mRNA_H-elongata_contig51982.12479.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: D8LLY2_ECTSI (30S ribosomal protein S1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLY2_ECTSI) HSP 1 Score: 643 bits (1658), Expect = 4.820e-224 Identity = 334/465 (71.83%), Postives = 384/465 (82.58%), Query Frame = 1
Query: 1 IVQMSPVGEHVGEVTDVLSVGQVVDVRIREVDEKLGRINMSLLPYGEGEEVKTSP-QVTKDVSHLVGSDPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGG-----RGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDHVSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLSMVPPGSYDNEGGGGYGKQ 1377
I QMSP GEHV +V+DVL+VGQVVDVRIREVDEKLGRINMSLLPYG+GE +++P TKDVSHL GSDP EFRKG++SAV DYGLFVNI+GVDGLLHVSKM +DRSI S NIH Y EGQEVE+RI+EVN NKMSLSMLP TE+ DF +Y N+ +EWL+GTVVS+MNYGAFV+L+ VDGMVHISQ+ P GER+DSVYN+V+IG VRVRI+E D ++R++RLTMR+ GG MG RG K+ KSVE+FL+LS EEWI G VASIT+FGAFVAVD+DTDGLLHISQIAEDHVSNVEDHLQ+GQ++QVRVIEVDVDNCRLGLSMREPRQ++PRG RGKKDVS+LLGRDP+EFI GRVVSIVPYGAFVNIEGNIDGLVHISEMA+GRVDS EDV +MGQEVQVRISD+N DNNT+NLSMVP G+YD+ GGGYG +
Sbjct: 244 ISQMSPTGEHVADVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMS-----------TDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTNVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGAT---GGNMGXXXXXXXDRRGTKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPRGA--RGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGDE 692
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A836CHC1_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHC1_9STRA) HSP 1 Score: 361 bits (926), Expect = 1.650e-114 Identity = 205/450 (45.56%), Postives = 284/450 (63.11%), Query Frame = 1
Query: 1 IVQMSPVGEHVGEVTDVLSVGQVVDVRIREVDEKLGRINMSLLPYGEGEEVKTSPQVTKDVSHLVGSDPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGE-RIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDHVSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGN--IDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLSMVPPGS 1341
I Q+ P E V V+DV++VGQ V VR+R+VD+ L R+N+SLLP TS TKDVS L +D A FR G++SAV DYG FV +DGVDGLLH+SK+ EGV T + E S GQEV VRIL V+V NK+SL+M+ D + D S SP+EW++G+VVS YGAFV L +G+DGMVHIS++ GE R+D+V + + +GDAV+VR+IE AR++RL+MR+ G G GRG + K V + + AEEW+EG V S T FGAFVA+ DGLLH+S++A V +D L GQ+I+VRVI+VD + R+GLS+R+ R++ +D+S+L G D F+ G V S+V YG FV ++ I+GL+H+S+++ RV+ DVV G +VQVR+ +V++D +NLSM+P GS
Sbjct: 203 ISQLKPRAERVSNVSDVVTVGQEVQVRLRDVDQDLKRVNLSLLPLSGA----TSAAATKDVSPLASADRATFRAGTVSAVHDYGAFVAVDGVDGLLHISKIE-EGVALT----------PAQLRERLSVGQEVSVRILSVDVAANKLSLTMIADKPEPDLSALAARSPEEWIEGSVVSTTTYGAFVHLGDGIDGMVHISEL---GEGRVDAVTDVLNVGDAVKVRVIEVVPAARKVRLSMREFGAAEAAPRGAASGGARRGRGARGPKDVSAYAAMGAEEWVEGKVVSFTPFGAFVALPGGVDGLLHVSEMASGRVEAPQDVLSEGQEIKVRVIDVDTEAGRIGLSLRQARRAPV-------SRDLSVLAGVDTTAFVPGTVTSVVSYGCFVALDDTPGIEGLLHVSQLSEDRVEEVGDVVAEGDKVQVRVVEVDLDAGKVNLSMLPVGS 627
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A835YL04_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL04_9STRA) HSP 1 Score: 307 bits (786), Expect = 2.940e-93 Identity = 179/457 (39.17%), Postives = 265/457 (57.99%), Query Frame = 1
Query: 7 QMSPVGEHVGEVTDVLSVGQVVDVRIREVDEKLGRINMSLLPYGEGEEVKTS-PQVTKDVSHLVGSDPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDHVSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAP---------RGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIE--GNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLSMVPPGS 1341
Q+ P E V + D LS GQ V VRIREVD +L RI++SLLP EG + +S +DVS + G+DPAEFR G++ ++ +YG+FV +DGVDGLLH S++ EG R ++ + ++ GQ+V VR+ V+ N++SLSM+P D S++ + PD W+DG V + +GAFV + +GVDG+VHISQ+ + + +V + V +GDAVRVR+IE D RR RG VK V +++ E W++G VA++ FGAFV +D DGL+H SQI ED L GQ ++VRV+ D + RL LSM +P ++A + G +DVS+L G DP+ F+TG V S++P+G FV ++ G + GL+H+SE++ GRV+ +VV G ++VR+ +V+ I+LSM+ PGS
Sbjct: 225 QLRPRPERVEDARDALSAGQEVQVRIREVDVELRRISLSLLPLPEGGDGGSSGSSAQRDVSRIEGADPAEFRAGTVVSLTEYGVFVALDGVDGLLHYSQIE-EG----------RQLSPAELRARFAVGQDVSVRVRRVDTAANRLSLSMVPPRAPPDLSRFAALPPDAWIDGAVAATTAFGAFVTIGDGVDGLVHISQLSDEDDFPSAVTDVVNVGDAVRVRVIEVDPE-RRXXXXXXXXXXXXXXXXXXXXXXXXXRRG---VKDVSRYVGADPEAWVDGMVATVVPFGAFVTLDGGVDGLVHASQICGG--GGAEDALSAGQAVRVRVVGADAERGRLELSMLDPTEAAAXXXXTAGRRQRSGSEAPRDVSVLAGADPDAFVTGTVTSVLPFGCFVALDDVGGLQGLLHVSELSEGRVEDVGEVVAEGDRLEVRVVEVDTSTGKISLSMLQPGS 664
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A7X8ZLE9_9BACT (30S ribosomal protein S1 n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X8ZLE9_9BACT) HSP 1 Score: 190 bits (482), Expect = 1.600e-50 Identity = 125/390 (32.05%), Postives = 210/390 (53.85%), Query Frame = 1
Query: 205 PAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLP------DTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDH-VSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLSMVPPGSYDNE 1353
P + R+G + + D+G FV++DG+DGLLH++ M + VSD HE G E+EV IL+++ ++SL + DT DV + K + G VV++M YGAF++LEEG++G+VH+S+M ++I + +Q+GD V I+ + R+I L +R P P E +K EKF + I+G V ++T +GAFV + +D DG++H+S ++ ++N + LQ G +++ ++EVD DN R+ LSM++ + + ++ D + + G+V + +GAFV +EG IDGL+HISE++ RV+ +DVVQ+G V+ R+ +++++ I LSM Y E
Sbjct: 187 PKQIRRGVVKNITDFGAFVDLDGMDGLLHITDM-------SWGRVSDP-------HEIVKVGDEIEVMILDIDKERQRVSLGLKQKEGNPWDTVDVKYPKNTRIH------GKVVNVMPYGAFIELEEGIEGLVHVSEMS-WTKKITRASDVLQVGDEVDAVILNVNKEDRKISLGLRQAQ--PNPWE--------------VIK--EKFPSGTR---IKGKVRNMTGYGAFVQIQDDIDGMIHVSDMSWTRKINNPNEILQKGMEVEAVILEVDADNQRISLSMKQLTEDPWQ----------NIQNRYDIGDVVEGKVTKLASFGAFVELEGGIDGLIHISELSEERVNRVKDVVQVGDVVKARVKNISLEERRIGLSMRENSEYQQE 524
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: E8R5M0_ISOPI (SSU ribosomal protein S1P n=2 Tax=Isosphaera pallida TaxID=128 RepID=E8R5M0_ISOPI) HSP 1 Score: 187 bits (474), Expect = 2.840e-49 Identity = 127/399 (31.83%), Postives = 210/399 (52.63%), Query Frame = 1
Query: 190 LVGSDPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDH-VSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLSMVPPGSYDNEGGGGYGKQLL 1383
L +P + RKG + + D+G FV++ G+DGLLH++ M S IN N + + E+EV ++ V+ K++L + T + E + G VV++M+YGAFVKLEEG++G+VHIS+M +RI+ V IGD V V ++ + + I L M+ P +K + E IEGTV ++TN+GAF+ ++E DGLLHIS ++ + + + LQ G+ I+ +V+ VD + R+ L +++ R+ + D+ PN+ +TG+V + +G FV +E ++GL+HISE++ +V+S +DVVQ+GQE++VR+ V+ + I LS+ P S D G G++ L
Sbjct: 204 LAEIEPGQIRKGVVKNIADFGAFVDLGGIDGLLHITDM------------SWGRIN--NPTDMVAINDEIEVYVIHVDKEKEKIALGLKQKTASPWDNVAEKYPVGSKVTGEVVNVMSYGAFVKLEEGIEGLVHISEMS-WTKRINHPSELVNIGDKVEVVVLNINKEKQEISLGMKQTQINPWDQVA-----------VKYPPNTE----------IEGTVRNLTNYGAFIEIEEGIDGLLHISDMSWTRKIGHPNELLQKGERIRCQVLSVDQERKRIALGLKQLREDP-------WENDIPKRY--QPNQMVTGKVTKLTNFGVFVELEPGLEGLLHISELSDQKVESPDDVVQLGQEIEVRVLRVDRNERKIGLSLKKPPS-DEVAGAELGERQL 556
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A3E0NAW3_9BACT (30S ribosomal protein S1 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0NAW3_9BACT) HSP 1 Score: 187 bits (474), Expect = 3.310e-49 Identity = 123/423 (29.08%), Postives = 214/423 (50.59%), Query Frame = 1
Query: 58 VGQVVDVRIREVDEKLGRINMSLLPYGEGEEVKTSPQVTKDVSHLVGSDPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDH-VSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLS 1323
+G+ + ++ ++D+ I +S E E K + K++ + + RKG + + D+G FV++ G+DGLLH++ M + G+ E + QE+EV++L ++ K++L + T + E E L GTVV++M+YGAFVKLEEG++G+VHIS+M RI+ V IGD + V ++ + I L M+ P K E++ E ++G V ++TN+GAF+ ++E DGLLH+S ++ +S+ + L+ GQ+I +VI VD R+ L +++ + P K P + + G V + +G FV +E ++GL+HISE+A ++++ EDVV+ G+E++V++ V+ D I LS
Sbjct: 174 IGRTIQCKVLKIDDARRNIVVSRRSLIEDERKKQKDNLLKEL------EVGQLRKGVVKNIADFGAFVDLGGLDGLLHITDMSWGRI--------------GHPSEMVNIDQEIEVQVLHIDYEKEKIALGLKQKTPSPWAAAIEKYPVGERLKGTVVNVMSYGAFVKLEEGIEGLVHISEMS-WTRRINHPSELVAIGDEIDVVVLGINQEKEEISLGMKQTQSNPWD------------------KVAEQY---PPESMVKGVVRNLTNYGAFIEIEEGIDGLLHVSDMSWTRKISHPSEMLEKGQEIDCKVISVDQQRRRIALGLKQLSED-PWANDIPSKYQ--------PGQIVKGTVTKLTNFGVFVGLENGLEGLLHISELADDKIENPEDVVKEGEEIEVKVLRVDTDERKIGLS 545
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A7X7MGL5_9BACT (S1 RNA-binding domain-containing protein n=1 Tax=Oligosphaeraceae bacterium TaxID=2699751 RepID=A0A7X7MGL5_9BACT) HSP 1 Score: 182 bits (461), Expect = 5.250e-49 Identity = 120/392 (30.61%), Postives = 211/392 (53.83%), Query Frame = 1
Query: 205 PAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLP------DTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDH-VSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLSMVPPGSYDNEGG 1359
P + R+G + + ++G FV++DG+DGLLH++ M + VSD HE G E+EV IL+++ ++SL + DT DV + K + G VV++M YGAF++LEEG++G+VH+S+M ++I + +Q+G+ V I+ + + R+I L +R P + +K E+F + I+G V ++T +GAFV + +D DG++H+S ++ ++N + LQ G +++ ++EVD DN R+ LSM++ + + R +G + + G++ + +GAFV +EG IDGL+HISE++ RV+ +DVVQ+G V+ R+ +++++ I LSM + E G
Sbjct: 11 PKQIRRGVVKNITEFGAFVDLDGMDGLLHITDM-------SWGRVSDP-------HEIVKVGDEIEVMILDIDKERQRVSLGLKQKEGNPWDTVDVKYPKNTRIH------GKVVNVMPYGAFIELEEGIEGLVHVSEMS-WTKKITRASDMLQVGEEVDAVILNVNKDDRKISLGLRQAQANP----------------WEVIK--ERFPSGTR---IKGKVRNMTGYGAFVQIQDDIDGMIHVSDMSWTRKINNPNEVLQKGMEVEAVILEVDADNQRISLSMKQLTEDPWQNIQNR------YAIG----DSVEGKITKLASFGAFVELEGGIDGLIHISELSEERVNRVKDVVQVGDVVKARVKNISLEERRIGLSMKENVEFHQESG 350
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A3M1RCY3_9BACT (30S ribosomal protein S1 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1RCY3_9BACT) HSP 1 Score: 186 bits (473), Expect = 7.320e-49 Identity = 127/388 (32.73%), Postives = 208/388 (53.61%), Query Frame = 1
Query: 175 KDVSHLVGSDPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDT----EDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDH-VSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLS 1323
K L +P + RKG + + D+G FV++ G+DGLLH++ M + G+ E S E+EV IL+VN K++L + T EDV+ KY S + GTVV++M YGAFVKLE+G++G+VHIS+M +RI+ VQ+GD + V ++ D + I L ++ P ++ EK+ + S ++G V ++TN+GAF+ ++E DGLLH+S ++ +S+ + LQ GQ+I+ RV+ VD + R+ L +++ + + D+ P + + G V I +G FV +E ++GL+HISE+A +VDS E+VV++G+E++V+I V+ D I LS
Sbjct: 207 KKAKLLAELEPGQIRKGVVKNIADFGAFVDLGGLDGLLHITDMSWGRI--------------GHPSEMVSIDDEIEVVILDVNREKEKVALGLKQKTPSPWEDVEV-KYPVGSR---VKGTVVNVMTYGAFVKLEDGIEGLVHISEMS-WTKRINHPTEVVQVGDEIEVVVLRIDKEKQEISLGIKQTQENPWD------------------RAAEKYPEGSI---VKGVVRNLTNYGAFIELEEGIDGLLHVSDMSWTRKISHPSEILQRGQEIECRVLSVDQNRHRIALGLKQLTEDP-------WEHDIPQRYA--PGQIVKGTVTKITNFGVFVGLEDGLEGLLHISELADHKVDSPEEVVKVGEEIEVKILRVDTDERKIGLS 545
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A3L7RGE8_9BACT (30S ribosomal protein S1 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7RGE8_9BACT) HSP 1 Score: 186 bits (471), Expect = 7.440e-49 Identity = 125/424 (29.48%), Postives = 219/424 (51.65%), Query Frame = 1
Query: 58 VGQVVDVRIREVDEKLGRINMSLLPYGEGEEVKTSPQVTKDVSHLVGS-DPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDH-VSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLS 1323
+G+VV + ++DE I +S E Q +D HL+ + + RKG + + D+G FV++ G+DGLLH++ M E + G+ E + QE+EV+IL+++ K++L + + + E + G VV++M+YGAFVKLE G++G+VHIS+M RI+ VQIGD + VRI+ D +++ L ++ P + + +AE + G V ++TN+GAF+ ++E DGLLH+S ++ +S+ + LQ GQ I+ RV+ VD R+ L M++ + S+ P + ++G+V I +G FV +E N++GL+HISE++ ++++ E++V++G E++V++ V+ D I LS
Sbjct: 175 IGRVVQCEVLKIDEARRNIVVSRRSLIE-------KQREEDREHLMAELEIGQIRKGVVKNIADFGAFVDLGGIDGLLHITDMSWERI--------------GHPTEMVAIDQEIEVKILQIDREKQKIALGLKQKQNNPWTNIAEKFPVGSTVPGEVVNVMSYGAFVKLEPGIEGLVHISEMS-WTRRINHPSEMVQIGDKIDVRILGVDPQGQQLSLGIKQTQANP-------------------WDDILQRYPENAE--VAGKVRNLTNYGAFIELEEGIDGLLHVSDMSWTRKISHPSEVLQKGQQIKCRVLSVDQTRRRIALGMKQLDDDP---------WNTSIPEKYKPGQLVSGKVTKITNFGVFVGLEDNLEGLLHISELSDNKIENPEEIVKVGDEIEVKVLRVDSDERKIGLS 546
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A7X8UMT8_9BACT (30S ribosomal protein S1 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X8UMT8_9BACT) HSP 1 Score: 184 bits (466), Expect = 5.420e-48 Identity = 130/424 (30.66%), Postives = 220/424 (51.89%), Query Frame = 1
Query: 58 VGQVVDVRIREVDEKLGRINMSLLPYGEGEEVKTSPQVTKDVSHLVGSDPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDH-VSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLSM 1326
+GQ +D +I ++D++ I +S E + + ++ + RKG + + D+G FV++ G+DGLLH++ M + G+ E S GQE+EV +L V+ K+SL + +E+ L G VV++M+YGAFV+LEEG++G+VHIS+M RI+ V +GD V V ++E D + + I L M+ + P VK EK+ + I GTV ++TN+GAFV ++E DGLLH+S ++ V + + L+ GQ++Q V+ VD + R+ L +++ + R D L P + + G+V I +G FV +E ++GL+H+SE+A +V++ +DVV++G E++V+I V+ D+ I LS+
Sbjct: 170 IGQRIDAKILKIDQERRNIVVSRRKLIEERRAEAKHDLLNEIIE------GQSRKGIVKNLADFGAFVDLGGLDGLLHITDMSWGRI--------------GHPSEMLSIGQEIEVVVLSVDRDKEKISLGLKQKSENPWDQVEAKFPASTRLKGKVVNIMSYGAFVQLEEGLEGLVHISEMS-WTRRINHPSEVVNVGDEVEVIVLEVDRDKQEISLGMKQAETNP----------------WTLVK--EKYPPGTV---ITGTVRNMTNYGAFVEIEEGIDGLLHVSDLSWTRKVGHPSEVLKKGQELQCVVLAVDEEKMRVALGLKQLTEDP----WLRQIPDHYL-----PGQIVCGKVTKITNFGVFVELEDELEGLLHVSELADHKVENPKDVVKVGDEIEVKILRVDSDDRKIGLSL 542 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig51982.12479.1 >prot_H-elongata_contig51982.12479.1 ID=prot_H-elongata_contig51982.12479.1|Name=mRNA_H-elongata_contig51982.12479.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=460bp MSPVGEHVGEVTDVLSVGQVVDVRIREVDEKLGRINMSLLPYGEGEEVKTback to top mRNA from alignment at H-elongata_contig51982:302..3647- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig51982.12479.1 ID=mRNA_H-elongata_contig51982.12479.1|Name=mRNA_H-elongata_contig51982.12479.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3346bp|location=Sequence derived from alignment at H-elongata_contig51982:302..3647- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig51982:302..3647- >mRNA_H-elongata_contig51982.12479.1 ID=mRNA_H-elongata_contig51982.12479.1|Name=mRNA_H-elongata_contig51982.12479.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2760bp|location=Sequence derived from alignment at H-elongata_contig51982:302..3647- (Himanthalia elongata Himel1 dioecious)back to top |