mRNA_H-elongata_contig51927.12475.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: D7FN44_ECTSI (Outer row dynein assembly protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN44_ECTSI) HSP 1 Score: 177 bits (448), Expect = 3.590e-51 Identity = 86/112 (76.79%), Postives = 99/112 (88.39%), Query Frame = 1
Query: 1 TLDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAAGGLSRAQEAEREEMGRIRDAKREAEERQYTAFENV 336
TLD+QHNRINDP+VV +VSAMHDLRVLYL+GNPVVK I HYRKT+VSKC LKYLDDRPVF +ER RC AWS+GMA GG+SRAQEAEREEM +IR++KR AE+RQY AFE +
Sbjct: 90 TLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVKSIRHYRKTLVSKCATLKYLDDRPVFDDERCRCAAWSKGMAEGGISRAQEAEREEMAKIRESKRAAEQRQYLAFEQM 201
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: A0A7S3Y6C6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C6_HETAK) HSP 1 Score: 133 bits (335), Expect = 1.390e-35 Identity = 68/113 (60.18%), Postives = 87/113 (76.99%), Query Frame = 1
Query: 1 TLDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAAGG-LSRAQEAEREEMGRIRDAKREAEERQYTAFENV 336
TLD+QHN+I+D +V VV+ M +LRVLYL+GNPVVK + HYRK++VS C L+YLDDRPVF +ERRR +AW+RG AGG L A AEREE+ R+R+ KR AEER + A E +
Sbjct: 149 TLDIQHNKIDDVGIVDVVTTMPNLRVLYLQGNPVVKDVRHYRKSLVSGCRELRYLDDRPVFEDERRRTDAWARGFRAGGTLDAANAAEREEIRRVREEKRCAEERNFLAMEQM 261
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: A0A8K1CJQ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJQ4_PYTOL) HSP 1 Score: 126 bits (317), Expect = 4.370e-32 Identity = 64/118 (54.24%), Postives = 85/118 (72.03%), Query Frame = 1
Query: 4 LDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAA--GGLSRAQEAEREEMGRIRDAKREAEERQYTAFENVCCQPR 351
LD+Q NRINDP+++++++ M L+VLYL+GN VVKHI YRKT++ +C LKYLDDRPVF EERRR EAW + + A G AQEAEREEM RIR KR+ + + + FE + + R
Sbjct: 141 LDIQSNRINDPKILEILAEMPSLKVLYLQGNDVVKHIKQYRKTMIYRCRKLKYLDDRPVFDEERRRVEAWGQALEAANGDYKAAQEAEREEMDRIRQEKRDRDHQNFLMFEEMMAEGR 258
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: T0QTZ5_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QTZ5_SAPDV) HSP 1 Score: 119 bits (297), Expect = 1.370e-29 Identity = 63/113 (55.75%), Postives = 81/113 (71.68%), Query Frame = 1
Query: 4 LDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAA--GGLSRAQEAEREEMGRIRDAKREAEERQYTAFENV 336
LD+Q NRI D +VV +++AM +LRVLYL+GN VVKHI HYRKTI+S+C L+YLDDRPVF EERRR AW R M G + A EAER E+ IR K++ +E + FE++
Sbjct: 141 LDIQSNRIADVDVVDILAAMPNLRVLYLQGNDVVKHIKHYRKTIISRCKELRYLDDRPVFDEERRRVTAWGRVMEETNGDVDAALEAERAELALIRQEKKDKDEANFRYFEDM 253
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: K3WU80_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU80_GLOUD) HSP 1 Score: 116 bits (291), Expect = 4.880e-29 Identity = 61/118 (51.69%), Postives = 81/118 (68.64%), Query Frame = 1
Query: 4 LDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAA--GGLSRAQEAEREEMGRIRDAKREAEERQYTAFENVCCQPR 351
LD+Q NR+ D +V +++ M +L+VLYL+GN VVKHI YRKT+V +C LKYLDDRPVF +ERRR EAW + + A G AQEAER+EM IR K+E +E + FE + + R
Sbjct: 141 LDIQSNRVTDVNIVDILAQMPELKVLYLQGNDVVKHIKQYRKTLVYRCRKLKYLDDRPVFDDERRRVEAWGKALDASQGDYKAAQEAERDEMDAIRREKKERDELNFLHFEQMMIEGR 258
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: A0A7S0K1K9_CAFRO (Hypothetical protein (Fragment) n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K1K9_CAFRO) HSP 1 Score: 115 bits (288), Expect = 5.690e-29 Identity = 60/109 (55.05%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 4 LDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAAGGLSRAQEAEREEMGRIRDAKREAEERQYTAFE 330
LDL+ N I+DP V+ V++AM LRVLYL+GNPVVK I HYRKT++S+ L++LDDRPVF EER R AW+ GM AGG A ER + + REA+ER + AFE
Sbjct: 144 LDLKGNIIDDPAVLDVLAAMPSLRVLYLQGNPVVKRIRHYRKTVISRLEGLRFLDDRPVFDEERERVTAWAAGMKAGGSKEAAARERATIAAQKQRAREADERNFRAFE 252
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: A0A3L6V2M5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V2M5_9STRA) HSP 1 Score: 114 bits (285), Expect = 5.940e-29 Identity = 59/113 (52.21%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 4 LDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGM--AAGGLSRAQEAEREEMGRIRDAKREAEERQYTAFENV 336
LD+Q NRI DP VV V++ M +LRVLYL+GN VVKHI YRKT+V++C NL+YLDDRPVF +ERRR AW + + G + A +AER+E+ IR K++ +E + FE +
Sbjct: 138 LDIQSNRIADPAVVDVLAQMPNLRVLYLQGNDVVKHIKQYRKTVVARCKNLRYLDDRPVFDDERRRVNAWYKVLENTNGDMDAALQAERDELAVIRQEKKDKDEANFRYFEEI 250
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: F0YSA6_AURAN (Uncharacterized protein (Fragment) n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YSA6_AURAN) HSP 1 Score: 112 bits (280), Expect = 1.470e-28 Identity = 62/119 (52.10%), Postives = 81/119 (68.07%), Query Frame = 1
Query: 1 TLDLQHNRINDPE-VVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAAGG-LSRAQEAEREEMGRIRDAKREAEERQYTAFENVCCQPR 351
TLD+Q N + D E V+ + M DLRVLY +GNP VK + +YRK ++S+ L+YLDDRPVF +ERRRCEAW+RG A GG L A EAER E+ +IR K+ AE+++ FEN R
Sbjct: 57 TLDVQANGLADGEGVLAIFKQMPDLRVLYCQGNPFVKELRNYRKRMISEIKTLRYLDDRPVFEDERRRCEAWARGFAEGGTLDAANEAERAEIAQIRADKKAAEDKRVRDFENFIADAR 175
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: A0A1V9YZD4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZD4_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.900e-28 Identity = 63/113 (55.75%), Postives = 77/113 (68.14%), Query Frame = 1
Query: 4 LDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAA--GGLSRAQEAEREEMGRIRDAKREAEERQYTAFENV 336
LD+Q NRIND VV V++ M +LRVLYL+GN VVKHI YRKTI+ +C L+YLDDRPVF EERRR AW R M G L A EAER E+ IR K++ +E + FE +
Sbjct: 141 LDIQSNRINDATVVDVLAQMTNLRVLYLQGNDVVKHIKQYRKTIIYRCKELRYLDDRPVFDEERRRVTAWGRAMEETNGDLEAALEAERAELAVIRQEKKDKDEANFRYFEEM 253
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: A0A812VQF0_9DINO (DNAAF1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812VQF0_9DINO) HSP 1 Score: 115 bits (288), Expect = 2.410e-28 Identity = 60/109 (55.05%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 4 LDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAAGGLSRAQEAEREEMGRIRDAKREAEERQYTAFE 330
LDL+ N I+DP V+ V++AM LRVLYL+GNPVVK I HYRKT++S+ L++LDDRPVF EER R AW+ GM AGG A ER + + REA+ER + AFE
Sbjct: 208 LDLKGNIIDDPAVLDVLAAMPSLRVLYLQGNPVVKRIRHYRKTVISRLEGLRFLDDRPVFDEERERVTAWAAGMKAGGSKEAAARERATIAAQKQRAREADERNFRAFE 316 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig51927.12475.1 >prot_H-elongata_contig51927.12475.1 ID=prot_H-elongata_contig51927.12475.1|Name=mRNA_H-elongata_contig51927.12475.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp TLDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTback to top mRNA from alignment at H-elongata_contig51927:1118..1641- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig51927.12475.1 ID=mRNA_H-elongata_contig51927.12475.1|Name=mRNA_H-elongata_contig51927.12475.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=524bp|location=Sequence derived from alignment at H-elongata_contig51927:1118..1641- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig51927:1118..1641- >mRNA_H-elongata_contig51927.12475.1 ID=mRNA_H-elongata_contig51927.12475.1|Name=mRNA_H-elongata_contig51927.12475.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=702bp|location=Sequence derived from alignment at H-elongata_contig51927:1118..1641- (Himanthalia elongata Himel1 dioecious)back to top |