mRNA_H-elongata_contig52713.12586.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig52713.12586.1
Unique NamemRNA_H-elongata_contig52713.12586.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: D7FS04_ECTSI (Triose phosphate/phosphate translocator, non-green plastid, chloroplast, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS04_ECTSI)

HSP 1 Score: 372 bits (955), Expect = 3.260e-122
Identity = 218/440 (49.55%), Postives = 280/440 (63.64%), Query Frame = 2
Query:  152 IPTPRTGRRPPAQVCSLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQ-IRFSWLALLWALSSNLSNALRNVLVVKNIG--AAAAGKV------------SDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAAR-----------SRAGS------------EAGNRVAMDTS--GIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTRC 1351
            +P PR  + PP+Q+C LF LSY  S+ FN+NNKRA +L PLPWT+A+LNL IGS +AL +WS K APWPRI  QD+ VLV +G LH VSHL VVLGLGAG +SF+QT+KA+EACFTALLS++ LGQ        + LP YLTL+PVV GV +T C Q +RFSW+ LL AL S+L NA+ NVL+VKNIG  AAAAG+             S  A  +R    ++++  S       RS    +           R R+ GL  L+ GDTYRL TVV A ++ P +  +E  SW  LW+ A DA ++++  T +A            S AGS             A    A++ +  G W  A R AV++G+ FNLFYD++FRLLGQLHP+THAVGNT+KRIVVI+AGA AFGGD GG RG +GS LAV+GVL +S++K RC
Sbjct:    5 LPNPRAPQPPPSQICGLFGLSYLCSMLFNINNKRALMLVPLPWTFAALNLSIGSVIALLSWSIKVAPWPRITRQDLAVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQ-------TMPLPVYLTLLPVVAGVALTCCGQGLRFSWVGLLSALVSHLPNAMGNVLIVKNIGPAAAAAGRRRSSLKTEASPPRSSSASFLRPTAANTAADPSFLSNPVARSASALANTRAGGEATTRRRRESGLASLARGDTYRLLTVVGAALIIPAAAYMERDSWPRLWRAAMDATAALVGRTTSADGSPPLLGEALLSAAGSGGDSXXXXXXRVSAVAEAAVEAAARGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGARGVLGSALAVIGVLGYSLSKARC 437          
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: A0A6H5KHZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHZ8_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 8.120e-102
Identity = 197/413 (47.70%), Postives = 257/413 (62.23%), Query Frame = 2
Query:  176 RPPAQVCSLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQ-IRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAAR-----------SRAGS-----EAGNRVAMDTS----GIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTRC 1351
            R   ++C LF LSY  S+ FN+NNKRA +L PLPWT+A+LNL IGS +AL +WS K APWPRI  QD+ VLV +G LH VSHL VVLGLGAG +SF+QT+KA+EACFTALLS++ LGQ        + LP YLTL+PVV GV +T C Q +RFS    + +  S+ S+ LR         A  AG  S  +  V     +S+ +++R+ G++                   R R+ GL  L+ GDTYRL TVV A ++ P +  +E  SW  LW+ A DA ++++    +A            S  GS      AG RV+        G W  A R AV++G+ FNLFYD++FRLLGQLHP+THAVGNT+KRIVVI+AGA AFGGD GG RG MGS LAV+GVL ++++K RC
Sbjct:  118 RRSLRICGLFGLSYLCSMLFNINNKRALMLVPLPWTFAALNLSIGSVVALLSWSIKIAPWPRITRQDLAVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQ-------TMPLPVYLTLLPVVAGVALTCCGQGLRFSLETEVSSPRSSGSSFLRPTA------ANTAGDPSFLSNPV--ARSASALANTRAGGEA----------------TTQRSRESGLASLARGDTYRLLTVVGAALIIPAAAYMERDSWPRLWRAAMDATAALVGRRTSADGLPPLPGEALLSAVGSVEDSSAAGGRVSAVAEAAVRGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGARGVMGSALAVIGVLGYNLSKARC 499          
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: A0A7S0L8Y2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L8Y2_9EUKA)

HSP 1 Score: 157 bits (397), Expect = 3.820e-40
Identity = 115/399 (28.82%), Postives = 194/399 (48.62%), Query Frame = 2
Query:  155 PTPRTGRRPPAQVCSLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSG-IWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTR 1348
            P  + G        S FAL Y F++G+N+ NK+A    P+P+T A+L LL+G       W+      P++   +I  L+ + L H  +H+  V+ LGAG +SF   +KASE   +A LS ++LG   + P+       YLTL+P+V GV + S  ++ F+WL  + A+ SNLS+ALR +L  K +G    G V +                                                   ++  + Y + T++A + + P+++ LE  +          A+S+ +    A+ +             TSG +W+ +L    ++G  + L+ +V+F  LG+++P+THAVGNT+KR+V+I A   AF        G +GS++A+VG L +S+AK++
Sbjct:   67 PAEKDGLMETLTTGSFFALWYLFNIGYNIYNKKALNALPIPYTMATLQLLVGIPYCFFLWTTGIRKAPKLNAGNIKTLIPVSLGHLGTHIGAVVSLGAGAVSFTHIVKASEPVVSAALSAMLLGAF-YSPIT------YLTLLPIVGGVALASLKELSFTWLGFIAAMGSNLSSALRGILAKKTMG----GGVGEN--------------------------------------------------MNEANLYGVLTILAFLFMLPITLALEPPA----------AISAAVNAALASGA-------------TSGYLWKQSL----MAGAFYYLYNEVAFLALGRVNPVTHAVGNTIKRVVIIIASVIAFKTPISS-LGIIGSSIAIVGTLLYSLAKSK 376          
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: A0A7S4E311_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E311_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.580e-37
Identity = 116/386 (30.05%), Postives = 179/386 (46.37%), Query Frame = 2
Query:  197 SLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDT--YRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSGIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTR 1348
            S FAL Y F++G+N+ NK+A  + P+PWT A+L L  G    L  WS  A   P++   ++  L  +   H  +H+  V+ LGAG +SF   +KASE   +A LS V+LG   + P+       YLTL+P+V GV + S  ++ F+WL    A+ SN+S+ALR +L  K +G                                                        G +G +  +T  Y + T++A  +L PVS+ +E                             G+     VA  TS    A L  + +SG  + L+ +V+F  LG+++P+THAVGNT+KR+V+I A   AF        G +GS++A+ G L +S+AK +
Sbjct:  136 SFFALWYLFNIGYNIYNKKALNVLPMPWTLATLQLFAGIPYVLLLWSTGARKTPKLTQDNLKTLFPVACGHLGTHIGAVISLGAGAVSFTHIVKASEPVVSAALSAVMLGAF-YSPIT------YLTLLPIVGGVALASLKELSFTWLGFGAAMLSNVSSALRGILAKKTMG--------------------------------------------------------GGVGENMNETNLYAVMTIMAFAVLLPVSLLVETPK------------------------AVGAAINTAVAAGTSKKDLAIL--SALSGAYYYLYNEVAFLALGRVNPVTHAVGNTIKRVVIIIASVIAFNTPIS-RLGVIGSSIAITGTLLYSLAKNK 431          
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: A0A4D9DFS8_9STRA (TPT domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFS8_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.270e-36
Identity = 111/410 (27.07%), Postives = 179/410 (43.66%), Query Frame = 2
Query:  131 LQNRRRGIPTPRTGR----RPPAQVCSLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSGIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTR 1348
            L +RR G     TG     +   +V S F L Y F++G+N+ NK+A  + PLPW    + L +G       W F     P++ LQ++  ++ +  +H ++H+  V+ LGAG +SF   IKA+E  FT+L S + L Q    P+       Y +L+PV+ GV I S  + +FSWLA   A+ +N ++A R +                                                A +T     G+        + P + Y + T++A +++ PV+  +E       W+ A    S                                + + V SG+ F L+ +V+F  L  +HP+THAVGNT+KR+V+I A    F       +G +GS +A+ GVL +S+A  R
Sbjct:   81 LVSRRGGAVATATGSDAGVKQTLKVGSFFFLWYLFNIGYNIYNKKALNVLPLPWMVGLVQLSLGLLYVFPLWLFGIRKAPKLSLQNVKNILPVAAMHAMAHITAVISLGAGAVSFTHIIKAAEPAFTSLFSALFLKQYFS-PV------VYASLIPVMGGVAIASLTERKFSWLAFNSAMLANTASAGRGI-----------------------------------------------FAKKTMKEPQGQN-------MDPANLYAVLTILATLIMAPVAFLVEGSKLKPAWEAALAVTSQ----------------------------RQLINYIVSSGLYFYLYNEVAFLALDSVHPVTHAVGNTIKRVVIIGASILVFKNPIT-LQGYIGSAVAIAGVLLYSLAVER 400          
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: A0A6U3YGD8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YGD8_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.470e-34
Identity = 120/402 (29.85%), Postives = 182/402 (45.27%), Query Frame = 2
Query:  149 GIPTPRTGRR--PPAQVCSLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSGIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTR 1348
            G  TP  G+      +V   FAL Y  ++G+N+ NK+A  +  LPWT A+L L  G       W+      P +  +++  L    + H  +H+  VL LGAG +SF   +KASE   +ALLS V L        E L +P YL+L+PV+ GVG+ S  ++ FSWLA   A+ SN+++A R +L                                       ++V +G          MG         L+  + Y + T++A +ML P+S+C+E            DA  S            G+  G           E A+  A+ SG+ + L+ +V+F  L  + P+THAVGNT+KR+V+I A    F        GA GS +A+ G L +S+AK +
Sbjct:   75 GGSTPDEGKSMAETLKVGGYFALWYILNIGYNIYNKKALNIVNLPWTIATLQLFAGIPYVFFLWTTGLRKKPILTTENVQNLAPSAICHLGTHVGAVLSLGAGAVSFTHIVKASEPVVSALLSAVFLK-------EFLPIPVYLSLLPVIGGVGLASLKELSFSWLAFSTAMLSNVASASRAIL--------------------------------------SKTVLSGK--------PMGEN-------LTAQNLYAVLTILAFVMLLPMSLCVETPMKIK---AVVDAAIS-----------GGTPMG-----------ELAMVSAL-SGVFYYLYNEVAFLALNAVAPVTHAVGNTIKRVVIILASVIVFRNPMTN-LGAAGSAIAIFGTLLYSLAKNK 389          
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: F0YEM8_AURAN (TPT domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEM8_AURAN)

HSP 1 Score: 137 bits (344), Expect = 5.420e-33
Identity = 111/386 (28.76%), Postives = 177/386 (45.85%), Query Frame = 2
Query:  197 SLFALSYAFSVGF--NVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDT--YRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSGIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAK 1342
            S FAL Y F++G      +++A    PLPWT A++ L  G       W+      P++   ++  L  + + H  +H+  V+ LGAG +SF   IKASE   +A LS V+L +  + P+       YLTL+P+V GVG+ S  ++ F+WL    A+ SN+S+ALR +L  K +G                                                        G +G +  +T  Y + T++A  +L PVS+C+E  +          AV S +    AA              D + +       + +SG  + L+ +V+F  LG+++P+THAVGNT+KR+V+I A   AF        G +GS++A+ G L +S+AK
Sbjct:   38 SFFALWYLFNIGRARGAFSRKALNAMPLPWTLATVQLFAGIPYVALLWATGLRKAPKLSTDNVKTLFPVAMGHLGTHIGAVISLGAGAVSFTHIIKASEPVVSAALSAVML-KAYYSPIT------YLTLLPIVGGVGLASLKELSFTWLGFAAAMLSNVSSALRGILAKKTMG--------------------------------------------------------GGVGENMNETNLYAVLTIIAFAVLLPVSLCVETPA----------AVGSAIDAAVAA---------GHTKKDLAVL-------SALSGAYYYLYNEVAFLALGRVNPVTHAVGNTIKRVVIIIASVIAFNTPIS-TLGVVGSSIAITGTLLYSLAK 333          
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: R1CRL8_EMIHU (TPT domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CRL8_EMIHU)

HSP 1 Score: 131 bits (330), Expect = 2.980e-31
Identity = 105/393 (26.72%), Postives = 174/393 (44.27%), Query Frame = 2
Query:  188 QVCSLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSGIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRI--------VVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAK 1342
            +V   FAL +  SVG+++ NKR +   P PW+ A+  +++GS      W       PR+       L+ IG  H + H+A  +G  AG++SF Q +KA+   +  +LS             A++L  +L+L P++ GVG+ +  ++ F+W ALL A++S+L+ ALRNVL  +++GA                        S SDG                              L+P D + L T ++A +  P ++ +E R+   LW  A                 AG  AG+   +  +G           +G+ F  + +V+ + L  +HP+THA+GNT++R+        V++     AF      P GA GS LA+ G   ++  K
Sbjct:    4 KVGGYFALWFLLSVGYSITNKRVTNALPCPWSVATATVVVGSLFVNLLWLTGLRRRPRLSAATYRALIPIGTFHAIGHIAGTVGTAAGSVSFAQVVKAAGPVYACVLSA-----------AAVSLRVWLSLAPIIAGVGLATLKELSFAWAALLGAVASDLALALRNVLSKQSMGAL-----------------------STSDGDK----------------------------LAPADMFGLLTCISAAVSVPAALLVEGRALPALWASAA----------------AGYPAGS---LGLAG-------QVAATGLYFYGYSEVAMKALNNVHPVTHAIGNTMRRVLPAREARVVIMLVCMVAFRTPMT-PLGACGSALAIGGSYLYATVK 307          
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: A0A2A9MAF1_9APIC (Apicoplast triosephosphate translocator APT1 n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9MAF1_9APIC)

HSP 1 Score: 129 bits (323), Expect = 7.120e-30
Identity = 111/403 (27.54%), Postives = 173/403 (42.93%), Query Frame = 2
Query:  158 TPRTGRRPPAQVCSLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGV--LVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIG--LSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSGIWEAA--LRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTR 1348
            +P+   R   Q+  L  L YA +V +N++NK A ++ PLPW  ++  L  G      AW+    P PR     +    +   G+ H   H+  V+ +G G +SF   +KASE   TALLS V L QV        +   YL+LVP+V GV + S  ++ F+W+AL  AL S L ++ R V                                                    A  AM   +   L+G  LS  + Y L T+VA+++  P+++  E    A++W  AT+                             G W     L     SG  + ++ +V++  L +++ +THAV NT+KR+V+I A    F      P GA GS +A+ G L +S++KT+
Sbjct:   37 SPQEQTRFYVQLGGLLFLWYALNVMYNLDNKLALIMLPLPWMVSTFQLFFGWIFFCFAWATGLRPVPRFHSPGLFFTRIAPQGVCHFFVHIGAVISMGCGAVSFTHIVKASEPVLTALLSGVFLHQV-------FSWQTYLSLVPIVAGVVMASVTELSFTWMALGCALVSALGSSSRAVF---------------------------------------------------AKRAMANRK---LVGENLSSANMYALLTIVASLVSLPLALIAEGSQVASVWAAATN---------------------------PDGPWTRTQILTKMCFSGFWYYMYNEVAYLCLEKVNQVTHAVANTLKRVVIIVASVIFFQTPVT-PLGAAGSVVAIAGTLLYSLSKTK 350          
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: A0A7S4JYS4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JYS4_9STRA)

HSP 1 Score: 129 bits (325), Expect = 7.300e-30
Identity = 103/409 (25.18%), Postives = 183/409 (44.74%), Query Frame = 2
Query:  125 FSLQNRRRGIPTPRTGRRPPAQVCSLFALSYAFSVGFNVNNKRASLLAP-LPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSGIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTR 1348
            F + NR +       G++  A+V   FAL Y  S+G+N+ +K+A  LAP L WT A   + +G+      W       P +   ++  L+ + +LH + H+  V+ +GAG +SF   +KASE   +A LS   L     +PL     P YLTL+PV+ GV ++S +++ FSW +  +A+ SN+++A R                                               G +  +T    +G+        ++  +TY + T++++ ML PV++ LE     N +                              +  +G +   +   +++ + +  + + +F  L  + P++HA+GNT+KR+ +I A    FG      +G +GS +AV GVL +S+AKT+
Sbjct:   69 FEVSNREKA---GFLGQQKRAKVGITFALWYILSIGYNICSKKALNLAPNLAWTAAFFQMSLGTLYVGPLWLSGLRARPNLTFDEVARLLPVAMLHCLVHVGGVISMGAGAVSFTYIVKASEPAVSAALSA--LATKTFLPL-----PVYLTLIPVMGGVALSSVSELTFSWKSFNYAMMSNVASASR-----------------------------------------------GLVGKQTLNKKLGKN-------MNAMNTYAILTLLSSAMLLPVALFLEGPQILNAFGD----------------------------LQRAGKFSEYIAQTLMAALFYFTYNECAFVCLDNVSPVSHALGNTLKRVFIIVASIIVFGNKMT-TQGIVGSVMAVAGVLLYSLAKTK 384          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS04_ECTSI3.260e-12249.55Triose phosphate/phosphate translocator, non-green... [more]
A0A6H5KHZ8_9PHAE8.120e-10247.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0L8Y2_9EUKA3.820e-4028.82Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S4E311_9STRA1.580e-3730.05Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A4D9DFS8_9STRA1.270e-3627.07TPT domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A6U3YGD8_9STRA2.470e-3429.85Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0YEM8_AURAN5.420e-3328.76TPT domain-containing protein (Fragment) n=1 Tax=A... [more]
R1CRL8_EMIHU2.980e-3126.72TPT domain-containing protein (Fragment) n=1 Tax=E... [more]
A0A2A9MAF1_9APIC7.120e-3027.54Apicoplast triosephosphate translocator APT1 n=1 T... [more]
A0A7S4JYS4_9STRA7.300e-3025.18Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52713contigH-elongata_contig52713:473..3326 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score302.8
Seed ortholog evalue2.1e-79
Seed eggNOG ortholog2880.D7FS04
Preferred nameSLC35E3
KEGG koko:K06643,ko:K15283,ko:K15285
KEGG TC2.A.7.9
KEGG Pathwayko01522,ko01524,ko04068,ko04110,ko04115,ko04120,ko04144,ko04151,ko04218,ko04919,ko05165,ko05169,ko05200,ko05202,ko05203,ko05205,ko05206,ko05214,ko05215,ko05218,ko05219,ko05220,map01522,map01524,map04068,map04110,map04115,map04120,map04144,map04151,map04218,map04919,map05165,map05169,map05200,map05202,map05203,map05205,map05206,map05214,map05215,map05218,map05219,map05220
EggNOG free text desc.carbohydrate transport
EggNOG OGsKOG1441@1,KOG1441@2759
EC2.3.2.27
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko04121,ko04131
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionEamA domain
Ec32 orthologEc-12_006980.1
Exons4
Model size1354
Cds size1038
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52713.12586.1prot_H-elongata_contig52713.12586.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig52713 473..3010 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930860.9919336-CDS-H-elongata_contig52713:472..11931622930860.9919336-CDS-H-elongata_contig52713:472..1193Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52713 473..1193 -
1691679601.6183085-CDS-H-elongata_contig52713:472..11931691679601.6183085-CDS-H-elongata_contig52713:472..1193Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52713 473..1193 -
1622930861.0163727-CDS-H-elongata_contig52713:1634..17171622930861.0163727-CDS-H-elongata_contig52713:1634..1717Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52713 1635..1717 -
1691679601.6284618-CDS-H-elongata_contig52713:1634..17171691679601.6284618-CDS-H-elongata_contig52713:1634..1717Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52713 1635..1717 -
1622930861.033901-CDS-H-elongata_contig52713:2393..25701622930861.033901-CDS-H-elongata_contig52713:2393..2570Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52713 2394..2570 -
1691679601.6363873-CDS-H-elongata_contig52713:2393..25701691679601.6363873-CDS-H-elongata_contig52713:2393..2570Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52713 2394..2570 -
1622930861.0536516-CDS-H-elongata_contig52713:2953..30101622930861.0536516-CDS-H-elongata_contig52713:2953..3010Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52713 2954..3010 -
1691679601.6443639-CDS-H-elongata_contig52713:2953..30101691679601.6443639-CDS-H-elongata_contig52713:2953..3010Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52713 2954..3010 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930861.0740356-UTR-H-elongata_contig52713:3010..33261622930861.0740356-UTR-H-elongata_contig52713:3010..3326Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52713 3011..3326 -
1691679601.6530554-UTR-H-elongata_contig52713:3010..33261691679601.6530554-UTR-H-elongata_contig52713:3010..3326Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52713 3011..3326 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig52713.12586.1

>prot_H-elongata_contig52713.12586.1 ID=prot_H-elongata_contig52713.12586.1|Name=mRNA_H-elongata_contig52713.12586.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=346bp
MALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFV
QTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSC
NQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCY
GSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDTYR
LTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSE
AGNRVAMDTSGIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGN
TVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTRC*
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mRNA from alignment at H-elongata_contig52713:473..3326-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig52713.12586.1 ID=mRNA_H-elongata_contig52713.12586.1|Name=mRNA_H-elongata_contig52713.12586.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2854bp|location=Sequence derived from alignment at H-elongata_contig52713:473..3326- (Himanthalia elongata Himel1 dioecious)
CGGTCCTATTTGGCGATCCAGCCGACAAGCAGGCAATCTGCGTTCCGAAT GGGGTTTCGACTGTCGTCTCGACGAGAGGTGTGGGACGTCTCTGGCTAAG GCCGCGGCCGTATTTTTCGTCTAATTCTCCCTCCAAAACAGGAGACGCGG AATCCCAACCCCTCGCACTGGCCGTCGACCGCCTGCACAGGTCTGCTCGC TATTCGCTCTGTCGTACGCGTTTTCGGTGGGCTTCAACGTCAACAACAAG CGGGCTTCGCTCTTGGCGCCGCTGCCATGGACTTACGCGTCCCTGAACCT CTTGATCGGCTCCGCGATGGCCCTTGCAGCGTGGTCCTTCAAGGCCGCTC CCTGGCCTAGAATAAGGCTACAGGTAGGGGAAGCAAACCAACCCTGGCGT GCGCGGTGGCCCGTGTCTTTCGACGGCGAACAAGCGATGTCATCGGAGGA AAATAGGCCTCTTGGTGGAGGGTTTCAAGAGGCGTGCGTTGCTGTAGAGC TCATATGTAATATTTGCCTTGGAGGGTGGCTGGGGTTAACGCGCGGCGTC CCCTTCCGTTTTATTCCGACAGGAAGTAGGCGTTGGGGTCGCTACTGCTC GTCCGCGGATTCAACGGTTTTCCACCCGTACCCATCAAACACTCCGCGTC AATCTCTCTTAAACGGTGCCGTACATCCCACAGTAACGAGGATGACTCGG TCTAACCCCCTCACTTCGCGAACCAACCATTTATCCTTGGCTCCGTGGTT GCGAAGGACATTGGAGTTCTTGTTTCTATCGGGCTGCTCCACACGGTTTC CCACCTGGCCGTGGTGCTCGGTCTCGGTGCGGGGACGATTTCCTTCGTAC AAACTATCAAGGCTTCGGAGGCGTGCTTCACGGCCCTGTTGTCCTTCGTG ATCCTGGGTCAGGTGAGGCACGTCCCTCTTGAGGTAGGGGCCGACGCGGC GCGGATGCCTGGCGGGTGTCTTCGTAACAATAAGAGAGAGGGATAGATAC AAACAGTGCGCGGGAGAAAGAATCAACTGCAGCCCTACCGCGATGGCCTT GCGGGAAAGGTGTTGCGTAAGAACTCTAGGCTGTTTGGTGTCATGCATTT TCCCAGTGTCGCTGATTGTATACTTAAATCAACGCCCTCTTCTTGGGCAA GAAACGTTTATGACGGATGCCCGCAGCCGTTTGATGCTGGGGTATTCTCC TTGCGAGGCTTTCCCTCTGAAAACACACCACTTCACTAATGCACTTACCG CGAAATAGTTGCCAGGATAACAGGAAGGTGGTGATCGAGCGTAAGATCCC TGCGGAGAGATTTATTCTGCCAGTCCCAACTGTTGTGCCGCATCTGCATG TCCGGAGAGTACCTAGTCTCTTATCTGAATGACTGAGCGTTAATAATTGC AGCAAAATGTGCACGCTACGACGCCACGCGTCGTGAACTGCGCTCCTCGT ACAGCTCTCCCAAAGCTATCGTCGGCTTGCGGCCCCGCCTGGGTCCTTTT CGTGGCTTCTTTTTGAACACGCCATCCTTCGTAGACCTTGACATGAAACA CGCGGTACAGATATCACGCTGTCGCTTCCCGCGTCGTCCCAACTTTCGTT CCACGAGAGGCGCTTACGCTGCCCGCGTACCTAACGCTTGTTCCGGTGGT GGTCGGTGTGGGAATCACGAGCTGCAATCAAATTCGATTTAGGTGGGTCC ATGAGCGGACTCGTGCAGATTTTGTCGCGTTGGTTTGATATTGGCGACAT TGGCGGCGACAAAACAAGGCATTGCGTCGGTTGCGTCGACAAGCTTTTTG CCCTCGCTGAAGCGGGGACTTGCTAGTAATCGCCCGCGCCAGACTCTTCA AATCTTGATCTTCGTGTTGAAAACGGTGTTATCATCTTGTTCTCCTGAAA CGGCATAACATTATAACGTATTTTGGCTGCCGGCGAGCCTTCGCCCTCGT CGGTGTTCTATTGTAATCTGTTTTACTGAAGGACGGCAAGGATTGCGTGG TCATGCCTCCGCGGTACCCCGCCAATGGAGGCTAATGTCCCCCCGGCCCC CCTTGTCCCCCCCCCAAAAAAAACAACACGAACTTGACACCTTTCGCTCG CCAAACTCATTCTCCCTCGCCATGGGATCGCAGCTGGCTGGCCCTCCTCT GGGCACTCTCATCCAACCTTAGCAACGCCCTGCGTAACGTGCTCGTCGTG AAGAACATCGGCGCGGCCGCCGCTGGTAAGGTGTCCGATAAAGCCGGAGT TGTACGAGGGTGCTACGGTAGCAGCAGTAGCAGTGATAGCAGGAGTGATG GCAAGTCTCCAAGATCCGTAAAAACTGGGAGCATCGCATCCCGGACGGCC ACGCCCGCCATGGGGCGGGAACGAAAGGGGGGACTGATCGGTCTGTCCCC TGGAGACACTTACCGCCTAACCACAGTGGTCGCGGCGATTATGTTGTTTC CCGTTTCCGTGTGCTTGGAGCACCGCTCCTGGGCGAATCTCTGGCAAGGG GCAACAGACGCCGTCTCATCAGTGTTGACATTCACGCGCGCAGCACGCTC TCGAGCGGGATCGGAAGCAGGGAACAGAGTGGCGATGGATACATCGGGGA TTTGGGAGGCGGCGCTCAGACACGCGGTGGTGTCGGGCATTTGTTTCAAC CTCTTCTACGACGTGTCGTTCAGGCTCTTGGGGCAGCTGCACCCCTTGAC GCACGCGGTGGGCAACACTGTGAAGCGCATCGTCGTCATCAGCGCTGGCG CAGCGGCGTTCGGGGGAGACTTTGGGGGACCAAGGGGGGCCATGGGGTCG ACGCTGGCGGTGGTCGGGGTGCTCGCCTTCTCCGTGGCAAAGACGAGGTG CTAA
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Coding sequence (CDS) from alignment at H-elongata_contig52713:473..3326-

>mRNA_H-elongata_contig52713.12586.1 ID=mRNA_H-elongata_contig52713.12586.1|Name=mRNA_H-elongata_contig52713.12586.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2076bp|location=Sequence derived from alignment at H-elongata_contig52713:473..3326- (Himanthalia elongata Himel1 dioecious)
ATGGCCCTTGCAGCGTGGTCCTTCAAGGCCGCTCCCTGGCCTAGAATAAG
GCTACAGATGGCCCTTGCAGCGTGGTCCTTCAAGGCCGCTCCCTGGCCTA
GAATAAGGCTACAGGACATTGGAGTTCTTGTTTCTATCGGGCTGCTCCAC
ACGGTTTCCCACCTGGCCGTGGTGCTCGGTCTCGGTGCGGGGACGATTTC
CTTCGTACAAACTATCAAGGCTTCGGAGGCGTGCTTCACGGCCCTGTTGT
CCTTCGTGATCCTGGGTCAGGTGAGGCACGTCCCTCTTGAGGACATTGGA
GTTCTTGTTTCTATCGGGCTGCTCCACACGGTTTCCCACCTGGCCGTGGT
GCTCGGTCTCGGTGCGGGGACGATTTCCTTCGTACAAACTATCAAGGCTT
CGGAGGCGTGCTTCACGGCCCTGTTGTCCTTCGTGATCCTGGGTCAGGTG
AGGCACGTCCCTCTTGAGGCGCTTACGCTGCCCGCGTACCTAACGCTTGT
TCCGGTGGTGGTCGGTGTGGGAATCACGAGCTGCAATCAAATTCGATTTA
GGCGCTTACGCTGCCCGCGTACCTAACGCTTGTTCCGGTGGTGGTCGGTG
TGGGAATCACGAGCTGCAATCAAATTCGATTTAGCTGGCTGGCCCTCCTC
TGGGCACTCTCATCCAACCTTAGCAACGCCCTGCGTAACGTGCTCGTCGT
GAAGAACATCGGCGCGGCCGCCGCTGGTAAGGTGTCCGATAAAGCCGGAG
TTGTACGAGGGTGCTACGGTAGCAGCAGTAGCAGTGATAGCAGGAGTGAT
GGCAAGTCTCCAAGATCCGTAAAAACTGGGAGCATCGCATCCCGGACGGC
CACGCCCGCCATGGGGCGGGAACGAAAGGGGGGACTGATCGGTCTGTCCC
CTGGAGACACTTACCGCCTAACCACAGTGGTCGCGGCGATTATGTTGTTT
CCCGTTTCCGTGTGCTTGGAGCACCGCTCCTGGGCGAATCTCTGGCAAGG
GGCAACAGACGCCGTCTCATCAGTGTTGACATTCACGCGCGCAGCACGCT
CTCGAGCGGGATCGGAAGCAGGGAACAGAGTGGCGATGGATACATCGGGG
ATTTGGGAGGCGGCGCTCAGACACGCGGTGGTGTCGGGCATTTGTTTCAA
CCTCTTCTACGACGTGTCGTTCAGGCTCTTGGGGCAGCTGCACCCCTTGA
CGCACGCGGTGGGCAACACTGTGAAGCGCATCGTCGTCATCAGCGCTGGC
GCAGCGGCGTTCGGGGGAGACTTTGGGGGACCAAGGGGGGCCATGGGGTC
GACGCTGGCGGTGGTCGGGGTGCTCGCCTTCTCCGTGGCAAAGACGAGGT
GCTAACTGGCTGGCCCTCCTCTGGGCACTCTCATCCAACCTTAGCAACGC
CCTGCGTAACGTGCTCGTCGTGAAGAACATCGGCGCGGCCGCCGCTGGTA
AGGTGTCCGATAAAGCCGGAGTTGTACGAGGGTGCTACGGTAGCAGCAGT
AGCAGTGATAGCAGGAGTGATGGCAAGTCTCCAAGATCCGTAAAAACTGG
GAGCATCGCATCCCGGACGGCCACGCCCGCCATGGGGCGGGAACGAAAGG
GGGGACTGATCGGTCTGTCCCCTGGAGACACTTACCGCCTAACCACAGTG
GTCGCGGCGATTATGTTGTTTCCCGTTTCCGTGTGCTTGGAGCACCGCTC
CTGGGCGAATCTCTGGCAAGGGGCAACAGACGCCGTCTCATCAGTGTTGA
CATTCACGCGCGCAGCACGCTCTCGAGCGGGATCGGAAGCAGGGAACAGA
GTGGCGATGGATACATCGGGGATTTGGGAGGCGGCGCTCAGACACGCGGT
GGTGTCGGGCATTTGTTTCAACCTCTTCTACGACGTGTCGTTCAGGCTCT
TGGGGCAGCTGCACCCCTTGACGCACGCGGTGGGCAACACTGTGAAGCGC
ATCGTCGTCATCAGCGCTGGCGCAGCGGCGTTCGGGGGAGACTTTGGGGG
ACCAAGGGGGGCCATGGGGTCGACGCTGGCGGTGGTCGGGGTGCTCGCCT
TCTCCGTGGCAAAGACGAGGTGCTAA
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