mRNA_H-elongata_contig5239.12547.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 350 bits (897), Expect = 4.410e-103 Identity = 219/545 (40.18%), Postives = 311/545 (57.06%), Query Frame = 1
Query: 1 GQIAAATKIGSNSATNGVSIRKPSATLAFVVVSQLQFLGTLSLVDY--TQGAPFERFRGKL--INMWWPLPSSRFVKDMTACTITSAEEGNSIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQERPPPLLDVQNTQVNGNTMGLR---QKHGRKRGIGEEIIE------------CRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYF---------PSGYGHCSSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQN----THNKVNHDEKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
G IA + G + VS R+PSATLAFV+++QLQFL LSLVDY +QG+ F L IN+WWP + T A E ++V F GNLAL G+LL IF +HVAV SG EA + K+RA + A+ I EL +R G+ + P L + + N +R Q+ + G G E++ CR+ S+S WLHFPH+ELVFLFFAF+G VAS IR C + ++A+ + LYPLLM + RT+FVRV PD ++ F+ + P+G G +LS+ + W E SL SWA++G+W+T +T N R+G+WFRIGFEP+FVD+TK GTWF++ISL+E A++A VGV+ + S QL +FC + F +LV LKPFAN++IN + + DA+ TGL A++ S + + SAV + IV L VIP+Y+D V+ R++I+ T ++ + E +IR + R +W WC N+F+CA+DTR+GVRKP
Sbjct: 1399 GAIAPVGETGEGDSPPRVSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPADIGEDIASDGCIFETGASEIGALV-FVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRIIRQTNPGLTDPSPFASRNPSLVRDGSQRTDEEEG-GRELVPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIR--NSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNTPNGRG---GFLSRFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRKRIRKALGKTGQQLTGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTRDGVRKP 1936
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 348 bits (893), Expect = 1.500e-102 Identity = 217/525 (41.33%), Postives = 300/525 (57.14%), Query Frame = 1
Query: 52 VSIRKPSATLAFVVVSQLQFLGTLSLVDY--TQGAPFERFRGKL--INMWWPLPSSRFVKDMTACTITSAEEGNSIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQERPPPLLDVQNTQVNGNTMGLRQKHGRK------RGIG--------EEIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFR-YFPSGYG----HC-SSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQNTHNKVNHDE-----KEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
VS R+PSATLAFV+++QLQFL LSLVDY +QG+ F L IN+WWP + T A E ++V F GNLAL G+LL IF +HVAV SG EA + K+RA + A+ I EL +R G+ R P L + + N +R + R RG+ + CR+ S+S WLHFPH+ELVFLFFAF+G VAS IR C + ++A+ + LYPLLM + RT+FVRV PD ++ F+ Y G +C +LS + W E SL SWA++G+W+T +T N R+G+WFRIGFEP+FVD+TK GTWF++ISL+E A++A VGV+ + S+ QL +FC + F +LV LKPFAN++IN + + DA+STGL A++ S + + SAV + IV L VIP+Y+D V+ R +I+ K + E +IR + R +W WC N+F+CA+DTREGVRKP
Sbjct: 1375 VSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPAEIGEDIVSDGCIFETGASEIGALV-FVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRMIRRTNPGLTDPSPFGSRNPSLVRDRSQRTDEEEGGRGLVPMCSENQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIR--NSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRNRIRKALGKTGQQQLKGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTREGVRKP 1896
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 345 bits (886), Expect = 8.910e-102 Identity = 216/537 (40.22%), Postives = 304/537 (56.61%), Query Frame = 1
Query: 55 SIRKPSATLAFVVVSQLQFLGTLSLVDYT--QGAPFERFRGKL--INMWWPLPSSRFVKDMTACTITSAEEGNSIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQ--ERPPPLLDV-----QNTQVNGNTMGLRQKHG---------------RKRGIGEEIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYF---------PSGYGHCSSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNT---IQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQNTHNKVNHD----EKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
S R+PSATLAFV+++QLQFL TLSLVDY + + F L IN+WWP + + C + G + F GNLAL G+LL IF +HVA SG+EA + K+RA + AA+ G I EL +R LRG + P L D Q Q +G L ++ R + CR+ S+S WLHFPH+ELVFLFFAF+G VAS IR C + ++A+ + LYPLLM + RT+ VRV P+ ++ F+ + PS G LS+ + W E SL SWA++G+W+T +T + + R+G+WFRIGFEP+FVD+TK GTWF++ISL+E AA A VGV+ E S QL +FC +H + F +L+ LKPFAN++IN + V DA+S G+ A S A+ + +N + ++VV + ++ L VIP+Y+D V+ R +I+ K H+ E+E +IR Y R +W WCT N+F+CA+DT EGVRKP
Sbjct: 1188 SNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIAS-DECAFEAGASGIGALVFVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQAR-LRGGRIICRTNPDLADPSPFARQAPQPSGTPSTLHEEESDMSDEEEGGRGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIR--NSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGL---LSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAAS---ALWWEGTNRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGKTGHELTDEEREARHYIRSYTRRQWCGTWCTMLRHNVFACARDTSEGVRKP 1714
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 311 bits (796), Expect = 1.900e-95 Identity = 206/554 (37.18%), Postives = 303/554 (54.69%), Query Frame = 1
Query: 25 IGSNSATNGVSIRKPSATLAFVVVSQLQFLGTLSLVDYT--QGAPFERFRGKL--INMWWPLPSSR---------FVKDMT-ACTI--TSAEEGNSIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQERPPPLLDVQNTQVNGNTMG-LRQKHG--------------------RKRGIGEEIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYFPSGYGHCS------SWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQ-----NT--HNKVNHDEKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRK 1536
+G+ S VS+R PS T+A ++++Q+QFL TLSLVD T + + L +N+W P R F +D + AC I TSA + ++V F GN+ LF LLL I +IH+ + S +EAY + K RA+ E+ AQ GI IR L +R+ + P D + + G + ++H R +G+ + +CR +SSS+WL+FPH+EL+FL FAF+G +AS +R G C V +SA L +YP+LM+ + RT VRV PD++I F+ H + S+LSKVR G +E+ S+ +WAN G W+T ET +EET R+G+ FRIGFEPLFVDFTK +WF + LLE +AC VL ++S QLF+FC +H +SF +LV+ +PFAN+IIN M + DA S + A + S + + +AVV + +V L +IP+Y+D + ++ R KI+ NT + + KE FIR Y+ W WC N+ +C DT G R+
Sbjct: 34 LGAASVQPHVSVRAPSVTIAVLLLTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSVGRTFSSGGERLFQQDGSRACGIEPTSASDIGALV-FLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIRGLGARRA-SRVAHSPDAESDPDELAASASNDGAMSREHAAADSVDVGVDFEEDGIPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMR--GGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEENHGTDGTVPRSFLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMAMLADTAHRWQRTSRAKRMDTAVVVLQLVALVALIIPMYIDASTVILGAIREKIRSLTKSNTCDDGRTEEEAKEERKFIRGYIFRAWGPTWCRMLGSNVLACVADTTRGTRR 583
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 321 bits (823), Expect = 7.490e-94 Identity = 221/608 (36.35%), Postives = 303/608 (49.84%), Query Frame = 1
Query: 73 ATLAFVVVSQLQFLGTLSLVDYTQGA----PFERFRGKLINMWWPLPSSRFVKDMT------------------ACTITSAEEGNSIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRE-LSSRKLRGKKQERPP-PLLDVQ--------------------------NTQVNGNTMGLRQ--------------------KHGRKR----------------------GIG---------EEIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYFPSG-------------YGHCSSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQ-NTHNKVNH----DEKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
A L V V+QLQFL TLSLVD T G P + N+W P + D + C+ + G + F GN L G L+ IFL+HV++ SG+EAY + K+RA E A+ G+SI E S + G++ E+ P P D + N G+ L + + G K+ G+G + ECR+ S S WLHFPH+ELVFLFFA++G VAS +R G C PV +A + L YP+LM + RT FVRV P+++I F + +S+LSKVR GWEE+ SL +WAN+G W+T ET NE T R+G WFRIGFEPLFVDFTKSG WFV +L+E AAL C+G L +ES QL +FC +H +SF +LVV +PFAN++IN M + G DA+ L A+S S +++ + S V+ + + L +IPIY+DT+ +I R ++Q +T H EKE + F+R ++R W R WCT NIF+CA DTREG+R P
Sbjct: 758 AILGAVAVTQLQFLATLSLVDDTGGEDSSLPGFADSFRWANLWPPASFAEEFIDTSDEGQQRRLXXXXXXXXXXGCSWDGSLGGLGSLVFIGNQGLVFGALVLIFLLHVSLVSGVEAYWLAKKRAKEEAARARRLGVSIGEYFSDTHVDGREHEQAPVPEPDARPSGGTTDISVASSFRRRRLRRDPSLLNAAATGSQRRLEKLPALDAPHRSRKVRDGSWVAEDGEKKEARSDDNLSGTDCSDYDEEGGGGLGTLTRAESRLSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAG--CPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVVMLLQLFALCALIIPIYIDTSLILIGAIRSRLQKSTTTTPQHVRTEAEKEEDLFVRHFIRRSWPRTWCTMLGKNIFACASDTREGIRPP 1363
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 301 bits (771), Expect = 8.810e-91 Identity = 204/552 (36.96%), Postives = 300/552 (54.35%), Query Frame = 1
Query: 28 GSNSATNGVSIRKPSATLAFVVVSQLQFLGTLSLVDYTQGAPFERFRGKLINM-W---WPLPS------SRFVKD----------MTACTITSAEEGN-SIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQERP------------------PPLLDVQNTQ-VNGNTMGLRQKHGRKRG------IGEEIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYFPSGYGHCS--SWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQNTHNKVNHDEKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
G+ A + R PSAT+AFV+ SQ+QFL TLS VD T GA F N+ W WP S SR + D T I+ N + F GNLALF+GLL+ IF HV VAS +EAY + K+RA I + G+S+ E+ L G ++P P ++ Q +G ++ G R IG+ + +CR+ S S WLH+PHLEL+FLFFAF+G V S +R N S + ++AV L LYPLLMV M++RT V V PD++I F + S LS+ G + + SL SWA++G+W+T +T N++ R+ +WFRIGFEPLF DFT++G+WF+I +L+E A LA + VL + S+ Q +FC +H ++F +LV KPFAN+++N +A +V DA+ G+ AL+ T +++ + +AV+ I + +AV VIP+YVDTA + R + + + N ++ ++ W R W N+F+C +DTREG+R P
Sbjct: 131 GTAQAATQSTCRSPSATMAFVLTSQIQFLATLSFVD-TTGAEESAFSDLTNNLRWVNLWPSESFSEGIASRIISDEPDQPSDEDDTTPSAISQTVTSNVGSLLFMGNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVISRSLRRGLSLSEIPIA-LSGTWSQQPTMDDGSSAGSQSSGIMQSPQRMERQAVSPYDGGDSKSDEEEGGPRNTRPGNSIGQ-VSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALR--SANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSETEEALAGKPSTLSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFANSVLNAVAAMVMLTDAVCMGMLALAAGTFNGTATAARMDTAVMVIQALCIAVLVIPLYVDTAVSIYGMIRNRKGSVDERENEADRAEREVTKRLTLRLWGRAWFRMVFSNMFACLRDTREGIRGP 677
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE) HSP 1 Score: 291 bits (746), Expect = 7.590e-87 Identity = 196/528 (37.12%), Postives = 278/528 (52.65%), Query Frame = 1
Query: 55 SIRKPSATLAFVVVSQLQFLGTLSLVDYT--QGAPFERFRGKL--INMWWPLP-SSRFVKDMTACTITSAEEGNSIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQ--ERPPPLLDV-----QNTQVNGNTMGLRQKHG---------------RKRGIGEEIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYFPSGY------GHCSSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQNTHNKVNHDEKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
S R+PSATL FV+++QLQFL TLSLVDY + + F L IN+WW D +A + G + F GN+AL G+LL IF IHVA SG+EA + K+ A + AA+ G I EL +R LRG + P L D Q +G L ++ R + CR+ S+S WLHFPH+ELVF FFAF+G VAS IR C + ++A+ + L PLLM + RT+ VRV P+ ++ F+ + G +LS+ + WEE SL SWA++ +W+T +T + + R+G+W RIGFEP+FV++TK GTWF++ISL+E ALA VGV+ E S QL +FC + + F +L+ LKPFAN++ N + V DA+S G+ A S + T ++A + +VVL + + D +E+E +IR Y R +W WCT N+F+CA+DT EGVRKP
Sbjct: 208 SNRRPSATLTFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWLAEVGQNIASDESA--FEAGASGIRALVFVGNVALVKGILLAIFFIHVAAVSGVEALWLTKKPARENLDAARRRGAPIGELQAR-LRGVRIICRTNPDLADPSPFSRQAPHASGTLSTLNEEESDMSDEEEGGRGRVPMRSENRLNPVATCREHSTSAWLHFPHVELVFQFFAFEGAVASFASAIR--NYECPKIFYTAIAAMVLCPLLMFVTVFRTLLVRVRPNVLLIFKTYAEGGTSGDAPSRAGGFLSRFKSSWEENYSLFSWADKRQWETAQTPDRQISREGDWCRIGFEPVFVEYTKRGTWFIVISLVEWVALALVGVMVENSIVQLVLFCGLPSVIFLILMFLKPFANSVTNNIEACVTAIDAISMGVFAAS-----ALWWEGTDRAAHLNTSVVVLQL----------LSLFD---------------EEREARDYIRSYTRRQWCGTWCTVLGHNVFACARDTSEGVRKP 700
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE) HSP 1 Score: 280 bits (716), Expect = 4.470e-79 Identity = 200/556 (35.97%), Postives = 293/556 (52.70%), Query Frame = 1
Query: 28 GSNSATNGVSIRKPSATLAFVVVSQLQFLGTLSLVDYT--QGAPFERFRGKL--INMWWPLPSSRFVKDMTACTIT------------SAEEGNSIVE--------------FAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQERPPPLLDVQ------NTQVNGNTMGLRQKHGRKRG---IGEEIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIF--------VRVLPDSIIEFRYFPSGYGHC--SSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAA---GVIDGFRRKIQNTHNKVNHDEKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
G+ A + R PS+T+A V+ SQ+QFL TLS VD T +G+ L +N+W PS F + + + + S E+G+S F GNLALFAG + IF +H+ +AS +EAY + K+RA +EI A +S SS G + + P L++ Q +T N +T R IG+ + ECR+ S S WLH+PHLELVFLFFAF+G V S +R T + S V ++AV L L + +S F VRV D++I F + G S+ SK+ G +++ SL +WA++G W T +T +E+ R +WFRIGFEPL+ DFT++G+WF + +L+E A LAC+ VL + S+ Q +FC +H M+F +LVV KPFAN+++N M IV DA+ G+ ALS T ++++ I V+ + +AV V+P+YVDT G I R ++ N E+E FI + W R W N+F+C +DTREG+R P
Sbjct: 87 GTGQAATQSTFRNPSSTMALVLTSQIQFLATLSFVDDTGVEGSALSGLTKNLRWVNLW---PSQSFSEGVASWVLCNEPEPTSGEDDDSEEDGDSTQRGISWTVISDVGSFLFMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRARNEIPRALGGDLSTSG-SSTAWSGTRAIQSPQLMEHQALPSWDSTGRNDSTNVQEAARTNTRAGSSIGQ-VSECRELSQSAWLHYPHLELVFLFFAFEGAVTSQVSALRST--SSSTVFYAAVATLTGCNLSRIATMSILGFILFDVRGRVRVRSDALIVFTSNKTDEGSTGKSTLYSKMVTGLKKDSSLFAWADKGHWNTVQTADEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIEWATLACIAVLVDNSAVQCGLFCALHSMTFILLVVCKPFANSVLNTMGAIVMLTDAVCMGMLALSAGTFRMTAAADRIDIVVMVAQHLCIAVLVVPLYVDTLLLVWGAIRNRRGPVKTRDNAAQRAERE---FINRRTLRLWGRTWFNMVGSNVFACVRDTREGIRDP 632
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI) HSP 1 Score: 277 bits (708), Expect = 5.940e-78 Identity = 193/547 (35.28%), Postives = 283/547 (51.74%), Query Frame = 1
Query: 55 SIRKPSATLAFVVVSQLQFLGTLSLVDYT--QGAPFERFRGKL--INMWWPLPSSRFVKDMTACT-------------------------------ITSAEEGN-SIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQERP--PPLLDVQNTQVNGNTMGLRQKHGRKRGIGE--------EIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYFPSG----------YGHCSSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQNTHNKVNHDEKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREG 1527
SIR+PS T+A V + QLQFL TLSLV T + + F L IN+W P + F + T + + + E G+ S F GNL LF +L IFLIH+ VASGIEAY + KR A + AQ G+ +RELS+R P ++ + +G+ G + G+ E +I ECR++S S+WLHFPH+EL++L FAF+G VA+ IR V AV+ L +P+LM F + T F ++ I F P+ Y S+ SKVR+G +E S+ +W+N+G W++ +T +EE R +WFRIGFEPLFVDFT +G+WF + +L+E A A VGV+ + S QL +F + +SF +LVVLKPFAN IIN M V G DA + A++ ++ + S VV + ++ LA +IP+YVDTA ++ R K++ +H + + +IR+Y+ W I+CT N+ + K+T G
Sbjct: 2180 SIRRPSTTMAIVALGQLQFLATLSLVGNTGTEDSKLYDFANNLRWINLW---PPASFARSFTPASMYGELDQEGEDAXXXXXXXXXXXXXXXXXEGVENEESGDLSSGVFVGNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARAQRRGVPVRELSARLSNPWAPFDPNSESQRSLRTAKTSGDDEGEADDTDAEEGMPETVGRSKLSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLL--VLILAVLALLFFPVLMTFNVMCTFFGKIRSKKHIVF--IPNADDAVEAESDLYTSVRSFGSKVRRGLKESYSMFAWSNKGEWESVDTPDEEDKRARDWFRIGFEPLFVDFTGAGSWFAVYALIELVANAVVGVVVDNSVLQLSLFGAFNTVSFLLLVVLKPFANGIINFMGAAVYGIDAACMAVLAVTADKWGGTERASQVDSVVVIVQLLTLAAIIIPLYVDTAFMMVGSIRDKLRGVRED-DHIDADERKYIRRYIWGAWAPIFCTMIRKNVLAFLKETSAG 2718
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE) HSP 1 Score: 263 bits (671), Expect = 1.370e-77 Identity = 154/368 (41.85%), Postives = 203/368 (55.16%), Query Frame = 1
Query: 565 IIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYFPSGYGHCSSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLES------------------AALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFAN--------------------TIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQN-THNKVNHDEKEIET----FIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
+ ECR+ S WLHFPH+ELVFLFFA++G VAS +R G C PV +A + L YP+LM + RT FVRV P++ I F LSKVR GWEE+ SL +WAN+G W+T ET NE R+G WFRIGFEPLFVDFTKSG WFV +L+E AAL C+G L +ES QL +FC +H +SF +LVV +PFAN ++IN M + G DA+ L A+S S ++ + SAV+ + + +IPIY+DT+ +I+ R ++Q T H E E F+R ++R W R WCT NIF+CA DT EG+R P
Sbjct: 164 VAECREHSQFAWLHFPHVELVFLFFAYEGAVASQVSALREAG--CLPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTPIVF-------------LSKVRAGWEEDHSLFAWANKGTWETAETDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANRLERKTQRVRFLDRLYFRAHSVINAMGAGLVGIDAVCMALLAVSASRWEGTVAAGKVDSAVMLLQLFARCALIIPIYIDTSLMLIEAIRSRLQKCTTTAPQHVRTEAEKVEDLFVRHFIRRSWPRTWCTILGKNIFACASDTSEGIRPP 516 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5239.12547.1 >prot_H-elongata_contig5239.12547.1 ID=prot_H-elongata_contig5239.12547.1|Name=mRNA_H-elongata_contig5239.12547.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=513bp GQIAAATKIGSNSATNGVSIRKPSATLAFVVVSQLQFLGTLSLVDYTQGAback to top mRNA from alignment at H-elongata_contig5239:1584..5500+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5239.12547.1 ID=mRNA_H-elongata_contig5239.12547.1|Name=mRNA_H-elongata_contig5239.12547.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3917bp|location=Sequence derived from alignment at H-elongata_contig5239:1584..5500+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5239:1584..5500+ >mRNA_H-elongata_contig5239.12547.1 ID=mRNA_H-elongata_contig5239.12547.1|Name=mRNA_H-elongata_contig5239.12547.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3078bp|location=Sequence derived from alignment at H-elongata_contig5239:1584..5500+ (Himanthalia elongata Himel1 dioecious)back to top |