mRNA_H-elongata_contig51968.12478.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig51968.12478.1
Unique NamemRNA_H-elongata_contig51968.12478.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig51968.12478.1 vs. uniprot
Match: A0A6H5LR46_9PHAE (Sec15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LR46_9PHAE)

HSP 1 Score: 559 bits (1441), Expect = 1.110e-190
Identity = 293/383 (76.50%), Postives = 327/383 (85.38%), Query Frame = 1 
Query:    1 QVKETVLALVSLMRDLKMDTHVLMNLVRALKDPFRKLVLLAFEGECRRIVQGETYQPLEIQSREEFDTLIVPMGLDKVDK-GTVGHEDHDASSSFMDVIDDSFYFGVVEEDEDEDDSLRFPTTYPFSATVPHIGLALLKMSALMVTFLSHLDVPNASTLVLKNLQKGTAVVQGLMLEQLHDAENDMHILKASQISVNSAYLAKLPTFLSSSLWDVLVGMQFADVAWKDKDGRAGGMGPEGYSTSGKILDDISDRSRDLIFELVRSKADDLLAGMEFVNWEPTSMRRQPHQYADDLINYLRVTFMNLATLPTSIRQAVHFTCMTHVCNAVLEYATSPKVQTLNVLGIHNVSLDVAALTDFADESGIATLRECFAKLAQLVDIIL 1146
            QVKETVLALVS+M DLKMDTHVLMNLVRALKDPFRKLVL  FE + RRIVQGETYQPL++++RE F+TLI PMGLD+ D  G     D+   S FMDVIDDSFYFGV E++    +   FP TYPFSATVPHIGLALLKMSAL+VTFL++LDVPNAS+LV K++ +GT VVQ LMLEQL DAE DMHILKASQISVNSAYLAKLP FL+S+L D+L GMQFAD AWK K  +A G G E   T+GK+L+DISDRSRDLIFELVRSKADDLLAGMEFVN EPTSMRRQ H YADDLINYLRVTFMNLATLP SIR+AVHFTCMTHVCNA+LE+ T   V+T+NVLGIHNVSLD+AALTDFADESGI+TLRECFAKL QLVDI+L
Sbjct:  438 QVKETVLALVSIMHDLKMDTHVLMNLVRALKDPFRKLVLTEFEADIRRIVQGETYQPLDVETRESFETLIAPMGLDQTDDTGPQEVPDNGDPSRFMDVIDDSFYFGVEEDEGGVHEPDSFPVTYPFSATVPHIGLALLKMSALVVTFLANLDVPNASSLVFKSVHRGTLVVQTLMLEQLRDAEADMHILKASQISVNSAYLAKLPLFLASALGDILAGMQFADFAWKGKGAKADGTGKEMIGTAGKVLEDISDRSRDLIFELVRSKADDLLAGMEFVNMEPTSMRRQAHSYADDLINYLRVTFMNLATLPASIREAVHFTCMTHVCNAILEHITGADVRTVNVLGIHNVSLDIAALTDFADESGISTLRECFAKLLQLVDIVL 820
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BLAST of mRNA_H-elongata_contig51968.12478.1 vs. uniprot
Match: A0A835YRQ1_9STRA (Exocyst complex component 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRQ1_9STRA)

HSP 1 Score: 318 bits (815), Expect = 1.350e-98
Identity = 182/382 (47.64%), Postives = 241/382 (63.09%), Query Frame = 1 
Query:    1 QVKETVLALVSLMRDLKMDTHVLMNLVRALKDPFRKLVLLAFEGECRRIVQGETYQPLEIQSREEFDTLIVPMGLDKVDKGTVGHEDHDASSSFMDVIDDSFYFGVVEEDEDEDDSLRFPTTYPFSATVPHIGLALLKMSALMVTFLSHLDVPNASTLVLKNLQKGTAVVQGLMLEQLHDAENDMHILKASQISVNSAYLAKLPTFLSSSLWDVLVGMQFADVAWKDKDGRAGGMGPEGYSTSGKILDDISDRSRDLIFELVRSKADDLLAGMEFVNWEPTSMRRQPHQYADDLINYLRVTFMNLATLPTSIRQAVHFTCMTHVCNAVLEYATSPKVQTLNVLGIHNVSLDVAALTDFADESGIATLRECFAKLAQLVDIIL 1146
            Q+KET+LA+  L  DL +D   LM L+R LKDP++KL+LLAFEGECRRI+Q E++QPLEI S  E   L                         M V  +  + G V      +     P        +P +G ALLK+S LMV FLSH+D  +A   V + +++GTAVV+ +MLE L +AE D HILKA+QIS NS Y AKLP  L+S +++ L  +QFA+    DK+            +S + L+ I DR+RDLIFELVR KAD LLAGMEFV WEP +MR+  H Y DDLI+YLRVTFMNL++L +++R A HF CM H+C+ +LE    P+  ++N+LG+ N+S DVAAL  F +ESGIA L +CF KL+QL+DIIL
Sbjct:  342 QLKETLLAMAKLASDLDLDCRPLMELLRKLKDPYQKLLLLAFEGECRRILQEESFQPLEIVSEAEVSAL-----------------------RLMTVTSEGLHEGRVRVRGGSEQRHVTPL-------MPELGFALLKLSGLMVAFLSHVDARSAGAAVFQTMERGTAVVRQVMLELLQNAEADSHILKAAQISANSGYAAKLPPHLASVMYECLAALQFAE----DKE-----TSLRSLDSSSRALEGIGDRARDLIFELVRHKADQLLAGMEFVKWEPVAMRQTAHPYCDDLIDYLRVTFMNLSSLTSTMRDAAHFACMLHICDFMLEELLGPRCASVNILGLLNLSRDVAALVAFCEESGIAGLSDCFHKLSQLLDIIL 684
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BLAST of mRNA_H-elongata_contig51968.12478.1 vs. uniprot
Match: A0A7S2S5U8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5U8_9STRA)

HSP 1 Score: 134 bits (338), Expect = 9.130e-31
Identity = 100/278 (35.97%), Postives = 150/278 (53.96%), Query Frame = 1 
Query:  352 RFPTTYPFSATVPHIGLALLKMSALMVTFLSHLDVPNASTLVLKNLQKGTAVVQGLMLEQLHDAENDMHILKASQISVNSAYLAKLPTFLSSSLWDVLVGMQFAD-----VAWKDKDGRAGGMGPEGYST--------SGKILDDISDRSRDLIFELVRSKADDLLAGMEFVNWEPTSMRRQPHQYADDLINYLRVTFMNLATLPTSIRQAVHFTCMTHVCNAVLEYATSPKVQTLNVLGIHNVSLDVAALTDFADESGIATLRECFAKLAQLVDIIL 1146
            R+P T+PFS  VP    AL +  +L   +   L +P+   ++   L      +  +ML +L D E  + I +A+Q+S+++  LA L   L+  L   +V            + + +D   G +  +  ST        S K  +  +DR++DLIFELVR KAD+LL+    +NWEP+S  +      +D+I+YLRVTFM L  LP +IR+AVHF   +HV +A L  A     + LN LG+ N+ LD+ AL  FADE G+  LR  F+ L QL+D +L
Sbjct:  580 RYPLTFPFSLAVPKCCRALHRFLSLAFAYAHGLSIPSLPMILRGALGDALTSLNEVMLTRLGDEE--ISIGQATQLSLDARALAHLVPRLAQVLEQGIVAANAVGELPVAASGEGEDEHLGDV--QNLSTEVQQLLAKSQKQFEGTADRAQDLIFELVRIKADELLS-FGLMNWEPSSPAQSSRPEVEDVISYLRVTFMCLTYLPATIREAVHFASCSHV-HATLRSALEAPTR-LNGLGLVNLRLDIQALESFADECGVPDLRIVFSPLHQLLDAVL 850
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BLAST of mRNA_H-elongata_contig51968.12478.1 vs. uniprot
Match: A0A812WKI0_SYMMI (SEC15A protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WKI0_SYMMI)

HSP 1 Score: 122 bits (307), Expect = 2.760e-29
Identity = 55/136 (40.44%), Postives = 95/136 (69.85%), Query Frame = 1 
Query:  739 LDDISDRSRDLIFELVRSKADDLLAGMEFVNWEPTSMRRQPHQYADDLINYLRVTFMNLATLPTSIRQAVHFTCMTHVCNAVLEYATSPKVQTLNVLGIHNVSLDVAALTDFADESGIATLRECFAKLAQLVDIIL 1146
            ++ ++++S+D++FEL+ +K  DLL  M FVNW P+ +   PH++ +++++YLRVTFM L+ LP ++R+A HFTC + +   ++ +  SPKV  LN+L +  + LD +AL  +AD  GI+ LRECF++   LV+ ++
Sbjct:   26 MEQLANQSQDMVFELLNAKVVDLLGSMCFVNWVPSVLPSGPHEFVEEVVDYLRVTFMCLSHLPQTVREAAHFTCCSRINREIILFLLSPKVPHLNLLSVKALVLDFSALEKYADSCGISQLRECFSEGKALVNAMI 161
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BLAST of mRNA_H-elongata_contig51968.12478.1 vs. uniprot
Match: A0A2P6N3P8_9EUKA (Exocyst complex component n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N3P8_9EUKA)

HSP 1 Score: 60.5 bits (145), Expect = 3.250e-6
Identity = 33/138 (23.91%), Postives = 68/138 (49.28%), Query Frame = 1 
Query:  745 DISDRSRDLIFELVRSKADDLLAGM--EFVNWEPTSMRRQPHQYADDLINYLRVTFMNLATLPTSIRQAVHFTCMTHVCNAVLE--YATSPKVQTLNVLGIHNVSLDVAALTDFADESGIATLRECFAKLAQLVDIIL 1146
            + S +   ++ ELV +K  + +  M  +   W P+S++ +P  YA  +IN+L       A LP  I+ ++ F  +  +   ++   Y    +V   N   +  +  D+  +  +++ S I T ++  A+L QL+D++L
Sbjct:  614 EFSSQIEAMLLELVENKVQEFVVAMKQQLPPWTPSSIKNEPRDYAQQMINWLDQNNQIWAILPKDIQSSLQFRALHKISYGIVRQGYIGGDEVFRFNSNALRAIDCDLRFMESYSERSNIPTSQDAMAELRQLIDLLL 751
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BLAST of mRNA_H-elongata_contig51968.12478.1 vs. uniprot
Match: A0A7S2UVL1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVL1_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 3.590e-6
Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 1 
Query: 1009 VQTLNVLGIHNVSLDVAALTDFADESGIATLRECFAKLAQLVDIIL 1146
            V ++N+ GIHN+ +DV  L DFAD+SGI  LRECF  L  L D IL
Sbjct:    1 VDSMNIFGIHNLGVDVKFLEDFADDSGIPQLRECFLPLRTLCDAIL 46
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BLAST of mRNA_H-elongata_contig51968.12478.1 vs. uniprot
Match: L1IVC9_GUITC (Sec15 protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IVC9_GUITC)

HSP 1 Score: 58.5 bits (140), Expect = 1.340e-5
Identity = 86/372 (23.12%), Postives = 149/372 (40.05%), Query Frame = 1 
Query:  109 LVLLAFEG---ECRRIVQGETYQPLEIQSREEFDTLIVPMGLDKVDKGTVGHEDHDASSSFMDVIDDSFYFGVVEEDEDEDDSLRFPTTYPFSATVPHIGLALLKMSALMVTFLSHLDVPNASTLVLKNLQKGTAVVQGLMLEQLHDAENDMHILKASQ-ISVNSAYLAKLPTFLSSSLWDVL---VGMQFADVAWKDKDGRAGGMG-PEGYSTSGKILDDISDRSRDLIFELVRSKADD----------------LLAGMEFVNWEPTSMRR--QPHQYADDLINYLRVTFMNLATLPTSIRQAVHFTCMTHVCNAVLEYATSPKVQTLNVLGIHNVSLDVAALTDFADESGIATLRECFAKLAQLVDIIL 1146
            LVLLA E    + RR+++ +++ PL ++S  +++ L+V   L   +  +   E+  AS  F  V                        T  FS +VP     LL++   +   LS      AS  +   L++   V+   M   LH        ++  Q + +N A    + T + S   + L   VG  +  +A  +K   AG     +    S +        + DL+F  V +K  D                +  G+   +W P+SM++  QP  Y  DL+ YL               QA+H+     +   + +   S  V+ +       +  D+ AL  FA ES ++ L++CFA L QLV++++
Sbjct:  471 LVLLAEEESREDARRVIENDSHDPLRVESPTDYERLVVDHQLTHFEMSS---EESKASKKFKTV------------------------TMSFSRSVPR----LLQICKNLAFDLSSFTDQAASDPLETFLRE---VLSEEMTRPLHPYIEAGAAMRGGQKVPINLALQICVNTEVVSQSCEQLMSYVGSLYLHLAPSEKSAVAGIKTIQQRVERSSEAFQRARSGAEDLLFSAVMAKVVDGRGSADVADWGQVNEIMDRGVAEFDWAPSSMKQMDQPSDYILDLVAYL---------------QALHYKAFNAIAQRLYQQPLSSSVKKIFFNAFQKLDKDLHALEAFAIESKVSGLKDCFAPLRQLVNLLV 793
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51968.12478.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5LR46_9PHAE1.110e-19076.50Sec15 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835YRQ1_9STRA1.350e-9847.64Exocyst complex component 6 n=1 Tax=Tribonema minu... [more]
A0A7S2S5U8_9STRA9.130e-3135.97Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A812WKI0_SYMMI2.760e-2940.44SEC15A protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A2P6N3P8_9EUKA3.250e-623.91Exocyst complex component n=1 Tax=Planoprotosteliu... [more]
A0A7S2UVL1_9STRA3.590e-656.52Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
L1IVC9_GUITC1.340e-523.12Sec15 protein n=1 Tax=Guillardia theta (strain CCM... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51968contigH-elongata_contig51968:352..3880 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score554.3
Seed ortholog evalue4.5e-155
Seed eggNOG ortholog2880.D7G8J1
Preferred nameEXOC6
KEGG koko:K19985
GOsGO:0000003,GO:0000145,GO:0000902,GO:0000904,GO:0001505,GO:0001667,GO:0002064,GO:0002065,GO:0002066,GO:0002262,GO:0002376,GO:0002520,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005829,GO:0005886,GO:0005911,GO:0005938,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006903,GO:0006904,GO:0006928,GO:0006935,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007399,GO:0007409,GO:0007411,GO:0007423,GO:0008037,GO:0008104,GO:0008150,GO:0009314,GO:0009416,GO:0009453,GO:0009506,GO:0009605,GO:0009628,GO:0009653,GO:0009826,GO:0009846,GO:0009856,GO:0009860,GO:0009875,GO:0009888,GO:0009932,GO:0009987,GO:0010631,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016049,GO:0016079,GO:0016080,GO:0016081,GO:0016192,GO:0016197,GO:0016477,GO:0017016,GO:0017137,GO:0017156,GO:0019899,GO:0019953,GO:0022008,GO:0022406,GO:0022412,GO:0022414,GO:0022416,GO:0023052,GO:0023061,GO:0030030,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030182,GO:0030218,GO:0030424,GO:0030707,GO:0030855,GO:0031175,GO:0031267,GO:0031410,GO:0031982,GO:0032456,GO:0032501,GO:0032502,GO:0032504,GO:0032940,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033267,GO:0034101,GO:0034613,GO:0040007,GO:0040011,GO:0042221,GO:0042330,GO:0042331,GO:0042592,GO:0042886,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043230,GO:0043679,GO:0044306,GO:0044421,GO:0044424,GO:0044444,GO:0044448,GO:0044456,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0045055,GO:0045184,GO:0045202,GO:0046903,GO:0046907,GO:0048278,GO:0048468,GO:0048477,GO:0048489,GO:0048513,GO:0048534,GO:0048544,GO:0048588,GO:0048589,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048868,GO:0048869,GO:0048870,GO:0048872,GO:0050896,GO:0051020,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051674,GO:0051704,GO:0055037,GO:0055044,GO:0060321,GO:0060429,GO:0060560,GO:0061564,GO:0065007,GO:0065008,GO:0070062,GO:0070177,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0090130,GO:0090132,GO:0090522,GO:0097458,GO:0097479,GO:0097480,GO:0097485,GO:0097708,GO:0098793,GO:0098916,GO:0099003,GO:0099022,GO:0099023,GO:0099504,GO:0099536,GO:0099537,GO:0099568,GO:0099643,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:0140029,GO:0140056,GO:0150034,GO:1903561,GO:1990778
EggNOG free text desc.vesicle docking involved in exocytosis
EggNOG OGsKOG2176@1,KOG2176@2759
Ec32 ortholog descriptionExocyst complex subunit Sec15-like
Ec32 orthologEc-14_003200.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Exons6
Model size1152
Cds size1152
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51968.12478.1prot_H-elongata_contig51968.12478.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig51968 352..3880 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930849.4721951-CDS-H-elongata_contig51968:351..4951622930849.4721951-CDS-H-elongata_contig51968:351..495Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51968 352..495 -
1691679596.7568643-CDS-H-elongata_contig51968:351..4951691679596.7568643-CDS-H-elongata_contig51968:351..495Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51968 352..495 -
1622930849.4889917-CDS-H-elongata_contig51968:1071..13441622930849.4889917-CDS-H-elongata_contig51968:1071..1344Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51968 1072..1344 -
1691679596.771664-CDS-H-elongata_contig51968:1071..13441691679596.771664-CDS-H-elongata_contig51968:1071..1344Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51968 1072..1344 -
1622930849.5195427-CDS-H-elongata_contig51968:1737..18781622930849.5195427-CDS-H-elongata_contig51968:1737..1878Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51968 1738..1878 -
1691679596.7836432-CDS-H-elongata_contig51968:1737..18781691679596.7836432-CDS-H-elongata_contig51968:1737..1878Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51968 1738..1878 -
1622930849.5380168-CDS-H-elongata_contig51968:2397..25771622930849.5380168-CDS-H-elongata_contig51968:2397..2577Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51968 2398..2577 -
1691679596.793362-CDS-H-elongata_contig51968:2397..25771691679596.793362-CDS-H-elongata_contig51968:2397..2577Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51968 2398..2577 -
1622930849.5513432-CDS-H-elongata_contig51968:3053..32841622930849.5513432-CDS-H-elongata_contig51968:3053..3284Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51968 3054..3284 -
1691679596.8067033-CDS-H-elongata_contig51968:3053..32841691679596.8067033-CDS-H-elongata_contig51968:3053..3284Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51968 3054..3284 -
1622930849.5653489-CDS-H-elongata_contig51968:3697..38801622930849.5653489-CDS-H-elongata_contig51968:3697..3880Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51968 3698..3880 -
1691679596.817158-CDS-H-elongata_contig51968:3697..38801691679596.817158-CDS-H-elongata_contig51968:3697..3880Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51968 3698..3880 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig51968.12478.1

>prot_H-elongata_contig51968.12478.1 ID=prot_H-elongata_contig51968.12478.1|Name=mRNA_H-elongata_contig51968.12478.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=384bp
QVKETVLALVSLMRDLKMDTHVLMNLVRALKDPFRKLVLLAFEGECRRIV
QGETYQPLEIQSREEFDTLIVPMGLDKVDKGTVGHEDHDASSSFMDVIDD
SFYFGVVEEDEDEDDSLRFPTTYPFSATVPHIGLALLKMSALMVTFLSHL
DVPNASTLVLKNLQKGTAVVQGLMLEQLHDAENDMHILKASQISVNSAYL
AKLPTFLSSSLWDVLVGMQFADVAWKDKDGRAGGMGPEGYSTSGKILDDI
SDRSRDLIFELVRSKADDLLAGMEFVNWEPTSMRRQPHQYADDLINYLRV
TFMNLATLPTSIRQAVHFTCMTHVCNAVLEYATSPKVQTLNVLGIHNVSL
DVAALTDFADESGIATLRECFAKLAQLVDIILK*
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mRNA from alignment at H-elongata_contig51968:352..3880-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig51968.12478.1 ID=mRNA_H-elongata_contig51968.12478.1|Name=mRNA_H-elongata_contig51968.12478.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3529bp|location=Sequence derived from alignment at H-elongata_contig51968:352..3880- (Himanthalia elongata Himel1 dioecious)
CAGGTGAAGGAAACGGTGCTGGCGCTGGTGTCCCTCATGCGCGACCTGAA
GATGGATACGCACGTCCTCATGAACCTCGTGCGGGCTCTCAAGGATCCCT
TCCGGAAGCTAGTCCTCCTGGCCTTCGAGGGAGAGTGCCGGCGCATCGTG
CAGGGCGAGACGTACCAACCGCTCGAAATACAGGTACAATGCTTCACACT
AGCACGACGCTGTTCGATTTTCTCCTCGGGGTGTGGAAAAGGCTGCGGGC
GTCTAGCCGTTCCAGCTCTCTTCGTTCGACCGTCGTCCAATCCTATAGTC
TATTTGAACGATGGATCCACTGCCTGAGACTATCGTAGCACAATATCAGG
TTGTTGGGGGGGGAGTCACCAGCTTGGCCAAGTCCTACCAGTACATTACA
CCAAGTTGTGGGGATAGTACAGTGCTTGCGTATTTCATATAAACCTGCAA
GACAGTAAAGTGCAGTAGCTTGCTCACCACCGCCGTAGAACACGGCCCAT
CCTCAAACACGCCACGTGGTGCTGCGTTTCGCGCATTATCTTGGACTTAC
GCGCGCATTGTTGTTCGCGACGGGGGGCGGGGGGCGGGGGGCGAAGTCGC
GGGAGGAATTCGATACCTTGATTGTTCCGATGGGCCTCGATAAGGTTGAT
AAGGGCACCGTCGGCCATGAGGACCACGATGCGTCGTCTTCCTTCATGGA
CGTGATCGACGACTCCTTCTACTTCGGGGTGGTGGAGGAGGACGAAGACG
AGGATGACTCTCTGCGATTCCCAACGACTTATCCGTTCTCCGCTACCGTA
CCTCACATCGGTCTGGCACTACTCAAGGTGGGATCATCATAAACGGGGGA
AGGATGGGGTCGCAATCGTCCCTCCCGTTCTGTTGATCGGTGCCCCCGAT
AGTCGAACGACATACCATGCGAGTTTGTCGAAAAGTAGAAAATGAGATAA
GTTGGCGCCTTGAACGAGGAACAAGCAGAGGCGCGGCGAGAAAGCGGTCT
TCCTTATTTCTTGTGTGTGGGAGGAGGTAGGGGATGGGAAGCGGGGGGCA
TCGGCGCCCAGCTATATCGCGATTTCGATCTTATCGCTCTCGAGGCGTAG
CGACGATCGGTGGGCTAAAAACCGCCTCGGTCCCGGGTAGAGTAACTAAA
AAGCGAGCGTCTCCCCCTAGAAAAACCGCGCGCGCTTTTTCTCTCCATCC
GTGCGTCCCTCCGTCTATCTAGCCAATCCAATCTCCGGATGTCCTTGTGT
GTGATTTTCCTCCCCCCTCTCCACCCACCCCTTGTGGATGCTGCGCGGTA
CAGATGTCGGCCCTGATGGTGACGTTTCTGTCGCACCTGGACGTGCCCAA
CGCGAGTACGCTGGTCCTGAAGAATCTGCAGAAAGGCACCGCAGTGGTGC
AGGGGTTAATGCTGGAGCAGCTTCACGACGCGGAGAATGACATGCACATC
CTCAAGGCCAGCCAAATATCTGTCAATAGCGCGGTGAGCGAGAAAGAGGG
CTTTGTGCGCGCATTAAATTTCATTTTTTATTTCCTTATTTATTTATTTA
TTTATTTATTTATTTAAGCTTCCCTTGTTTTCCCTCTTTTTCTGAGAGGA
TGGGCGTGTGCGAAAGCAACCGCTTATCCGGACGCAGACAAGCGACGAAT
ATCTTGTGGCGAATTGTTGGGGAGAGGGGGTTAACAGAAAGATTCGATAT
CGTCACAAACAAGCTTCGAGGAGTAGCTGCTTCCGTTGGGTGGTGGTTTT
ACATCATGACAGCGCTTGTTTAACGCATCCCTTTTTCTGCGCTTGTGATT
GACCCTCCACCCTCGCGGTCGGTCGGTCGATTGGTCGGTCACACTTGACT
TAACTTGATTGGACTTGACTTGGCCAACCTTCAACAGTCCCACGGTTGCA
GAGACCTCGTTGCCTCACGCCGCCCTCCCCGCATTTCCCCCCCTTTCTTC
CCCCGCCACTGTCACCACCTTCCTGATTATGTGGAAACCTCATTCTTTTC
AGTACCTGGCGAAGCTGCCCACCTTCCTTTCCTCGTCTCTGTGGGACGTC
TTGGTGGGGATGCAGTTCGCCGATGTGGCCTGGAAGGACAAGGATGGCCG
GGCAGGAGGGATGGGACCAGAGGGGTACAGCACGTCGGGAAAGGTACGAT
TTTGTTACACCCTCTGCAGTGGTCAACCTTGGCCACAGTCGGTCTGTCTT
CGTTCTAAAACACTAGTGATTGGGATCCATTTCCTGGCGCTTGTGGTGGG
CCTCGTTGAAAGAACGGCGGCCTCACAGTCTTTGACCCGAACTCGTGGTG
ACGTCACCTCTCCTTTGACTTCAAGGTATCTTTTCCAAAAAAAGCGTCCG
TGGAATCAATTGGAAACATGACGTACCCTTTGGAAGTCGATGTCGTCCGA
ATCCTTCAAGACTTGCGCCTTTACACCCCTTCTTCCCCCCCATTCCCTGC
CTCCCTCCCTCCCTTTCTTATTTTCTCCTGTCCCCTCGTTCATTGGCCTC
CTCGTTTTGAAAACCCGTCCGCGGTTTCGACTGAAGATTCTGGATGATAT
TAGCGACCGCTCTCGCGATCTGATTTTCGAGCTTGTTCGCAGCAAGGCCG
ACGACCTTCTGGCCGGCATGGAGTTCGTCAACTGGGAGCCGACGTCCATG
CGCCGGCAGCCCCACCAGTATGCTGACGACCTGATCAACTACCTGCGCGT
CACATTCATGAACCTTGCCACCCTGCCGACCAGCATCCGACAGGCCGTGC
ACTTTACGTGCATGACGCACGTCTGCAATGCCGTTCTGGAGTACGCGACC
AGTCCCAAGGTTAGCATTGAAAGAGAACGACATAATGAGGCAAATCTAGT
TGCTCGTCCGGCAAGCCGTTGAGGTTTTCTCGGCAAGGGAGTTCGTGGGC
GATGGGGGCGAGGGGGGGGGGGAAGGGGCACGACTTGAGGCTCGTTTTTT
TGTTTTTTACTTCTAGTTTTAGCCGCTTTGTTTTAGCTGCAGTTTTTGGT
TTCATCTTTAGTTTCAGTCTTTGGTTTTAGATTTGGGTCTTAGATTTTAG
CATTTGGTTTTTGTCTTTGGTTTTTGTCTTTAATTTTCATTTTATTTAGC
TTTAGCTTTTGGTTTTTGATTCGAGTGTTTGGTTTTAGCCTCCGGTATTA
GTTTTCCCTATTATTTTTTAGTTTGTTTTTTCCCACCCGAAATCTCGATG
TTTCCCAGGGGTCGAACCGCATCCATGAGTTCGTGTGTGGCAGTATTCAA
ACGCATATTTAAACATTTTGCCCGTTCGCTGTTTTTTTTTTCCTAGATAC
TAAATACAGTATATTACTTCTTTCGCTCGACTCGTCGTAACCAACCAATT
AACAAACTACCTCGCCTTCTTTCCTTCCGAGGCAGGTGCAAACCCTGAAC
GTCCTTGGAATCCACAACGTGAGCTTGGACGTCGCGGCGCTTACGGACTT
CGCCGACGAGAGCGGGATCGCGACCCTCCGGGAGTGCTTCGCAAAGCTTG
CGCAGCTCGTGGACATTATTCTCAAGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig51968:352..3880-

>mRNA_H-elongata_contig51968.12478.1 ID=mRNA_H-elongata_contig51968.12478.1|Name=mRNA_H-elongata_contig51968.12478.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2304bp|location=Sequence derived from alignment at H-elongata_contig51968:352..3880- (Himanthalia elongata Himel1 dioecious)
CAGGTGAAGGAAACGGTGCTGGCGCTGGTGTCCCTCATGCGCGACCTGAA
GATGGATACGCACGTCCTCATGAACCTCGTGCGGGCTCTCAAGGATCCCT
TCCGGAAGCTAGTCCTCCTGGCCTTCGAGGGAGAGTGCCGGCGCATCGTG
CAGGGCGAGACGTACCAACCGCTCGAAATACAGCAGGTGAAGGAAACGGT
GCTGGCGCTGGTGTCCCTCATGCGCGACCTGAAGATGGATACGCACGTCC
TCATGAACCTCGTGCGGGCTCTCAAGGATCCCTTCCGGAAGCTAGTCCTC
CTGGCCTTCGAGGGAGAGTGCCGGCGCATCGTGCAGGGCGAGACGTACCA
ACCGCTCGAAATACAGTCGCGGGAGGAATTCGATACCTTGATTGTTCCGA
TGGGCCTCGATAAGGTTGATAAGGGCACCGTCGGCCATGAGGACCACGAT
GCGTCGTCTTCCTTCATGGACGTGATCGACGACTCCTTCTACTTCGGGGT
GGTGGAGGAGGACGAAGACGAGGATGACTCTCTGCGATTCCCAACGACTT
ATCCGTTCTCCGCTACCGTACCTCACATCGGTCTGGCACTACTCAAGTCG
CGGGAGGAATTCGATACCTTGATTGTTCCGATGGGCCTCGATAAGGTTGA
TAAGGGCACCGTCGGCCATGAGGACCACGATGCGTCGTCTTCCTTCATGG
ACGTGATCGACGACTCCTTCTACTTCGGGGTGGTGGAGGAGGACGAAGAC
GAGGATGACTCTCTGCGATTCCCAACGACTTATCCGTTCTCCGCTACCGT
ACCTCACATCGGTCTGGCACTACTCAAGATGTCGGCCCTGATGGTGACGT
TTCTGTCGCACCTGGACGTGCCCAACGCGAGTACGCTGGTCCTGAAGAAT
CTGCAGAAAGGCACCGCAGTGGTGCAGGGGTTAATGCTGGAGCAGCTTCA
CGACGCGGAGAATGACATGCACATCCTCAAGGCCAGCCAAATATCTGTCA
ATAGCGCGATGTCGGCCCTGATGGTGACGTTTCTGTCGCACCTGGACGTG
CCCAACGCGAGTACGCTGGTCCTGAAGAATCTGCAGAAAGGCACCGCAGT
GGTGCAGGGGTTAATGCTGGAGCAGCTTCACGACGCGGAGAATGACATGC
ACATCCTCAAGGCCAGCCAAATATCTGTCAATAGCGCGTACCTGGCGAAG
CTGCCCACCTTCCTTTCCTCGTCTCTGTGGGACGTCTTGGTGGGGATGCA
GTTCGCCGATGTGGCCTGGAAGGACAAGGATGGCCGGGCAGGAGGGATGG
GACCAGAGGGGTACAGCACGTCGGGAAAGTACCTGGCGAAGCTGCCCACC
TTCCTTTCCTCGTCTCTGTGGGACGTCTTGGTGGGGATGCAGTTCGCCGA
TGTGGCCTGGAAGGACAAGGATGGCCGGGCAGGAGGGATGGGACCAGAGG
GGTACAGCACGTCGGGAAAGATTCTGGATGATATTAGCGACCGCTCTCGC
GATCTGATTTTCGAGCTTGTTCGCAGCAAGGCCGACGACCTTCTGGCCGG
CATGGAGTTCGTCAACTGGGAGCCGACGTCCATGCGCCGGCAGCCCCACC
AGTATGCTGACGACCTGATCAACTACCTGCGCGTCACATTCATGAACCTT
GCCACCCTGCCGACCAGCATCCGACAGGCCGTGCACTTTACGTGCATGAC
GCACGTCTGCAATGCCGTTCTGGAGTACGCGACCAGTCCCAAGATTCTGG
ATGATATTAGCGACCGCTCTCGCGATCTGATTTTCGAGCTTGTTCGCAGC
AAGGCCGACGACCTTCTGGCCGGCATGGAGTTCGTCAACTGGGAGCCGAC
GTCCATGCGCCGGCAGCCCCACCAGTATGCTGACGACCTGATCAACTACC
TGCGCGTCACATTCATGAACCTTGCCACCCTGCCGACCAGCATCCGACAG
GCCGTGCACTTTACGTGCATGACGCACGTCTGCAATGCCGTTCTGGAGTA
CGCGACCAGTCCCAAGGTGCAAACCCTGAACGTCCTTGGAATCCACAACG
TGAGCTTGGACGTCGCGGCGCTTACGGACTTCGCCGACGAGAGCGGGATC
GCGACCCTCCGGGAGTGCTTCGCAAAGCTTGCGCAGCTCGTGGACATTAT
TCTCAAGTAAGTGCAAACCCTGAACGTCCTTGGAATCCACAACGTGAGCT
TGGACGTCGCGGCGCTTACGGACTTCGCCGACGAGAGCGGGATCGCGACC
CTCCGGGAGTGCTTCGCAAAGCTTGCGCAGCTCGTGGACATTATTCTCAA
GTAA
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