mRNA_H-elongata_contig5239.12547.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5239.12547.1
Unique NamemRNA_H-elongata_contig5239.12547.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 4.410e-103
Identity = 219/545 (40.18%), Postives = 311/545 (57.06%), Query Frame = 1
Query:    1 GQIAAATKIGSNSATNGVSIRKPSATLAFVVVSQLQFLGTLSLVDY--TQGAPFERFRGKL--INMWWPLPSSRFVKDMTACTITSAEEGNSIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQERPPPLLDVQNTQVNGNTMGLR---QKHGRKRGIGEEIIE------------CRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYF---------PSGYGHCSSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQN----THNKVNHDEKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
            G IA   + G   +   VS R+PSATLAFV+++QLQFL  LSLVDY  +QG+    F   L  IN+WWP      +        T A E  ++V F GNLAL  G+LL IF +HVAV SG EA  + K+RA   +  A+     I EL +R   G+   +  P L   +   + N   +R   Q+   + G G E++             CR+ S+S WLHFPH+ELVFLFFAF+G VAS    IR     C  + ++A+  + LYPLLM   + RT+FVRV PD ++ F+ +         P+G G    +LS+ +  W E  SL SWA++G+W+T +T N    R+G+WFRIGFEP+FVD+TK GTWF++ISL+E A++A VGV+ + S  QL +FC +    F +LV LKPFAN++IN +   +   DA+ TGL A++       S +  + SAV  + IV L   VIP+Y+D    V+   R++I+     T  ++  +  E   +IR + R +W   WC     N+F+CA+DTR+GVRKP
Sbjct: 1399 GAIAPVGETGEGDSPPRVSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPADIGEDIASDGCIFETGASEIGALV-FVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRIIRQTNPGLTDPSPFASRNPSLVRDGSQRTDEEEG-GRELVPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIR--NSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNTPNGRG---GFLSRFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRKRIRKALGKTGQQLTGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTRDGVRKP 1936          
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI)

HSP 1 Score: 348 bits (893), Expect = 1.500e-102
Identity = 217/525 (41.33%), Postives = 300/525 (57.14%), Query Frame = 1
Query:   52 VSIRKPSATLAFVVVSQLQFLGTLSLVDY--TQGAPFERFRGKL--INMWWPLPSSRFVKDMTACTITSAEEGNSIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQERPPPLLDVQNTQVNGNTMGLRQKHGRK------RGIG--------EEIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFR-YFPSGYG----HC-SSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQNTHNKVNHDE-----KEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
            VS R+PSATLAFV+++QLQFL  LSLVDY  +QG+    F   L  IN+WWP      +        T A E  ++V F GNLAL  G+LL IF +HVAV SG EA  + K+RA   +  A+     I EL +R   G+   R  P L   +   + N   +R +  R       RG+           +  CR+ S+S WLHFPH+ELVFLFFAF+G VAS    IR     C  + ++A+  + LYPLLM   + RT+FVRV PD ++ F+ Y   G      +C   +LS  +  W E  SL SWA++G+W+T +T N    R+G+WFRIGFEP+FVD+TK GTWF++ISL+E A++A VGV+ + S+ QL +FC +    F +LV LKPFAN++IN +   +   DA+STGL A++       S +  + SAV  + IV L   VIP+Y+D    V+   R +I+    K    +      E   +IR + R +W   WC     N+F+CA+DTREGVRKP
Sbjct: 1375 VSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPAEIGEDIVSDGCIFETGASEIGALV-FVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRMIRRTNPGLTDPSPFGSRNPSLVRDRSQRTDEEEGGRGLVPMCSENQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIR--NSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRNRIRKALGKTGQQQLKGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTREGVRKP 1896          
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI)

HSP 1 Score: 345 bits (886), Expect = 8.910e-102
Identity = 216/537 (40.22%), Postives = 304/537 (56.61%), Query Frame = 1
Query:   55 SIRKPSATLAFVVVSQLQFLGTLSLVDYT--QGAPFERFRGKL--INMWWPLPSSRFVKDMTACTITSAEEGNSIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQ--ERPPPLLDV-----QNTQVNGNTMGLRQKHG---------------RKRGIGEEIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYF---------PSGYGHCSSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNT---IQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQNTHNKVNHD----EKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
            S R+PSATLAFV+++QLQFL TLSLVDY   + +    F   L  IN+WWP    + +     C   +   G   + F GNLAL  G+LL IF +HVA  SG+EA  + K+RA   + AA+  G  I EL +R LRG +      P L D      Q  Q +G    L ++                 R       +  CR+ S+S WLHFPH+ELVFLFFAF+G VAS    IR     C  + ++A+  + LYPLLM   + RT+ VRV P+ ++ F+ +         PS  G     LS+ +  W E  SL SWA++G+W+T +T + +  R+G+WFRIGFEP+FVD+TK GTWF++ISL+E AA A VGV+ E S  QL +FC +H + F +L+ LKPFAN++IN +   V   DA+S G+ A S   A+ +  +N    + ++VV + ++ L   VIP+Y+D    V+   R +I+    K  H+    E+E   +IR Y R +W   WCT    N+F+CA+DT EGVRKP
Sbjct: 1188 SNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIAS-DECAFEAGASGIGALVFVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQAR-LRGGRIICRTNPDLADPSPFARQAPQPSGTPSTLHEEESDMSDEEEGGRGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIR--NSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGL---LSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAAS---ALWWEGTNRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGKTGHELTDEEREARHYIRSYTRRQWCGTWCTMLRHNVFACARDTSEGVRKP 1714          
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI)

HSP 1 Score: 311 bits (796), Expect = 1.900e-95
Identity = 206/554 (37.18%), Postives = 303/554 (54.69%), Query Frame = 1
Query:   25 IGSNSATNGVSIRKPSATLAFVVVSQLQFLGTLSLVDYT--QGAPFERFRGKL--INMWWPLPSSR---------FVKDMT-ACTI--TSAEEGNSIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQERPPPLLDVQNTQVNGNTMG-LRQKHG--------------------RKRGIGEEIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYFPSGYGHCS------SWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQ-----NT--HNKVNHDEKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRK 1536
            +G+ S    VS+R PS T+A ++++Q+QFL TLSLVD T  + +        L  +N+W P    R         F +D + AC I  TSA +  ++V F GN+ LF  LLL I +IH+ + S +EAY + K RA+ E+  AQ  GI IR L +R+   +    P    D      + +  G + ++H                     R +G+   + +CR +SSS+WL+FPH+EL+FL FAF+G +AS    +R  G  C  V +SA   L +YP+LM+ +  RT  VRV PD++I F+       H +      S+LSKVR G +E+ S+ +WAN G W+T ET +EET R+G+ FRIGFEPLFVDFTK  +WF +  LLE   +AC  VL ++S  QLF+FC +H +SF +LV+ +PFAN+IIN M   +   DA S  + A +       S +  + +AVV + +V L   +IP+Y+D +  ++   R KI+     NT    +   + KE   FIR Y+   W   WC     N+ +C  DT  G R+
Sbjct:   34 LGAASVQPHVSVRAPSVTIAVLLLTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSVGRTFSSGGERLFQQDGSRACGIEPTSASDIGALV-FLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIRGLGARRA-SRVAHSPDAESDPDELAASASNDGAMSREHAAADSVDVGVDFEEDGIPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMR--GGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEENHGTDGTVPRSFLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMAMLADTAHRWQRTSRAKRMDTAVVVLQLVALVALIIPMYIDASTVILGAIREKIRSLTKSNTCDDGRTEEEAKEERKFIRGYIFRAWGPTWCRMLGSNVLACVADTTRGTRR 583          
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 7.490e-94
Identity = 221/608 (36.35%), Postives = 303/608 (49.84%), Query Frame = 1
Query:   73 ATLAFVVVSQLQFLGTLSLVDYTQGA----PFERFRGKLINMWWPLPSSRFVKDMT------------------ACTITSAEEGNSIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRE-LSSRKLRGKKQERPP-PLLDVQ--------------------------NTQVNGNTMGLRQ--------------------KHGRKR----------------------GIG---------EEIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYFPSG-------------YGHCSSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQ-NTHNKVNH----DEKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
            A L  V V+QLQFL TLSLVD T G     P      +  N+W P   +    D +                   C+   +  G   + F GN  L  G L+ IFL+HV++ SG+EAY + K+RA  E   A+  G+SI E  S   + G++ E+ P P  D +                          N    G+   L +                    + G K+                      G+G           + ECR+ S S WLHFPH+ELVFLFFA++G VAS    +R  G  C PV  +A + L  YP+LM   + RT FVRV P+++I F    +                  +S+LSKVR GWEE+ SL +WAN+G W+T ET NE T R+G WFRIGFEPLFVDFTKSG WFV  +L+E AAL C+G L +ES  QL +FC +H +SF +LVV +PFAN++IN M   + G DA+   L A+S S     +++  + S V+ + +  L   +IPIY+DT+  +I   R ++Q +T     H     EKE + F+R ++R  W R WCT    NIF+CA DTREG+R P
Sbjct:  758 AILGAVAVTQLQFLATLSLVDDTGGEDSSLPGFADSFRWANLWPPASFAEEFIDTSDEGQQRRLXXXXXXXXXXGCSWDGSLGGLGSLVFIGNQGLVFGALVLIFLLHVSLVSGVEAYWLAKKRAKEEAARARRLGVSIGEYFSDTHVDGREHEQAPVPEPDARPSGGTTDISVASSFRRRRLRRDPSLLNAAATGSQRRLEKLPALDAPHRSRKVRDGSWVAEDGEKKEARSDDNLSGTDCSDYDEEGGGGLGTLTRAESRLSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAG--CPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVVMLLQLFALCALIIPIYIDTSLILIGAIRSRLQKSTTTTPQHVRTEAEKEEDLFVRHFIRRSWPRTWCTMLGKNIFACASDTREGIRPP 1363          
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 8.810e-91
Identity = 204/552 (36.96%), Postives = 300/552 (54.35%), Query Frame = 1
Query:   28 GSNSATNGVSIRKPSATLAFVVVSQLQFLGTLSLVDYTQGAPFERFRGKLINM-W---WPLPS------SRFVKD----------MTACTITSAEEGN-SIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQERP------------------PPLLDVQNTQ-VNGNTMGLRQKHGRKRG------IGEEIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYFPSGYGHCS--SWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQNTHNKVNHDEKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
            G+  A    + R PSAT+AFV+ SQ+QFL TLS VD T GA    F     N+ W   WP  S      SR + D           T   I+     N   + F GNLALF+GLL+ IF  HV VAS +EAY + K+RA   I  +   G+S+ E+    L G   ++P                  P  ++ Q     +G      ++ G  R       IG+ + +CR+ S S WLH+PHLEL+FLFFAF+G V S    +R    N S + ++AV  L LYPLLMV M++RT  V V PD++I F    +        S LS+   G + + SL SWA++G+W+T +T N++  R+ +WFRIGFEPLF DFT++G+WF+I +L+E A LA + VL + S+ Q  +FC +H ++F +LV  KPFAN+++N +A +V   DA+  G+ AL+  T    +++  + +AV+ I  + +AV VIP+YVDTA  +    R +  +   + N  ++      ++     W R W      N+F+C +DTREG+R P
Sbjct:  131 GTAQAATQSTCRSPSATMAFVLTSQIQFLATLSFVD-TTGAEESAFSDLTNNLRWVNLWPSESFSEGIASRIISDEPDQPSDEDDTTPSAISQTVTSNVGSLLFMGNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVISRSLRRGLSLSEIPIA-LSGTWSQQPTMDDGSSAGSQSSGIMQSPQRMERQAVSPYDGGDSKSDEEEGGPRNTRPGNSIGQ-VSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALR--SANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSETEEALAGKPSTLSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFANSVLNAVAAMVMLTDAVCMGMLALAAGTFNGTATAARMDTAVMVIQALCIAVLVIPLYVDTAVSIYGMIRNRKGSVDERENEADRAEREVTKRLTLRLWGRAWFRMVFSNMFACLRDTREGIRGP 677          
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 7.590e-87
Identity = 196/528 (37.12%), Postives = 278/528 (52.65%), Query Frame = 1
Query:   55 SIRKPSATLAFVVVSQLQFLGTLSLVDYT--QGAPFERFRGKL--INMWWPLP-SSRFVKDMTACTITSAEEGNSIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQ--ERPPPLLDV-----QNTQVNGNTMGLRQKHG---------------RKRGIGEEIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYFPSGY------GHCSSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQNTHNKVNHDEKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
            S R+PSATL FV+++QLQFL TLSLVDY   + +    F   L  IN+WW          D +A    +   G   + F GN+AL  G+LL IF IHVA  SG+EA  + K+ A   + AA+  G  I EL +R LRG +      P L D      Q    +G    L ++                 R       +  CR+ S+S WLHFPH+ELVF FFAF+G VAS    IR     C  + ++A+  + L PLLM   + RT+ VRV P+ ++ F+ +  G            +LS+ +  WEE  SL SWA++ +W+T +T + +  R+G+W RIGFEP+FV++TK GTWF++ISL+E  ALA VGV+ E S  QL +FC +  + F +L+ LKPFAN++ N +   V   DA+S G+ A S     +     T ++A +   +VVL +            + D               +E+E   +IR Y R +W   WCT    N+F+CA+DT EGVRKP
Sbjct:  208 SNRRPSATLTFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWLAEVGQNIASDESA--FEAGASGIRALVFVGNVALVKGILLAIFFIHVAAVSGVEALWLTKKPARENLDAARRRGAPIGELQAR-LRGVRIICRTNPDLADPSPFSRQAPHASGTLSTLNEEESDMSDEEEGGRGRVPMRSENRLNPVATCREHSTSAWLHFPHVELVFQFFAFEGAVASFASAIR--NYECPKIFYTAIAAMVLCPLLMFVTVFRTLLVRVRPNVLLIFKTYAEGGTSGDAPSRAGGFLSRFKSSWEENYSLFSWADKRQWETAQTPDRQISREGDWCRIGFEPVFVEYTKRGTWFIVISLVEWVALALVGVMVENSIVQLVLFCGLPSVIFLILMFLKPFANSVTNNIEACVTAIDAISMGVFAAS-----ALWWEGTDRAAHLNTSVVVLQL----------LSLFD---------------EEREARDYIRSYTRRQWCGTWCTVLGHNVFACARDTSEGVRKP 700          
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 4.470e-79
Identity = 200/556 (35.97%), Postives = 293/556 (52.70%), Query Frame = 1
Query:   28 GSNSATNGVSIRKPSATLAFVVVSQLQFLGTLSLVDYT--QGAPFERFRGKL--INMWWPLPSSRFVKDMTACTIT------------SAEEGNSIVE--------------FAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQERPPPLLDVQ------NTQVNGNTMGLRQKHGRKRG---IGEEIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIF--------VRVLPDSIIEFRYFPSGYGHC--SSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAA---GVIDGFRRKIQNTHNKVNHDEKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
            G+  A    + R PS+T+A V+ SQ+QFL TLS VD T  +G+        L  +N+W   PS  F + + +  +             S E+G+S                 F GNLALFAG  + IF +H+ +AS +EAY + K+RA +EI  A    +S    SS    G +  + P L++ Q      +T  N +T          R    IG+ + ECR+ S S WLH+PHLELVFLFFAF+G V S    +R T  + S V ++AV  L    L  +  +S   F        VRV  D++I F    +  G    S+  SK+  G +++ SL +WA++G W T +T +E+  R  +WFRIGFEPL+ DFT++G+WF + +L+E A LAC+ VL + S+ Q  +FC +H M+F +LVV KPFAN+++N M  IV   DA+  G+ ALS  T    ++++ I   V+    + +AV V+P+YVDT     G I   R  ++   N     E+E   FI +     W R W      N+F+C +DTREG+R P
Sbjct:   87 GTGQAATQSTFRNPSSTMALVLTSQIQFLATLSFVDDTGVEGSALSGLTKNLRWVNLW---PSQSFSEGVASWVLCNEPEPTSGEDDDSEEDGDSTQRGISWTVISDVGSFLFMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRARNEIPRALGGDLSTSG-SSTAWSGTRAIQSPQLMEHQALPSWDSTGRNDSTNVQEAARTNTRAGSSIGQ-VSECRELSQSAWLHYPHLELVFLFFAFEGAVTSQVSALRST--SSSTVFYAAVATLTGCNLSRIATMSILGFILFDVRGRVRVRSDALIVFTSNKTDEGSTGKSTLYSKMVTGLKKDSSLFAWADKGHWNTVQTADEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIEWATLACIAVLVDNSAVQCGLFCALHSMTFILLVVCKPFANSVLNTMGAIVMLTDAVCMGMLALSAGTFRMTAAADRIDIVVMVAQHLCIAVLVVPLYVDTLLLVWGAIRNRRGPVKTRDNAAQRAERE---FINRRTLRLWGRTWFNMVGSNVFACVRDTREGIRDP 632          
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 5.940e-78
Identity = 193/547 (35.28%), Postives = 283/547 (51.74%), Query Frame = 1
Query:   55 SIRKPSATLAFVVVSQLQFLGTLSLVDYT--QGAPFERFRGKL--INMWWPLPSSRFVKDMTACT-------------------------------ITSAEEGN-SIVEFAGNLALFAGLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLRGKKQERP--PPLLDVQNTQVNGNTMGLRQKHGRKRGIGE--------EIIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYFPSG----------YGHCSSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLESAALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQNTHNKVNHDEKEIETFIRQYMRARWVRIWCTTFSFNIFSCAKDTREG 1527
            SIR+PS T+A V + QLQFL TLSLV  T  + +    F   L  IN+W   P + F +  T  +                               + + E G+ S   F GNL LF  +L  IFLIH+ VASGIEAY + KR A   +  AQ  G+ +RELS+R         P       ++  + +G+  G       + G+ E        +I ECR++S S+WLHFPH+EL++L FAF+G VA+    IR        V   AV+ L  +P+LM F +  T F ++     I F   P+           Y    S+ SKVR+G +E  S+ +W+N+G W++ +T +EE  R  +WFRIGFEPLFVDFT +G+WF + +L+E  A A VGV+ + S  QL +F   + +SF +LVVLKPFAN IIN M   V G DA    + A++         ++ + S VV + ++ LA  +IP+YVDTA  ++   R K++      +H + +   +IR+Y+   W  I+CT    N+ +  K+T  G
Sbjct: 2180 SIRRPSTTMAIVALGQLQFLATLSLVGNTGTEDSKLYDFANNLRWINLW---PPASFARSFTPASMYGELDQEGEDAXXXXXXXXXXXXXXXXXEGVENEESGDLSSGVFVGNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARAQRRGVPVRELSARLSNPWAPFDPNSESQRSLRTAKTSGDDEGEADDTDAEEGMPETVGRSKLSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLL--VLILAVLALLFFPVLMTFNVMCTFFGKIRSKKHIVF--IPNADDAVEAESDLYTSVRSFGSKVRRGLKESYSMFAWSNKGEWESVDTPDEEDKRARDWFRIGFEPLFVDFTGAGSWFAVYALIELVANAVVGVVVDNSVLQLSLFGAFNTVSFLLLVVLKPFANGIINFMGAAVYGIDAACMAVLAVTADKWGGTERASQVDSVVVIVQLLTLAAIIIPLYVDTAFMMVGSIRDKLRGVRED-DHIDADERKYIRRYIWGAWAPIFCTMIRKNVLAFLKETSAG 2718          
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 1.370e-77
Identity = 154/368 (41.85%), Postives = 203/368 (55.16%), Query Frame = 1
Query:  565 IIECRDKSSSIWLHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLLMVFMISRTIFVRVLPDSIIEFRYFPSGYGHCSSWLSKVRKGWEEEGSLLSWANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLES------------------AALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFAN--------------------TIINCMAVIVEGADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTAAGVIDGFRRKIQN-THNKVNHDEKEIET----FIRQYMRARWVRIWCTTFSFNIFSCAKDTREGVRKP 1539
            + ECR+ S   WLHFPH+ELVFLFFA++G VAS    +R  G  C PV  +A + L  YP+LM   + RT FVRV P++ I F             LSKVR GWEE+ SL +WAN+G W+T ET NE   R+G WFRIGFEPLFVDFTKSG WFV  +L+E                   AAL C+G L +ES  QL +FC +H +SF +LVV +PFAN                    ++IN M   + G DA+   L A+S S      ++  + SAV+ + +      +IPIY+DT+  +I+  R ++Q  T     H   E E     F+R ++R  W R WCT    NIF+CA DT EG+R P
Sbjct:  164 VAECREHSQFAWLHFPHVELVFLFFAYEGAVASQVSALREAG--CLPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTPIVF-------------LSKVRAGWEEDHSLFAWANKGTWETAETDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANRLERKTQRVRFLDRLYFRAHSVINAMGAGLVGIDAVCMALLAVSASRWEGTVAAGKVDSAVMLLQLFARCALIIPIYIDTSLMLIEAIRSRLQKCTTTAPQHVRTEAEKVEDLFVRHFIRRSWPRTWCTILGKNIFACASDTSEGIRPP 516          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5239.12547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JD90_9PHAE4.410e-10340.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLG6_ECTSI1.500e-10241.33Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FWS4_ECTSI8.910e-10240.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1L9_ECTSI1.900e-9537.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LN93_ECTSI7.490e-9436.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9C2_9PHAE8.810e-9136.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JR60_9PHAE7.590e-8737.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTJ3_9PHAE4.470e-7935.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN89_ECTSI5.940e-7835.28Liver stage antigen 3 n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5KV63_9PHAE1.370e-7741.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5239contigH-elongata_contig5239:1584..5500 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score98.6
Seed ortholog evalue9e-18
Seed eggNOG ortholog2880.D8LIK9
EggNOG free text desc.structural constituent of cuticle
EggNOG OGsKOG3544@1,KOG3544@2759
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size1539
Cds size1539
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930856.979687-CDS-H-elongata_contig5239:1583..17561622930856.979687-CDS-H-elongata_contig5239:1583..1756Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5239 1584..1756 +
1691679599.8497274-CDS-H-elongata_contig5239:1583..17561691679599.8497274-CDS-H-elongata_contig5239:1583..1756Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5239 1584..1756 +
1622930856.9951575-CDS-H-elongata_contig5239:2159..27181622930856.9951575-CDS-H-elongata_contig5239:2159..2718Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5239 2160..2718 +
1691679599.862397-CDS-H-elongata_contig5239:2159..27181691679599.862397-CDS-H-elongata_contig5239:2159..2718Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5239 2160..2718 +
1622930857.0095975-CDS-H-elongata_contig5239:3435..37501622930857.0095975-CDS-H-elongata_contig5239:3435..3750Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5239 3436..3750 +
1691679599.8732355-CDS-H-elongata_contig5239:3435..37501691679599.8732355-CDS-H-elongata_contig5239:3435..3750Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5239 3436..3750 +
1622930857.0340536-CDS-H-elongata_contig5239:4007..41291622930857.0340536-CDS-H-elongata_contig5239:4007..4129Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5239 4008..4129 +
1691679599.8809588-CDS-H-elongata_contig5239:4007..41291691679599.8809588-CDS-H-elongata_contig5239:4007..4129Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5239 4008..4129 +
1622930857.0529637-CDS-H-elongata_contig5239:4416..45651622930857.0529637-CDS-H-elongata_contig5239:4416..4565Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5239 4417..4565 +
1691679599.888676-CDS-H-elongata_contig5239:4416..45651691679599.888676-CDS-H-elongata_contig5239:4416..4565Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5239 4417..4565 +
1622930857.0712574-CDS-H-elongata_contig5239:4972..50761622930857.0712574-CDS-H-elongata_contig5239:4972..5076Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5239 4973..5076 +
1691679599.89648-CDS-H-elongata_contig5239:4972..50761691679599.89648-CDS-H-elongata_contig5239:4972..5076Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5239 4973..5076 +
1622930857.0890806-CDS-H-elongata_contig5239:5383..55001622930857.0890806-CDS-H-elongata_contig5239:5383..5500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5239 5384..5500 +
1691679599.9043431-CDS-H-elongata_contig5239:5383..55001691679599.9043431-CDS-H-elongata_contig5239:5383..5500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5239 5384..5500 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5239.12547.1prot_H-elongata_contig5239.12547.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5239 1584..5500 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5239.12547.1

>prot_H-elongata_contig5239.12547.1 ID=prot_H-elongata_contig5239.12547.1|Name=mRNA_H-elongata_contig5239.12547.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=513bp
GQIAAATKIGSNSATNGVSIRKPSATLAFVVVSQLQFLGTLSLVDYTQGA
PFERFRGKLINMWWPLPSSRFVKDMTACTITSAEEGNSIVEFAGNLALFA
GLLLCIFLIHVAVASGIEAYMMLKRRALSEIKAAQDEGISIRELSSRKLR
GKKQERPPPLLDVQNTQVNGNTMGLRQKHGRKRGIGEEIIECRDKSSSIW
LHFPHLELVFLFFAFQGVVASHTRVIRFTGLNCSPVSFSAVMVLALYPLL
MVFMISRTIFVRVLPDSIIEFRYFPSGYGHCSSWLSKVRKGWEEEGSLLS
WANRGRWQTTETTNEETYRQGNWFRIGFEPLFVDFTKSGTWFVIISLLES
AALACVGVLTEESSWQLFMFCIIHIMSFSVLVVLKPFANTIINCMAVIVE
GADALSTGLTALSESTAISFSSSNTIQSAVVCIHIVVLAVSVIPIYVDTA
AGVIDGFRRKIQNTHNKVNHDEKEIETFIRQYMRARWVRIWCTTFSFNIF
SCAKDTREGVRKP
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mRNA from alignment at H-elongata_contig5239:1584..5500+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5239.12547.1 ID=mRNA_H-elongata_contig5239.12547.1|Name=mRNA_H-elongata_contig5239.12547.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3917bp|location=Sequence derived from alignment at H-elongata_contig5239:1584..5500+ (Himanthalia elongata Himel1 dioecious)
GGTCAAATTGCAGCCGCTACTAAAATTGGTTCGAATAGTGCTACAAACGG CGTGAGTATACGAAAGCCATCAGCAACTCTGGCGTTCGTCGTGGTATCTC AGTTACAGTTTCTCGGTACGCTATCGCTGGTTGATTACACCCAAGGGGCG CCCTTTGAAAGGTTTCGTGGAAAGTTTCAGGTGAGGCATTTTTTTTTTTT ATCTTGAACTTATTACAACCCTCAGAACATCCACGCCTTCTTTGTGCCAT GAGAGGTGTAGTCCAGTGGACCAACTGTCGTCAGGTTTTTGAATGTGTAC ATTACATTACTACCTTTGAGCACAAAATCGTCACACGTGGTTAATCGTGT TCCCCAATAATAGTAAGTTCATCGGGTTAACGGAATAATAATTATTTGTT GTTATTATGGGCCCCCTAGTTTGTACTGTGCTGATTTAGAATCCTTTCGC TCCCCGATAAAGTATGGTGCACCTTTCCCGAAATCTCAATGATAAGGAGC AGCTGATGCTCATCCAGGGCACGAAAAATCGAAGACTGATACTATGCTAT CGTGTCCCTCTGTCTCGATATTCAAGGTTAATAAATATGTGGTGGCCACT ACCGTCATCAAGGTTTGTTAAAGATATGACGGCTTGCACAATCACAAGTG CTGAGGAGGGCAATAGCATCGTAGAGTTCGCTGGGAATTTGGCCCTCTTC GCCGGGCTCCTCCTTTGCATCTTTTTGATCCACGTGGCAGTTGCATCCGG CATAGAGGCGTACATGATGCTTAAGAGGAGAGCACTAAGTGAAATCAAGG CAGCCCAAGACGAAGGAATTTCCATACGCGAATTATCTTCGAGGAAGCTA CGTGGAAAAAAACAAGAACGACCGCCACCACTCCTCGATGTTCAAAATAC TCAAGTTAACGGGAATACGATGGGCCTTAGACAGAAGCATGGCAGGAAAA GGGGCATCGGGGAAGAAATCATCGAGTGTCGGGATAAGTCGAGCTCCATT TGGCTTCATTTTCCCCATCTCGAGCTCGTTTTCCTCTTTTTTGCATTTCA AGGGGTCGTGGCTTCACACACGCGAGTTATTCGCTTCACAGGGCTCAATT GCTCACCCGTGTCCTTCTCAGCCGTAATGGTTTTGGTGAGAGACAAAAGG GTTTATTCCGCGACCGGCTTGTGCTTGACTGTATGTTTTATCCTCCCTGT ACTATGCAATGGTGGTGTTTACCTCTTTATGACGGAGTCCTGGAACCAAT GCCCTAGAGGTGCTCACAAAACAAACTGCCTTTTAGACGCACGCTTTGTT GTATAGTACTGCCCCGCTAGTAAGAAACACACCATTAAGAAAATCATGCT GAAATTTTTGAGAATTTAAGAAACGGCCCAGGCTCGGCATCTGCCACAAC CTAAGAAAGAGCAACATTTCCCCTGGCGGGACGTCTTGCATCTAAATATC GGCTGCCCCGCCCGGGCGACTTGGCTACATTATCTCTCAGTTTTATGTGC TACTTATGAACAGTAGTGCTGTTTGTGTTATTAGTACAGGAACGCATACG TACTGTATTTATAAAATCTTACGCTTTTGAATGTCCCACAAAAAAGCCTT TCCAACCATCTGTGCTGGCAAAATAAGAAAGGCACCTTTAAGAAAATCAT GCTAATTTTCCCAGAAAATAAGAAACCCACCCTCAGGCCGATTTTTGGTT TCTTATTAACGGGCCGATAGTGTCCTCACAGTCACAGTTATGAAGCTTTT TTTTGCGAAGCCTTTCATTCATAGCGTGTAATAAAAACTACTTCTAGTTT ATTGTTAAGCATTTTGACCTGAATTCCTACGCCGCGTCAATCCGCCCCAC AGGCTCTTTATCCCTTGCTTATGGTCTTCATGATCTCGCGAACAATCTTC GTCCGAGTGCTTCCTGATTCAATCATCGAGTTCCGATATTTTCCCTCGGG ATACGGTCATTGTAGCAGCTGGTTGTCGAAAGTTCGAAAGGGTTGGGAGG AGGAAGGGAGCTTGCTCTCGTGGGCAAACCGAGGACGATGGCAAACGACG GAAACGACCAATGAAGAGACATATCGACAGGGAAATTGGTTCCGCATTGG ATTCGAACCGCTGTTCGTCGACTTCACCAAGTCGGGAACATGGTTTGTCA TTATTTCCCTGCTCGAGGTACGTGCACGGGATATATCATCCGTGAAGCTA CATCGCACGCCAGCCTGTCGGTTGTGGTGGTTTTGTTGCTTCCGGATAAT AATTAGCTTTGGCCATTGCTAGTTTTGTCATGATGCCCATATTTTATGCA GCCATGGTTATGGGCTTTTTTCAATATCGCACCAATATCGCAAAGCCAAC TATTCTACCTTCACAACGTATCGTGCCTAAACCCGATGTTTCCAAATCCG ATTTTGACTACGCTTGAACAACAGTCTGCAGCACTTGCATGTGTGGGGGT CCTGACTGAAGAAAGTTCGTGGCAGCTTTTTATGTTTTGCATCATACACA TTATGTCCTTCTCGGTGCTGGTCGTGCTGAAGCCCTTTGCCAACACGTGA GATCGATATACACTCGCCCCATTGGGTTGCGCTTGGAAGCAGTGAGGTTT TGAAACTTACTCCGTACTCAAACTCCTATCCGTAGCGAATGCACATGCAA TAACATGCGCTCGCAAAACCAACGGTTCTCACGACATATGGTAATTTCGT GTGACCCCAGTACCAGTCGCAGTCTCTTCGGTGAGGTTTTGTCAGAGACG GTTCTCTCTCCTCAACATTATTTCCATTTTCTCTTGCGGCTACTCTCTTC TTATCCCTCTCCAACGTTTTATCGATTACCTAGGATTATCAATTGCATGG CGGTGATAGTAGAAGGGGCGGACGCTCTAAGCACTGGGTTAACGGCCTTG TCGGAGAGCACCGCGATAAGCTTCTCGAGCTCGAACACGATCCAGTCAGC GGTCGTGTGTATTCATATAGTGGTTCTCGCTGGTGAGTGTTACGTGTTAC TAACAGAGTATTTAACCGAGATGGGGTAGAATAAAGTCACTCGGAGTGCA AAACTTAGCTTGTTGCGCTTAGCTGCATTTTCCTCCTTTTACCCTTGGAG CAACGAGTAGGAGAGGGCGGCATTAACAATTTTTAGCTACGTATTTAGCG CCAGATGTCAGTTTTCGTAGTGCGAACATGATGACTTGCGCATGTTTCTT TGTGTACTCGGTCGGTGTGCGATAGGCACTGAAAGAAGCTAGATTCCTCT GAGTTTGCCAGAAAGAAGAAACATCAACAATAAAAGGCGCTACTTGCGAC GTCAGGCACTATCGTACGACTTACTCTTATAATAACAAACATTTCAACAT GTTACTTTGTGCTCCCGCCCTACCGTCGTTTGCAACAAGTGTCGGTTATT CCAATCTATGTTGACACTGCCGCCGGGGTGATAGATGGCTTCAGGAGGAA AATTCAGAATACCCATAATAAAGTAAACCACGACGAAAAAGAGGTGAGCT TTAGTTTGCTATGCCGCGCATTCAATGCTAACCCTCTTCGATTGACAGTA GCTTTGGAGGTTCAAGTAATTTTGAGTTGTGCCTTTCGAAACTTAAGGCT ATGCGATATTTAGAGAGCACGCCTGTTTTCATGCCCGTCTTCCGCTGGGT GATATAATTTGATTGAAGTCGCGCGTCAGCACATAATGAAAGCGAACACC ACGCCACCCTAATCCGGCATATAGGAAATATGTCGCAGCGTCTGGATTCT TTGTGTACAATTTCTCCTTCGCGCCACGCATGACGATCGCGAGCCTACAG ATTGAAACTTTCATCCGTCAGTATATGCGAGCGAGGTGGGTTCGCATATG GTGCACGACATTCTCCTTCAACATATTTTCTTGTGCGAAAGACACCCGCG AAGGAGTCCGTAAGCCC
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Coding sequence (CDS) from alignment at H-elongata_contig5239:1584..5500+

>mRNA_H-elongata_contig5239.12547.1 ID=mRNA_H-elongata_contig5239.12547.1|Name=mRNA_H-elongata_contig5239.12547.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3078bp|location=Sequence derived from alignment at H-elongata_contig5239:1584..5500+ (Himanthalia elongata Himel1 dioecious)
GGTCAAATTGCAGCCGCTACTAAAATTGGTTCGAATAGTGCTACAAACGG
CGTGAGTATACGAAAGCCATCAGCAACTCTGGCGTTCGTCGTGGTATCTC
AGTTACAGTTTCTCGGTACGCTATCGCTGGTTGATTACACCCAAGGGGCG
CCCTTTGAAAGGTTTCGTGGAAAGGTCAAATTGCAGCCGCTACTAAAATT
GGTTCGAATAGTGCTACAAACGGCGTGAGTATACGAAAGCCATCAGCAAC
TCTGGCGTTCGTCGTGGTATCTCAGTTACAGTTTCTCGGTACGCTATCGC
TGGTTGATTACACCCAAGGGGCGCCCTTTGAAAGGTTTCGTGGAAAGTTA
ATAAATATGTGGTGGCCACTACCGTCATCAAGGTTTGTTAAAGATATGAC
GGCTTGCACAATCACAAGTGCTGAGGAGGGCAATAGCATCGTAGAGTTCG
CTGGGAATTTGGCCCTCTTCGCCGGGCTCCTCCTTTGCATCTTTTTGATC
CACGTGGCAGTTGCATCCGGCATAGAGGCGTACATGATGCTTAAGAGGAG
AGCACTAAGTGAAATCAAGGCAGCCCAAGACGAAGGAATTTCCATACGCG
AATTATCTTCGAGGAAGCTACGTGGAAAAAAACAAGAACGACCGCCACCA
CTCCTCGATGTTCAAAATACTCAAGTTAACGGGAATACGATGGGCCTTAG
ACAGAAGCATGGCAGGAAAAGGGGCATCGGGGAAGAAATCATCGAGTGTC
GGGATAAGTCGAGCTCCATTTGGCTTCATTTTCCCCATCTCGAGCTCGTT
TTCCTCTTTTTTGCATTTCAAGGGGTCGTGGCTTCACACACGCGAGTTAT
TCGCTTCACAGGGCTCAATTGCTCACCCGTGTCCTTCTCAGCCGTAATGG
TTTTGGTTAATAAATATGTGGTGGCCACTACCGTCATCAAGGTTTGTTAA
AGATATGACGGCTTGCACAATCACAAGTGCTGAGGAGGGCAATAGCATCG
TAGAGTTCGCTGGGAATTTGGCCCTCTTCGCCGGGCTCCTCCTTTGCATC
TTTTTGATCCACGTGGCAGTTGCATCCGGCATAGAGGCGTACATGATGCT
TAAGAGGAGAGCACTAAGTGAAATCAAGGCAGCCCAAGACGAAGGAATTT
CCATACGCGAATTATCTTCGAGGAAGCTACGTGGAAAAAAACAAGAACGA
CCGCCACCACTCCTCGATGTTCAAAATACTCAAGTTAACGGGAATACGAT
GGGCCTTAGACAGAAGCATGGCAGGAAAAGGGGCATCGGGGAAGAAATCA
TCGAGTGTCGGGATAAGTCGAGCTCCATTTGGCTTCATTTTCCCCATCTC
GAGCTCGTTTTCCTCTTTTTTGCATTTCAAGGGGTCGTGGCTTCACACAC
GCGAGTTATTCGCTTCACAGGGCTCAATTGCTCACCCGTGTCCTTCTCAG
CCGTAATGGTTTTGGCTCTTTATCCCTTGCTTATGGTCTTCATGATCTCG
CGAACAATCTTCGTCCGAGTGCTTCCTGATTCAATCATCGAGTTCCGATA
TTTTCCCTCGGGATACGGTCATTGTAGCAGCTGGTTGTCGAAAGTTCGAA
AGGGTTGGGAGGAGGAAGGGAGCTTGCTCTCGTGGGCAAACCGAGGACGA
TGGCAAACGACGGAAACGACCAATGAAGAGACATATCGACAGGGAAATTG
GTTCCGCATTGGATTCGAACCGCTGTTCGTCGACTTCACCAAGTCGGGAA
CATGGTTTGTCATTATTTCCCTGCTCGAGGCTCTTTATCCCTTGCTTATG
GTCTTCATGATCTCGCGAACAATCTTCGTCCGAGTGCTTCCTGATTCAAT
CATCGAGTTCCGATATTTTCCCTCGGGATACGGTCATTGTAGCAGCTGGT
TGTCGAAAGTTCGAAAGGGTTGGGAGGAGGAAGGGAGCTTGCTCTCGTGG
GCAAACCGAGGACGATGGCAAACGACGGAAACGACCAATGAAGAGACATA
TCGACAGGGAAATTGGTTCCGCATTGGATTCGAACCGCTGTTCGTCGACT
TCACCAAGTCGGGAACATGGTTTGTCATTATTTCCCTGCTCGAGTCTGCA
GCACTTGCATGTGTGGGGGTCCTGACTGAAGAAAGTTCGTGGCAGCTTTT
TATGTTTTGCATCATACACATTATGTCCTTCTCGGTGCTGGTCGTGCTGA
AGCCCTTTGCCAACACTCTGCAGCACTTGCATGTGTGGGGGTCCTGACTG
AAGAAAGTTCGTGGCAGCTTTTTATGTTTTGCATCATACACATTATGTCC
TTCTCGGTGCTGGTCGTGCTGAAGCCCTTTGCCAACACGATTATCAATTG
CATGGCGGTGATAGTAGAAGGGGCGGACGCTCTAAGCACTGGGTTAACGG
CCTTGTCGGAGAGCACCGCGATAAGCTTCTCGAGCTCGAACACGATCCAG
TCAGCGGTCGTGTGTATTCATATAGTGGTTCTCGCTGGATTATCAATTGC
ATGGCGGTGATAGTAGAAGGGGCGGACGCTCTAAGCACTGGGTTAACGGC
CTTGTCGGAGAGCACCGCGATAAGCTTCTCGAGCTCGAACACGATCCAGT
CAGCGGTCGTGTGTATTCATATAGTGGTTCTCGCTGTGTCGGTTATTCCA
ATCTATGTTGACACTGCCGCCGGGGTGATAGATGGCTTCAGGAGGAAAAT
TCAGAATACCCATAATAAAGTAAACCACGACGAAAAAGAGTGTCGGTTAT
TCCAATCTATGTTGACACTGCCGCCGGGGTGATAGATGGCTTCAGGAGGA
AAATTCAGAATACCCATAATAAAGTAAACCACGACGAAAAAGAGATTGAA
ACTTTCATCCGTCAGTATATGCGAGCGAGGTGGGTTCGCATATGGTGCAC
GACATTCTCCTTCAACATATTTTCTTGTGCGAAAGACACCCGCGAAGGAG
TCCGTAAGCCCATTGAAACTTTCATCCGTCAGTATATGCGAGCGAGGTGG
GTTCGCATATGGTGCACGACATTCTCCTTCAACATATTTTCTTGTGCGAA
AGACACCCGCGAAGGAGTCCGTAAGCCC
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