-----------ALRVGYRHHQ-----------REARILVCAPSNGAIDEITMRLQRTG--LLNAEGQVFKPTLVRLGVVDPDAEEEVKTVSLESQLERALLTNFQKKEYDKADAEVL----RLQRDERDAREIAL---DARK---CRLDHGLHGRNEGEVEESEWLRKAEQRQRISRSELYRAKRRRWECLKALEAEKSRIRNNLIRDAKIILSTLSTAASSQLAEAVTSTSRGFGTVVIDEAGQAVEPSTLIPLRYGCRNLILVGDPRQLPATVMSPVLQKYKYDRSLFERLEKGGHPVHLLRVQYRMRPPICRFPSQAFYHNKLSNAPALEAAEEDADG------DLKRYDRVPYFGAYRVFNVSSAREIKRGNAISNIEEAIFAVQLIARLRVEF-------PDLVAFK------------------HMAVITPYRAQVRLVEEHL--RVRFG---EEGSSLAEVSTIDGFQGREKEVIIFSCVRANP---------QGGTIGFLADERRMNVGLTRARRSLFVLCHRASLWTDRSWRAFIEDAEERQSLVDTGGRDFDQLALMMLQR 2507
BLAST of mRNA_H-elongata_contig5273.12587.1 vs. uniprot
Match: A0A2G5BIP1_COERN (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BIP1_COERN) HSP 1 Score: 272 bits (696), Expect = 4.290e-76 Identity = 214/617 (34.68%), Postives = 294/617 (47.65%), Query Frame = 1
Query: 1042 EGGVVLLQGPPGTGKTRTVLGVVSAILARRKENATGSGGGSGREFGAAMVIPGENGGDRGSGTALAVGGRQKRPGVTGRWAAAKTHQRLLVCAPSNGAVDELAQRLALEGGGVWDHRGEMFAPRVVRVGTPSEGAADRVKAVSLECMVEERIKAHPKSVEARDADSKVQKAYQRMEEAEKNMRSVAIGGGDERGGGGVSTGIGSAGNRRGRRYHFAAEIRRLRREILVAKQRRRDSMRALEVERGRIRHS--------------LINNAQVVCTTLSGCGSVHLVEAVSSCGKGFDTVVVDEACQATELSTLIPLSLGCKRLILVGDPRQLPATVISPRAARLKLETSLFERLE-SAGHPVHMLTIQYRMHPEIRAFPSERFYGGRLVDAP---CVRCAPANYRSRPPPPKSPAPLPLGPCFPPFLVLDVSSGREQK-VRSSYENAQEATLVVALLSRLVAFGLRPPRGSNLRCLEADGSGSSGRGGSVPGGKIRVGVIAPYRGQVRRIRQELGDRRRLKGDPEDGCVDVEISTVDGFQGKEVDVVLFSCVRAPSAASGGGYGGHGGGIGFLADQRRMNVAITRARRSLVVLGNASRLSRDATWKSLVDHASAHGRL 2835
E G L+QGPPGTGKT+T+LG+ A+L++ K+ AA + +LL+CAPSN AVDE+ +RL G+ D RG F PRVVRVG S+ + V+ +L+ ++E+ + A+ K QR A+ + +V I + S R A +R +R + KQR++ + LE ER R R + ++ + ++C TLSG G + ++S FDTV++DEA Q+ ELS LIPL C R +LVGDP QLP TV S A + SLF R++ +A V +L+IQYRMHPEI A PS FY RL D P +CAP + R +PPF+ L++ SGREQK S N QE V L+ FGL C + K R+GVI PY+ Q+R++ + R+ D +E +TVDGFQG+E D+++FSCVRA A G+GFLAD+RRMNV +TRAR+SL VLGNA L WKSL+D A+ G L
Sbjct: 4 EHGFTLIQGPPGTGKTKTILGLTGALLSQDKD------------------------------------------------AARTANNKLLICAPSNAAVDEIVKRLK---SGIRDSRGVTFKPRVVRVGQ-SDHISSTVRDTTLDFLMEQALNANTTQALGAKETRKSALGQQRTLRAQLDEINVEI------------RELDSQMQRTD--PSSTAALREMREKFHSVKQRKQRVCQQLEQERARAREASKAXXXXXXXXRMQILQSTDILCCTLSGSGH----DMLTSLKCAFDTVIIDEAAQSIELSCLIPLKYECNRCVLVGDPLQLPPTVFSQSATKHGYNKSLFVRVQQNAPESVSLLSIQYRMHPEISALPSRLFYNSRLKDGPEMAAKQCAPWHRNER---------------YPPFVFLNIQSGREQKGALHSVFNMQEVEAAVQLV-----FGL---------CQDYP----------KLSWKQRIGVITPYKQQLRKLVEAF--RKHFGPSATDA---IECNTVDGFQGQEKDIIIFSCVRAGEA-----------GVGFLADRRRMNVGLTRARKSLFVLGNAKMLGGSPLWKSLIDDANTRGLL 495
BLAST of mRNA_H-elongata_contig5273.12587.1 vs. uniprot
Match: A0A6H5J8A4_9PHAE (AAA_12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8A4_9PHAE) HSP 1 Score: 269 bits (687), Expect = 1.640e-72 Identity = 288/811 (35.51%), Postives = 369/811 (45.50%), Query Frame = 1
Query: 2116 IRAFPSERFYGGRLVDAPCVRCAPANYRSRPPPPKSPAPL---PLGPCFPPFLVLDVSSGREQKVRSSYENAQEATLVVALLSRLVAFGLRPPRGSNLRCLEADGSGSSGRGGSVP------GGKIRVGVIAPYRGQVRRIRQEL---GDRRRLKGDPEDGCVDVEISTVDGFQGKEVDVVLFSCVRAPSAASGGGYGGHGGGIGFLADQRRMNVAITRARRSLVVLGNASRLSRDATWKSLVDHASAHGRLVRDSIQPRRAMLEKGGEGA---SAEAFCNRLEAKLPGVPGGPQQESGLPRRRKSGVQEEDDADISAAVRDQYSTVSGGKRSRSMGMKSGHQEKLPDKLLRAPKPKRPRTDTSTATDSRGSSSGRAHVVVAARAAAATTASMSS-----------------------ERTPKAR--DVERRPKRLDSAL---PPVPAR------AAGGSDSVAGTVRQTRSADAAN-PRK----------------DSGSSFLGNLLGSMQSNAARIASGEAHEAREGLKGGEHDERKRAAAGPRLDGARVTELGRPRAPKSAQAGKFPLPSRQPQSSRVTDVGSRDSLTVGVRKGDHCKDKGGRSAFDGGSGAGGTRGGTRYGDGVRSTTGGHPAW-SGARENVSTSDNRSASRYSKKPITGETSGWGPSRSTGGGGIVSGGNSMGKDSRTTPRHQGQTINR-------PTDGKNIREFTQPGRGPVAEASGGISGSSDGRARFDSSSKSAPKGALASRRYPRPPETRARGSGASEAGVARRSGDVGGMGVLDILQGIGSTWGESKNKK 4326
+ A S RFY GRL DAPCVR A + P ++ PL PLGPCFPPFL++DVSSG E++ SSY+N +EA+ V A L+RLVA GLR RG ++A G G +RVG+I PYRGQV I+QEL G RRLKG EDG VD E+STVDGFQGKEVDVVLFSCVRAPS SG IGFLADQRRMNVA+TRAR SL++LGN RLS DATW +LVDH+ + RL + ++ R + GG EA C RLE G GG R +SG D R+Q G+ ++G + + K ++AP R + T RG SG +V AAAA +++ R P R D R RL+ ++ PPV A G + G+ + AAN P+K DSG FLG LL S+ SNA IASG+ H+ R+GL+GGE A PRL GARVTEL RP + A + + SSR V + D+GGR + G V ST P+ + AR SAS + + T+ R S +D R G+ N+ P++ + +P AE+ G S + G+ + +S + GA SR + + GS AS G GG VLDILQGI TWG+S KK
Sbjct: 9 VPAGSSARFYNGRLTDAPCVRDQ-AAIPAPSPSSEATGPLALPPLGPCFPPFLLVDVSSGSERRAGSSYQNPREASFVSAFLARLVASGLRSGRG-----VKAGGXXXXXXXXXXXXRDREKSGVVRVGIITPYRGQVHCIQQELSGGGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPS--SGXXXXXXXXXIGFLADQRRMNVALTRARCSLIILGNVGRLSSDATWNALVDHSKSRERLEPEVVKARTS----GGXXXXXXDGEALCARLEKAAAGKKGG---------RDRSG-------DRQGTGRNQAGRGGRGEADDAVGSRVA--DGSDGKEIQAP---RRAAGSRTGGHVRGDGSGGINVPDDRAAAAAVPPAVTDIEEHCADKRANPQHKPESGGSGQRRKPSWRGGDEVRPSARLEESMRDRPPVEKHQQRHEEAGGAKPTPRGSACKRPDGGAANRPQKRARVYGQEAAKRVSTPDSG--FLGGLLSSLSSNAGGIASGKEHDFRQGLRGGEDXXXXXXXAAPRLGGARVTELSRPVEREQAPSARH--------SSRAAAAADATGRQTPVER----DDRGGRGSHRG----------------VDSTEVVPPSTRTDARNGGRVVGTSSASTVDARRVAPSTA----RRDA----------SSARDYRVGRNQFGRGANQHLQPPPQPSEQRKRARRVEPAAATGAESGGASSRAGVGK-QLPASRR---PGASGSRSGGKSVGAKKTGSEASRGG--------GGTSVLDILQGISDTWGDSSKKK 730
BLAST of mRNA_H-elongata_contig5273.12587.1 vs. uniprot
Match: A0A4S2MSS5_9PEZI (CCHC-type domain-containing protein n=1 Tax=Ascodesmis nigricans TaxID=341454 RepID=A0A4S2MSS5_9PEZI) HSP 1 Score: 280 bits (715), Expect = 3.290e-72 Identity = 223/647 (34.47%), Postives = 322/647 (49.77%), Query Frame = 1
Query: 1000 RSAVAAFSVGRERAEGGVVLLQGPPGTGKTRTVLGVVSAILARRKENATGSGGGSGREFGAAMVIPGENGGDRGSGTALAVGGRQKRPGVTGRWAAAKTHQRLLVCAPSNGAVDELAQRLALEGGGVWDHRGEMFAPRVVRVGTPSEGAADRVKAVSLECMVEERIKAHPKSVEARDADSKVQKAYQRMEEAEKNMRSVAIGGGDERGGGGVSTGIGSAGNRRGRRYHFAAEIRRLRREILVAKQRRRDSMRALEVERGRIRHSLINNAQVVCTTLSGCGSVHLVEAVSSCGKGFDTVVVDEACQATELSTLIPLSLGCKRLILVGDPRQLPATVISPRAARLKLETSLFERL-ESAGHPVHMLTIQYRMHPEIRAFPSERFYGGRLVDAPCVRCAPANYRSRPPPPKSPAPLPLGPCFPPFLVLDVSSGREQKVRSSYENAQEATLVVALLSRLVAFGLRPPRGSNLRCLEADGSGSSGRGGSVPGGKIRVGVIAPYRGQVRRIRQELGDR--RRLKGDPEDGCVDVEISTVDGFQGKEVDVVLFSCVRAPSAASGGGYGGHGGGIGFLADQRRMNVAITRARRSLVVLGNASRLSRDATWKSLVDHASAHGRLVRDS--IQPRRAMLEKGGEGASAEAFCNRLEA 2925
R+ +AA S G G L+QGPPGTGKT+TV+G+V A+L G A+ +PG QK+ AA ++LLVCAPSN AVDEL R GV +GE PR+VR+G S+ VK V+LE +++ R+ + ++ D +K + MEE + + + D+ GNR +A IR LRRE+ + +++ R LE++R +I+ ++N A ++C TLSG G E + + F+TV++DEA Q+ ELS LIPL GC + ILVGDP+QLP TV+S AA+ E SLF R+ E+ VH+L+IQYRMHP I +FPS FY L+D + A+ R+ P F P+ DV+ G+E + +S N +E + L RL S+ ++ G RVG++ PYR Q+ ++++ R R + DVE +TVD FQG+E D++LFSCVRA GG+GFL+D RRMNV +TRA+ SL VLGN+ L R+ W LV+ A A D+ I R + L++ A A N+++A
Sbjct: 1234 RAIIAATSAGS-----GFSLIQGPPGTGKTKTVIGIVGAMLT---------------VHGQAIQVPGTT---------------QKK--------AAPVTRKLLVCAPSNAAVDELVIRFKK---GVRTTKGETVIPRIVRIGR-SDVINAEVKDVTLEDLIDARMGPALEKGNNQNMDELREKHTKLMEERDVLQKEL-----DD-----CRANKQDPGNRLQNIDALSATIRTLRRELDSTRNTNKENSRNLEIKRRQIQQEIMNEAHIICATLSGSGH----EMLRNVNVDFETVIIDEAAQSVELSALIPLKFGCDKCILVGDPQQLPPTVLSREAAKFSYEKSLFVRIQENNSKNVHLLSIQYRMHPMISSFPSAEFYNSNLMDGEGM----ADLRT--------TPWHKSTVFGPYRFFDVA-GKESRGGTSLINREEVQTAIQLFQRLT---------SDFPEVKFQG---------------RVGIVTPYRQQLFELKKQFEGRFGRSI-------LTDVEFNTVDAFQGRERDIILFSCVRAADE----------GGVGFLSDIRRMNVGLTRAKSSLFVLGNSQFLMRNRMWGRLVEDAKARDVFTTDTRKILSRSSRLDRN----QAPAAPNQVDA 1761
BLAST of mRNA_H-elongata_contig5273.12587.1 vs. uniprot
Match: A0A1B2JCE6_PICPA (BA75_02572T0 n=2 Tax=Komagataella TaxID=460517 RepID=A0A1B2JCE6_PICPA) HSP 1 Score: 277 bits (708), Expect = 2.580e-71 Identity = 244/718 (33.98%), Postives = 366/718 (50.97%), Query Frame = 1
Query: 988 DATDRSAVAAFSVGRERAEG--------GVVLLQGPPGTGKTRTVLGVVSAILARRKENATGSGGGSGREFGAAMVIPGENGGDRGSGTALAVGGRQKRPGVTGRWAAAKTHQRLLVCAPSNGAVDELAQRLALEGGGVWDHRGEMFAPRVVRVGTPSEGAADRVKAVSLECMVEERIKAHPKSVEARDADSKVQKAYQRMEEAEKNMRSVAIGGGDERGGGGVSTGIGSAGNRRGRRYHFAAEIRRLRREILVAKQRRRD----SMRALEVERGRIRHSLINNAQVVCTTLSGCGSVHLVEAVSSCGKGFDTVVVDEACQATELSTLIPLSLGCKRLILVGDPRQLPATVISPRAARLKLETSLFERLESAGHP--VHMLTIQYRMHPEIRAFPSERFYGGRLVDAPCVRCAPANYRSRPPPPKSPAPLPLGPCFPPFLVLDVSSGREQKVRS--SYENAQEATLVVALLSRLVAFGLRPPRGSNLRCLEADGSGSSGRGGSVPGGKIRVGVIAPYRGQVRRIRQELGDRRRLKGDPEDGCVDVEISTVDGFQGKEVDVVLFSCVRAPSAASGGGYGGHGGGIGFLADQRRMNVAITRARRSLVVLGNASRLSRDATWKSLVDHASAHGRLVRDSIQPRRAMLEKGGEGASAEAFCNRLEAKLPGVPGGPQQESGLPRRRKSGVQEEDDADISAAVRDQYSTVSGGKRSRSMGMKSG 3093
DAT + + F V + +A+ G L+QGPPGTGKT+T+LG+V +L R + + IPG A A G R+ V +++LVCAPSN AVDEL RL GV G+MF PRVVR+G S+ VK ++LE +V+ + ++ A AD +++ + ++ AE+N A+ E VS +RY +EI + + E+ +R+ S R E++R ++ +++ AQ++C+TLSG S H + +++ FDTVV+DEACQ ELS +IPL GCKR I+VGDP QLP TV+S AA K E SLF R+ + HP V++L +QYRMHP+I FPS+ FY G+L+D N RS PP+ +DV+ G+E S S N EA VV+LL +L+ L+ D + +S ++GVI+PY+ QV +R + R+ + + ++++TVDGFQG+E DV+LFSCVRA G+GFLAD RR+NVA+TRA+ +L+++GNAS LS + W+ LV + R+ +R++L+ GG+ N LP PG + E LP ++ A+++A +DQ ++ G+RS+ G K+G
Sbjct: 1264 DATLQDTMTKFRVNKSQAQAIAGASTSSGFSLIQGPPGTGKTKTILGIVGKVLTTRNNLHS-----------TPISIPG----------ATAPGPRKSETEV----------RKVLVCAPSNAAVDELVIRLRE---GVPGISGQMFKPRVVRLGR-SDAINSAVKDLTLEELVDAELN---ETTRAPKADQSIRERHNKVL-AERNSIREAL---KE-----VSNLKPEEVKDLQKRY---SEITKTKNELGKKLDEQREEVSVSYRNREIQRRAVQFRILSQAQIICSTLSG--SAH--DFLATMDTSFDTVVIDEACQCIELSAIIPLRYGCKRCIMVGDPNQLPPTVLSQAAAEYKYEQSLFVRMMNV-HPKSVYLLNVQYRMHPQISVFPSKEFYNGKLIDGEGTETK--NTRS------------WHKQIPPYCFVDVT-GKESTNTSNKSLFNRAEAQAVVSLLEKLLG-------------LDRDFNFAS-----------KIGVISPYKQQVVLLRDMI--LRKFGRN-----IGIDVNTVDGFQGQEKDVILFSCVRADETK----------GVGFLADVRRLNVALTRAKSTLLIVGNASNLSGHSLWRHLVQDSRD-----RNVFFTQRSLLD-GGK-------ANVTVGMLPSGPGKRKIEGVLPPEKRKNTT----ANLNAGSKDQ---INNGQRSKLKGQKNG 1850
BLAST of mRNA_H-elongata_contig5273.12587.1 vs. uniprot
Match: A0A1Y2GGK7_9FUNG (AAA domain-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GGK7_9FUNG) HSP 1 Score: 263 bits (672), Expect = 2.970e-70 Identity = 216/605 (35.70%), Postives = 302/605 (49.92%), Query Frame = 1
Query: 1048 GVVLLQGPPGTGKTRTVLGVVSAILARRKENATGSGGGSGREFGAAMVIPGENGGDRGSGTALAVGGRQKRPGVTGRWAAAKTHQRLLVCAPSNGAVDELAQRLALEGGGVWDHRGEMFAPRVVRVGTPSEGAADRVKAVSLECMVEERIKAHPKSVE-----ARDADSKVQKAYQRMEEAEK-NMRSVAIGGGDERGGGGVSTGIGSAGNRRGRRYHFAAEIRRLRREILVAKQRRRDSMRALEVERGRIRHSLINNAQVVCTTLSGCGSVHLVEAVSSCGKGFDTVVVDEACQATELSTLIPLSLGCKRLILVGDPRQLPATVISPRAARLKLETSLFERLES-AGHPVHMLTIQYRMHPEIRAFPSERFYGGRLVDAPCVRCAPANYRSRPPPPKSPAPLPLGPCFPPFLVLDVSSGREQ-KVRSSYENAQEATLVVALLSRLVAFGLRPPRGSNLRCLEADGSGSSGRGGSVPGGKIRVGVIAPYRGQVRRIR---QELGDRRRLKGDPEDGCVDVEISTVDGFQGKEVDVVLFSCVRAPSAASGGGYGGHGGGIGFLADQRRMNVAITRARRSLVVLGNASRLSRDATWKSLVDHASAHG 2829
G L+QGPPGTGKT+T+LG+V A+L G R +V P R S +L G T ++LVCAPSN A+DE+ +RL GG+ + G F P+VVRVGT E VK V+L+ ++ + ++A +S E A+ + +K Q +E EK + V D+ I A N + + +L +++ A+ ++ D+ + + R R+ ++ A V+C+TLS G E ++S F+TV++DEA Q+ E+S+LIPL GCKR ILVGDP QLP TVIS A + SLF R++S A VH+L+IQYRMHP+I AFPS FY L D P + K+ A P PP+ DV G+EQ + S N EA ALL L P + R RVGVI+PY+ QVR ++ Q D++ L+ V+ +TVDGFQG+E D+++FSCVRA + G +GFLAD RRMNVA+TRAR+SL +LG+A L R+ W LV A G
Sbjct: 251 GFTLIQGPPGTGKTKTILGLVGALLV-----------GGSRSRATPVVHP-----SRSSERSLQTG----------------TVNKILVCAPSNAAIDEIVKRLM---GGIRNTVGGTFVPKVVRVGT-LETINMEVKDVALDTLIAKELEASSESKEEFQSAAQSMTAMREKMRQLQDELEKARLELVQAKDADDN--------IAIA-NAQSKIKSVNKSKWQLGQDLDNARSKQADATQKKDQARKNARNKILGEADVICSTLSASGH----ELLTSSTFTFETVIIDEAAQSVEISSLIPLKYGCKRCILVGDPNQLPPTVISQLATKYAYNQSLFVRIQSLAPSSVHLLSIQYRMHPDISAFPSREFYKALLKDGPGMA------------EKTRAEWHRNPLTPPYRFFDVYQGQEQIGLSHSQHNPIEAEAAAALLEGLCNSN---PTLNFFR---------------------RVGVISPYKQQVRMLKDCFQRTFDKQILEA--------VDFNTVDGFQGQEKDIIIFSCVRASTR----------GTVGFLADIRRMNVALTRARQSLFILGHAETLRRENIWGDLVKDAEERG 752
BLAST of mRNA_H-elongata_contig5273.12587.1 vs. uniprot
Match: A0A1Y1Z4H4_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z4H4_9FUNG) HSP 1 Score: 264 bits (675), Expect = 4.890e-70 Identity = 207/598 (34.62%), Postives = 299/598 (50.00%), Query Frame = 1
Query: 1036 RAEGGVVLLQGPPGTGKTRTVLGVVSAILARRKENATGSGGGSGREFGAAMVIPGENGGDRGSGTALAVGGRQKRPGVTGRWAAAKTHQRLLVCAPSNGAVDELAQRLALEGGGVWDHRGEMFAPRVVRVGTPSEGAADRVKAVSLECMVEERIKAHPKSVEARDADSKVQKAYQRMEEAEKNMRSVAIGGGDERGGGGVSTGIGSAGNRRGRRYHFAAEIRRLRREILVAKQRRRDSMRALEVERGRIRHSLINNAQVVCTTLSGCGSVHLVEAVSSCGKGFDTVVVDEACQATELSTLIPLSLGCKRLILVGDPRQLPATVISPRAARLKLETSLFERLES-AGHPVHMLTIQYRMHPEIRAFPSERFYGGRLVDAPCVRCAPAN--YRSRPPPPKSPAPLPLGPCFPPFLVLDVSSGREQKVRS-SYENAQEATLVVALLSRLVAFGLRPPRGSNLRCLEADGSGSSGRGGSVPGGKIRVGVIAPYRGQVRRIRQELGDRRRLKGDPEDGCVDVEISTVDGFQGKEVDVVLFSCVRAPSAASGGGYGGHGGGIGFLADQRRMNVAITRARRSLVVLGNASRLSRDATWKSLVDHA 2817
R E G L+QGPPGTGKT+T+LG++ A+L+ R + + R + +++LVCAPSN AVDEL +RL G+ D G F P+VVR+G E K +SLE +VE+ + + P S E + + A E ++ MR++ + + ST + + + ++ L +++ R+ S RAL++ + +IR ++ A +VC+TLSG G E ++S F+TV++DEA Q+ ELS+LIPL GC+R +LVGDP QLP TV+S AA E SLF R+++ VH+L+IQYRMHPEI AFPS+ FYG +L D P + + +R F P+ L+V SGRE+ R S N +EA + VAL+ L C S R +G+I PY+ Q+R +R RR + ++ +TVDGFQG+E D+++FSCVRA G HG IGFLAD RRMNV +TRAR SL +LGN+ L + W+ LV+ A
Sbjct: 331 RREQGFSLIQGPPGTGKTKTILGLIGAVLSSRNPDK-----------------------------------------IETRTEETSSSKKVLVCAPSNAAVDELVKRLK---DGIRDSNGAAFKPKVVRIGI-FESINSSAKEMSLEHLVEKEMNS-PDS-EYSKSKKNLNNASSLASELKEKMRAIVKERDELKDMMSRSTDAFAIADMEAKVKQLNSKRWNLAKQLDGENDRKSTSYRALDIAKRKIRTKILTEADIVCSTLSGSGH----EQLTSLAVDFETVIIDEAAQSIELSSLIPLKYGCRRCVLVGDPNQLPPTVLSQVAASYSYEQSLFVRIQNHCPDAVHLLSIQYRMHPEISAFPSKLFYGSKLRDGPNLAQIKTQKWHENRK--------------FAPYNFLNVHSGREEIGRGKSLYNTKEAEIAVALVHHL--------------CKAFPTINFSNR----------IGIITPYKQQLRELR-----RRFESAFGQTITQVIDFNTVDGFQGQEKDIIIFSCVRA------GNRKWHG--IGFLADIRRMNVGLTRARYSLFILGNSKSLLENKYWRPLVEDA 826
BLAST of mRNA_H-elongata_contig5273.12587.1 vs. uniprot
Match: A0A8H3A0W7_9AGAM (Hypothetical protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3A0W7_9AGAM) HSP 1 Score: 271 bits (694), Expect = 1.050e-69 Identity = 213/628 (33.92%), Postives = 306/628 (48.73%), Query Frame = 1
Query: 1048 GVVLLQGPPGTGKTRTVLGVVSAILARRKENATGSGGGSGREFGAAMVIPGENGGDRGSGTALAVGGRQKRPGVTGRWAAAKTHQRLLVCAPSNGAVDELAQRLALEGGGVWDHRGEMFAPRVVRVGTPSEGAADRVKAVSLECMVEERIKAHPKSVEARDAD-----SKVQKAYQRMEEAEKNMRSVAIGGGDERGGGGVSTGIGSAGNRRGRRYHFAAEIRRLRREILV-------AKQRRRDSMRALEVERGRIRHSLINNAQVVCTTLSGCGSVHLVEAVSSCGKGFDTVVVDEACQATELSTLIPLSLGCKRLILVGDPRQLPATVISPRAARLKLETSLFERLESAG-HPVHMLTIQYRMHPEIRAFPSERFYGGRLVDAPCV--RCAPANYRSRPPPPKSPAPLPLGPCFPPFLVLDVSSGREQ-KVRSSYENAQEATLVVALLSRLVAFGLRPPRGSNLRCLEADGSGSSGRGGSVPGGKIRVGVIAPYRGQVRRIRQELGDRRRLKGDPEDGCV-DVEISTVDGFQGKEVDVVLFSCVRAPSAASGGGYGGHGGGIGFLADQRRMNVAITRARRSLVVLGNASRLSR-DATWKSLVDHASAHGRLVRDSIQPRRAMLEK 2877
G L+QGPPGTGKT T+ G+ + ++ + ALA G ++ K +RLL+CAPSN A+DE+ +RLA GV D+ G+ +VVRVGT + V A SL+ +V+E++ A PKS D ++ Q+++ + + G RR E R L+ + A+ ++R++ R L+ R + RH ++N A V+C+TLSG G ++E F+TVV+DEA QA E++TLIPL GCK ILVGDP+QLP TVIS A+ L SLF RL+ VH+L+IQYRMHP I A PS FY GRL+D P + R + S F P+ DV+ GRE+ ++ S N EA VAL RL R R +N + R+G+++ YRGQV I+ R G + V+ +TVDGFQG+E D+++ SCVRA + +GFLAD+RRMNVA+TR+R SL +LG+A+ L R +ATWK++V+ A G L++ S + ++K
Sbjct: 1312 GFSLIQGPPGTGKTSTICGLAGSFVSAAR-------------------------------AALAASGEKE-----------KDKRRLLICAPSNAAIDEVTKRLA---DGVRDNNGQPLTLKVVRVGTEASMNVS-VTANSLDSLVDEKMAAMPKSANTNATDIPALRQELGHIKQKIDAKRNELDNTPPG---------------------QRRIALENEFRALKTQRTTITSKLDSARDQQRNASRVLDAARRKFRHEVLNEADVICSTLSGAGH-EVLEPFE-----FETVVIDEAAQAIEIATLIPLRYGCKTCILVGDPQQLPPTVISQLASGLDYNQSLFVRLQKQNPESVHLLSIQYRMHPTISAVPSRLFYNGRLLDGPDMDQRTKQIWHTSS--------------LFGPYRFFDVAQGREEAQLNHSQINRGEADAAVALYGRLT----REFRATNF--------------------EYRIGIVSMYRGQVAHIKS------RFSAAYGPGILKSVDFNTVDGFQGQEKDIIILSCVRAGTNVQS---------VGFLADERRMNVALTRSRSSLFILGHAATLERCNATWKTIVEDARTRGHLLKYSPDMQSVSVQK 1813 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5273.12587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5273.12587.1 >prot_H-elongata_contig5273.12587.1 ID=prot_H-elongata_contig5273.12587.1|Name=mRNA_H-elongata_contig5273.12587.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1216bp MTVPTRSGKKSLLSNNTNISEEKSHMSSTSVVRSSRVSPTPSGPPTRPSLback to top mRNA from alignment at H-elongata_contig5273:123..11393- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5273.12587.1 ID=mRNA_H-elongata_contig5273.12587.1|Name=mRNA_H-elongata_contig5273.12587.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=11271bp|location=Sequence derived from alignment at H-elongata_contig5273:123..11393- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5273:123..11393- >mRNA_H-elongata_contig5273.12587.1 ID=mRNA_H-elongata_contig5273.12587.1|Name=mRNA_H-elongata_contig5273.12587.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=7296bp|location=Sequence derived from alignment at H-elongata_contig5273:123..11393- (Himanthalia elongata Himel1 dioecious)back to top |