mRNA_H-elongata_contig52287.12534.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig52287.12534.1
Unique NamemRNA_H-elongata_contig52287.12534.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig52287.12534.1 vs. uniprot
Match: A0A6H5L981_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L981_9PHAE)

HSP 1 Score: 395 bits (1014), Expect = 9.210e-128
Identity = 221/286 (77.27%), Postives = 239/286 (83.57%), Query Frame = 1
Query:    1 QNNQAAADLKETVSGRYGGVGLVISGGKQPQPQPQEESQLLPKKANPGTGGRGVGGSKGKVDKPGAKKGKMG---DRVLSRDGITVVSAFEGYAFDAGMRAGDRITAINGQPVAGISVDKARDLLRGEPNSKVSISFIRDDKN-QNEQEITLTRRLVKLRDVKLATLVGDTKNAPVGYLELSGFSTGAAQELGQAYRYLDSIAEGGLRGVILDLRGNPGGLLEGAVDVSALFVPQGSNIVSIKGRNFQDITYGSSNGPVRPASTPLVVLTNGGTASAAEIVSGAVQ 846
            QNNQAAADLKETVSGRYGGVGLVISGGKQ     + E Q     A    GG+  GG + + +  G  +G +G   +R   +DGITVVSAFEGYAFDAGMRAGDRITAING+PV GI+V+KARD LRGEPNSKVSISF+RD  N Q EQEITLTRRLVKLRDVKLA LVGD KNAPVGY++LSGFS GAAQEL QAYRYLDS AEGGLRGVILD+RGNPGGLLE AVDVSALFVP GS IVSIKGRNFQD+TYGSS GPVRPASTPLVVLTNGGTASAAEIV+GAVQ
Sbjct:  340 QNNQAAADLKETVSGRYGGVGLVISGGKQ-----RGERQQATGDAESPKGGQTSGGDRVQKEGGGKGRGTIGRGANREAGKDGITVVSAFEGYAFDAGMRAGDRITAINGKPVEGITVEKARDELRGEPNSKVSISFLRDTSNGQTEQEITLTRRLVKLRDVKLAALVGDVKNAPVGYMQLSGFSMGAAQELQQAYRYLDSAAEGGLRGVILDMRGNPGGLLEAAVDVSALFVPDGSRIVSIKGRNFQDVTYGSSQGPVRPASTPLVVLTNGGTASAAEIVAGAVQ 620          
BLAST of mRNA_H-elongata_contig52287.12534.1 vs. uniprot
Match: A0A835Z050_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z050_9STRA)

HSP 1 Score: 227 bits (579), Expect = 1.480e-65
Identity = 139/288 (48.26%), Postives = 181/288 (62.85%), Query Frame = 1
Query:    1 QNNQAAADLKETVSGRYGGVGLVISGGKQPQPQPQEESQLLPKKANPGTGGRGVGGSKGKVDKPGAKKGKMGDRVLSRDGITVVSAFEGYAFDAGMRAGDRITAINGQPVAGISVDKARDLLRGEPNSKVSISFIRDDKNQNEQ------EITLTRRLVKLRDVKLATLVGDTKNAPVGYLELSGFSTGAAQELGQAYRYLDSIAEGGLRGVILDLRGNPGGLLEGAVDVSALFVPQGSNIVSIKGRNFQDITYGSSNGPVRPASTPLVVLTNGGTASAAEIVSGAVQ 846
            +N + A  L+E+VSG+YGGVGLVISG          E++L  ++ N                       + G    +R+ I VVSAFEGYAFDAGMR GD + ++ G  + G++VD  RDLLRG P+++V + F R+  N + +      E+ L RR+VK+ DVKLATLVG   +  VGY++LSGFS  A ++L  A   LD  A  GL G+ILDLRGNPGGLLE AV+VSA  VPQGS+IV  KGR F +  Y S++ P+R A  PL +LTN GTASAAEIVSGA+Q
Sbjct:  175 ENKEDAVTLQESVSGKYGGVGLVISG----------ETKLAQQERN-----------------------RSGRNQPNRN-IQVVSAFEGYAFDAGMRPGDTLVSVGGTSIEGLTVDSVRDLLRGSPDTEVPVRFTREGVNLDGKGVPQPLEVILKRRMVKVSDVKLATLVGSPADG-VGYVQLSGFSPSAGKDLAAALHALDMTAPKGLSGLILDLRGNPGGLLESAVEVSAALVPQGSDIVFAKGRAFGEAKYKSASAPLRRAEVPLAILTNSGTASAAEIVSGAIQ 427          
BLAST of mRNA_H-elongata_contig52287.12534.1 vs. uniprot
Match: A0A7S3XNJ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNJ2_HETAK)

HSP 1 Score: 215 bits (548), Expect = 5.930e-61
Identity = 135/290 (46.55%), Postives = 173/290 (59.66%), Query Frame = 1
Query:    1 QNNQAAADLKETVSGRYGGVGLVISGGKQPQPQPQEESQLLPKKANPGTGGRGVGGSKGKVDKPGAKKGKMGDRVLSRDGITVVSAFEGYAFDAGMRAGDRITAINGQPVAGISVDKARDLLRGEPNSKVSISFIRDDKNQNEQEITLTRRLVKLRDVKLATL----VGDTKNAPVGYLELSGFSTGAAQELGQAYRYLDSIAEGG----LRGVILDLRGNPGGLLEGAVDVSALFVPQGSNIVSIKGRNFQDITYGSSNGPVRPASTPLVVLTNGGTASAAEIVSGAVQ 846
            +N     DL+E V GRYGGVGLVI+G                        GR    + G    P         +V   + +TVV AFEGYAFDAG+R GDR+  + GQ V G +V++ +DLLRG P + V++ F R  + +   E+ L RR V++ DVK  TL    V    + PVGY+ L GFS GA +E+  AYR L   A+      LRGV+LDLRGNPGGLL+ AVDV++L VP+ S +VS+KGRNF +  + S+  PVRP S PLVVL +GGTASAAEIVSGAVQ
Sbjct:  211 ENEAQNQDLQEMVKGRYGGVGLVIAGQT--------------------AAGREAMAASGDDQDPA--------KVARAERVTVVDAFEGYAFDAGLRVGDRLLRVGGQDVRGKTVEQVKDLLRGPPGTSVAVEFERAGRRE-PAEVVLPRRQVRVPDVKCFTLLDPKVVGAPDFPVGYISLKGFSAGAGREVELAYRVLTERAQAAGASRLRGVVLDLRGNPGGLLDSAVDVASLLVPRDSTLVSVKGRNFPETGFVSTGDPVRPLSQPLVVLVDGGTASAAEIVSGAVQ 471          
BLAST of mRNA_H-elongata_contig52287.12534.1 vs. uniprot
Match: A0A0G4EX77_VITBC (PDZ domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EX77_VITBC)

HSP 1 Score: 207 bits (526), Expect = 6.240e-58
Identity = 133/315 (42.22%), Postives = 193/315 (61.27%), Query Frame = 1
Query:    1 QNNQAAADLKETVSGRYGGVGLVISGGKQPQPQ-----------------PQEES---------------QLLPKKANPGTGGRGVGGSKGKVDKPGAKKGKMGDRVLSRDGITVVSAFEGYAFDAGMRAGDRITAINGQPVAGISVDKARDLLRGEPNSKVSISFIRDDKNQNEQEITLTRRLVKLRDVKLATLVGDTKNAPVGYLELSGFSTGAAQELGQAYRYLDSIA-EGGLRGVILDLRGNPGGLLEGAVDVSALFVPQGSNIVSIKGRNFQDITYGSSNGPVRPASTPLVVLTNGGTASAAEIVSGAVQ 846
            +N QAA+DL+E V+GRYGGVGLVI+  + P  +                 P+++S               + +P++  P         S  +   P +++     R     GI V+ AFEGYAFDAGMR GD +  + G+PVA +S ++ +++LRG P+S+V+++FIRD  +   Q +TLTRRLV++ +VKL   +G +++  +GY++LSGFS  +  E+  A R+L   A   GL GV+L+LRGNPGGLL  AVD+++LFVP+GS IVS +GR+F  + Y S+  PV   S  LV+LTN  TASAAEIVSGA+Q
Sbjct:   58 ENLQAASDLRENVAGRYGGVGLVIAVDRNPPQRVIDTATKEIDLILEAEKPKDDSIGPMASTLRPFTASAEPIPQRIAPSPSPP----SPSQPTSP-SQRASFPQRGKDPTGIIVMGAFEGYAFDAGMRVGDHLVEVEGRPVANLSPEEVKNMLRGPPDSQVNVAFIRDGVD-GLQSVTLTRRLVRVPNVKLFQYLG-SRDDGIGYIQLSGFSASSFAEMRVALRWLQQNAPRAGLDGVVLNLRGNPGGLLNSAVDIASLFVPKGSEIVSAQGRSFVRVAYKSTTEPVLDPSVKLVLLTNEATASAAEIVSGAIQ 365          
BLAST of mRNA_H-elongata_contig52287.12534.1 vs. uniprot
Match: A0A0G4F0N3_VITBC (PDZ domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F0N3_VITBC)

HSP 1 Score: 207 bits (526), Expect = 3.480e-57
Identity = 134/310 (43.23%), Postives = 188/310 (60.65%), Query Frame = 1
Query:    1 QNNQAAADLKETVSGRYGGVGLVISGGKQPQPQ----PQEESQLLPKKANPGTGGRGVGGSKGKVDKPGAK-----------------------KGKMGDRVLSRDGITVVSAFEGYAFDAGMRAGDRITAINGQPVAGISVDKARDLLRGEPNSKVSISFIRDDKNQNEQEITLTRRLVKLRDVKLATLVGDTKNAPVGYLELSGFSTGAAQELGQAYRYLDSIA-EGGLRGVILDLRGNPGGLLEGAVDVSALFVPQGSNIVSIKGRNFQDITYGSSNGPVRPASTPLVVLTNGGTASAAEIVSGAVQ 846
            +N QAA+DL+E V+GRYGGVGLVI+  + P  +      +E  L+ +   P     G   S  +     A+                       +     R     GI V+ AFEGYAFDAGMR GD +  + G+PVA +S ++ +++LRG P+S+V+++FIRD  +   Q +TLTRRLV++ +VKL   +G +++  +GY++LSGFS  +  E+  A R+L   A   GL GV+LDLRGNPGGLL  AVD+++LFVP+GS IVS +GR+F  + Y S+  PV   S  LV+LTN  TASAAEIVSGA+Q
Sbjct:  274 ENLQAASDLRENVAGRYGGVGLVIAVDRNPPQRVIDTATKEIDLILEAEKPKADSIGPMASTLRPFTASAEPIPQRIAPSPSPXXXXXPTSPSQRTSFPQRGKDPTGIIVMGAFEGYAFDAGMRVGDHLVEVEGRPVANLSPEEVKNMLRGPPDSQVNVAFIRDGVD-GLQSVTLTRRLVRVPNVKLFQYLG-SRDDGIGYIQLSGFSASSFAEMRVALRWLQQNAPRAGLDGVVLDLRGNPGGLLNSAVDIASLFVPKGSEIVSAQGRSFVRVAYKSTTEPVLDPSVKLVLLTNEATASAAEIVSGAIQ 581          
BLAST of mRNA_H-elongata_contig52287.12534.1 vs. uniprot
Match: I2CP28_NANGC (Carboxyl-terminal protease (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP28_NANGC)

HSP 1 Score: 200 bits (508), Expect = 3.960e-57
Identity = 118/207 (57.00%), Postives = 144/207 (69.57%), Query Frame = 1
Query:  232 RDGITVVSAFEGYAFDAGMRAGDRITAINGQPVAGISVDKARDLLRGEPNSKVSISFIRDD-KNQNEQEITLTRRLVKLRDVKLATLVGDTKNAPVGYLELSGFSTGAAQELGQAYRYLDSIAEGGLRGVILDLRGNPGGLLEGAVDVSALFVPQGSNIVSIKGRNFQDITYGSSNGPVR-PASTPLVVLTNGGTASAAEIVSGAVQ 846
            R+GITVVSAFEGYAFDAGMR GD + A++  PV G SVD+ RDLLRG PN++V + F R       +QE+ LTRRLV++ DVKL + +G  ++  +GY++LSGFS  A  E   A   L   A  GL+G+ILDLR NPGGLL  AVDV+++ VP  S IVS KGR F  + Y SS  PVR PA+ PL VL N  TASAAEIVSGAVQ
Sbjct:   19 REGITVVSAFEGYAFDAGMRVGDSLEAVDDVPVKGRSVDQVRDLLRGPPNTQVKVRFTRAGLPGPTQQELLLTRRLVRVPDVKLTSFLGPLRDG-IGYIQLSGFSQNAPAEFRFALELLRLHAPQGLQGLILDLRNNPGGLLTSAVDVASMLVPADSAIVSAKGRAFPPVAYSSSLAPVRDPATLPLAVLVNENTASAAEIVSGAVQ 224          
BLAST of mRNA_H-elongata_contig52287.12534.1 vs. uniprot
Match: B7GBC3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GBC3_PHATC)

HSP 1 Score: 204 bits (519), Expect = 1.370e-56
Identity = 132/298 (44.30%), Postives = 186/298 (62.42%), Query Frame = 1
Query:   10 QAAADLKETVSGRYGGVGLVISGGKQPQPQPQEES-QLLPKKANPGTGGR-----------GVGGSKGKVDKPGAKKGKMGDRVLSRDGITVVSAFEGYAFDAGMRAGDRITAINGQPV-AGISVDKARDLLRGEPNSKVSISFIRDDKNQNEQEITLTRRLVKLRDVKLATLVGDTKNAPVGYLELSGFSTGAAQELGQAYRYLD------SIAEGGLRGVILDLRGNPGGLLEGAVDVSALFVPQGSNIVSIKGRNFQDITYGSSNGPVRPASTPLVVLTNGGTASAAEIVSGAVQ 846
            Q A  L E++ GRYGGVGLVI+G  +   +P+  + QLLP  A   T  +            V   + + +    K+ +       + GI VV+AFEGYAFD G+R GD++ AI+ +P+ A  +V+  R++LRG+P + VSI F RD  + + Q +T+ R +V+LRDVKLATLVG  ++  +GY++LSGF++ A  E+ QA  YL       +  +  L+G++LDLRGNPGGLL  AVDV++L VP GS+IVS +GR F  + Y S   P+   +T L VL NG TASAAEIV+GAVQ
Sbjct:  260 QEAVALTESIEGRYGGVGLVIAGTPRAAAEPKSNANQLLPAAAQSDTASQEDTERNRNTMSNVMTEEEEDEYMDRKEQRKALEKARKQGIRVVTAFEGYAFDYGLRVGDKLLAIDDKPLTADTTVEDVRNMLRGQPGTLVSIEFNRDGVD-DVQTVTMPRAVVRLRDVKLATLVGSPRDG-IGYIQLSGFTSNAGAEMRQAITYLQQRTLDATNGDKSLQGLVLDLRGNPGGLLTSAVDVASLLVPNGSDIVSARGRGFPGMLYRSRVDPILNPNTKLAVLVNGQTASAAEIVAGAVQ 555          
BLAST of mRNA_H-elongata_contig52287.12534.1 vs. uniprot
Match: A0A7S4IQW6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IQW6_9STRA)

HSP 1 Score: 202 bits (514), Expect = 9.420e-56
Identity = 140/327 (42.81%), Postives = 185/327 (56.57%), Query Frame = 1
Query:    1 QNNQAAADLKETVSGRYGGVGLVISGGKQPQPQPQEESQLLPKKANPGTGGRGVGGSKGKVD---KPGAKKGKMGDRVLS-----------------------------------RDGITVVSAFEGYAFDAGMRAGDRITAINGQPVAG-ISVDKARDLLRGEPNSKVSISFIRDDKNQNEQEITLTRRLVKLRDVKLATLVGDTKNAPVGYLELSGFSTGAAQELGQAYRYLDSIAE------GGLRGVILDLRGNPGGLLEGAVDVSALFVPQGSNIVSIKGRNFQDITYGSSNGPVRPASTPLVVLTNGGTASAAEIVSGAVQ 846
            +    A +L E+V GRYGGVGLVIS    P  Q Q   + +P  A  G GG      +  +D   +P A  G +  R  S                                   + GI VVSAFEGYA+D GMR GDR+ AI+GQ +   ++ +  R+ LRGEP + V ++F+RD   + E  ++L R LVK+RDVKLAT VGD ++  VGY+++SGF+    +EL  A   L  +AE       GLRG++LDLRGNPGGLL  AVDV++L VP+GS+IVS +GR F  + Y S   P+   +T L VL NG TASAAEIVSGA+Q
Sbjct:  265 EGKSEAVELNESVQGRYGGVGLVISSAT-PVRQ-QAAPKQIPTPATSGEGGGNKLLPQEALDDNARPDANDGDITSRTDSPVADSLDDDGDXXXXXXDATMEERMAEKKAVAKARKQGIRVVSAFEGYAYDYGMRVGDRLMAIDGQLLTPTMTAEDVRNKLRGEPGTSVEVTFVRDGV-EGENTVSLPRTLVKMRDVKLATFVGDPRDG-VGYVQVSGFAAETGRELRNAILALQRVAEDTSGGEAGLRGLVLDLRGNPGGLLTSAVDVASLVVPKGSDIVSARGRGFPSVLYRSRVDPILDPATKLAVLVNGQTASAAEIVSGAIQ 587          
BLAST of mRNA_H-elongata_contig52287.12534.1 vs. uniprot
Match: A0A7S4QMK2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QMK2_9STRA)

HSP 1 Score: 190 bits (483), Expect = 7.700e-53
Identity = 139/320 (43.44%), Postives = 184/320 (57.50%), Query Frame = 1
Query:   16 AADLKETVSGRYGGVGLVISGG--KQPQPQPQEE---------------SQLLPKKANPGTGGRGVGGSKGKVDKPGAKKGKMG-DRVLSRD------------------GITVVSAFEGYAFDAGMRAGDRITAINGQPVAG-ISVDKARDLLRGEPNSKVSISFIRDDKNQNEQEITLTRRLVKLRDVKLATLVGDTKNAPVGYLELSGFSTGAAQELGQAYRYLDSIAE---GG---LRGVILDLRGNPGGLLEGAVDVSALFVPQGSNIVSIKGRNFQDITYGSSNGPVRPASTPLVVLTNGGTASAAEIVSGAVQ 846
            A  + ETVSGRY GVGLVISG   +     P ++               S+LLPK A      + +   +   DK    +  +  D +L+ D                  GI VVSAFEGYAFD GMR GD+I AI+G+P+    SV+  R++LRG P + V ++F+RD   + E  ++L R+ V++ DVKLA LVGD K   +GY+ L+GF+  A  E+  +   L  +AE   GG   L+G++LDLRGNPGGLL  AVDV++L VP+GS+IVS +GR F  + Y S   PV    T LVVL N  TASAAEIVSGAVQ
Sbjct:  259 AEAMTETVSGRYAGVGLVISGATLRDGIDIPDDDLTDVAIGGESTNEGGSKLLPKDAL--NDQKRLNQKESLDDKTPVTRNDIDKDDLLAEDEKEERLNKRRAMARVKDQGIRVVSAFEGYAFDYGMRVGDKIVAIDGKPITDKTSVEDVRNMLRGTPQTTVDVTFLRDGV-EGENTVSLPRQTVRIPDVKLAALVGDPKEG-MGYISLTGFAANAGLEVRNSIIGLQRLAENASGGERSLQGLVLDLRGNPGGLLTSAVDVASLLVPKGSDIVSARGRGFPGVVYRSQVDPVLDPQTKLVVLVNSQTASAAEIVSGAVQ 574          
BLAST of mRNA_H-elongata_contig52287.12534.1 vs. uniprot
Match: A0A7S1YXK9_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YXK9_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.670e-51
Identity = 139/320 (43.44%), Postives = 184/320 (57.50%), Query Frame = 1
Query:   16 AADLKETVSGRYGGVGLVISGG--KQPQPQPQEE---------------SQLLPKKANPGTGGRGVGGSKGKVDKPGAKKGKMG-DRVLSRD------------------GITVVSAFEGYAFDAGMRAGDRITAINGQPVAG-ISVDKARDLLRGEPNSKVSISFIRDDKNQNEQEITLTRRLVKLRDVKLATLVGDTKNAPVGYLELSGFSTGAAQELGQAYRYLDSIAE---GG---LRGVILDLRGNPGGLLEGAVDVSALFVPQGSNIVSIKGRNFQDITYGSSNGPVRPASTPLVVLTNGGTASAAEIVSGAVQ 846
            A  + ETVSGRY GVGLVISG   +     P ++               S+LLPK A      + +   +   DK    +  +  D +L+ D                  GI VVSAFEGYAFD GMR GD+I AI+G+P+    SV+  R++LRG P + V ++F+RD   + E  ++L R+ V++ DVKLA LVGD K   +GY+ L+GF+  A  E+  +   L  +AE   GG   L+G++LDLRGNPGGLL  AVDV++L VP+GS+IVS +GR F  + Y S   PV    T LVVL N  TASAAEIVSGAVQ
Sbjct:  259 AEAMTETVSGRYAGVGLVISGATLRDGIDIPDDDLTDVAIGGESTNEGGSKLLPKDAL--NDQKRLNQKESLDDKTPVTRNDIDKDDLLAEDEKEERLNKRRAMARVKDQGIRVVSAFEGYAFDYGMRVGDKIVAIDGKPITDKTSVEDVRNMLRGTPQTTVDVTFLRDGV-EGENTVSLPRQTVRIPDVKLAALVGDPKEG-MGYISLTGFAANAGLEVRNSIIGLQRLAENASGGERSLQGLVLDLRGNPGGLLTSAVDVASLLVPKGSDIVSARGRGFPGVVYRSQVDPVLDPQTKLVVLVNSQTASAAEIVSGAVQ 574          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52287.12534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L981_9PHAE9.210e-12877.27PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z050_9STRA1.480e-6548.26ClpP/crotonase-like domain-containing protein n=1 ... [more]
A0A7S3XNJ2_HETAK5.930e-6146.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4EX77_VITBC6.240e-5842.22PDZ domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A0G4F0N3_VITBC3.480e-5743.23PDZ domain-containing protein n=3 Tax=Vitrella bra... [more]
I2CP28_NANGC3.960e-5757.00Carboxyl-terminal protease (Fragment) n=1 Tax=Nann... [more]
B7GBC3_PHATC1.370e-5644.30Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S4IQW6_9STRA9.420e-5642.81Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4QMK2_9STRA7.700e-5343.44Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S1YXK9_9STRA1.670e-5143.44Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52287contigH-elongata_contig52287:142..3554 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score399.8
Seed ortholog evalue1e-108
Seed eggNOG ortholog2880.D7FJW2
EggNOG free text desc.Peptidase family S41
EggNOG OGs2RW0A@2759,COG0793@1
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size846
Cds size846
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52287.12534.1prot_H-elongata_contig52287.12534.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig52287 142..3554 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930855.3505254-CDS-H-elongata_contig52287:141..3441622930855.3505254-CDS-H-elongata_contig52287:141..344Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52287 142..344 -
1691679599.248239-CDS-H-elongata_contig52287:141..3441691679599.248239-CDS-H-elongata_contig52287:141..344Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52287 142..344 -
1622930855.3757212-CDS-H-elongata_contig52287:1023..12341622930855.3757212-CDS-H-elongata_contig52287:1023..1234Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52287 1024..1234 -
1691679599.267023-CDS-H-elongata_contig52287:1023..12341691679599.267023-CDS-H-elongata_contig52287:1023..1234Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52287 1024..1234 -
1622930855.395805-CDS-H-elongata_contig52287:1406..14871622930855.395805-CDS-H-elongata_contig52287:1406..1487Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52287 1407..1487 -
1691679599.279584-CDS-H-elongata_contig52287:1406..14871691679599.279584-CDS-H-elongata_contig52287:1406..1487Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52287 1407..1487 -
1622930855.417127-CDS-H-elongata_contig52287:2155..23651622930855.417127-CDS-H-elongata_contig52287:2155..2365Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52287 2156..2365 -
1691679599.287716-CDS-H-elongata_contig52287:2155..23651691679599.287716-CDS-H-elongata_contig52287:2155..2365Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52287 2156..2365 -
1622930855.438738-CDS-H-elongata_contig52287:3413..35541622930855.438738-CDS-H-elongata_contig52287:3413..3554Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52287 3414..3554 -
1691679599.2958996-CDS-H-elongata_contig52287:3413..35541691679599.2958996-CDS-H-elongata_contig52287:3413..3554Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52287 3414..3554 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig52287.12534.1

>prot_H-elongata_contig52287.12534.1 ID=prot_H-elongata_contig52287.12534.1|Name=mRNA_H-elongata_contig52287.12534.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=282bp
QNNQAAADLKETVSGRYGGVGLVISGGKQPQPQPQEESQLLPKKANPGTG
GRGVGGSKGKVDKPGAKKGKMGDRVLSRDGITVVSAFEGYAFDAGMRAGD
RITAINGQPVAGISVDKARDLLRGEPNSKVSISFIRDDKNQNEQEITLTR
RLVKLRDVKLATLVGDTKNAPVGYLELSGFSTGAAQELGQAYRYLDSIAE
GGLRGVILDLRGNPGGLLEGAVDVSALFVPQGSNIVSIKGRNFQDITYGS
SNGPVRPASTPLVVLTNGGTASAAEIVSGAVQ
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mRNA from alignment at H-elongata_contig52287:142..3554-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig52287.12534.1 ID=mRNA_H-elongata_contig52287.12534.1|Name=mRNA_H-elongata_contig52287.12534.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3413bp|location=Sequence derived from alignment at H-elongata_contig52287:142..3554- (Himanthalia elongata Himel1 dioecious)
CAGAACAACCAAGCGGCGGCTGATCTAAAGGAAACCGTGTCAGGGAGATA TGGTGGGGTTGGCTTGGTGATCTCGGGGGGTAAGCAACCACAGCCGCAGC CGCAGGAAGAATCGCAGTTGCTGCCGAAAAAGGCCAATCCTGTCAGGAGC GATTCGATCGGTGAGATGTGGATAACTCTTGTAAGTCACACGCACTAAGC CCTGACTAAGCCAAAGTTGGGTTTCCAATACTTGTATGGCGTGCCGTTAC AGGATGCACACGGACGTGATGACGTGGTTTCGGAGAAGCTCTTCCCCGGC GGGTCTCACGCCCTTTTTACAAGGCTCAATTATCGCGCGTTAAATCGCTT CGGGGAGATATTAGGGAAAGTCCTTTGGAAACGTACAGAAACGTTCTGGG TGTCGTGGCCGCTCATCGCCTTGATGCAACCTTTTTCATATTCACTCTTC AGACGGTCACCGTTCGCCGCCAAACAATCCCCATCCGTTTGCCGCTTTTT CCCTTTGCACCGTCGTGCTCGATGTGGGTGTGCCACGAGTAGAACATTAC AGATTGGAGATTGGATAGTAGGCTATTATAAATGGCGAGTGTCGTCTGAG TGTGTACGATGGAGAACTCTTGTTTATAGCCCCGGTGGAAACTCTAGCCG TGCGCGGCGGGATAGACTCTCCTCGCGTTGAATGAGGCGATGAAGCCATG GAGCTACGAATCCCTCGTACAGTAGTCCTGTGAAAGCGCCATATTATTTA TCGCTCGAGGCCTCTGCCCAAAGGAATTGTACAAGACGAGTAGGCGTTTC TCCTCCCGTGGATGACAAAAAAAAAGACCTTGGGGCAAATTACGTAAAAA TTCCTTTTCATGGTTTGCCTACAAAAAATAAATAGGGCATATATAAGAAT ATGTGTCTTGGGTAATCAGCCAAGATCGGAAATTGCGATTTCCTCGCTCC ACAAAATCGAGAATATTGGGAATCGGAAATCGCGATTGTCCCGACCCCCT TTTTATTCCTGATTTTGCTTCCGCATAAGAGTCGAACTTAAAACCAAAAT ATGGTGATTCGTATGCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCACTC ACTCTTTTAATATATTTAATTAACGGGGGTTTCCACGCGATGAGCCTCCA GGAGGCCGGGGGCGAGGCGGGGAGGATGCCGGTTTAGAGGGTACCGGCGG GCGCGGCGTGGGTGGATCAAAGGGCAAGGTAGACAAGCCCGGCGCAAAGA AGGGGAAGATGGGCGATCGAGTGCTGAGCCGCGACGGCATCACGGTGGTG TCTGCGTTTGAGGGGTACGCGTTCGACGCCGGCATGCGCGCCGGGGATCG AATAACGGCGATCAACGGCCAGCCCGTGGCCGGCATCTCGGTGGATAAGG TAAGATACATGTGTGAAGTGTAGTGTAAAGTAGTATGGTGTACAGTATAG AGTACAGTATAGAGGAGTGAAGTATAGTGTTATAGAGTAATGTACTGTAT TGTACTGTACTTTAGTATACCCTATTATGAATAATAGTCTAGTGGGGGGT TTAGTGTGAAGTATAGTGTTTTAGAGTAGTGTGTGTCGTGTAGTGCGTGT GATGTAGTCAAAGTATGGTATGTGTTGTGTAGTAGAGCCTATATTATAGT GTAGTGTTGTGTGTAGTGAGGCATGATGTCGTATAGTGTATGTAATTTAG TGTATAGTATTGTGTTTTCTTATAGTATTAGTATAATATCGTATAGTCTA GCGTAGAGTATAGCTGTACTATACTATACTATACTATACTGTACTATATT ATACTATACTATACTATACCGTAGTAGATTGGCTCAGGATCTTTTTTTGG TACCAAGCTTTGCGATTGCCCTGGATCCTTTAAAATCAAGTGATTACACC TCTGAGACTGAGCTCCAAGCACACACGCGTACACTAGTTTGGGGAATTTC TTGTTTTTGATACACTTGATACACTTAAAGCCTTCACAATCGAGTGATTG ACGTACGCGTCTCGTCTCGGGGCTAGGTTCACCCCCTGCCTCCGACGAAA CGGTTTTTTTTTGGCAGGCTCGAGATCTCTTGAGGGGCGAGCCTAACTCC AAGGTCAGCATTTCCTTCATCAGAGACGACAAGAATCAAAACGAACAGGT GATATAACAGGATGGAAATGTTCGGAGGGTGGAAATGAGTTCATAGGGTT TTATGAAAAATGTGGCGTTACAGACAAGTACACACACACGTACACAAATA CACAGCAAATATTTACACACATACACAAATACATACCAAAATAGATTTTG CGTCCTATAATCCGTGTCAGGAGATCACCCTTACGAGGAGGCTGGTAAAG CTCCGCGATGTAAAGCTGGCAACGCTAGTCGGCGATACGAAAAACGCCCC CGTAGGCTACCTGGAACTCTCCGGATTCAGCACGGGTGCGGCGCAAGAGC TGGGGCAGGCGTATCGGTACCTTGATTCCATCGCCGAGGGAGGGCTGAGG GGCGTCATCCTAGACCTCCGTGGCAATCCCGGTGCGATTGGGGGAAGATA TAATGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTATTAATTGGCA TATAACCGCGCAATCCGGCCGCGATGCTTCCATCCCCTTCTCCCCCCTCT AATTCACGCCTTCCATCCCCTCCTCCCCCCTCTAGTTCACACCTTCCATC CCTTCCCATTTTTCAACACTAATAGAGTTCAGCAGTTTCACTCTTGCAGC TTGTCAGCCTTCCATAAAACATAAAACCTACTATGGTTGAACTTTGGTCT CAAGCTTTCACGTCTATAGCTAACAGAATCAACACTACTGTACACCACTA TATACTGATTTACAATGTACACCACCATATACTGATTTACAATGTGGTTA CCAACTACCGTACAGTAGACTGTTCGGAACGCGTGACGCACCCTACTATG TTGCTCTTAAAAGCGCCTTCGGAATAGACCCAAACACCCATTTTCTCGCG GGAGGCGTTTGACCTCACCTTTCCCCTACCCCCTTTTCCACCACGCCATT TTCCCCCTCCACTCGTTGAGGACGCTATATATTTGAAATGACGAAATATA TACTGCGGCACAAGTTTTGCGTCAAATATTTTAAAGTATGTCTTGTGAGC ACAGGGAACCTTCTCTCCCGTCCCCTCTCACACCCCCCCCGCAAAAAAAT ACCGCTGCAGGCGGGCTGCTCGAGGGGGCCGTGGATGTTTCTGCGCTTTT TGTTCCCCAGGGCAGTAACATCGTTTCCATCAAGGGCAGAAATTTCCAGG ATATTACCTACGGGAGTTCCAACGGTCCTGTGCGTCCGGCGTCAACCCCT CTCGTGGTACTCACCAATGGAGGCACAGCTAGCGCGGCGGAGATCGTTTC CGGGGCTGTCCAG
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Coding sequence (CDS) from alignment at H-elongata_contig52287:142..3554-

>mRNA_H-elongata_contig52287.12534.1 ID=mRNA_H-elongata_contig52287.12534.1|Name=mRNA_H-elongata_contig52287.12534.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1692bp|location=Sequence derived from alignment at H-elongata_contig52287:142..3554- (Himanthalia elongata Himel1 dioecious)
CAGAACAACCAAGCGGCGGCTGATCTAAAGGAAACCGTGTCAGGGAGATA
TGGTGGGGTTGGCTTGGTGATCTCGGGGGGTAAGCAACCACAGCCGCAGC
CGCAGGAAGAATCGCAGTTGCTGCCGAAAAAGGCCAATCCTCAGAACAAC
CAAGCGGCGGCTGATCTAAAGGAAACCGTGTCAGGGAGATATGGTGGGGT
TGGCTTGGTGATCTCGGGGGGTAAGCAACCACAGCCGCAGCCGCAGGAAG
AATCGCAGTTGCTGCCGAAAAAGGCCAATCCTGGTACCGGCGGGCGCGGC
GTGGGTGGATCAAAGGGCAAGGTAGACAAGCCCGGCGCAAAGAAGGGGAA
GATGGGCGATCGAGTGCTGAGCCGCGACGGCATCACGGTGGTGTCTGCGT
TTGAGGGGTACGCGTTCGACGCCGGCATGCGCGCCGGGGATCGAATAACG
GCGATCAACGGCCAGCCCGTGGCCGGCATCTCGGTGGATAAGGGTACCGG
CGGGCGCGGCGTGGGTGGATCAAAGGGCAAGGTAGACAAGCCCGGCGCAA
AGAAGGGGAAGATGGGCGATCGAGTGCTGAGCCGCGACGGCATCACGGTG
GTGTCTGCGTTTGAGGGGTACGCGTTCGACGCCGGCATGCGCGCCGGGGA
TCGAATAACGGCGATCAACGGCCAGCCCGTGGCCGGCATCTCGGTGGATA
AGGCTCGAGATCTCTTGAGGGGCGAGCCTAACTCCAAGGTCAGCATTTCC
TTCATCAGAGACGACAAGAATCAAAACGAACAGGCTCGAGATCTCTTGAG
GGGCGAGCCTAACTCCAAGGTCAGCATTTCCTTCATCAGAGACGACAAGA
ATCAAAACGAACAGGAGATCACCCTTACGAGGAGGCTGGTAAAGCTCCGC
GATGTAAAGCTGGCAACGCTAGTCGGCGATACGAAAAACGCCCCCGTAGG
CTACCTGGAACTCTCCGGATTCAGCACGGGTGCGGCGCAAGAGCTGGGGC
AGGCGTATCGGTACCTTGATTCCATCGCCGAGGGAGGGCTGAGGGGCGTC
ATCCTAGACCTCCGTGGCAATCCCGGAGATCACCCTTACGAGGAGGCTGG
TAAAGCTCCGCGATGTAAAGCTGGCAACGCTAGTCGGCGATACGAAAAAC
GCCCCCGTAGGCTACCTGGAACTCTCCGGATTCAGCACGGGTGCGGCGCA
AGAGCTGGGGCAGGCGTATCGGTACCTTGATTCCATCGCCGAGGGAGGGC
TGAGGGGCGTCATCCTAGACCTCCGTGGCAATCCCGGCGGGCTGCTCGAG
GGGGCCGTGGATGTTTCTGCGCTTTTTGTTCCCCAGGGCAGTAACATCGT
TTCCATCAAGGGCAGAAATTTCCAGGATATTACCTACGGGAGTTCCAACG
GTCCTGTGCGTCCGGCGTCAACCCCTCTCGTGGTACTCACCAATGGAGGC
ACAGCTAGCGCGGCGGAGATCGTTTCCGGGGCTGTCCAGGCGGGCTGCTC
GAGGGGGCCGTGGATGTTTCTGCGCTTTTTGTTCCCCAGGGCAGTAACAT
CGTTTCCATCAAGGGCAGAAATTTCCAGGATATTACCTACGGGAGTTCCA
ACGGTCCTGTGCGTCCGGCGTCAACCCCTCTCGTGGTACTCACCAATGGA
GGCACAGCTAGCGCGGCGGAGATCGTTTCCGGGGCTGTCCAG
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