mRNA_H-elongata_contig52076.12493.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig52076.12493.1 vs. uniprot
Match: A0A6H5LIS9_9PHAE (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LIS9_9PHAE) HSP 1 Score: 278 bits (710), Expect = 7.530e-90 Identity = 131/192 (68.23%), Postives = 154/192 (80.21%), Query Frame = 1
Query: 7 CQNIGIKWDEEVARLRDAKDWDAALADLVRNTTVETSAEYLKPFHTYPEGNLCWEAAWEQHLASKAVGVRNFPNDARNGERLLRGAYEKQMERLGVVVEKGGLVVDVGCGTGTSTRRLAEQHPSAGRVIGIDLSPHMVLVGQFMAERDENADQRVDLRYADARNTGLPDGSASLVSICLVLHEMWAEGRREV 582
++IG+ WD EVARLRDA+DWDAALA L+ ++VE Y KPFH Y +GNLCWEAAWEQHLASKAVG RNFP DA GE LLR YE QMERLGV+VE GGLVVD+GCG+GTSTR LAEQ PSAG+V+G+DLSP+M+L G+FM + DENAD RV+L Y DA TGL D SASLVS+ LV+HE+ EGRR +
Sbjct: 97 AEDIGVDWDAEVARLRDAQDWDAALAGLLETSSVEVPDYYKKPFHAYADGNLCWEAAWEQHLASKAVGFRNFPEDAERGEHLLRKGYEAQMERLGVLVEDGGLVVDLGCGSGTSTRYLAEQFPSAGKVVGVDLSPYMLLTGRFMQQEDENADPRVELEYGDAARTGLEDNSASLVSLSLVVHELSTEGRRSI 288
BLAST of mRNA_H-elongata_contig52076.12493.1 vs. uniprot
Match: A0A7S3UW00_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW00_HETAK) HSP 1 Score: 186 bits (472), Expect = 1.600e-54 Identity = 97/199 (48.74%), Postives = 123/199 (61.81%), Query Frame = 1
Query: 7 CQNIGIKWDEEVARLRDAKDWDAALADLVRNTT-----VETSAEYLKPFHTYPEGNLCWEAAWEQHLASKAVGVRNFPNDARNGERLLRGAYEKQMERLGVVVEKGGLVVDVGCGTGTSTRRLAEQHPSAGRVIGIDLSPHMVLVGQFMAER----------DENADQRVDLRYADARNTGLPDGSASLVSICLVLHEM 558
+ G++WD E+ RLR +DWD A+ VR V A Y +PFHTYP GN CW+AA+EQ LASKAVGVRNFP + GE +LRG ++ +M+R+GV V GG VVD+GCGTGTS R+LAE +P A V+G+DLS M+ VG+ D A+ RV L YAD T LPD A LV+ LV HE+
Sbjct: 68 AEAAGVEWDAELERLRAIEDWDER-AERVRAAAGGAAAVAAPAYYARPFHTYPRGNTCWDAAFEQELASKAVGVRNFPAEGARGEDVLRGCFKAEMDRMGVAVPPGGRVVDLGCGTGTSARKLAEWYPEAAEVVGVDLSAEMLAVGEHYLRGEAPEARQDRGDPTANARVRLEYADMAATRLPDACADLVTFSLVFHEL 265
BLAST of mRNA_H-elongata_contig52076.12493.1 vs. uniprot
Match: A0A6H5JWN2_9PHAE (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWN2_9PHAE) HSP 1 Score: 185 bits (469), Expect = 1.820e-53 Identity = 96/193 (49.74%), Postives = 124/193 (64.25%), Query Frame = 1
Query: 7 CQNIGIKWDEEVARLRDAKDWDAALAD-LVRNTTVETSAEYLKPFHTYPEGNLCWEAAWEQHLASKAVGVRNFPNDARNGERLLRGAYEKQMERLGVVVEKGGLVVDVGCGTGTSTRRLAEQHPSAGRVIGIDLSPHMVLVGQFMAERDENADQRVDLRYADARNTGLPDGSASLVSICLVLHEMWAEGRREV 582
+ G+ W V L+ A++W+ + L +NT V YLK FH Y +GNLCW+AA+EQ +AS AVG+R+FP + N E+ LR AY Q+ RLG VEKGG++VD GCG GTSTR LAE P A RVIG+DLSP+M+ VG R++ +RV L Y D +T LPDG SLVS +LHEM E R+V
Sbjct: 121 AEKRGLDWTGIVEGLKGAENWEKRRTEILAKNTNVVVPEYYLKQFHAYGDGNLCWQAAFEQEIASLAVGIRSFPKEGLNAEKYLRDAYIAQLTRLGGQVEKGGVIVDFGCGVGTSTRLLAESMPGARRVIGMDLSPYMIAVGNHH-NREKKTGRRVSLVYGDVADTRLPDGGTSLVSCTYLLHEMPDEAVRDV 312
BLAST of mRNA_H-elongata_contig52076.12493.1 vs. uniprot
Match: A0A813CGD5_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813CGD5_9DINO) HSP 1 Score: 172 bits (435), Expect = 6.080e-49 Identity = 90/198 (45.45%), Postives = 122/198 (61.62%), Query Frame = 1
Query: 19 GIKWDEEVARLRDAKDWD-AALADLVRNTTVETSAEYLKPFHTYPEGNLCWEAAWEQHLASKAVGVRNFPNDARNGERLLRGAYEKQMERLGVVVEKGGLVVDVGCGTGTSTRRLAEQHPSAGRVIGIDLSPHMVLVGQFMAE---------RDENADQRVDLRYADARNTGLPDGSASLVSICLVLHEMWAEGRREV 582
GI W + +R WD L +L ++ + + Y KPFH Y GNL WEAA+EQ LAS+AVG RNFP ++GE R A++ + LG V GG++VD+GCGTG STRRLA + P A R+IG+DLSP+ V VG+ + E D AD+RV+LR AD +TGLP A+ V++CLV+HE+ + R V
Sbjct: 67 GIGWSSSLEYIRGQGPWDDTVLQELEADSPTKLPSYYKKPFHAYDTGNLNWEAAFEQELASRAVGARNFPAFGKDGEDAFRAAFDNALASLGAAVPDGGVIVDMGCGTGISTRRLAARFPKASRLIGLDLSPYFVAVGRRLMELEPEAGNWVTDVVADKRVELRVADVESTGLPAECATTVNLCLVIHELPPDITRRV 264
BLAST of mRNA_H-elongata_contig52076.12493.1 vs. uniprot
Match: A0A812K4V8_9DINO (CouO protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812K4V8_9DINO) HSP 1 Score: 178 bits (451), Expect = 6.930e-49 Identity = 93/198 (46.97%), Postives = 125/198 (63.13%), Query Frame = 1
Query: 19 GIKWDEEVARLRDAKDWD-AALADLVRNTTVETSAEYLKPFHTYPEGNLCWEAAWEQHLASKAVGVRNFPNDARNGERLLRGAYEKQMERLGVVVEKGGLVVDVGCGTGTSTRRLAEQHPSAGRVIGIDLSPHMVLVGQFMAE---------RDENADQRVDLRYADARNTGLPDGSASLVSICLVLHEMWAEGRREV 582
GI W + +R WD A L +L + + + Y KPFH Y GNL WEAA+EQ LAS+AVG RNFP ++GE R A++ + LG V GG++VD+GCGTG STRRLA + P+A R+IG+DLSP+ V VG+ + E D AD+RV+LR ADA +TGLPD A+ V++CLV+HE+ + R V
Sbjct: 67 GIGWSSSLEYIRGQGPWDDAVLQELEAGSPAKPPSYYKKPFHAYDTGNLNWEAAFEQELASRAVGARNFPAFGKDGEDAFRAAFDNALASLGAAVPDGGVIVDMGCGTGISTRRLAARFPNASRLIGLDLSPYFVAVGRRLMELEPEAGNWVTDVVADKRVELRVADAESTGLPDECATTVNLCLVIHELPPDITRRV 264
BLAST of mRNA_H-elongata_contig52076.12493.1 vs. uniprot
Match: A0A7S1RG62_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RG62_ALECA) HSP 1 Score: 170 bits (430), Expect = 4.370e-48 Identity = 91/204 (44.61%), Postives = 123/204 (60.29%), Query Frame = 1
Query: 7 CQNIGIKWDEEVARLRDAKDWDAALADLVRNTTVETSAE--YLKPFHTYPEGNLCWEAAWEQHLASKAVGVRNFPNDARNGERLLRGAYEKQMERLGVVVEKGGLVVDVGCGTGTSTRRLAEQHPSAGRVIGIDLSPHMVLVGQFMAERDEN----------ADQRVDLRYADARNTGLPDGSASLVSICLVLHEMWAEGRREV 582
++ GI WD +R WD + V+ + +T+ Y KPFH Y GNL WEAA+EQ LAS+AVG RNFP ++GE RGA+++ + +G V GLVVD+GCGTG STRRLA + P A RV+GID+SP+ V VG+ + ER +D RV+L DA +T LPD AS+VS+ LV+HE+ + R V
Sbjct: 52 AESNGIGWDAAFQWIRGEGPWDDEVLQGVQGASGKTTQPDYYRKPFHAYESGNLNWEAAFEQELASRAVGARNFPLHGKDGEEAFRGAFDRALSSVGASVPSDGLVVDLGCGTGASTRRLAARFPRAARVLGIDMSPYFVAVGRRLLERAPGPAEPWVATVQSDPRVELHLGDAAHTQLPDACASVVSLFLVIHELPPDVTRSV 255
BLAST of mRNA_H-elongata_contig52076.12493.1 vs. uniprot
Match: A0A1Q9C0G8_SYMMI (Putative methyltransferase AN0656 n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9C0G8_SYMMI) HSP 1 Score: 175 bits (443), Expect = 4.230e-47 Identity = 91/198 (45.96%), Postives = 123/198 (62.12%), Query Frame = 1
Query: 19 GIKWDEEVARLRDAKDWD-AALADLVRNTTVETSAEYLKPFHTYPEGNLCWEAAWEQHLASKAVGVRNFPNDARNGERLLRGAYEKQMERLGVVVEKGGLVVDVGCGTGTSTRRLAEQHPSAGRVIGIDLSPHMVLVGQFMAE---------RDENADQRVDLRYADARNTGLPDGSASLVSICLVLHEMWAEGRREV 582
GI W + +R WD L +L ++ + + Y KPFH Y GNL WEAA+EQ LAS+AVG RNFP ++GE R A++ + LG V GG++VD+GCGTG STRRLA + P A R+IG+DLSP+ V VG+ + E D AD+RV+LR AD +TGLPD A+ V++CLV+HE+ + R V
Sbjct: 739 GIGWSSSLEYIRGQGPWDDTVLQELEADSPTKLPSYYKKPFHAYDTGNLNWEAAFEQELASRAVGARNFPAFGKDGEDAFRAAFDNALASLGAAVPDGGVIVDMGCGTGISTRRLAARFPKASRLIGLDLSPYFVAVGRRLMELEPEAGNWVTDVVADKRVELRVADVESTGLPDECATTVNLCLVIHELPPDITRRV 936
BLAST of mRNA_H-elongata_contig52076.12493.1 vs. uniprot
Match: A0A812NFZ9_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812NFZ9_9DINO) HSP 1 Score: 168 bits (425), Expect = 4.240e-47 Identity = 92/207 (44.44%), Postives = 125/207 (60.39%), Query Frame = 1
Query: 19 GIKWDEEVARLRDAKDWDAALADLVRNTTVETS----------AEYLKPFHTYPEGNLCWEAAWEQHLASKAVGVRNFPNDARNGERLLRGAYEKQMERLGVVVEKGGLVVDVGCGTGTSTRRLAEQHPSAGRVIGIDLSPHMVLVGQFMAE---------RDENADQRVDLRYADARNTGLPDGSASLVSICLVLHEMWAEGRREV 582
GI W + +R WD ++ + ++ + + Y KPFH Y GNL WEAA+EQ LAS+AVG RNFP ++GE R A++ ++ LG VV +GGL+VD+GCGTG STRRLA + PSA ++IG+DLSP+ V VGQ + E D ADQRV L+ DA +TGL D AS V++CLV+HE+ + R V
Sbjct: 78 GIGWSSALEYIRGQGPWDDSVLQGLSSSDGSDNXXXSALPSLPSYYQKPFHAYDTGNLNWEAAFEQELASRAVGARNFPAFGKDGEDAFRAAFDNALDSLGAVVPEGGLIVDMGCGTGISTRRLAARFPSASQLIGLDLSPYFVAVGQRLMELEPPAETWVTDVVADQRVKLQVKDAEHTGLRDECASNVNLCLVIHELPPDVTRRV 284
BLAST of mRNA_H-elongata_contig52076.12493.1 vs. uniprot
Match: A0A7S0APD6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0APD6_9STRA) HSP 1 Score: 167 bits (423), Expect = 6.730e-47 Identity = 89/197 (45.18%), Postives = 123/197 (62.44%), Query Frame = 1
Query: 7 CQNIGIKWDEEVARLRDAKDWDAALADLVRNTTVETSAEYLKPFHTYPEGNLCWEAAWEQHLASKAVGVRNFPNDARNGERLLRGAYEKQMERLGVVVEKGGLVVDVGCGTGTSTRRLAEQHPSAGRVIGIDLSPHMVLVGQFMAER-----DENA--------DQRVDLRYADARNTGLPDGSASLVSICLVLHEM 558
++ G++W+E + ++ WD D + V+ YLKPFH Y EGN+ W AAWEQ LA +AVG RNFP NGE R A+++ ++ LG VV + +VD+GCGTGTSTRRLAE++ A +IGIDLSP+MV+VG+ + E DE D R++L+ DA TGLPD SA +V+I LV+HE+
Sbjct: 68 AESNGVRWNEALEWIKVQGPWDGQ--DKMP-PGVDYPEYYLKPFHAYEEGNINWGAAWEQELAGRAVGARNFPEYGPNGEDAFRSAFDEALDELGSVVPQDSTIVDMGCGTGTSTRRLAERYSQAKNIIGIDLSPNMVVVGKRLLELAPKGVDEGGPWVTTIQPDDRIELKIGDAATTGLPDSSADVVNIGLVVHEL 261
BLAST of mRNA_H-elongata_contig52076.12493.1 vs. uniprot
Match: A0A7S0LBP4_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LBP4_9EUKA) HSP 1 Score: 166 bits (420), Expect = 1.790e-46 Identity = 84/208 (40.38%), Postives = 122/208 (58.65%), Query Frame = 1
Query: 7 CQNIGIKWDEEVARLRDAKDWDAA-LADLVR-NTTVETSAEYLKPFHTYPEGNLCWEAAWEQHLASKAVGVRNFPNDARNGERLLRGAYEKQMERLGVVVEKGGLVVDVGCGTGTSTRRLAEQHPSAGRVIGIDLSPHMVLVGQFMAERDENA--------------DQRVDLRYADARNTGLPDGSASLVSICLVLHEMWAEGRREV 582
+ G+ W + ++ +++ W L++L R +E Y +PFH Y EGNLCW+AAWE +AS+AVG RNFP GE + R A++ + +G GG +VD+GCGTG STRRL ++P A +V+G+DLSPH + VG+ + E + D+R+ LR ADA NTGLPD S +V + LV+HE+ E RE+
Sbjct: 62 AEENGVPWRDALSWIKEQGPWQLFDLSELARAEQLIEVPEYYRQPFHAYEEGNLCWDAAWEGEIASRAVGARNFPAYGAQGEDVFRAAFDDALISIGATCPDGGKMVDLGCGTGISTRRLGLRYPQASQVLGLDLSPHFLAVGRRLLELARESPSASHTPWVQPLVRDERILLRRADAANTGLPDSSVDVVCLSLVIHELPPEATREI 269 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52076.12493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig52076.12493.1 >prot_H-elongata_contig52076.12493.1 ID=prot_H-elongata_contig52076.12493.1|Name=mRNA_H-elongata_contig52076.12493.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=196bp MYCQNIGIKWDEEVARLRDAKDWDAALADLVRNTTVETSAEYLKPFHTYPback to top mRNA from alignment at H-elongata_contig52076:235..1757- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig52076.12493.1 ID=mRNA_H-elongata_contig52076.12493.1|Name=mRNA_H-elongata_contig52076.12493.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1523bp|location=Sequence derived from alignment at H-elongata_contig52076:235..1757- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig52076:235..1757- >mRNA_H-elongata_contig52076.12493.1 ID=mRNA_H-elongata_contig52076.12493.1|Name=mRNA_H-elongata_contig52076.12493.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1176bp|location=Sequence derived from alignment at H-elongata_contig52076:235..1757- (Himanthalia elongata Himel1 dioecious)back to top |