mRNA_H-elongata_contig52545.12561.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig52545.12561.1
Unique NamemRNA_H-elongata_contig52545.12561.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: D7G6V6_ECTSI (Cysteine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V6_ECTSI)

HSP 1 Score: 441 bits (1134), Expect = 5.010e-153
Identity = 218/246 (88.62%), Postives = 233/246 (94.72%), Query Frame = 1
Query:    1 VEYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
            VEYLNPGG+SKDRIAASMI+EAEA+G+L +GGTVVEGTSGSTGICLASLCRAKGYRC+IVMPDDQA EKV+LL TFGAEVIQVRTASIANPDHYINVAAR+A ERPG VFMDQFET ANLKAHLA+TGPEIWEQT GRLDAFVMGAGTGG LAGVS+FLR KGC AKVYLVDPPGSALFNRVR+G CYS QMSER+VRKHRYDTIAEGIGNDH+TGNF KAILDDAFRVSDQEAVYMAHYLL++EG
Sbjct:  103 VEYLNPGGTSKDRIAASMIKEAEATGELKQGGTVVEGTSGSTGICLASLCRAKGYRCVIVMPDDQAGEKVELLRTFGAEVIQVRTASIANPDHYINVAARLARERPGYVFMDQFETEANLKAHLAHTGPEIWEQTNGRLDAFVMGAGTGGCLAGVSLFLRGKGCPAKVYLVDPPGSALFNRVRHGVCYSPQMSERDVRKHRYDTIAEGIGNDHVTGNFGKAILDDAFRVSDQEAVYMAHYLLKHEG 348          
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A835Z4W8_9STRA (Putative cysteine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W8_9STRA)

HSP 1 Score: 356 bits (914), Expect = 3.600e-120
Identity = 171/246 (69.51%), Postives = 205/246 (83.33%), Query Frame = 1
Query:    1 VEYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
            VE+LNPGG+ KDR+AA+MIE AEA+G L  GGTVVEGTSGSTGI LAS+CRA+G+RC+IVMPDDQA EK  +L T GA V+QV+TA+IA+P+HY+N A R+A+E  GAVFMDQFET AN   H A T PEIW QTGG LDAFVMGAGTGGS+AGVS +L+ +    +VYLVDPPGS+LFNRV++G CY+ Q +ER VR+HRYDT+AEGIG D +T NFAKA +DDAF +SDQEAV MAHYLLR+EG
Sbjct:   71 VEFLNPGGTGKDRLAAAMIEAAEAAGLLKPGGTVVEGTSGSTGISLASICRARGFRCVIVMPDDQAGEKKAMLETLGATVVQVKTAAIASPEHYVNAARRIAAETLGAVFMDQFETSANFNVHYARTAPEIWSQTGGALDAFVMGAGTGGSIAGVSAYLKERRRGIRVYLVDPPGSSLFNRVKFGVCYAAQQAERAVRRHRYDTLAEGIGLDRVTANFAKATIDDAFAISDQEAVTMAHYLLRHEG 316          
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A7S2RC68_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RC68_9STRA)

HSP 1 Score: 321 bits (822), Expect = 2.640e-106
Identity = 161/253 (63.64%), Postives = 194/253 (76.68%), Query Frame = 1
Query:    4 EYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERP--------GAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
            EYLNPGG+ KDRIA +MIEEAE  G+L  GGTVVEGTSGSTGI LA+LC  +GYRC+IVMPDDQ+ EK +LL  FGAEV+ VRTASI+NP HY+NVA ++A            G  F DQFET+AN  AH+A TGPE+W+QT G+  AFVM AGTGG++AGVS FL+ K    KV L DPPGS+LF+ V++G C++ Q SER VR+HRYDTIAEGIG D LT N  +A +DDA  VSDQEA+YMAHYLL++EG
Sbjct:   52 EYLNPGGTGKDRIALAMIEEAERRGQLAPGGTVVEGTSGSTGIALAALCACRGYRCVIVMPDDQSPEKQRLLRQFGAEVLVVRTASISNPQHYVNVARKLAKGEEVAGHHLPGGGYFTDQFETLANYHAHVATTGPELWQQTQGQCHAFVMSAGTGGTIAGVSRFLKSKNPGIKVVLADPPGSSLFHFVKHGVCWAPQQSERTVRRHRYDTIAEGIGLDRLTRNIQEAEIDDAIAVSDQEALYMAHYLLKHEG 304          
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A6V1K2C6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K2C6_HETAK)

HSP 1 Score: 320 bits (821), Expect = 1.550e-105
Identity = 157/245 (64.08%), Postives = 190/245 (77.55%), Query Frame = 1
Query:    4 EYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
            E+LNPGG+ KDRIA  MIEE E  G L EGGTVVEGTSGSTGI LA +CRA+GYRC+IVMPDD +  KV LL  FGAEV  V+ ASIANP H+  VA  +A +  GAVFMDQF T  N +AH   TGPEIW QT G+++AFVMGAGTGG++AGVS FL++K  + KV+LVDPPGS+LF+RV++G CY+ + SE+ VRKHRYD+I EG+G D LT NF KA +DDA+++ DQ  V MAHYLLR EG
Sbjct:  102 EHLNPGGTGKDRIALQMIEECEKRGLLREGGTVVEGTSGSTGISLALVCRARGYRCVIVMPDDTSQTKVDLLRMFGAEVKVVKAASIANPKHFCKVAEELAKKIDGAVFMDQFNTGFNYRAHYLGTGPEIWRQTRGQVNAFVMGAGTGGTIAGVSKFLKKKNPKVKVFLVDPPGSSLFHRVKHGVCYTPEQSEQRVRKHRYDSIVEGVGLDRLTQNFLKAAIDDAYKIPDQTTVQMAHYLLRKEG 346          
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A067D0S0_SAPPC (PALP domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D0S0_SAPPC)

HSP 1 Score: 311 bits (798), Expect = 1.470e-102
Identity = 151/245 (61.63%), Postives = 187/245 (76.33%), Query Frame = 1
Query:    4 EYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
            E+LNPGGSSKDR+A  ++E+AEA G L+ GGT+VEGTSGSTGI LA + RAKGY+C+IVMPDDQA EK  LL  FGA V  V+ ASI N  HY+N A R ASE PG  F DQFE +AN   H   TG EIWEQT G +DA+VM AGTGG++AGVS++L+ K    ++ L DPPGS+L+N+VR+  CY+ Q SER V++HRYDTIAEGIG D LT NF +A +DDA+RV+DQEA+ M+ YLL+ EG
Sbjct:   70 EFLNPGGSSKDRVAKGIVEDAEARGLLSPGGTIVEGTSGSTGISLALIARAKGYKCLIVMPDDQAKEKSDLLTQFGATVEFVKPASIVNAKHYVNQARRRASEIPGGYFADQFENLANCDVHYHTTGREIWEQTNGHVDAYVMSAGTGGTIAGVSLYLKEKNPNVQIILADPPGSSLYNKVRHNVCYAPQQSERTVKRHRYDTIAEGIGIDRLTANFTRAAIDDAYRVTDQEAIDMSRYLLQEEG 314          
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A4D9DD93_9STRA (PALP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DD93_9STRA)

HSP 1 Score: 311 bits (796), Expect = 8.530e-102
Identity = 162/252 (64.29%), Postives = 194/252 (76.98%), Query Frame = 1
Query:    1 VEYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPG--AVFMDQFETMANLKAHLANTGPEIWEQT----GGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
            VEYLNPGG+SKDR+A  MI+EAE +G L  G TV+EGTSGSTGI LASLCRA+GYRC+IVMPDDQAAEK  LL  FGAEV  V+ ASIANP+HY N  AR  +E  G  AV+MDQFETMAN +AH   TGPE+WEQ     G R DAFVM AGTGG+LAGVS   + +  + +V+LVDPPGS+L+++V++G CYS    ER VR+HRYD++AEGIG D LT NF KA +D+AF V DQEAV MAH+LL+ EG
Sbjct:   88 VEYLNPGGTSKDRVALRMIQEAEKAGLLHPGSTVIEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKAHLLKQFGAEVEIVKPASIANPNHYCN-RARARAEELGDEAVYMDQFETMANFRAHYEGTGPEMWEQVMAGYGARPDAFVMSAGTGGTLAGVSRAWKEREEKVQVFLVDPPGSSLYHKVKHGVCYSTAQRERGVRRHRYDSLAEGIGLDRLTANFRKARIDEAFHVPDQEAVDMAHFLLQAEG 338          
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A485LMB3_9STRA (Aste57867_23202 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LMB3_9STRA)

HSP 1 Score: 308 bits (789), Expect = 3.610e-101
Identity = 155/245 (63.27%), Postives = 185/245 (75.51%), Query Frame = 1
Query:    4 EYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
            E+LNPGGSSKDR+A  +IE+AEA G LT GGT+VEGTSGSTGI LA L RAKGY+CIIVMPDDQA EK  LL  FGA V  V+ ASI N  HY+N A R ASE PG  F DQFE +AN + H   TG EIWEQT GR+DAFVM AGTGG++AGVS +L+ +    +V L DPPGS+L+N+VR+  CY+ Q SER V++HRYDT+AEGIG D LT NF  A +DDA+ V+D EAV MA +LLR +G
Sbjct:   73 EFLNPGGSSKDRVAKGIIEDAEARGLLTPGGTIVEGTSGSTGISLALLARAKGYKCIIVMPDDQAKEKSMLLEQFGATVEFVKPASIVNAKHYVNQARRRASEIPGGYFADQFENLANTEIHYRTTGREIWEQTNGRVDAFVMSAGTGGTIAGVSRYLKEQNPSIQVVLADPPGSSLYNKVRHNVCYAPQQSERTVKRHRYDTVAEGIGIDRLTANFLHAEIDDAYLVTDNEAVEMARHLLREDG 317          
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A1W0A6Y0_9STRA (Cysteine synthase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6Y0_9STRA)

HSP 1 Score: 307 bits (786), Expect = 9.940e-101
Identity = 152/245 (62.04%), Postives = 183/245 (74.69%), Query Frame = 1
Query:    4 EYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
            E+LNPGGSSKDR+A  ++E+AE  G L  GGT+VEGTSGSTGI LA + RAKGY C+IVMPDDQA EK  LL  FGA V  V+ ASI N +HY+N A + A+E  G  F DQFE  AN   H   TG EIWEQT G++DAFVM AGTGG++AGVS++L+ K    +V L DPPGS+L+N+VRY  CY+ Q SER V++HRYDTIAEGIG D LT NF KA +DDA+ V+DQEAV M+ YLL NEG
Sbjct:   70 EFLNPGGSSKDRVAKGIVEDAEERGLLKPGGTIVEGTSGSTGISLALIARAKGYNCLIVMPDDQAKEKSDLLQQFGAVVEFVKPASIVNANHYVNQARQRANEIQGGYFADQFENEANCNVHYKTTGREIWEQTNGKIDAFVMSAGTGGTIAGVSLYLKHKNPNVQVVLADPPGSSLYNKVRYNVCYAAQQSERTVKRHRYDTIAEGIGIDRLTANFLKAKIDDAYAVTDQEAVDMSRYLLHNEG 314          
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: A0A1V9ZT20_9STRA (Cysteine synthase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZT20_9STRA)

HSP 1 Score: 306 bits (783), Expect = 3.110e-100
Identity = 152/245 (62.04%), Postives = 186/245 (75.92%), Query Frame = 1
Query:    4 EYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
            E+LNPGGSSKDR+A  ++E+AEA G L  GGT+VEGTSGSTGI LA + RAKGY+CIIVMPDDQA EK  LL  FGA V  V+ ASI N  HY+N A R A+E PG  F DQFE +AN   H   TG EIWEQT G++DAFVM AGTGG++AGVS++L+++    +V L DPPGS+L+N+VR+  CY+ Q SER V++HRYDTIAEGIG D LT NF +A +DDA+ VSDQEAV M+ +LL  EG
Sbjct:   74 EFLNPGGSSKDRVAKGIVEDAEARGLLAPGGTIVEGTSGSTGISLALIARAKGYKCIIVMPDDQAKEKSDLLEQFGATVEFVKPASIVNAKHYVNQARRRANEIPGGFFADQFENLANCDVHYRTTGREIWEQTNGKVDAFVMSAGTGGTIAGVSLYLKQQKPDIQVVLADPPGSSLYNKVRHNVCYAPQQSERTVKRHRYDTIAEGIGIDRLTANFTQAKIDDAYVVSDQEAVDMSRFLLHEEG 318          
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Match: W2RD14_PHYPN (PALP domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=W2RD14_PHYPN)

HSP 1 Score: 304 bits (779), Expect = 2.640e-99
Identity = 147/245 (60.00%), Postives = 183/245 (74.69%), Query Frame = 1
Query:    4 EYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLCRAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAARVASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGGSLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKHRYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG 738
            E+LNPGGSSKDR+A  ++E+AE  G L EGGT++EGTSGSTGI L+ + RA+GYRCIIVMPDDQA EK +LL  FGAEV+ V+ ASI N  HY+N A R+A    G  F DQFE  AN  +H   TGPEIW QT G +DAFVM AGTGG++AG S +L+ K    +V+L DPPGS+L+N+VR   CY+ Q +E +VR+HRYDTIAEG+G D LT NF  A +DDAF+V+DQE V M+ +LLR EG
Sbjct:   99 EFLNPGGSSKDRVAKGIVEDAERRGLLKEGGTIIEGTSGSTGISLSLMARARGYRCIIVMPDDQAKEKSQLLEQFGAEVVLVKPASIVNAKHYVNEAKRLARNTEGGYFTDQFENTANFDSHYTTTGPEIWRQTDGTVDAFVMAAGTGGTIAGTSAYLKEKNPDVQVFLADPPGSSLYNKVRSNVCYAPQQAETKVRRHRYDTIAEGVGIDRLTENFMLAKIDDAFKVTDQEIVEMSRFLLREEG 343          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52545.12561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6V6_ECTSI5.010e-15388.62Cysteine synthase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835Z4W8_9STRA3.600e-12069.51Putative cysteine synthase n=1 Tax=Tribonema minus... [more]
A0A7S2RC68_9STRA2.640e-10663.64Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V1K2C6_HETAK1.550e-10564.08Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A067D0S0_SAPPC1.470e-10261.63PALP domain-containing protein n=2 Tax=Saprolegnia... [more]
A0A4D9DD93_9STRA8.530e-10264.29PALP domain-containing protein n=2 Tax=Monodopsida... [more]
A0A485LMB3_9STRA3.610e-10163.27Aste57867_23202 protein n=1 Tax=Aphanomyces stella... [more]
A0A1W0A6Y0_9STRA9.940e-10162.04Cysteine synthase n=1 Tax=Thraustotheca clavata Ta... [more]
A0A1V9ZT20_9STRA3.110e-10062.04Cysteine synthase n=1 Tax=Achlya hypogyna TaxID=12... [more]
W2RD14_PHYPN2.640e-9960.00PALP domain-containing protein n=6 Tax=Phytophthor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52545contigH-elongata_contig52545:269..1779 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score441.4
Seed ortholog evalue2.7e-121
Seed eggNOG ortholog2880.D7G6V6
Preferred namecys12
KEGG rclassRC00020,RC02814,RC02821
KEGG koko:K01738
KEGG ReactionR00897,R03601,R04859
KEGG Pathwayko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00021
GOsGO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019867,GO:0030170,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0036094,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.cysteine synthase activity
EggNOG OGsCOG0031@1,KOG1481@2759
EC2.5.1.47
COG Functional cat.E
BiGG ReactioniRC1080.CRv4_Au5_s16_g6345_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCysteine synthase
Ec32 orthologEc-01_012080.1
Exons4
Model size740
Cds size738
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52545.12561.1prot_H-elongata_contig52545.12561.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig52545 269..1777 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930858.6263034-CDS-H-elongata_contig52545:268..4631622930858.6263034-CDS-H-elongata_contig52545:268..463Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52545 269..463 +
1691679600.5745456-CDS-H-elongata_contig52545:268..4631691679600.5745456-CDS-H-elongata_contig52545:268..463Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52545 269..463 +
1622930858.6495876-CDS-H-elongata_contig52545:758..9761622930858.6495876-CDS-H-elongata_contig52545:758..976Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52545 759..976 +
1691679600.5878751-CDS-H-elongata_contig52545:758..9761691679600.5878751-CDS-H-elongata_contig52545:758..976Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52545 759..976 +
1622930858.6666152-CDS-H-elongata_contig52545:1276..14651622930858.6666152-CDS-H-elongata_contig52545:1276..1465Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52545 1277..1465 +
1691679600.6014097-CDS-H-elongata_contig52545:1276..14651691679600.6014097-CDS-H-elongata_contig52545:1276..1465Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52545 1277..1465 +
1622930858.6811666-CDS-H-elongata_contig52545:1641..17771622930858.6811666-CDS-H-elongata_contig52545:1641..1777Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52545 1642..1777 +
1691679600.6101742-CDS-H-elongata_contig52545:1641..17771691679600.6101742-CDS-H-elongata_contig52545:1641..1777Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52545 1642..1777 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig52545.12561.1

>prot_H-elongata_contig52545.12561.1 ID=prot_H-elongata_contig52545.12561.1|Name=mRNA_H-elongata_contig52545.12561.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=246bp
VEYLNPGGSSKDRIAASMIEEAEASGKLTEGGTVVEGTSGSTGICLASLC
RAKGYRCIIVMPDDQAAEKVKLLNTFGAEVIQVRTASIANPDHYINVAAR
VASERPGAVFMDQFETMANLKAHLANTGPEIWEQTGGRLDAFVMGAGTGG
SLAGVSIFLRRKGCRAKVYLVDPPGSALFNRVRYGACYSYQMSEREVRKH
RYDTIAEGIGNDHLTGNFAKAILDDAFRVSDQEAVYMAHYLLRNEG
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mRNA from alignment at H-elongata_contig52545:269..1779+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig52545.12561.1 ID=mRNA_H-elongata_contig52545.12561.1|Name=mRNA_H-elongata_contig52545.12561.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1511bp|location=Sequence derived from alignment at H-elongata_contig52545:269..1779+ (Himanthalia elongata Himel1 dioecious)
GTTGAGTACCTGAACCCAGGGGGCTCGAGCAAAGATCGCATCGCCGCCAG CATGATAGAAGAGGCTGAGGCAAGCGGAAAGCTTACTGAGGGGGGAACAG TCGTGGAGGGCACCTCCGGGAGCACTGGGATATGTTTGGCCTCGCTCTGC AGGGCCAAGGGGTACCGGTGCATCATCGTGATGCCCGATGACCAAGTAAG CTTCCACTAAGCATGATGACTGTTTGAATCTTCCTGCTCAGAATACGAAA GAAACTCTCCTGTAGGCGTTTTTCTTTTAAAAAAACATGAACTCATTCCA ACCCTCTGAACATCCATGCCTTCTTAGCACCGTTAGAGGCCTTATGGTAG TGGAGGGTGGCTCAAAGCTTGCGCCAAATCCTCTCCCGACTGTCCTTACC GGAGCAGTTGCGACATGGCACGGGACGGGACATTTCCGTCACAAAAATCG CGATACCCGACGCCTTCGCCCCCCTGTAAAATAAAACCAGGCAGCGGAAA AGGTAAAGTTGTTGAACACCTTCGGAGCCGAGGTGATCCAAGTCCGAACT GCATCTATTGCGAATCCCGACCACTACATCAACGTTGCTGCGCGTGTTGC TTCCGAGCGCCCCGGAGCCGTGTTTATGGACCAATTTGAAACAATGGCTA ACTTGAAGGCACACCTTGCGAACACGGGCCCCGAGATATGGGAGCAGACT GGTGGGAGGTAAGAAAAGGTTCCGCTGTACGGACCCAGACCATTGCTAGT TACACAGCAGATACAGAATGGACGTGGGATATCGTGCTTCAGGATGACAC CAAAAGAGAGAAGTAACTTGCTCCCCGAGTCTCGGTTTATAATATAGTAG TAGTACGCTACAGTATATGTTGCATGTGCGGTTTTCGTTGTGTTACTCTC TTGATAATGCTGCCCACTGTTATTCACCATGGTCGCAGCATTTCCCTGTT GCGCTTTTTCGTCTGATGACATCTTACACGACGGCACACCGTGGCGACCG TTACGTAGGCTTGACGCCTTTGTCATGGGGGCGGGGACAGGCGGCTCCCT CGCCGGGGTATCCATATTTCTGCGTCGCAAGGGCTGTCGCGCCAAGGTGT ATCTTGTGGATCCACCAGGATCAGCGCTTTTCAACCGAGTGCGATACGGC GCATGCTACTCCTATCAGATGTCGGAAAGGGAGGTTCGTAAGCACAGGTG ACTAGGCCGTAGAAAGTATTCTTGGGGAAAATAACTATTAGCGTTCGTAG AAAAAGTCATCTTGCGCTTATGATCGTAACAAAGCACTGTTCATATAAGT AGCGCTGTCGCTGTGGAAATACCTGAACACGCGTGTCATGAGCGCTGCAC CCGCGACCTGTGTCAACTGCTAGGTACGACACAATTGCGGAGGGCATCGG CAATGACCACTTGACGGGCAACTTCGCTAAGGCCATCTTGGACGACGCCT TCCGAGTTTCCGACCAAGAAGCGGTGTACATGGCGCACTACCTACTTAGA AACGAAGGCGG
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Coding sequence (CDS) from alignment at H-elongata_contig52545:269..1779+

>mRNA_H-elongata_contig52545.12561.1 ID=mRNA_H-elongata_contig52545.12561.1|Name=mRNA_H-elongata_contig52545.12561.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1476bp|location=Sequence derived from alignment at H-elongata_contig52545:269..1779+ (Himanthalia elongata Himel1 dioecious)
GTTGAGTACCTGAACCCAGGGGGCTCGAGCAAAGATCGCATCGCCGCCAG
CATGATAGAAGAGGCTGAGGCAAGCGGAAAGCTTACTGAGGGGGGAACAG
TCGTGGAGGGCACCTCCGGGAGCACTGGGATATGTTTGGCCTCGCTCTGC
AGGGCCAAGGGGTACCGGTGCATCATCGTGATGCCCGATGACCAAGTTGA
GTACCTGAACCCAGGGGGCTCGAGCAAAGATCGCATCGCCGCCAGCATGA
TAGAAGAGGCTGAGGCAAGCGGAAAGCTTACTGAGGGGGGAACAGTCGTG
GAGGGCACCTCCGGGAGCACTGGGATATGTTTGGCCTCGCTCTGCAGGGC
CAAGGGGTACCGGTGCATCATCGTGATGCCCGATGACCAAGCAGCGGAAA
AGGTAAAGTTGTTGAACACCTTCGGAGCCGAGGTGATCCAAGTCCGAACT
GCATCTATTGCGAATCCCGACCACTACATCAACGTTGCTGCGCGTGTTGC
TTCCGAGCGCCCCGGAGCCGTGTTTATGGACCAATTTGAAACAATGGCTA
ACTTGAAGGCACACCTTGCGAACACGGGCCCCGAGATATGGGAGCAGACT
GGTGGGAGGCAGCGGAAAAGGTAAAGTTGTTGAACACCTTCGGAGCCGAG
GTGATCCAAGTCCGAACTGCATCTATTGCGAATCCCGACCACTACATCAA
CGTTGCTGCGCGTGTTGCTTCCGAGCGCCCCGGAGCCGTGTTTATGGACC
AATTTGAAACAATGGCTAACTTGAAGGCACACCTTGCGAACACGGGCCCC
GAGATATGGGAGCAGACTGGTGGGAGGCTTGACGCCTTTGTCATGGGGGC
GGGGACAGGCGGCTCCCTCGCCGGGGTATCCATATTTCTGCGTCGCAAGG
GCTGTCGCGCCAAGGTGTATCTTGTGGATCCACCAGGATCAGCGCTTTTC
AACCGAGTGCGATACGGCGCATGCTACTCCTATCAGATGTCGGAAAGGGA
GGTTCGTAAGCACAGGCTTGACGCCTTTGTCATGGGGGCGGGGACAGGCG
GCTCCCTCGCCGGGGTATCCATATTTCTGCGTCGCAAGGGCTGTCGCGCC
AAGGTGTATCTTGTGGATCCACCAGGATCAGCGCTTTTCAACCGAGTGCG
ATACGGCGCATGCTACTCCTATCAGATGTCGGAAAGGGAGGTTCGTAAGC
ACAGGTACGACACAATTGCGGAGGGCATCGGCAATGACCACTTGACGGGC
AACTTCGCTAAGGCCATCTTGGACGACGCCTTCCGAGTTTCCGACCAAGA
AGCGGTGTACATGGCGCACTACCTACTTAGAAACGAAGGCGTACGACACA
ATTGCGGAGGGCATCGGCAATGACCACTTGACGGGCAACTTCGCTAAGGC
CATCTTGGACGACGCCTTCCGAGTTTCCGACCAAGAAGCGGTGTACATGG
CGCACTACCTACTTAGAAACGAAGGC
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