mRNA_H-elongata_contig5265.12578.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5265.12578.1
Unique NamemRNA_H-elongata_contig5265.12578.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: D8LEV0_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEV0_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 1.380e-68
Identity = 122/186 (65.59%), Postives = 142/186 (76.34%), Query Frame = 1 
Query:   34 MRATAVYLL-FLTSTTAFVPLAPTCRYVGSRRASSAAVAYRSSSSSSKALYMSFDFKDMIEKMSDTRYARVRHILVEEKGEEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWVESCNKPQNTWKMMYDEVIKTVKGDVDE 588
            MR T + LL  L S   FVP    CR   S   + A    R+S+SS   L M FDFK  +EKMSD RYARVRHILVEEKGEEGR++LE AK +I GD+DKFSEVAE +STCTSAP+GGRLKLLARGETVP FD++AF GELGVVHGPVET FGTHLI+VESCNKPQNTWKM++D+++  V G  +E
Sbjct:    2 MRETILLLLCVLVSVAGFVPAPSICRNARSAVGTPA----RTSTSS---LSMGFDFKGTLEKMSDPRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCNKPQNTWKMLFDDIVDKVSGKEEE 180
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BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A7S2HC75_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HC75_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 5.130e-16
Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = 1 
Query:  235 ARVRHILVEEKGEEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWVE 510
            A   HIL++    E   +++A K +IG DV KF+E A   S C S  +GG L    R   VP FD+V F  E+GVVHGP+ T+FG HLI++E
Sbjct:   18 AEASHILIKGTDAEAEQKIKAIKEEIGNDVTKFAEAATQHSDCPSGRQGGSLGEFGRYSMVPEFDKVVFNEEVGVVHGPIRTSFGFHLIFIE 109
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BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A7R9W6N6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6N6_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 7.050e-15
Identity = 45/109 (41.28%), Postives = 62/109 (56.88%), Query Frame = 1 
Query:  193 DFKDMIEKMSDTRYARVRHILVEEKGEEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWVESCN 519
            D KD +  +  T  A   HIL++      + +++  K +IG D DKF+E+A   S C S  +GG L    R   VP FD+V F  E+GVVHGP+ET+FG HLI +   N
Sbjct:   62 DAKDFLSGL--TMRAEASHILIKGTDSGAKRKIDDIKKEIGNDSDKFAELAALTSDCPSGQQGGSLGEFGRYSMVPEFDKVVFNEEVGVVHGPIETSFGYHLILIHRRN 168
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BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: R1EID3_EMIHU (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EID3_EMIHU)

HSP 1 Score: 82.4 bits (202), Expect = 7.580e-15
Identity = 50/122 (40.98%), Postives = 75/122 (61.48%), Query Frame = 1 
Query:  208 IEKMSDTRYARVRHILVEEKG----EEGRARLEAAKIDIGGDVDKFSEVAESISTCT-SAPKGGRLKLLARGETVPA-FDEVAF-KGELGVVHGPVETTFGTHLIWVESCNKPQNTWKMMYD 552
            I++M D R A+V HIL++  G    EE RA+ EA K++IGGD DKF+EVA  +S C  ++ KGG L    R + +P   D+V F K  +  V+GP+ T  G HL+++ SC +P    + ++D
Sbjct:   50 IQQMIDQRVAKVSHILMKPGGSMTIEEARAQFEAWKVEIGGDSDKFAEVARRVSECEQTSEKGGDLGYCTRLKQLPRQIDDVVFVKEPVPGVYGPIGTKQGLHLVYLHSCGEPMGRTEALFD 171
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BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A7S1Y1S1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y1S1_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 4.640e-14
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 1 
Query:  226 TRYARVRHILVEEKGEEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWV 507
            T+ A   HIL++  G E   +LE  K++I     KF+E A   S+C SA KGG L     G+ V  FD+V F  ++GVVHGP++T FG HLI+V
Sbjct:   44 TQKASASHILIK-GGPEAANKLEELKVEIDNSPVKFAEAASRFSSCPSARKGGELGEFGPGQMVKEFDQVVFNDDVGVVHGPIKTQFGYHLIYV 136
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BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A7S3V5S0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5S0_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 9.860e-14
Identity = 42/95 (44.21%), Postives = 56/95 (58.95%), Query Frame = 1 
Query:  235 ARVRHILVE----EKGEEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWV 507
            A+  HIL+     E  EE R +L   K +IG D +KF++ A  IS C SA KGG L     G+ V  FD+V F  ++G+VHGP+ T FG HLI +
Sbjct:   58 AKCSHILIGPRDWESEEEAREQLARLKTEIGNDPEKFAQAASRISGCPSAKKGGDLGEFGPGQMVKNFDKVVFNEDVGIVHGPISTQFGEHLILI 152
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BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A6U6D7J0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6D7J0_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.550e-13
Identity = 41/95 (43.16%), Postives = 54/95 (56.84%), Query Frame = 1 
Query:  235 ARVRHILVEEKGEEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWVESCN 519
            A   HILV+  G E   ++   K +IG D +KF++ A   S C S  +GG L    R   VP FD+V F   +GVVHGP+ET FG HLI ++  N
Sbjct:   70 AEASHILVKGTGPESLRKINDIKKEIGDDPEKFADAAAQNSDCPSGQQGGSLGEFGRYSMVPEFDKVVFNENVGVVHGPIETGFGYHLILIQRRN 164
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BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A7S3PZX5_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZX5_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.370e-13
Identity = 48/103 (46.60%), Postives = 57/103 (55.34%), Query Frame = 1 
Query:  247 HILVEEKGEEGRARLEAAKIDI----------GGDVDK------FSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWV 507
            HIL+  KG     + E  K+DI          GG VD       FS+ A   STC S  KGG L   ARGE VP FD VAF  ++GV+HGPV+T FG+HLI V
Sbjct:   52 HILL--KGSNANQQCEKLKMDIYKTAMNKGASGGGVDPEALMSAFSQAASRRSTCPSKNKGGSLGTFARGEMVPEFDAVAFGDDVGVIHGPVDTQFGSHLILV 152
[Close]
BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A7S1BG89_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BG89_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.430e-13
Identity = 44/95 (46.32%), Postives = 55/95 (57.89%), Query Frame = 1 
Query:  235 ARVRHILVEEKG----EEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWV 507
            AR  HILV  K     EE + RL   K ++G D  KF+E A S S+C S  KGG L     G+ V  FD+V F  ++GVVHGP+ T FG HLI +
Sbjct:   57 ARASHILVGPKNWDSQEEAKDRLLRLKEEVGNDPTKFAEAAASNSSCPSKAKGGDLGEFGPGQMVKNFDKVVFNEDVGVVHGPISTQFGEHLILI 151
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BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A194AEB5_9DELT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Desulfoplanes formicivorans TaxID=1592317 RepID=A0A194AEB5_9DELT)

HSP 1 Score: 75.1 bits (183), Expect = 3.180e-13
Identity = 46/91 (50.55%), Postives = 54/91 (59.34%), Query Frame = 1 
Query:  235 ARVRHILVEEKGEEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWV 507
            AR RHILV       R   E  K DI    D F+EVA + STC S  +GG L    + E VP F+EV F G++GVVHGPV+T FG HLI V
Sbjct:    4 ARARHILVPT-----RETCEQLKQDIMNGQD-FAEVAAAHSTCPSGRRGGDLGTFGKEEMVPEFEEVVFTGDVGVVHGPVQTQFGFHLIEV 88
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEV0_ECTSI1.380e-6865.59Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectoca... [more]
A0A7S2HC75_9STRA5.130e-1645.65Peptidyl-prolyl cis-trans isomerase n=1 Tax=Helico... [more]
A0A7R9W6N6_9STRA7.050e-1541.28Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudi... [more]
R1EID3_EMIHU7.580e-1540.98Peptidyl-prolyl cis-trans isomerase n=2 Tax=Emilia... [more]
A0A7S1Y1S1_9STRA4.640e-1444.68Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gramma... [more]
A0A7S3V5S0_9STRA9.860e-1444.21Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chaeto... [more]
A0A6U6D7J0_9STRA1.550e-1343.16Peptidyl-prolyl cis-trans isomerase n=1 Tax=Odonte... [more]
A0A7S3PZX5_9STRA2.370e-1346.60Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chaeto... [more]
A0A7S1BG89_9STRA2.430e-1346.32Peptidyl-prolyl cis-trans isomerase n=1 Tax=Coreth... [more]
A0A194AEB5_9DELT3.180e-1350.55Peptidyl-prolyl cis-trans isomerase n=1 Tax=Desulf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5265contigH-elongata_contig5265:840..5980 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score225.7
Seed ortholog evalue1.8e-56
Seed eggNOG ortholog2880.D8LEV0
EggNOG free text desc.PPIC-type PPIASE domain
EggNOG OGs2SBZU@2759,COG0760@1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionPeptidyl-prolyl cis-trans isomerase, PpiC-type
Ec32 orthologEc-21_005670.1
Exons3
Model size1183
Cds size564
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5265.12578.1prot_H-elongata_contig5265.12578.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5265 1426..5947 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930860.224296-UTR-H-elongata_contig5265:839..14251622930860.224296-UTR-H-elongata_contig5265:839..1425Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5265 840..1425 -
1691679601.2517834-UTR-H-elongata_contig5265:839..14251691679601.2517834-UTR-H-elongata_contig5265:839..1425Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5265 840..1425 -
1622930860.2951727-UTR-H-elongata_contig5265:5947..59801622930860.2951727-UTR-H-elongata_contig5265:5947..5980Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5265 5948..5980 -
1691679601.3007178-UTR-H-elongata_contig5265:5947..59801691679601.3007178-UTR-H-elongata_contig5265:5947..5980Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5265 5948..5980 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930860.2452517-CDS-H-elongata_contig5265:1425..15561622930860.2452517-CDS-H-elongata_contig5265:1425..1556Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5265 1426..1556 -
1691679601.272814-CDS-H-elongata_contig5265:1425..15561691679601.272814-CDS-H-elongata_contig5265:1425..1556Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5265 1426..1556 -
1622930860.2636096-CDS-H-elongata_contig5265:1939..20331622930860.2636096-CDS-H-elongata_contig5265:1939..2033Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5265 1940..2033 -
1691679601.2809603-CDS-H-elongata_contig5265:1939..20331691679601.2809603-CDS-H-elongata_contig5265:1939..2033Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5265 1940..2033 -
1622930860.2787213-CDS-H-elongata_contig5265:5608..59471622930860.2787213-CDS-H-elongata_contig5265:5608..5947Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5265 5609..5947 -
1691679601.2895546-CDS-H-elongata_contig5265:5608..59471691679601.2895546-CDS-H-elongata_contig5265:5608..5947Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5265 5609..5947 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5265.12578.1

>prot_H-elongata_contig5265.12578.1 ID=prot_H-elongata_contig5265.12578.1|Name=mRNA_H-elongata_contig5265.12578.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=188bp
MRATAVYLLFLTSTTAFVPLAPTCRYVGSRRASSAAVAYRSSSSSSKALY
MSFDFKDMIEKMSDTRYARVRHILVEEKGEEGRARLEAAKIDIGGDVDKF
SEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETT
FGTHLIWVESCNKPQNTWKMMYDEVIKTVKGDVDENQ*
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mRNA from alignment at H-elongata_contig5265:840..5980-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5265.12578.1 ID=mRNA_H-elongata_contig5265.12578.1|Name=mRNA_H-elongata_contig5265.12578.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5141bp|location=Sequence derived from alignment at H-elongata_contig5265:840..5980- (Himanthalia elongata Himel1 dioecious)
CGCTCTCTCTCTAGCGAAAGTCACGACGGCACCATGAGGGCAACCGCTGT
ATACCTATTATTTCTAACGTCTACGACGGCGTTCGTCCCTTTAGCTCCCA
CCTGCCGCTATGTGGGATCGAGGAGAGCGAGCTCTGCTGCGGTCGCCTAT
CGATCGAGTAGCTCTTCTTCCAAGGCTCTCTACATGAGCTTTGACTTCAA
GGACATGATCGAGAAAATGAGCGACACCCGGTACGCAAGGGTGCGGCACA
TCTTGGTGGAAGAGAAAGGCGAAGAAGGGCGAGCGCGGTTAGAGGCGGCC
AAGATTGATATTGGAGGCGATGTGGACAAATTCTCCGAGGTGGCTGAGAG
TATTTCGACCTGCACCAGTGCGGTACGTCAGTGGGCTGGCTCTTGGGGGG
TGGGAAGAGAGTGACGTCTATGTGCGAGCGGCGGCGCAGTTGCTGCTGGG
CGTCGGTTTCCTGTTTGTTTTGCAGCGGTTCCGTTCTTATGCTAAACATG
CGTATTGGGTAGTTATTGGTCCTGTTGATGCTCGAAGAACTACATGCTTT
GCTATAAACACTGACTTACAGAACTGTCCTTCGGAGTTCCAATGTAGTTG
GTAGCCAAGGATGTTTTTCTTTAACTCTATAATGTATACTACGTTTACTG
TTCAACTGGAACTAGTTCTGGATCTGTTTCTTTCTTGAACCTCTGAAAAC
GCTCTCTTCCTCTCCGAAAACCTGTCATATAAATGGTGAAACCTGGGGGA
ACTCGGAAGTAGCGGCGGGTTCATGTTGGTGGAGACTGCCAACATAAGAA
ACTGGATTCCTCGATCGTCGTGTCGGGTAGAATCAGAGAAACCCAACGAT
CCATAGTACTGGACCCCCGAGATATAGAATTCGTATCTCACGCTTTACCT
CGCGGGCGGCATACTGGTTAATTGTGGGTTATGGCCCTCTAACGGCCTCG
GTATGGATATTTGCCTTTCTGTTTCTTTCCTTAGACGAAACAATTGGCTC
CCATTCGTTTGATTATCCTATCTAGGCTCGGACTCCAGAAAGGACCTTAC
ACGTTTCTAATAACTACAAAATTCAATTAGATATATGAATATACAACCAC
ATACGATATTAATATACATATATCATACTAGTACCATGTAATGAAGTGCC
TTCCTAACCATTACATTCCACGTCTCGCGAGACCAAAATATCAGGGGCGA
ACGGGGACAGGGAAAATGATCTTCCCTGCTCAGCTGACCACGAGCAGAAG
GAAACCAAATCCGGTTGATCCTTACACTGCTAAATGTGCGCCATACATAC
ATACATACATACAAAGTAGGAAATGTACAAGTAGAGAGAGTGTGTCCCCT
TTGTCGCGTTTTATCAGAGGTTTTCGTAATAAGTGCCATTGATCTCCCCC
ATAGGAGGATCGATGCGAGTGGCATAGAATGACGAGGATGACAGGGCAGG
GCCGGATTGCGCGGTTATGTGCAATTTAACAAATATACATACATACCCTA
TAGGCTTTGGCGTCACGTCCCCATATGATAAATAATGACGCACCTACAAC
ATGAAATCAATCGAAATACATGATCACTCTCTACATGCTATGTCTAACCC
TTTCTAACCACCACACACAGTTCACTCCCTATATTCTGGTTTAGTATCCC
AATATGATGAATAATCACATGACGATTTTGAGCTTAAATGCAAATAAATG
TATATAAAATATCCACATTCGAACCTGACGATAGTTGGTCCCCTGGACTA
CACCACGCATGGTGCTAAGAAGGCGTGGATGTTCGGAGGGTTGAAAGGAG
CTCATATGTTTTTCCATAATTATATTATGCGTACGCACTCTTACGCCAAT
TGCAGAGGGTACACCCATAAAGTCTACGTGGGATCTTTGATATATAAACT
AGGTTCTAGATGATATTGTGATTGCCCAAATGTCCACATGTACTCAGTGG
TGGGCATAGCTGTGTGGCCGTGGTGCTACTTCAGCAATAAGGAGAGAGTA
GGGGGGCGTGAACAGCATAACACCGCCCTAAAGTTTTCCTTCTAGATGCC
AGCACAACATCACCACACCTTTTTCATATTCCTTCTTTGTAAAAGGTAAA
CTGCCAGTAAAAACATCACCCCCCTTCTGTTGGCTCTTGTGGCATGAAGC
TGTAAAACTGCCTATTATTTATGGGGCATGAGGGAGTTCATACAGTTCGT
TCTGTAAGCTCCGAAACTTCGGCCGAGAAGCCTTGCCTCTCTGAAGAGTA
GGTAAAACGCATTGCATTCTTGCTATACAGGATGCCTGCTGAACAACAGA
TTATTGGAAAACCCTAGAGTAACGATAGACCACTCCGCTAGGCCGCCAGG
AGTATTCATGGGCATATGATAGCCAGAGGGTATAACACTGTGTATGTATG
TATGTGTGTGTGTTTGTGTGTCTGTGTAAGCGGGCGCTTATGCGTTAGCG
CGGAGATCAAAGTCCCTTTGCTGCAATTGGAGTATTGCCGCTCCCGCTGA
ATGTACAACAACTGATTAACCGGTGTGTCCAATTAATCTATGGTATGTCC
GATTTGGCGTAGCAAACGCAAATGTAATGAATCGAAGCTGGTCATCATCC
TTGTGAAATACGGCCGGTATATTGCTCCGTCCCGGCATTGTTGGGATGCA
TGGTCTATGTCCATTGGGATACGATGTGGGAATCTCAGAAGTACGCACCT
CCCCCCGACCCCAAACCTTAAACTGCTCTAGCGCTGATTGATTTGTCTGA
TTTGATCTTCATAATCGATCGCTTTGAGGTTTTAATGTCGTTTCATGAGA
GCTCGACACACGATTACGAGCACACGGTAATATGTTTTTTGCCCAATTGG
ACACTGTTTACCCAATACTGGCCCGTAGCGTCGCGGGAAACTCCGCGACC
CCTGTTAATTCCTCTTGCCATATTGTCTCCCCCGCCATACGCTTCGATGA
TACCTTTTCACTTGACTTTTCCTGTAGTCTAGGGGTGACCACGTACATAT
CTAGTGCGGAAATTATGGGTTCGAATCCCACCAGGGCTGTGTGATTTATT
TTATTTCTGTAGCGGTCATAGTCTATACCGGTACACAGTGCTGTTTTAAT
AGTCTAAAACGGGAGAATGTGTAATGAGTACAAGCAAAGTTCGACCATTG
TTTGACGAGGCGTAGGGGTGCTGTTAATGACTTGCATCGCGATAAAAAAA
ACTGCTGGAGGCGTGAACGAACCCGGGGGAAAGATGAGTTGATCTATTAT
GACCACATTCGGGATGAGCACGTTGAATGGACCTATCGGTAGATACACAA
TACAATGTTTTCGTGAGCTGATGGTTTTGGCTTCCAGTATACAGGCAACG
CCTGGCACAGCCCCCGCGAGGATGGCCGATGTAGTCTCTAACTGTTGCCT
GCCGATGTTTTTTCCTAGACCAACAACCGTACGCCGCCGATTGGATCATC
GGACCGTTGAACGACACACTCTGAGACTTCGTTTGGATTCGTGTAAATAT
TATTTAATGACCGAAAACAACGTCATCCCCCCCCAAATGTACGTACTAAT
ATTTAACAGCTGTGTCCGATACACGATCAATATATGTTTTATTTTAGCAT
TTCGTCTTTCAACTAACTTAACTAACTACCTTTTGGGTGTAAAATAGTAG
ATAGTGTAATGAAGCACTTGCCCCACTTTCATCGTGGGAAGCTGTATTTT
TGATATTTTAAATAGTGTTAAGCTCCCTTCCGGTGTTGTCATAATCACAA
CACACTGTCTGTCTTGTTTTTTAACGACAAATTACTGTTTTGTACGAAGC
ATCAGTATTGGAAAACAGTCGAGATAAACCCGCCGTCAGTCAAACTTCAA
AACAAATCTTAAATCCAACCTCTCGTTTCTCGACACGCTGTCCTGCCAAT
TTATTGCCTCCCTATTGTGAAACTGCGATTGGAAAACCCATGCGCAGCCG
AAGGGTGGGCGGCTGAAGCTCCTGGCCCGGGGGGAGACGGTACCTGCTTT
CGACGAGGTCGCTTTCAAGGGAGAGCTCGGAGTGGTGCATGGTAAGTGAT
TTTTGCGGCGGGGTCGAAACAGCTCACTGTGTATCTCACAGAGCTAAGGC
AGGGTTGCCTCGCTCGTGGAAAATTTCGCCGTGGCAATACCGGTTTTGCC
ATCCATCACCTTGCTGCGGTGAGGTAAAAGACTGAGTCGCCGTTGGTTCC
ATCATTTCGACGATGCGATTCTTGAACAGGAGCAACGTCTTACCCGCCTT
ATGGCGCGCGTGTGCTTTCTCTTGGTCAATGTGCGGTGTGGTCGGGCTCA
GACAACGTTGTTGAAGCATCTCTCTCTTTTCGCCGCAGCGCTAATTCTAT
GGTCACCACATATAGCTGCTGAGTATCGGTATTGGTGATGATAATGTTCG
TGCCGCTGGTCGCGTTCTCGTCAGGCCCCGTCGAGACAACGTTCGGGACT
CACCTGATCTGGGTTGAAAGTTGCAACAAGCCACAGAACACGTGGAAAAT
GATGTACGACGAGGTGATCAAAACCGTCAAGGGAGACGTGGATGAAAATC
AGTAATCGAACGGAGCAGAGTTCTCAAGGCGACGCAAGGGGGAGGGGGGG
GGCAGGGCGGGGGGAAATAGACGGATAGTGCGCGGGCCGGGGCAGGGCGT
TGCAGGCAACTTAATTGATACAGAAGTGCATGGATGACAGGGGTACCCAA
GAGACTGGGAACATCCCTATCGATCGTAAGTCTCTCAGCGGTGTGTTCGT
GGGAGGAGGACGTTATACGAGCCTTTGTCAAGGCGGTACAAACCTACCAT
ATAGCAGATTGTTGATCACTATAATAGTAGCATACCGGTAGCATATAGAT
GTCAAACAATTATGGTTCAGGGAAATAGTTACGATTCGCGGTAACGGTCA
AAAGATCGAGTGCTGTACCATTTACCTCGACTACTGCTCTCTCGTCTCAT
ATGGCCAATAAATCAAGTGGTGTCTTTTATATCTACACATCCATACACTC
TTCAACTTGTTAGCCTGATCGCTTACTATATCCTTGTTTGCCGCATGAAT
ATACGCTAAAGCGTATCTGGTGCGATTCTTCTGGGATCTACAGCAGCATA
TATATGCAAAATATGTTTTGACATTTTTCGACCCTTCGATT
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Coding sequence (CDS) from alignment at H-elongata_contig5265:840..5980-

>mRNA_H-elongata_contig5265.12578.1 ID=mRNA_H-elongata_contig5265.12578.1|Name=mRNA_H-elongata_contig5265.12578.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1128bp|location=Sequence derived from alignment at H-elongata_contig5265:840..5980- (Himanthalia elongata Himel1 dioecious)
ATGAGGGCAACCGCTGTATACCTATTATTTCTAACGTCTACGACGGCGTT
CGTCCCTTTAGCTCCCACCTGCCGCTATGTGGGATCGAGGAGAGCGAGCT
CTGCTGCGGTCGCCTATCGATCGAGTAGCTCTTCTTCCAAGGCTCTCTAC
ATGAGCTTTGACTTCAAGGACATGATCGAGAAAATGAGCGACACCCGGTA
CGCAAGGGTGCGGCACATCTTGGTGGAAGAGAAAGGCGAAGAAGGGCGAG
CGCGGTTAGAGGCGGCCAAGATTGATATTGGAGGCGATGTGGACAAATTC
TCCGAGGTGGCTGAGAGTATTTCGACCTGCACCAGTGCGATGAGGGCAAC
CGCTGTATACCTATTATTTCTAACGTCTACGACGGCGTTCGTCCCTTTAG
CTCCCACCTGCCGCTATGTGGGATCGAGGAGAGCGAGCTCTGCTGCGGTC
GCCTATCGATCGAGTAGCTCTTCTTCCAAGGCTCTCTACATGAGCTTTGA
CTTCAAGGACATGATCGAGAAAATGAGCGACACCCGGTACGCAAGGGTGC
GGCACATCTTGGTGGAAGAGAAAGGCGAAGAAGGGCGAGCGCGGTTAGAG
GCGGCCAAGATTGATATTGGAGGCGATGTGGACAAATTCTCCGAGGTGGC
TGAGAGTATTTCGACCTGCACCAGTGCGCCGAAGGGTGGGCGGCTGAAGC
TCCTGGCCCGGGGGGAGACGGTACCTGCTTTCGACGAGGTCGCTTTCAAG
GGAGAGCTCGGAGTGGTGCATGCCGAAGGGTGGGCGGCTGAAGCTCCTGG
CCCGGGGGGAGACGGTACCTGCTTTCGACGAGGTCGCTTTCAAGGGAGAG
CTCGGAGTGGTGCATGGCCCCGTCGAGACAACGTTCGGGACTCACCTGAT
CTGGGTTGAAAGTTGCAACAAGCCACAGAACACGTGGAAAATGATGTACG
ACGAGGTGATCAAAACCGTCAAGGGAGACGTGGATGAAAATCAGTAAGCC
CCGTCGAGACAACGTTCGGGACTCACCTGATCTGGGTTGAAAGTTGCAAC
AAGCCACAGAACACGTGGAAAATGATGTACGACGAGGTGATCAAAACCGT
CAAGGGAGACGTGGATGAAAATCAGTAA
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