mRNA_H-elongata_contig52543.12560.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig52543.12560.1
Unique NamemRNA_H-elongata_contig52543.12560.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig52543.12560.1 vs. uniprot
Match: A0A6H5LCT1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCT1_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 1.060e-39
Identity = 91/222 (40.99%), Postives = 125/222 (56.31%), Query Frame = 1
Query:    4 GFRVLGSYCEQLKISSPGTVCDVEWDSGGRFERCFVMLGLSAHVAVHSPQQVFTMDSAHLKGD*NGVMLTLSVKDGNNCVVYVATAITKKEDGPSYEYLLGNAKRNTEMGEWITRETTTCITDGHNGSDYALPKLVPLAESRRCVHHLLKNVPA-VGMVK---VFDAARHPTKSGFDSSMKQLHRL--KPEAHDKLTSI-PHEKWASYAARANVTWDQTMLN 648
            G+R++ SYC++L    PG+V  VE ++ GRF   FVMLG +AH AV SP +V  MD  HLKG+ NG+MLTL+ KD NN  ++VAT I  KED   Y+ LL N K+N +M + +    TT  TD H G+  AL    PLA+ R C+ HL+ N+   +G      VF AAR PTK   +  +KQ H L  KP A+ ++       +WA      +      + N
Sbjct:  142 GYRIMDSYCKELVKDCPGSVAVVERETTGRFRSVFVMLGRAAHAAVRSPIKVVGMDGGHLKGEWNGMMLTLTCKDANNENIHVATVIGPKEDTSLYKTLLRNCKKNLKMRDLLEDSKTTFFTDQHKGATCALRGEAPLAQHRYCLRHLILNLEEKIGSNANSWVFFAARAPTKKQCEDILKQ-HVLPSKPRAYVQIIDDWKRHEWAHSGGPPDTALQDVVTN 362          
BLAST of mRNA_H-elongata_contig52543.12560.1 vs. uniprot
Match: A0A6H5JUM0_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUM0_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 5.800e-36
Identity = 88/209 (42.11%), Postives = 122/209 (58.37%), Query Frame = 1
Query:    4 GFRVLGSYCEQLKISSPGTVCDVEWDSGGRFERCFVMLGLSAHVAVHSPQQVFTMDSAHLKGD*NGVMLTLSVKDGNNCVVYVATAITKKEDGPSYEYLLGNAKRNTEMGEWITRETTTCITDGHNGSDYALPKLVPLAESRRCVHHLLKNVPA-VGMVK---VFDAARHPTKSGFDSSMKQLHRL--KPEAHDKLTSIPHEKWASYAA 612
            G+R++ SYC++L    PG V  V+ ++ GRF   FVMLG +A  AV SP +V  MD  HLKG+ NG+MLTL+ KD +N ++ VAT I  KED   Y+ LL N K N +M + +    TT  TD H G+  AL +  PLA+ R C+ HL+ N+   +G      VF AAR PTK   +  +KQ H L  KP A+ ++      KW  +A+
Sbjct:  184 GYRIMDSYCKELVKDCPGPVAVVQRETTGRFPSVFVMLGRAARAAVRSPVKVVGMDGGHLKGEWNGMMLTLTCKDAHNEMINVATVIGPKEDTSLYKTLLRNCK-NPKMRDLLEDSKTTFFTDQHKGATCALRREAPLAQHRYCLRHLILNLEEKIGSNANSWVFFAARAPTKKQCEDILKQ-HVLPSKPRAYVQIIDDDW-KWHEWAS 389          
BLAST of mRNA_H-elongata_contig52543.12560.1 vs. uniprot
Match: A0A6H5L490_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L490_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.380e-33
Identity = 69/152 (45.39%), Postives = 93/152 (61.18%), Query Frame = 1
Query:    4 GFRVLGSYCEQLKISSPGTVCDVEWDSGGRFERCFVMLGLSAHVAVHSPQQVFTMDSAHLKGD*NGVMLTLSVKDGNNCVVYVATAITKKEDGPSYEYLLGNAKRNTEMGEWITRETTTCITDGHNGSDYALPKLVPLAESRRCVHHLLKNV 459
            G+R++ SYC++L    PG+V  VE ++ GRF   FVML  +AH AV SP +V  MD  HLKG+ NG+MLTL+ KD NN  ++VA  I  KED   Y  LL N K+N +M + +    TT  TD H  +  AL    PLA+ R C+ HL+ N+
Sbjct:  145 GYRIMDSYCKELVKDCPGSVAVVERETTGRFRSVFVMLRRAAHAAVRSPMKVVGMDGGHLKGEWNGMMLTLTCKDANNENIHVAAVIGPKEDTSLYNTLLRNCKKNPKMRDLLEDSKTTFFTDQHKEATCALRGEAPLAQHRHCLRHLILNI 296          
BLAST of mRNA_H-elongata_contig52543.12560.1 vs. uniprot
Match: A0A6H5JAG6_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG6_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 9.850e-26
Identity = 63/163 (38.65%), Postives = 93/163 (57.06%), Query Frame = 1
Query:    4 GFRVLGSYCEQLKISSPGTVCDVEWDSGGR----FERCFVMLGLSAHVAVHSPQQVFTMDSAHLKGD*NGVMLTLSVKDGNNCVVYVATAITKKEDGPSYEYLLGNAKRNTEMGEWITRETTTCITDGHNGSDYALPKLVPLAESRRCVHHLLKNVPAVGMVK 480
            G RV  S   +LK+++     + + + G R    F R  +MLG +A  AV SP +V   D  HLKG+ NG++LTL+ KD NN +++VAT I  KED   Y+ LL N K+N +M + +    T   TD H G+  AL    PLA+ R C+ H++ N+  +G V+
Sbjct:  116 GLRVSYSAASRLKVAATRASKE-QLEHGYRIMDSFRRVILMLGRAARAAVRSPMKVVGKDGGHLKGEWNGMVLTLTCKDANNEMIHVATVIGPKEDTSLYKTLLRNCKKNPKMRDLLEDSKTIFFTDQHKGATCALRGEAPLAQHRYCLRHIILNIEKIGSVQ 277          
BLAST of mRNA_H-elongata_contig52543.12560.1 vs. uniprot
Match: A0A6H5K734_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K734_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 2.700e-20
Identity = 47/100 (47.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:  157 VFTMDSAHLKGD*NGVMLTLSVKDGNNCVVYVATAITKKEDGPSYEYLLGNAKRNTEMGEWITRETTTCITDGHNGSDYALPKLVPLAESRRCVHHLLKN 456
            V  MD  HLKG+ NG+MLTL+ KD NN +++VAT I  KED   Y+ LL N K+N +M + +    TT  TD H G+  AL    PLA+ R C+ HL+ N
Sbjct:    9 VVGMDGGHLKGEWNGMMLTLTCKDANNEMIHVATVIGPKEDTSLYKTLLRNCKKNPKMRDLLEDSKTTFFTDQHKGATCALRGEAPLAQHRYCLRHLILN 108          
BLAST of mRNA_H-elongata_contig52543.12560.1 vs. uniprot
Match: A0A6H5K043_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K043_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 2.750e-18
Identity = 67/171 (39.18%), Postives = 88/171 (51.46%), Query Frame = 1
Query:  157 VFTMDSAHLKGD*NGVMLTLSVKDGNNCVVYVATAITKKEDGPSYEYLLGNAKRNTEMGEWITRETTTCITDGHNGSDYALPKLVPLAESRRCVHHLLKNVPA-VGMVK---VFDAARHPTKSGFDSSMKQLHRL--KPEAHDKLTSI-PHEKWASYAARANVTWDQTMLN 648
            V  MD  HLKG+ NGVMLTL+ KD NN   +VAT I  KED   ++ LL N K N +M + +    TT  TD H G+  AL    PLA+ R C+ HLL N+   +G      VF  AR  TK  F+  +KQ H L  KP A+ ++       +WA   A  +      + N
Sbjct:   10 VVGMDGGHLKGEWNGVMLTLTCKDANNENSHVATVIGPKEDTSLHKTLLRNWK-NPKMRDLLEDSKTTFFTDQHKGATCALRGEAPLAQHRYCLRHLLLNLEEEIGSNANSWVFFVARATTKKQFEDILKQ-HVLPSKPRAYVQIIDDWKRHEWAHSGAPPDTALQDVVTN 178          
BLAST of mRNA_H-elongata_contig52543.12560.1 vs. uniprot
Match: A0A6P5GH66_ANACO (uncharacterized protein LOC109721441 n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GH66_ANACO)

HSP 1 Score: 82.0 bits (201), Expect = 1.610e-14
Identity = 55/208 (26.44%), Postives = 95/208 (45.67%), Query Frame = 1
Query:    1 EGFRVLGSYCEQLKISSPGTVCDV-EWDSGGRFERCFVMLGLSAHVAVHSPQQVFTMDSAHLKGD*NGVMLTLSVKDGNNCVVYVATAITKKEDGPSYEYLLGNAKRNTEMGEWITRETTTCITDGHNGSDYALPKLVPLAESRRCVHHL-------LKNVPAVGMVKVFDAARHPTKSGFDSSMKQLHRLKPEAHDKLTSIPHEKWA 600
            EG+ +L S+CEQ+K+S+PG++  V    S  RF++ F+    S H  ++S   + ++ +  LK    G +L+++  D +  +  VA  I   E   S+ + L       E          T ++ G  G + A+ +  P A    C+ HL        KN   V ++  + AA   T  GF   M ++  + P+A  K+   P  +WA
Sbjct:  147 EGYCLLPSFCEQIKLSNPGSIAQVYTTGSDHRFQKLFISFNASIHGFINSCLPIISLGAMELKSKYLGTLLSITSFDADGGLFPVAFGIVDLETDESWLWFLSEFHNLLERSNETKIPKLTFLSSGEKGINEAVRRKFPTANHAICMRHLTDSINKEFKNSRLVQLL--WKAACSITTVGFRERMAEIEEVSPDAAKKIQLFPPNRWA 352          
BLAST of mRNA_H-elongata_contig52543.12560.1 vs. uniprot
Match: A0A6I9SAJ7_ELAGV (uncharacterized protein LOC105055884 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9SAJ7_ELAGV)

HSP 1 Score: 77.0 bits (188), Expect = 8.490e-13
Identity = 57/208 (27.40%), Postives = 95/208 (45.67%), Query Frame = 1
Query:    1 EGFRVLGSYCEQLKISSPGTVCDV-EWDSGGRFERCFVMLGLSAHVAVHSPQQVFTMDSAHLKGD*NGVMLTLSVKDGNNCVVYVATAITKKEDGPSYEYLLGNAKRNTEMGEWITRETTTCITDGHNGSDYALPKLVPLAESRRCVHHL-------LKNVPAVGMVKVFDAARHPTKSGFDSSMKQLHRLKPEAHDKLTSIPHEKWA 600
            EG+ +L +YCEQ+K+S+PG++  V    S  RF+R FV    S +  +H    +  +    LK    G +L+++  D +  +  VA  I   E   S+ + L    +  E+    T    T ++DG  G   A+ +  P A    C+ HL        KN   V ++  + AA   T  GF   M ++  +  EA  ++  +P  +WA
Sbjct:  147 EGYCLLPAYCEQIKLSNPGSIAQVFTTGSDHRFQRLFVSFNASINGFLHGCLPIIGLGGMELKSKYLGTLLSVTSFDADGGLFPVAFGIVDVETEESWMWFLSEFHKLLEIST-ETIPQLTVLSDGQKGIVEAVRRKFPTAYQGICMRHLTESINKEFKNGRLVQLL--WKAAYSITTIGFRERMAEIEEVCAEAAKRIQQVPPNRWA 351          
BLAST of mRNA_H-elongata_contig52543.12560.1 vs. uniprot
Match: A0A6P6X0F7_COFAR (uncharacterized protein LOC113737376 n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6X0F7_COFAR)

HSP 1 Score: 74.3 bits (181), Expect = 7.770e-12
Identity = 58/210 (27.62%), Postives = 94/210 (44.76%), Query Frame = 1
Query:    7 FRVLGSYCEQLKISSPGTVCDVEWDSGGR-----FERCFVMLGLSAHVAVHSPQQVFTMDSAHLKGD*NGVMLTLSVKDGNNCVVYVATAITKKEDGPSYEYLLGNAKRNTEMGEWITRETTTCITDGHNGSDYALPKLVPLAESRRCVHHLLKNVPAVGMVK-----VFDAARHPTKSGFDSSMKQLHRLKPEAHDKLTSIPHEKWASY 606
            +  L  YC  L   +PG+V  +  +         F+R FVM        V++ + V  +D+ HLKG   G +++   +D NN +  +A A+ + E   S+ + L +      +G  I R     ++D   G    +    P  E R CV H+  N       K     ++ AAR      ++S M++LH + PEAH  L+SIP   WA +
Sbjct:  320 YARLRDYCATLLQRNPGSVAFIVTEKSNICKSPIFKRMFVMFTAQKEGFVNACRPVIGLDACHLKGIMGGQLMSAIGRDANNQMFPIAMALVESECKDSWGWFLDSL--TDAIGTPIERGWVF-LSDRQKGLIDCIENKYPGVEHRFCVRHMYANFKLKFKDKHLRDLMWGAARAYLPCHYESKMRELHLVAPEAHAWLSSIPANLWARH 526          
BLAST of mRNA_H-elongata_contig52543.12560.1 vs. uniprot
Match: A0A6P6WVB7_COFAR (uncharacterized protein LOC113736519 n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6WVB7_COFAR)

HSP 1 Score: 74.3 bits (181), Expect = 7.800e-12
Identity = 58/210 (27.62%), Postives = 94/210 (44.76%), Query Frame = 1
Query:    7 FRVLGSYCEQLKISSPGTVCDVEWDSGGR-----FERCFVMLGLSAHVAVHSPQQVFTMDSAHLKGD*NGVMLTLSVKDGNNCVVYVATAITKKEDGPSYEYLLGNAKRNTEMGEWITRETTTCITDGHNGSDYALPKLVPLAESRRCVHHLLKNVPAVGMVK-----VFDAARHPTKSGFDSSMKQLHRLKPEAHDKLTSIPHEKWASY 606
            +  L  YC  L   +PG+V  +  +         F+R FVM        V++ + V  +D+ HLKG   G +++   +D NN +  +A A+ + E   S+ + L +      +G  I R     ++D   G    +    P  E R CV H+  N       K     ++ AAR      ++S M++LH + PEAH  L+SIP   WA +
Sbjct:  161 YARLRDYCATLLQRNPGSVAFIVTEKSNICKSPIFKRMFVMFTAQKEGFVNACRPVIGLDACHLKGIMGGQLMSAIGRDANNQMFPIAMALVESECKDSWGWFLDSL--TDAIGTPIERGWVF-LSDRQKGLIDCIENKYPGVEHRFCVRHMYANFKLKFKDKHLRDLMWGAARAYLPCHYESKMRELHLVAPEAHAWLSSIPTNLWARH 367          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52543.12560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5LCT1_9PHAE1.060e-3940.99MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JUM0_9PHAE5.800e-3642.11MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L490_9PHAE1.380e-3345.39MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JAG6_9PHAE9.850e-2638.65MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K734_9PHAE2.700e-2047.00MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K043_9PHAE2.750e-1839.18MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6P5GH66_ANACO1.610e-1426.44uncharacterized protein LOC109721441 n=1 Tax=Anana... [more]
A0A6I9SAJ7_ELAGV8.490e-1327.40uncharacterized protein LOC105055884 n=2 Tax=Areca... [more]
A0A6P6X0F7_COFAR7.770e-1227.62uncharacterized protein LOC113737376 n=1 Tax=Coffe... [more]
A0A6P6WVB7_COFAR7.800e-1227.62uncharacterized protein LOC113736519 n=1 Tax=Coffe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52543contigH-elongata_contig52543:25..2712 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size648
Cds size444
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52543.12560.1prot_H-elongata_contig52543.12560.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig52543 25..1105 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930858.5053663-CDS-H-elongata_contig52543:24..2071622930858.5053663-CDS-H-elongata_contig52543:24..207Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52543 25..207 -
1691679600.5096512-CDS-H-elongata_contig52543:24..2071691679600.5096512-CDS-H-elongata_contig52543:24..207Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52543 25..207 -
1622930858.521432-CDS-H-elongata_contig52543:844..11051622930858.521432-CDS-H-elongata_contig52543:844..1105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52543 845..1105 -
1691679600.523338-CDS-H-elongata_contig52543:844..11051691679600.523338-CDS-H-elongata_contig52543:844..1105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52543 845..1105 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930858.5354738-UTR-H-elongata_contig52543:1105..11531622930858.5354738-UTR-H-elongata_contig52543:1105..1153Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52543 1106..1153 -
1691679600.5360045-UTR-H-elongata_contig52543:1105..11531691679600.5360045-UTR-H-elongata_contig52543:1105..1153Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52543 1106..1153 -
1622930858.5556283-UTR-H-elongata_contig52543:1648..17291622930858.5556283-UTR-H-elongata_contig52543:1648..1729Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52543 1649..1729 -
1691679600.550834-UTR-H-elongata_contig52543:1648..17291691679600.550834-UTR-H-elongata_contig52543:1648..1729Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52543 1649..1729 -
1622930858.5740511-UTR-H-elongata_contig52543:2637..27121622930858.5740511-UTR-H-elongata_contig52543:2637..2712Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52543 2638..2712 -
1691679600.5632932-UTR-H-elongata_contig52543:2637..27121691679600.5632932-UTR-H-elongata_contig52543:2637..2712Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52543 2638..2712 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig52543.12560.1

>prot_H-elongata_contig52543.12560.1 ID=prot_H-elongata_contig52543.12560.1|Name=mRNA_H-elongata_contig52543.12560.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=148bp
MLTLSVKDGNNCVVYVATAITKKEDGPSYEYLLGNAKRNTEMGEWITRET
TTCITDGHNGSDYALPKLVPLAESRRCVHHLLKNVPAVGMVKVFDAARHP
TKSGFDSSMKQLHRLKPEAHDKLTSIPHEKWASYAARANVTWDQTMLN
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mRNA from alignment at H-elongata_contig52543:25..2712-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig52543.12560.1 ID=mRNA_H-elongata_contig52543.12560.1|Name=mRNA_H-elongata_contig52543.12560.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2688bp|location=Sequence derived from alignment at H-elongata_contig52543:25..2712- (Himanthalia elongata Himel1 dioecious)
GAGGGCTTTCGTGTACTGGGAAGCTACTGCGAACAGCTAAAAATAAGCAG CCCAGGAACTGTCTGTGATGTTGAGGTGAGGCTCATATGAGGGGTTTATC TCTGTTTTCGGAACCTTTTTGAATTTTGAACACTTCAGCTTTTAGGAGAT CCTTGCACGTGCGCCTAAGTTGCGATTGCTACGTAGAATGTGTTGAGGCC GCAGACAGGCAGAGTGCCTGCAGCCCGACGAGAGAGGGACATTACTCCGC ACGTCGTGATTGGGTCTACGCGATATATATGCCATACTGCTGCAGAAGAG GCAAAAAAACGTTTGCGTATTTCGCCGTTGGTTCGATGTTGCCCAAATTT CAAATTTCGGATTTTGTGGGCCAAGATGAATGAACACGGTCCTTCTGATG GGACAGGATTGCTGTACGCATGGGTTCCCTGACTCGGAGTACAGATAGGT TCAGATCATTCCGATTCTAGTTCGCTCGCAAACTCTGTTCGACCTTTTCG CTATCAATCTCCGTTTTAGAAATTCATGAAATTGAATCGTGCTATGTCGC ATCATATCACACGAGTAGGGGGTATGAGTCTCTCTGATTCGTAACAAACT ACTGTATAAACGACGATACACGATAGGGTTCGATTCCGCACGGTACGTTT TTGTCCATTGTAGTAGTAAGCACAGTACTGGTGTTGCTGGATTAATACTT CGATTGCACCGAATTTTAGTATCTCGTTCGAACGAGCGCTGATTAAAATC CGATTGAACTGATCATCGACATTTTCGTGTGCTTCGACGTTGCCGGTGTA AGCGAACGTCTTGAGTGTGCAACACCCGGACACATTTCGCAGGTAGTGCA GCAGTGTCTTCTCGATGTTCAGTGGCATTCGGCAGATGCCCAGAAACGTT TTGATTACCTTCCACATCGCGGACTGATTTAACACAAGTGCATCCTCCCT GGAATCCTTTGTTACTTTTGGAATTAAATGCAGTGGGATTCAGGCGGACG GTTTGAGAGATGCTTCGTCATGCTCGGTCTATCCGCTCACGTCGCAGTCC ACAGCCCGCAGCAGGTTTGCCAATTTTGGGTTGTGTTGAGAGCATCATGT CCTCTTTCCCGTCGTTGCCTCACTGTTAAGGGGATTGCTATACTGTGCTT CTCTTTTGAGTACGAGCCATAACTGTTTCGCGCTCGCAAGATATCATGCA AGCGAATTAGCTCTTTTAACCCCTATTTAGCCTCGATCTGTTTTTTACAC ACTAAATTCAGTATAAAACTTGAAATCCAGTCCCGAAAGGGTTAATTTGC GAATGTACTGGCATCTGAAAAGCAACAAAACTGCTTTTGAAGTATCGTTC CCAACCAGTGTTTTGGCATGAGGTAGGCCTTCTTGTTCATCTGCTTTCGT GCGTGCATTTCAGCATTAAATTGCTCGCAATGCAACGGGGGTCGTTTTTG TCTTGAGAAAACGGACTGCACCTACCAACTTGCAACTGATGCTGCCACAT ATTTTCCGTCTCAAGATGTCTTATCCACTACTCGACCTTGCTTTTTCTGA ATGGGGCAGGTATTCACCATGGATTCTGCACATCTCAAGGGTGACTGAAA TGGCGTTATGTTGACGTTATCAGTGAAAGACGGCAACAACTGTGTCGTCT ATGTGGCAACAGCCATTACCAAGAAAGAAGACGGTCCTTCGTACGAATAT TTGCTGGGGAATGCGAAGAGGAATACAGAAATGGGGGAATGGATTACCCG TGAGACCACCACGTGCATCACAGACGGGCACAATGGATCGGACTATGCCC TTCCGAAGCTGGTTCCACTCGCGGAGTCCCGACGGTGTGTTCATCATCTA CTGAAGAACGTACCTGCCGTCGGATCGATGAGCTAATAGAAATTCGTGGC GAAACACACGTAGGTGCAATGTGTTCCTTGTGCTGGAAGAATGCAATTAA CTGTGATTGTTCACGGTGTTATAGAAATAAAAGACTGGTTAGATTGTGTT GTGTTGGTGAACTTTTTTTCTCTGAAGGCAACGAAATCCGGTTGATCTCC TGCCAAATGTCTGACCAACAACTAACAGCTACTAAATAGTCAGACCCGAG ACCCCGATTCAGCTGCAGCATGTTCATTTGTACTGGCATGACGCGGTGAC TCAAGTGTTGTAATTGCGGGACATGGATCCGCAGTCTATGATCGTGACTT CATCACTGCGGATGTGAAAGCCACCGATAGACTAGTGTATTGATCGTCTC CTCAGTCTTCTGATGCCGTTTCCATTACTCAGAGAGATGCTCTTGGAAAA CGTGAGAATGCATGCGTTTTGTGCGGTTTAGGTTTGTAGCTTGGAAGTAC CTACTGATGATACTGGACTTCATGGCCTTAGAAAAAATGATAAATTTCTG TAATAGCAACGTGGTCATGAATTACTGTACCACTTGACTATTGAATTACA GTACATCTCTCCCGATTGTCATCGACGTGCCGTTTCTGTGGGTACCTTTT CCTAGGTGGGCATGGTGAAAGTCTTCGATGCAGCTAGACACCCGACCAAA TCCGGCTTTGACTCTTCGATGAAACAGCTTCACCGTCTCAAGCCGGAGGC CCACGACAAGCTGACGAGCATCCCACACGAAAAATGGGCGAGCTACGCAG CACGAGCGAACGTTACTTGGGACCAAACAATGTTGAAC
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Coding sequence (CDS) from alignment at H-elongata_contig52543:25..2712-

>mRNA_H-elongata_contig52543.12560.1 ID=mRNA_H-elongata_contig52543.12560.1|Name=mRNA_H-elongata_contig52543.12560.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=888bp|location=Sequence derived from alignment at H-elongata_contig52543:25..2712- (Himanthalia elongata Himel1 dioecious)
ATGTTGACGTTATCAGTGAAAGACGGCAACAACTGTGTCGTCTATGTGGC
AACAGCCATTACCAAGAAAGAAGACGGTCCTTCGTACGAATATTTGCTGG
GGAATGCGAAGAGGAATACAGAAATGGGGGAATGGATTACCCGTGAGACC
ACCACGTGCATCACAGACGGGCACAATGGATCGGACTATGCCCTTCCGAA
GCTGGTTCCACTCGCGGAGTCCCGACGGTGTGTTCATCATCTACTGAAGA
ACGTACCTGCCATGTTGACGTTATCAGTGAAAGACGGCAACAACTGTGTC
GTCTATGTGGCAACAGCCATTACCAAGAAAGAAGACGGTCCTTCGTACGA
ATATTTGCTGGGGAATGCGAAGAGGAATACAGAAATGGGGGAATGGATTA
CCCGTGAGACCACCACGTGCATCACAGACGGGCACAATGGATCGGACTAT
GCCCTTCCGAAGCTGGTTCCACTCGCGGAGTCCCGACGGTGTGTTCATCA
TCTACTGAAGAACGTACCTGCCGTGGGCATGGTGAAAGTCTTCGATGCAG
CTAGACACCCGACCAAATCCGGCTTTGACTCTTCGATGAAACAGCTTCAC
CGTCTCAAGCCGGAGGCCCACGACAAGCTGACGAGCATCCCACACGAAAA
ATGGGCGAGCTACGCAGCACGAGCGAACGTTACTTGGGACCAAACAATGT
TGAACGTGGGCATGGTGAAAGTCTTCGATGCAGCTAGACACCCGACCAAA
TCCGGCTTTGACTCTTCGATGAAACAGCTTCACCGTCTCAAGCCGGAGGC
CCACGACAAGCTGACGAGCATCCCACACGAAAAATGGGCGAGCTACGCAG
CACGAGCGAACGTTACTTGGGACCAAACAATGTTGAAC
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