mRNA_H-elongata_contig52158.12507.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig52158.12507.1
Unique NamemRNA_H-elongata_contig52158.12507.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig52158.12507.1 vs. uniprot
Match: D8LBN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN3_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 6.580e-54
Identity = 119/284 (41.90%), Postives = 148/284 (52.11%), Query Frame = 1
Query:   97 GIGGRYKLVVASNRDEILNRPTAPLHFWKDAKSNLLAGTRIFAHQSILCARSRRRDLVSGGTWLGVNRSGKFATVTNVNSEWDDFVAFVGVGAMSTRAAFAT---------------------------------------------------TAVAATVAAATIVKRRGGTWALSLGLVCAGIATASVSLMVT-ATAAFRKSRGGLVSEFLKGSESADQYCARILKARGEEAMDRCRYAGFNLMLMDPRSAWMLSNRGEEAATRLPRGLYGISTASLDTPWAK 792
            GI GRYKL+VASNRDE L RPTAP+HFWKDA SNLLAG                RDLV+GGTWLGV+RSGKFAT+TNV+S W++ +  V +G  + + A                                                      +++  +  A + +      W  +L      +  ASV L V  A A  RKSRGGLV++FLKG E A+ YC+R+ K       +R RYAGFNL+L DP  AW+LSNR E   TRLP G YGIS  +LD PWAK
Sbjct:   18 GIRGRYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAG----------------RDLVAGGTWLGVSRSGKFATLTNVSSTWENVLEDVTLGGWANKVAAVAXXXXXXXXXXXXXXXXXRAGHENGISXXXXXXXXXXXXXXXXXXXXXXXXVSSLGLSRPAGSSLSSSSLGWLYALCAAAGLVTAASVPLAVAVARAKARKSRGGLVADFLKGDEDAETYCSRLSK-------ERRRYAGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTLDKPWAK 278          
BLAST of mRNA_H-elongata_contig52158.12507.1 vs. uniprot
Match: A0A6H5KFS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS5_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 1.500e-52
Identity = 124/296 (41.89%), Postives = 153/296 (51.69%), Query Frame = 1
Query:   97 GIGGRYKLVVASNRDEILNRPTAPLHFWKDAKSNLLAGTRIFAHQSILCARSRRRDLVSGGTWLGVNRSGKFATVTNVNSEWDDFVAFVGVGAMSTRAA-----------------------------------------------------------FATTAVAATVAAATIVKRRGGTWALSLGLVCAGIATASVSLMVTATAAF--RKSRGGLVSEFLKGSESADQYCARILKARGEEAMDRCRYAGFNLMLMDPRSAWMLSNRGEEAATRLPRGLYGISTASLDTPWAKVYY 801
            GI GRYKL+VASNRDE L RPTAP+HFWKDA SNLLAG    A          RRDLV+GGTWLGV+RSGKFAT+TNV S W+  +  V +G  + +AA                                                           F+T A      +++     G  +AL      AG+ TA+   +  A A    RKSRGGLV++FLKG E A+ YCAR+ K       +R R+AGFNL+L DP  AW+LSNR E   TRLP G YGIS  +LD PWAK+ +
Sbjct:   18 GIRGRYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGEYPKARP--------RRDLVAGGTWLGVSRSGKFATLTNVFSTWESMLEVVALGGWANKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLGFSTPA-----GSSSSSSLLGWLYALCAA---AGLVTAASVPLAVAVARIKARKSRGGLVADFLKGDEDAETYCARLSK-------ERRRFAGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTLDKPWAKMLH 290          
BLAST of mRNA_H-elongata_contig52158.12507.1 vs. uniprot
Match: B7S3D3_9GAMM (Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 TaxID=247634 RepID=B7S3D3_9GAMM)

HSP 1 Score: 99.4 bits (246), Expect = 3.710e-21
Identity = 74/235 (31.49%), Postives = 95/235 (40.43%), Query Frame = 1
Query:  100 IGGRYKLVVASNRDEILNRPTAPLHFWKDAKSNLLAGTRIFAHQSILCARSRRRDLVSGGTWLGVNRSGKFATVTNVNSEWDDFVAFVGVGAMSTRAAFATTAVAATVAAATIVKRRGGTWALSLGLVCAGIATASVSLMVTATAAFRKSRGGLVSEFLKGSESADQYCARILKARGEEAMDRCRYAGFNLMLMDPRSAWMLSNRG---EEAATRLPRGLYGISTASLDTPWAKV 795
            +  +Y LVVA+NRDE   RPT   H+W +             H  +L  R R+    +GG+W+GVNRSG FA VTN                                                                   T A  +SRG LV  +L+G  SA QY  ++    G        YAGFNL+L D    W +SN G   E++  RL  G+YG+S ASLDTPW KV
Sbjct:   10 VNNQYPLVVAANRDEFHQRPTDASHYWLE-------------HPQVLAGRDRQ----AGGSWMGVNRSGHFAAVTNSRDPEQ-------------------------------------------------------------TKAAERSRGELVLGYLQGDLSAQQYLDQLSLRAGA-------YAGFNLLLGDREDLWYVSNSGPSSEQSPRRLTPGIYGLSNASLDTPWPKV 159          
BLAST of mRNA_H-elongata_contig52158.12507.1 vs. uniprot
Match: A0A1W9LDS1_9DELT (Uncharacterized protein n=1 Tax=Desulfobacteraceae bacterium A6 TaxID=1934249 RepID=A0A1W9LDS1_9DELT)

HSP 1 Score: 94.7 bits (234), Expect = 2.230e-19
Identity = 74/228 (32.46%), Postives = 96/228 (42.11%), Query Frame = 1
Query:  112 YKLVVASNRDEILNRPTAPLHFWKDAKSNLLAGTRIFAHQSILCARSRRRDLVSGGTWLGVNRSGKFATVTNVNSEWDDFVAFVGVGAMSTRAAFATTAVAATVAAATIVKRRGGTWALSLGLVCAGIATASVSLMVTATAAFRKSRGGLVSEFLKGSESADQYCARILKARGEEAMDRCRYAGFNLMLMDPRSAWMLSNRGEEAATRLPRGLYGISTASLDTPWAKV 795
            Y+L++A+NRDE  +RPTAPL FW +A  ++LAG                +DL SGGTWLG+ ++G+   +TN     D  V  +                                                             SRG LV  FLKGSES   Y  ++ +A GE      RY GFNL+  D    +  SNR E+   RL  GLYG+S   LDTPW KV
Sbjct:   14 YRLILAANRDEFYDRPTAPLGFWDEAP-HVLAG----------------KDLKSGGTWLGITKAGRICAITNFR---DPAVQLIDA----------------------------------------------------------PSRGFLVENFLKGSESPQIYLQKVKEA-GE------RYNGFNLLAGDESGIFCCSNRSEDII-RLSPGLYGLSNHLLDTPWPKV 155          
BLAST of mRNA_H-elongata_contig52158.12507.1 vs. uniprot
Match: A0A353MA24_9DELT (Uncharacterized protein n=2 Tax=Geobacteraceae TaxID=213422 RepID=A0A353MA24_9DELT)

HSP 1 Score: 93.2 bits (230), Expect = 7.030e-19
Identity = 72/229 (31.44%), Postives = 98/229 (42.79%), Query Frame = 1
Query:  109 RYKLVVASNRDEILNRPTAPLHFWKDAKSNLLAGTRIFAHQSILCARSRRRDLVSGGTWLGVNRSGKFATVTNVNSEWDDFVAFVGVGAMSTRAAFATTAVAATVAAATIVKRRGGTWALSLGLVCAGIATASVSLMVTATAAFRKSRGGLVSEFLKGSESADQYCARILKARGEEAMDRCRYAGFNLMLMDPRSAWMLSNRGEEAATRLPRGLYGISTASLDTPWAKV 795
            RY L++A NRDE   RPTA   +W+DA ++L AG                RDLV GGTWLGV  +G+ A +TN            GV                                                          +SRG LVSEFLKG  +A++Y  R+   RG+       Y+G+NL+L DP   +  SN+ +E  T +P G++G+S   L+TPW KV
Sbjct:   13 RYPLILAVNRDEFYQRPTAAAAYWEDA-AHLFAG----------------RDLVHGGTWLGVTSTGRIAALTNYRQP-----KLPGVHG--------------------------------------------------------RSRGELVSEFLKGETTAEEYLERL---RGKGV----HYSGYNLLLGDPGRLYCYSNKSDEIVT-IPPGVHGLSNHLLNTPWPKV 155          
BLAST of mRNA_H-elongata_contig52158.12507.1 vs. uniprot
Match: A0A523P9S6_9PROT (NRDE family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P9S6_9PROT)

HSP 1 Score: 91.3 bits (225), Expect = 3.840e-18
Identity = 71/229 (31.00%), Postives = 96/229 (41.92%), Query Frame = 1
Query:  109 RYKLVVASNRDEILNRPTAPLHFWKDAKSNLLAGTRIFAHQSILCARSRRRDLVSGGTWLGVNRSGKFATVTNVNSEWDDFVAFVGVGAMSTRAAFATTAVAATVAAATIVKRRGGTWALSLGLVCAGIATASVSLMVTATAAFRKSRGGLVSEFLKGSESADQYCARILKARGEEAMDRCRYAGFNLMLMDPRSAWMLSNRGEEAATRLPRGLYGISTASLDTPWAKV 795
            RY L+VA+NR+E  +RPTA   FW DA S +LAG                RDL+  GTWLG+ R G+FA +TN  S                                                             V A  +   SRGGLVSEFL+G+++ D Y A ++        +   Y+GF+L++ D       SN+ E    +L  GLYG+S   LDTPW K+
Sbjct:   13 RYPLIVAANREEAYDRPTAAAAFWDDAPS-VLAG----------------RDLLQRGTWLGITRQGRFAALTNFRS-------------------------------------------------------------VEANRSDGPSRGGLVSEFLRGNQTPDDYLAEVVA-------NSHSYSGFSLIVGDGSKFRYYSNQ-EHEPRQLVSGLYGVSNHLLDTPWPKL 155          
BLAST of mRNA_H-elongata_contig52158.12507.1 vs. uniprot
Match: A0A365KAS4_9BACL (Uncharacterized protein n=12 Tax=Planococcus TaxID=1372 RepID=A0A365KAS4_9BACL)

HSP 1 Score: 89.0 bits (219), Expect = 2.590e-17
Identity = 71/229 (31.00%), Postives = 92/229 (40.17%), Query Frame = 1
Query:  109 RYKLVVASNRDEILNRPTAPLHFWKDAKSNLLAGTRIFAHQSILCARSRRRDLVSGGTWLGVNRSGKFATVTNVNSEWDDFVAFVGVGAMSTRAAFATTAVAATVAAATIVKRRGGTWALSLGLVCAGIATASVSLMVTATAAFRKSRGGLVSEFLKGSESADQYCARILKARGEEAMDRCRYAGFNLMLMDPRSAWMLSNRGEEAATRLPRGLYGISTASLDTPWAKV 795
            RYKL+VA+NRDE   RP AP HFW+D+   +LAG                RDL   GTWLGVN++G+FA +TN                                                 G + AG                 KSRG LV++FL G  S   Y          +A+D   YAGFNL+  D    +  +N   E    +P G +G+S   L+TPW KV
Sbjct:   13 RYKLIVAANRDEFYGRPAAPAHFWEDSP-RILAG----------------RDLSQMGTWLGVNKAGRFAALTNYRDP---------------------------------------------GHMAAGA----------------KSRGELVTQFLDGHLSPQDYL---------QAIDDREYAGFNLIAGDAEGLYYYNNIHGEPV-EIPPGTHGLSNHFLNTPWPKV 153          
BLAST of mRNA_H-elongata_contig52158.12507.1 vs. uniprot
Match: UPI001ADB1978 (NRDE family protein n=1 Tax=Bacillus sp. 165 TaxID=1529117 RepID=UPI001ADB1978)

HSP 1 Score: 89.0 bits (219), Expect = 2.830e-17
Identity = 73/232 (31.47%), Postives = 94/232 (40.52%), Query Frame = 1
Query:  100 IGGRYKLVVASNRDEILNRPTAPLHFWKDAKSNLLAGTRIFAHQSILCARSRRRDLVSGGTWLGVNRSGKFATVTNVNSEWDDFVAFVGVGAMSTRAAFATTAVAATVAAATIVKRRGGTWALSLGLVCAGIATASVSLMVTATAAFRKSRGGLVSEFLKGSESADQYCARILKARGEEAMDRCRYAGFNLMLMDPRSAWMLSNRGEEAATRLPRGLYGISTASLDTPWAKV 795
            I   Y L+VA+NRDE  NRPTA  HFW+DA  ++LAG                RDL   GTW+GV + G+FA +TN     +                                                          +T+    ++SRG +VS+FL G  S   Y   I + R E       Y GFNL++ D  S +  SN  E+    L  GLYGIS   LDTPW KV
Sbjct:   10 IDPNYDLIVAANRDEFYNRPTARAHFWEDAP-HVLAG----------------RDLEKMGTWMGVTKQGRFAALTNYRDPSE----------------------------------------------------------ITSN---KRSRGEVVSQFLLGEASPQDYVKHIQQNRRE-------YPGFNLLVGDRNSLFYYSNI-EDNIHLLQPGLYGISNHLLDTPWPKV 155          
BLAST of mRNA_H-elongata_contig52158.12507.1 vs. uniprot
Match: UPI0014076C70 (NRDE family protein n=1 Tax=Pseudomaricurvus alcaniphilus TaxID=1166482 RepID=UPI0014076C70)

HSP 1 Score: 87.8 bits (216), Expect = 7.660e-17
Identity = 73/228 (32.02%), Postives = 90/228 (39.47%), Query Frame = 1
Query:  112 YKLVVASNRDEILNRPTAPLHFWKDAKSNLLAGTRIFAHQSILCARSRRRDLVSGGTWLGVNRSGKFATVTNVNSEWDDFVAFVGVGAMSTRAAFATTAVAATVAAATIVKRRGGTWALSLGLVCAGIATASVSLMVTATAAFRKSRGGLVSEFLKGSESADQYCARILKARGEEAMDRCRYAGFNLMLMDPRSAWMLSNRGEEAATRLPRGLYGISTASLDTPWAKV 795
            Y L+VA+NRDE   RPT   HFW D             H  IL  R    DL +GGTWLGVNR+G  A VTNV +  D+                                                                 +SRG L SEFL G    D+   + + AR ++      Y GFNL+L +       SNRG  A   L  G+YG+S A+LDTPW KV
Sbjct:   14 YPLIVAANRDEFYARPTRSAHFWPD-------------HPQILAGR----DLQAGGTWLGVNRAGHLAAVTNVRNPADNLPR-------------------------------------------------------------PRSRGELPSEFLCGDGDIDR-ALQDIGARHDQ------YNGFNLLLANRTQLAYTSNRGTTAPA-LDAGVYGLSNATLDTPWPKV 155          
BLAST of mRNA_H-elongata_contig52158.12507.1 vs. uniprot
Match: A0A3S0UYY6_9GAMM (NRDE family protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3S0UYY6_9GAMM)

HSP 1 Score: 86.3 bits (212), Expect = 2.860e-16
Identity = 69/232 (29.74%), Postives = 93/232 (40.09%), Query Frame = 1
Query:  109 RYKLVVASNRDEILNRPTAPLHFWKDAKSNLLAGTRIFAHQSILCARSRRRDLVSGGTWLGVNRSGKFATVTNVN---SEWDDFVAFVGVGAMSTRAAFATTAVAATVAAATIVKRRGGTWALSLGLVCAGIATASVSLMVTATAAFRKSRGGLVSEFLKGSESADQYCARILKARGEEAMDRCRYAGFNLMLMDPRSAWMLSNRGEEAATRLPRGLYGISTASLDTPWAKV 795
            R+ L+VA+NRDE  +RPTAPL FW DA  ++LAG                RDL  GGTW+G+   G+FA +TN     S   D                                                                  SRG LVS++L+G++SA  Y   +L            Y GFNL+L D    +  SN+G+     +P G+YG+S   LDTPW K+
Sbjct:   13 RWPLLVAANRDEFHDRPTAPLAFWTDAP-HVLAG----------------RDLREGGTWMGLGHGGRFAALTNYRDPRSHQPD----------------------------------------------------------------APSRGQLVSDYLRGTQSARAYLDALLP-------HAAAYNGFNLLLSDATGLYYYSNQGDAPRALVP-GIYGLSNHLLDTPWPKL 155          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52158.12507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBN3_ECTSI6.580e-5441.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFS5_9PHAE1.500e-5241.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B7S3D3_9GAMM3.710e-2131.49Uncharacterized protein n=1 Tax=marine gamma prote... [more]
A0A1W9LDS1_9DELT2.230e-1932.46Uncharacterized protein n=1 Tax=Desulfobacteraceae... [more]
A0A353MA24_9DELT7.030e-1931.44Uncharacterized protein n=2 Tax=Geobacteraceae Tax... [more]
A0A523P9S6_9PROT3.840e-1831.00NRDE family protein n=1 Tax=Proteobacteria bacteri... [more]
A0A365KAS4_9BACL2.590e-1731.00Uncharacterized protein n=12 Tax=Planococcus TaxID... [more]
UPI001ADB19782.830e-1731.47NRDE family protein n=1 Tax=Bacillus sp. 165 TaxID... [more]
UPI0014076C707.660e-1732.02NRDE family protein n=1 Tax=Pseudomaricurvus alcan... [more]
A0A3S0UYY6_9GAMM2.860e-1629.74NRDE family protein n=1 Tax=Candidatus Competibact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52158contigH-elongata_contig52158:2020..3608 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score99.4
Seed ortholog evalue2.9e-18
Seed eggNOG ortholog247634.GPB2148_2747
EggNOG free text desc.Transport and Golgi organisation 2
EggNOG OGs1RDBS@1224,1S43Y@1236,COG3332@1,COG3332@2
COG Functional cat.S
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size831
Cds size831
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52158.12507.1prot_H-elongata_contig52158.12507.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig52158 2020..3608 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930852.6784468-CDS-H-elongata_contig52158:2019..22081622930852.6784468-CDS-H-elongata_contig52158:2019..2208Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52158 2020..2208 -
1691679598.1890366-CDS-H-elongata_contig52158:2019..22081691679598.1890366-CDS-H-elongata_contig52158:2019..2208Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52158 2020..2208 -
1622930852.7079465-CDS-H-elongata_contig52158:2469..28551622930852.7079465-CDS-H-elongata_contig52158:2469..2855Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52158 2470..2855 -
1691679598.2006779-CDS-H-elongata_contig52158:2469..28551691679598.2006779-CDS-H-elongata_contig52158:2469..2855Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52158 2470..2855 -
1622930852.7278254-CDS-H-elongata_contig52158:3352..36081622930852.7278254-CDS-H-elongata_contig52158:3352..3608Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52158 3353..3608 -
1691679598.2128901-CDS-H-elongata_contig52158:3352..36081691679598.2128901-CDS-H-elongata_contig52158:3352..3608Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52158 3353..3608 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig52158.12507.1

>prot_H-elongata_contig52158.12507.1 ID=prot_H-elongata_contig52158.12507.1|Name=mRNA_H-elongata_contig52158.12507.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=277bp
CIVFIYHAIGDPLGDHPETTRTSSSLVDKPVTGIGGRYKLVVASNRDEIL
NRPTAPLHFWKDAKSNLLAGTRIFAHQSILCARSRRRDLVSGGTWLGVNR
SGKFATVTNVNSEWDDFVAFVGVGAMSTRAAFATTAVAATVAAATIVKRR
GGTWALSLGLVCAGIATASVSLMVTATAAFRKSRGGLVSEFLKGSESADQ
YCARILKARGEEAMDRCRYAGFNLMLMDPRSAWMLSNRGEEAATRLPRGL
YGISTASLDTPWAKVYYQCAGSVFKA*
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mRNA from alignment at H-elongata_contig52158:2020..3608-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig52158.12507.1 ID=mRNA_H-elongata_contig52158.12507.1|Name=mRNA_H-elongata_contig52158.12507.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1589bp|location=Sequence derived from alignment at H-elongata_contig52158:2020..3608- (Himanthalia elongata Himel1 dioecious)
TGTATCGTGTTTATCTACCACGCGATAGGGGACCCGCTCGGGGATCACCC GGAGACGACGCGAACATCTTCGTCGCTCGTTGACAAACCCGTCACGGGGA TTGGCGGGCGCTACAAGCTTGTCGTCGCTTCAAATCGAGACGAGATCTTG AACAGACCAACAGCACCCCTACATTTCTGGAAGGATGCCAAATCCAACTT GCTCGCAGGCACGCGAATCTTTGCACATCAGTCAATCTTGTGCGCTCGCT CTCGACGTGACTTTCTCTCCAGACCCATTCGCTCTTTATCGCTGACCATA TGCTCTGCCCTGAGTGTACACCTCACAAAGATATAGGACATGCAGGGATG TGCGGCATGACACTGCGACAGGGATCGACGTGGATGGTCTTGAAATATGG CTAAACAAAGATTACATTCTGTTAGTGCTCGAAGAACTTCGCGGACGCTT CCGAGCACTTGTCGTGTTGTTTCCGTCCGTATTACTCTCTGTGTAAAATT TACATTACAGAGAGTCAGATGCGCATAACGTGGAATGTGCCTTTTTTGTT GCTCCTCCGAACGTTCCCAAACTTCACGAATACCACGAACTACTGTCGAG TAGAACTACCGGTGATATATTGATTATTTCATTACGTGCTTCCTTATGCC TTCCTCCACCTCCATCAAAGTCACCCTTTTTTCTTTCTCTCTTCTGCCTT CTGACGCCCACGACTGCCATTGTTCTTGTTGCCGCGTCCTTCGTGGTCCA TAGGTCGCGACTTGGTCTCGGGAGGAACGTGGCTTGGTGTGAACCGGTCG GGAAAGTTCGCCACCGTGACCAATGTCAACTCCGAGTGGGATGATTTCGT CGCCTTCGTTGGGGTGGGGGCGATGTCGACGCGTGCGGCTTTCGCAACGA CGGCCGTTGCCGCAACGGTAGCGGCCGCGACAATCGTGAAAAGAAGGGGG GGCACCTGGGCACTGTCGCTCGGGCTAGTCTGCGCGGGTATAGCGACGGC GTCAGTTAGTCTGATGGTGACCGCAACCGCTGCTTTCCGGAAAAGCCGTG GCGGGCTCGTATCCGAGTTCTTGAAGGGGAGTGAAAGCGCGGACCAGTAC TGCGCGCGCATCTTAAAGGCAAGAGGGGAAGAAGCAATGGTCGTATTGCC TTGTACCTATAATTCTGTATTTGCAACCCTTGCCGTGTACAGGAAGACTC TTCAAGCTCTGGTTTGCGGCTGTACACGCCTGTCGTGACACGTTTTCGAA GTAGTTTGTGGTGCTGGGATGACATTTGGGGTGATGCCTGCACCCAAAAC GTGATAGCCCGATCAATTGTCGTTTTACGAGTCGTCCGCGGCTTGAAAAC AAAAACAACGCGCCCCTCCGACGTCCCAAAGCTGATGATCACGTTCACAG GATCGCTGTCGGTACGCCGGCTTCAACCTGATGTTGATGGACCCGAGGAG CGCTTGGATGCTTAGCAACAGGGGCGAGGAAGCGGCCACGCGCCTTCCTC GCGGACTGTACGGCATCAGTACCGCCTCCTTGGACACTCCATGGGCCAAG GTATATTATCAGTGTGCAGGAAGTGTATTCAAAGCATAA
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Coding sequence (CDS) from alignment at H-elongata_contig52158:2020..3608-

>mRNA_H-elongata_contig52158.12507.1 ID=mRNA_H-elongata_contig52158.12507.1|Name=mRNA_H-elongata_contig52158.12507.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1662bp|location=Sequence derived from alignment at H-elongata_contig52158:2020..3608- (Himanthalia elongata Himel1 dioecious)
TGTATCGTGTTTATCTACCACGCGATAGGGGACCCGCTCGGGGATCACCC
GGAGACGACGCGAACATCTTCGTCGCTCGTTGACAAACCCGTCACGGGGA
TTGGCGGGCGCTACAAGCTTGTCGTCGCTTCAAATCGAGACGAGATCTTG
AACAGACCAACAGCACCCCTACATTTCTGGAAGGATGCCAAATCCAACTT
GCTCGCAGGCACGCGAATCTTTGCACATCAGTCAATCTTGTGCGCTCGCT
CTCGACTGTATCGTGTTTATCTACCACGCGATAGGGGACCCGCTCGGGGA
TCACCCGGAGACGACGCGAACATCTTCGTCGCTCGTTGACAAACCCGTCA
CGGGGATTGGCGGGCGCTACAAGCTTGTCGTCGCTTCAAATCGAGACGAG
ATCTTGAACAGACCAACAGCACCCCTACATTTCTGGAAGGATGCCAAATC
CAACTTGCTCGCAGGCACGCGAATCTTTGCACATCAGTCAATCTTGTGCG
CTCGCTCTCGACGTCGCGACTTGGTCTCGGGAGGAACGTGGCTTGGTGTG
AACCGGTCGGGAAAGTTCGCCACCGTGACCAATGTCAACTCCGAGTGGGA
TGATTTCGTCGCCTTCGTTGGGGTGGGGGCGATGTCGACGCGTGCGGCTT
TCGCAACGACGGCCGTTGCCGCAACGGTAGCGGCCGCGACAATCGTGAAA
AGAAGGGGGGGCACCTGGGCACTGTCGCTCGGGCTAGTCTGCGCGGGTAT
AGCGACGGCGTCAGTTAGTCTGATGGTGACCGCAACCGCTGCTTTCCGGA
AAAGCCGTGGCGGGCTCGTATCCGAGTTCTTGAAGGGGAGTGAAAGCGCG
GACCAGTACTGCGCGCGCATCTTAAAGGCAAGAGGGGAAGAAGCAATGGT
CGCGACTTGGTCTCGGGAGGAACGTGGCTTGGTGTGAACCGGTCGGGAAA
GTTCGCCACCGTGACCAATGTCAACTCCGAGTGGGATGATTTCGTCGCCT
TCGTTGGGGTGGGGGCGATGTCGACGCGTGCGGCTTTCGCAACGACGGCC
GTTGCCGCAACGGTAGCGGCCGCGACAATCGTGAAAAGAAGGGGGGGCAC
CTGGGCACTGTCGCTCGGGCTAGTCTGCGCGGGTATAGCGACGGCGTCAG
TTAGTCTGATGGTGACCGCAACCGCTGCTTTCCGGAAAAGCCGTGGCGGG
CTCGTATCCGAGTTCTTGAAGGGGAGTGAAAGCGCGGACCAGTACTGCGC
GCGCATCTTAAAGGCAAGAGGGGAAGAAGCAATGGATCGCTGTCGGTACG
CCGGCTTCAACCTGATGTTGATGGACCCGAGGAGCGCTTGGATGCTTAGC
AACAGGGGCGAGGAAGCGGCCACGCGCCTTCCTCGCGGACTGTACGGCAT
CAGTACCGCCTCCTTGGACACTCCATGGGCCAAGGTATATTATCAGTGTG
CAGGAAGTGTATTCAAAGCATAAGATCGCTGTCGGTACGCCGGCTTCAAC
CTGATGTTGATGGACCCGAGGAGCGCTTGGATGCTTAGCAACAGGGGCGA
GGAAGCGGCCACGCGCCTTCCTCGCGGACTGTACGGCATCAGTACCGCCT
CCTTGGACACTCCATGGGCCAAGGTATATTATCAGTGTGCAGGAAGTGTA
TTCAAAGCATAA
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