mRNA_H-elongata_contig5252.12557.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5252.12557.1
Unique NamemRNA_H-elongata_contig5252.12557.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: D8LTL7_ECTSI (Heavy metal translocating P-type ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL7_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 1.250e-37
Identity = 101/168 (60.12%), Postives = 116/168 (69.05%), Query Frame = 1 
Query:    1 LHLSRAVFTRIRMNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRPGEPTVTQSMSARCRTRLGLNRQPPAPKKG-----------HEIGSSWLNRSNWLELKGSS-WKARA-RRGVGVGAGNWKKKGGLGEASPLLGGVQFEV 465
            LHLSRAVF RIRMNFVWALSYN+VALPLA G+LKPWLG+ +TPALAA+FMASSS+LVV+SSLGLKLYTRPGE    +S+   CR RLGL R PP P+ G            +   SWL +  WLEL     W+ R  RR VG G G   K+   GEASPLLG  QF+V
Sbjct: 1237 LHLSRAVFRRIRMNFVWALSYNVVALPLAAGLLKPWLGLGVTPALAALFMASSSSLVVLSSLGLKLYTRPGEVAPRESVVRSCRRRLGL-RTPPPPRHGGTSWNNPRVYDRQRRRSWLGKEFWLELGSRRPWRTREKRRDVGGGWGG-SKRFQAGEASPLLGPGQFQV 1402
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BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A836CM51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM51_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.190e-14
Identity = 52/83 (62.65%), Postives = 57/83 (68.67%), Query Frame = 1 
Query:    1 LHLSRAVFTRIRMNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRPGEPTVTQSMSARC 249
            L LSRAV  RIR+NF WAL YN  ALPLA G L P LG+SLTP LAA FMASSS LVV+SSL L LY  PG      + +A C
Sbjct: 1180 LDLSRAVLARIRLNFAWALGYNAAALPLAAGALLPPLGLSLTPPLAAAFMASSSMLVVLSSLALNLYRPPGHDPSCAADAAWC 1262
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BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A0A9CDC4_ARUDO (Heavy metal ATPase n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9CDC4_ARUDO)

HSP 1 Score: 73.2 bits (178), Expect = 1.530e-11
Identity = 44/100 (44.00%), Postives = 58/100 (58.00%), Query Frame = 1 
Query:    7 LSRAVFTRIRMNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRPGEPTVTQSMSARCRTRLGLNRQPPAPKKGHEI 306
            LSR    RIR+N+VWAL YN++ +P+A GVL P+ G+ L P LA   MA+SS  VV SSL L+LY +P                L +   PPAPK G ++
Sbjct:   57 LSRKTLARIRLNYVWALGYNILGMPVAAGVLFPFTGIRLPPWLAGACMAASSVSVVCSSLLLQLYKKP----------------LHVEDAPPAPKDGSDL 140
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BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A7S1DAN6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DAN6_CYCTE)

HSP 1 Score: 77.8 bits (190), Expect = 1.590e-11
Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 1 
Query:    1 LHLSRAVFTRIRMNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRP 210
            LHLSR VF RIRMNFVWA+ YN++ALP A GV  PW+   L P  A + MA SS  VV SSL L+ Y RP
Sbjct:  225 LHLSRVVFQRIRMNFVWAMGYNMLALPFAAGVFYPWINWRLPPEFAGLMMAFSSVSVVTSSLLLRAYHRP 294
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BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A5C3DNW4_9BASI (Probable CCC2 - P-type ATPase, Cu(2+)-transporting ATPase n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3DNW4_9BASI)

HSP 1 Score: 78.2 bits (191), Expect = 5.910e-11
Identity = 42/78 (53.85%), Postives = 54/78 (69.23%), Query Frame = 1 
Query:    1 LHLSRAVFTRIRMNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRPGEPTVTQS 234
            +HLSR +F +I++NF+WA  YNL+ +PLA+G+  PW G+SL P +A   MA SS  VV SSL LK Y RP E T T S
Sbjct:  921 IHLSRRIFRQIKLNFIWATIYNLIGIPLAMGIFLPW-GLSLHPMMAGAAMAFSSVSVVASSLTLKWYKRPAELTSTSS 997
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BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A7R9VJ71_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VJ71_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 6.200e-11
Identity = 40/70 (57.14%), Postives = 48/70 (68.57%), Query Frame = 1 
Query:    1 LHLSRAVFTRIRMNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRP 210
            LHLSR VF RIR+NFVWA++YN+ A+P A G L P+    L PA A + MA SS  VV SSL L+ Y RP
Sbjct:   34 LHLSRVVFRRIRLNFVWAMAYNVFAIPFAAGALYPFTDWRLPPAFAGLMMAFSSVSVVTSSLLLRTYDRP 103
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BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A7S1UWH6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWH6_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 6.390e-11
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 1 
Query:    1 LHLSRAVFTRIRMNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRP 210
            LHLSR VF RIR+NFVWA++YNL ALP A G+L P L +SL P  A++ MA SS  VV SSL L++Y RP
Sbjct:  637 LHLSRVVFHRIRLNFVWAMAYNLFALPFAAGLLYPILNLSLPPEYASLMMAFSSVSVVTSSLLLRMYVRP 706
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BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A1C7LPJ9_GRIFR (Uncharacterized protein n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7LPJ9_GRIFR)

HSP 1 Score: 71.6 bits (174), Expect = 8.240e-11
Identity = 44/91 (48.35%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:    1 LHLSRAVFTRIRMNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRPGEPT--VTQSMSARCRTRLGL 267
            LHLSRA+F+ I+ N VWA  YN + +PLA+GV  P LGV L P +A   MA SS  VV SSL LK + RPG+ +    +S + RC    G+
Sbjct:   70 LHLSRAIFSTIKRNLVWACIYNFLGIPLAMGVFLP-LGVHLHPMMAGAAMAFSSVSVVTSSLALKWWVRPGQASCPARRSYTRRCWIACGI 159
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BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A7S2RRQ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRQ9_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.640e-10
Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 1 
Query:    1 LHLSRAVFTRIRMNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRP 210
            L LSR VF RI++NF WA++YNLV +P+A G+L PWL + L PA A + MA SS  VV SSL LKLYT P
Sbjct:  789 LDLSRTVFRRIKINFFWAIAYNLVLIPVAAGLLVPWLNLRLHPAAAGLAMALSSVSVVASSLTLKLYTPP 858
[Close]
BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A5C3EUL2_9BASI (Probable CCC2 - P-type ATPase, Cu(2+)-transporting ATPase n=1 Tax=Pseudozyma flocculosa TaxID=84751 RepID=A0A5C3EUL2_9BASI)

HSP 1 Score: 76.6 bits (187), Expect = 1.820e-10
Identity = 43/75 (57.33%), Postives = 53/75 (70.67%), Query Frame = 1 
Query:    1 LHLSRAVFTRIRMNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRPGEPTV 225
            +HLSR +F +IR+NF+WA  YNLV +PLA+GV  PW G SL P +AA  MA SS  VV+SSL LK + RP E  V
Sbjct:  991 IHLSRRIFAQIRLNFLWATMYNLVGIPLAMGVFLPW-GYSLPPMMAAAAMAFSSVSVVLSSLTLKFWRRPRELAV 1064
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTL7_ECTSI1.250e-3760.12Heavy metal translocating P-type ATPase n=2 Tax=Ec... [more]
A0A836CM51_9STRA4.190e-1462.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0A9CDC4_ARUDO1.530e-1144.00Heavy metal ATPase n=1 Tax=Arundo donax TaxID=3570... [more]
A0A7S1DAN6_CYCTE1.590e-1160.00Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A5C3DNW4_9BASI5.910e-1153.85Probable CCC2 - P-type ATPase, Cu(2+)-transporting... [more]
A0A7R9VJ71_9STRA6.200e-1157.14Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1UWH6_9STRA6.390e-1161.43Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A1C7LPJ9_GRIFR8.240e-1148.35Uncharacterized protein n=1 Tax=Grifola frondosa T... [more]
A0A7S2RRQ9_9STRA1.640e-1060.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A5C3EUL2_9BASI1.820e-1057.33Probable CCC2 - P-type ATPase, Cu(2+)-transporting... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5252contigH-elongata_contig5252:2725..6561 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score149.4
Seed ortholog evalue1.2e-33
Seed eggNOG ortholog2880.D8LTL7
KEGG rclassRC00002
KEGG koko:K17686
KEGG TC3.A.3.5
KEGG ReactionR00086
KEGG Pathwayko01524,ko04016,map01524,map04016
EggNOG free text desc.cation-transporting ATPase activity
EggNOG OGsCOG2217@1,KOG0207@2759
EC3.6.3.54
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categorysignal peptide
Exons3
Model size2708
Cds size432
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5252.12557.1prot_H-elongata_contig5252.12557.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5252 2761..4321 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930857.935575-UTR-H-elongata_contig5252:2724..27601622930857.935575-UTR-H-elongata_contig5252:2724..2760Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5252 2725..2760 +
1691679600.1864464-UTR-H-elongata_contig5252:2724..27601691679600.1864464-UTR-H-elongata_contig5252:2724..2760Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5252 2725..2760 +
1622930858.00676-UTR-H-elongata_contig5252:4321..65611622930858.00676-UTR-H-elongata_contig5252:4321..6561Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5252 4322..6561 +
1691679600.2394798-UTR-H-elongata_contig5252:4321..65611691679600.2394798-UTR-H-elongata_contig5252:4321..6561Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5252 4322..6561 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930857.9529536-CDS-H-elongata_contig5252:2760..27831622930857.9529536-CDS-H-elongata_contig5252:2760..2783Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5252 2761..2783 +
1691679600.2039728-CDS-H-elongata_contig5252:2760..27831691679600.2039728-CDS-H-elongata_contig5252:2760..2783Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5252 2761..2783 +
1622930857.9679146-CDS-H-elongata_contig5252:3396..35741622930857.9679146-CDS-H-elongata_contig5252:3396..3574Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5252 3397..3574 +
1691679600.2175777-CDS-H-elongata_contig5252:3396..35741691679600.2175777-CDS-H-elongata_contig5252:3396..3574Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5252 3397..3574 +
1622930857.9873567-CDS-H-elongata_contig5252:4090..43211622930857.9873567-CDS-H-elongata_contig5252:4090..4321Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5252 4091..4321 +
1691679600.2267587-CDS-H-elongata_contig5252:4090..43211691679600.2267587-CDS-H-elongata_contig5252:4090..4321Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5252 4091..4321 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5252.12557.1

>prot_H-elongata_contig5252.12557.1 ID=prot_H-elongata_contig5252.12557.1|Name=mRNA_H-elongata_contig5252.12557.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp
MNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSL
GLKLYTRPGEPTVTQSMSARCRTRLGLNRQPPAPKKGHEIGSSWLNRSNW
LELKGSSWKARARRGVGVGAGNWKKKGGLGEASPLLGGVQFEV*
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mRNA from alignment at H-elongata_contig5252:2725..6561+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5252.12557.1 ID=mRNA_H-elongata_contig5252.12557.1|Name=mRNA_H-elongata_contig5252.12557.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3837bp|location=Sequence derived from alignment at H-elongata_contig5252:2725..6561+ (Himanthalia elongata Himel1 dioecious)
TTACACCTTAGCCGAGCCGTATTTACGCGCATCAGGATGAACTTCGTTTG
GGCCCTCAGGTGACCTGTGTGTGTGTGTGTGTGTGTGTTGGGAAATGTGA
CGGGAGATGTGATGGCTTGACCAAGATCCATCATTCTCTCTTGTGGTATT
TTTTCCTTCTGGAGGCTCACTTCGTTCGGGCGGCCTGATTATCTATCATC
CTGTGCGTAGAGGACGCGATTGCTGTGGTTTGGGAGCTTGACGAACCTCG
GGGCCAATATTGTTTTTATAATGAAACATGGCCACGAGATTGAGGGAGGG
CGGCAGGTGGCGTACTGCCGTTTATTATCAGGGGGGAGATATAGAGTAGC
ACGTTCCCTCGTTCTTAACGTGTTTCTCGACATCAGAGGCCTTGCCGCTC
GACCGAACCAACCAGTCGAGCATGCAAGCTCAGATCTTAAGGTTTGAGGC
GTTACGCGCTCGCTTGCGCATTTAAGAGAAATGTGTGTTATGTGTTTAAC
GTTCTCCAATGGTGCTGATGTTTTTTTCGGTCGGTGGCTTGTTAAACATC
TACATAGCACTCGCTGAAACCTGGGTGTCCGGACTATCTTTAGACCCCCA
TCCTCCCCCCCATCTCGCATGTGTCACCACGCTTGACGACTCCCACCTCC
CTCTCATAACGATCTCCCGCAGCTACAACTTGGTGGCGTTACCGTTGGCC
GTCGGGGTCTTGAAACCTTGGCTTGGGGTGTCGCTGACGCCGGCCCTTGC
CGCGGTATTCATGGCGTCGTCGTCGACCCTCGTGGTGGTGAGCAGCCTCG
GGCTCAAGCTGTACACAAGACCAGGAGAGCCTACGGTCACGCAGTCCATG
GTGAGCACGAAAGCAAGATGTAAGGCACGAAGTGGAGGGCGGGGGGGGGG
CATTACTTAAAACACCCGTTGCACCGTGCTAGCCAGGTCGTGAGTCGTCG
AGGACCAAACGATGCGCGTGGTGCAGGCATAAGCACAAACACAGGATCAA
TCTTGGACACGCGCGATGTGATGTTATGACATTGGGAAGGTCGTTCAATA
TGCCGTAAGAATGATATCGCGATTACGGGGCGAGACCACTTCTGATTTAT
TATTATTATTTTTGATTGAATTATCACCTAAGCTGATTATGTCAAAATCC
AGCCCGTGGTCACAAGGTAGAAAACGGCAATGGTGCATAGCGACAACGAA
ACGCCTCGCCCGTTCATGATGCGGAATCGATCAATACCCATTGTGATCAA
GGTCTCCACAGCGCGCACACTTTCTCCTTCCCCCTTCACATTTCCTGCCC
TTCTTGTCGTTTTATCCTCGTTCCGTTGTTGTAATGTTCTCCCTCCATTA
CCCGGTGCGAACACAGTCGGCACGCTGCCGCACGAGGTTGGGCTTGAACC
GCCAGCCTCCCGCTCCAAAAAAGGGTCACGAAATCGGGTCATCATGGCTG
AACCGGTCGAACTGGCTTGAGTTGAAAGGTAGCTCTTGGAAGGCTAGGGC
GAGGAGGGGTGTAGGTGTAGGGGCAGGGAACTGGAAGAAAAAGGGAGGAC
TGGGAGAGGCGTCTCCGTTGCTTGGCGGCGTTCAGTTCGAGGTCTAGAGC
TTAGTGCTGGCGTAGCCTACGTCATCGGTGGTACGTAAGAAGGGGGGAAA
TATTTGCTGCGGTGTTTTTGTCCAATTGTTCTTTTGTCCTTTTTTGCTAG
TGTTGCTAATTGGAGTTAGTGTAGTACACGTGCGAAGTGCAGTCGTCAAG
TCGTCAAGTGTGTCGGGGAAGCTTCGCTTCGAGCGTATCCCACGCGGTCG
GTAAAAGAGAAGCGCGTCGTGACGCGTTGACATCGACCGACCGGCTCTCA
GCGAAGTACCAGGTATCACGTTTGAGTGCGTAAAGCCCCTCTCGTGAACA
GGCTTGTGTGCAAGCTCGATCCCTGCCCCGAGAGAAACTGCTCGTGCGGG
TGCGGCGGGTCGTATAGACACACAAGAAACGAATTGCTATCGTTGTCGTC
ATCGTTGTAGTGATCGTTATCGTAATCGTTGTGGTCATCTTCATCGCCAC
CCAAGGAGAAGCTTACACGAACCATCCCGGGACTTGATGGGAAACGTGGC
GGTAGCTCATCTCTTCCGCATCTCGGAAATCACGAACCTGAACCCGATGG
TTGACCTCTGCGGGGTTCAGTATGCATCTCCTTGCTTTGCTTGTAGGGGT
CTTGACGGTATATTTTTTGCGCAAAGCTTTTTGAGATCGGCAGGAGAAGT
TTCCACGGTACCCCCAGGCGTCGCCTTAGCTCAAATGTCCCCAAGAGAAG
TACTTCATCGCTCGATTCGCGGAGACATTCTCGCCGCGGCAGAGGCGTGT
TTGGCGTGCGCACGTTTTCGAAAATTTCCACGAAGATAGACGGAAGAAAA
TTGGACTGGACTGTCTCTCCCGTTCGGACGAGATCTAGAACAATCCTCTG
CCATCCCTTTCCCCTGAAGGTGTCGTGGATGTCCACACGTGGCAACACAT
GACGCACCCGCAAGAGGCTATGGTGGAACAGAGAGGGACAGCGAGGGGTC
TAGCTTTGGAGGATGCGAGTAAATGCGGAGGATATGTTGAAACTTGAATC
CTTCTTGCGAAGCATCTTGCGCTGTTTATCTCTGCACCTTGCGCCGTCTT
GGCTGTAGAAATGCCGGCCCATGAATGTGTTTTTTTTTTGCTGCTGTTGC
GCCCTTTTGTGTCGGCACCGAATGTAGCAATTGTAATAATAGAATATAAA
AATATCTAAATGGAGCCATCATAACAGTGTAATATATTTTTGTTTATTTT
CCCTGTTCAGCTGACCACGAACAAAAGGCAACCAAATCCGGTTGATCTTA
CTCTGCTAAATGTGTGACCAAAAACATATATGGAGCCATTGTGATAGTAG
TATAACATCTATGGTGGCCATCTTTTATGGGATCGGATTTGGATCTAGAA
TATGATTGGATCCCAGATGCTTTTCGCTGATACATACTATGTCCACATTC
GAACCTGACGATAGTTGGTCCCCTGGAATGCACCTCTCATGATACTAAGA
AGGCGTGGATGTTCGAAGGGTTCTAATGAGTTCACATATTTTAAAATTAA
AGTTTGGAGTCCAAATCCAATTTATGGATTTAAAAAAAAGGAAGGTTTGC
AATGATTTTGACAGCGTGTGTGCTTTGTACTAGCCCTCTTTTTCCCATAA
TATATACGGTAATCTTTAAACACAGCAAGGTGTCGCATGAGAGATGGACA
ATGTAATATCTCGGCGTACTGTGCATAGGGCACTGATCTGAAAATTTGTT
GCCAACGACCACCTAGTTTTGTCGGTCGGTAAGGCAGGACACTAGTTTTT
TTTAGGTCACAGGTACGACACATGAGACGGATTATGATACTACGGATGGA
GGCAGTTGGTGGTGGAGGATTAGATGGGAAGATGAATGGCCACGCTCCTC
TGGGATCAAGACAAATGTATGGCTCAGCGGAGCCGAAATTGGCTTCAAAC
ATTATACTCACGTCGATGTATCATGAATCGACCCAGTTTGATGAGCGATT
AAGGGTGCTGCACAAGTTTTTCTAGCTTGTGGTGTGTCGAAGTAGAAGTC
TCCCAAGAGTCGTAGGTTGTTTTTTGGTCTTATATTATTATTCGAGCACA
GGTTGAGCGCGCGGAAGCGTGGGATCACGATGTGTTGGGACACCGGGTGG
GGGCTCAACAGCAAAGGGTTACGGTCCTTACCCAAAGAAAAGAAGTTCCA
CAAATGAGACCACCTCTACGGGCTATACCCACGAAACGGTTCACGGTCCC
AACCGTAACACCCCCCCCAGTATATTATGAATAACAG
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Coding sequence (CDS) from alignment at H-elongata_contig5252:2725..6561+

>mRNA_H-elongata_contig5252.12557.1 ID=mRNA_H-elongata_contig5252.12557.1|Name=mRNA_H-elongata_contig5252.12557.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=864bp|location=Sequence derived from alignment at H-elongata_contig5252:2725..6561+ (Himanthalia elongata Himel1 dioecious)
ATGAACTTCGTTTGGGCCCTCAGATGAACTTCGTTTGGGCCCTCAGCTAC
AACTTGGTGGCGTTACCGTTGGCCGTCGGGGTCTTGAAACCTTGGCTTGG
GGTGTCGCTGACGCCGGCCCTTGCCGCGGTATTCATGGCGTCGTCGTCGA
CCCTCGTGGTGGTGAGCAGCCTCGGGCTCAAGCTGTACACAAGACCAGGA
GAGCCTACGGTCACGCAGTCCATGCTACAACTTGGTGGCGTTACCGTTGG
CCGTCGGGGTCTTGAAACCTTGGCTTGGGGTGTCGCTGACGCCGGCCCTT
GCCGCGGTATTCATGGCGTCGTCGTCGACCCTCGTGGTGGTGAGCAGCCT
CGGGCTCAAGCTGTACACAAGACCAGGAGAGCCTACGGTCACGCAGTCCA
TGTCGGCACGCTGCCGCACGAGGTTGGGCTTGAACCGCCAGCCTCCCGCT
CCAAAAAAGGGTCACGAAATCGGGTCATCATGGCTGAACCGGTCGAACTG
GCTTGAGTTGAAAGGTAGCTCTTGGAAGGCTAGGGCGAGGAGGGGTGTAG
GTGTAGGGGCAGGGAACTGGAAGAAAAAGGGAGGACTGGGAGAGGCGTCT
CCGTTGCTTGGCGGCGTTCAGTTCGAGGTCTAGTCGGCACGCTGCCGCAC
GAGGTTGGGCTTGAACCGCCAGCCTCCCGCTCCAAAAAAGGGTCACGAAA
TCGGGTCATCATGGCTGAACCGGTCGAACTGGCTTGAGTTGAAAGGTAGC
TCTTGGAAGGCTAGGGCGAGGAGGGGTGTAGGTGTAGGGGCAGGGAACTG
GAAGAAAAAGGGAGGACTGGGAGAGGCGTCTCCGTTGCTTGGCGGCGTTC
AGTTCGAGGTCTAG
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