mRNA_H-elongata_contig51906.12472.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig51906.12472.1
Unique NamemRNA_H-elongata_contig51906.12472.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig51906.12472.1 vs. uniprot
Match: D7FPA6_ECTSI (Glutamine synthetase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FPA6_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 3.920e-81
Identity = 127/149 (85.23%), Postives = 137/149 (91.95%), Query Frame = 2 
Query:    2 QVGPCVGIKSGDELWVSRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIITAVEKLGKKHEEHIAAYGEGNERRLTGSHETASISQFSYGVANRGASIRIGRDTYREKKGYFEDRRPASNMDPYVVTKMICK 448
            QVGPC GI SGDELW+SRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYS+K MREEGGY  II A+EKLG+KH+EHIAAYGEGNERRLTG HETAS+ +FSYGVANRGASIRIGRD  +E+KGYFEDRRP+SNMDPYVVT MI K
Sbjct:  211 QVGPCEGIASGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 359
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BLAST of mRNA_H-elongata_contig51906.12472.1 vs. uniprot
Match: A0A835YJ88_9STRA (Glutamine synthetase n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ88_9STRA)

HSP 1 Score: 266 bits (680), Expect = 1.680e-79
Identity = 128/154 (83.12%), Postives = 136/154 (88.31%), Query Frame = 2 
Query:    2 QVGPCVGIKSGDELWVSRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIITAVEKLGKKHEEHIAAYGEGNERRLTGSHETASISQFSYGVANRGASIRIGRDTYREKKGYFEDRRPASNMDPYVVTKMICKTTILD 463
            QVGPCVGI +GD+LWVSRYLLQRVCE FGVIVSLDPKPIPGDWNGAGCHTNYS++ MR  GGY  II A+EKLGKKHE+HI AYGEGNERRLTG HETASISQFSYGVANRGASIRIGR    E  GYFEDRRPASNMDPYVVT MI +TT+LD
Sbjct:  211 QVGPCVGITAGDDLWVSRYLLQRVCELFGVIVSLDPKPIPGDWNGAGCHTNYSTEPMRNPGGYAKIIEAIEKLGKKHEQHIKAYGEGNERRLTGRHETASISQFSYGVANRGASIRIGRQVEEEGCGYFEDRRPASNMDPYVVTGMIIQTTLLD 364
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BLAST of mRNA_H-elongata_contig51906.12472.1 vs. uniprot
Match: A0A2R6VXE6_MARPO (Glutamine synthetase n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6VXE6_MARPO)

HSP 1 Score: 246 bits (628), Expect = 1.110e-74
Identity = 113/153 (73.86%), Postives = 134/153 (87.58%), Query Frame = 2 
Query:    2 QVGPCVGIKSGDELWVSRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIITAVEKLGKKHEEHIAAYGEGNERRLTGSHETASISQFSYGVANRGASIRIGRDTYREKKGYFEDRRPASNMDPYVVTKMICKTTIL 460
            QVGP VGI +GD+LW +RY+L+R+ E  GV++SLDPKPI GDWNGAGCHTNYS+K MREEGGY  I  A+EKLG +H+EHIAAYGEGNERRLTG HETASI+ FS+GVANRGAS+R+GRDT ++ KGYFEDRRPASNMDPY+VT MI +TT+L
Sbjct:    8 QVGPSVGIAAGDQLWAARYILERITEIAGVVLSLDPKPIEGDWNGAGCHTNYSTKTMREEGGYAEIKKAIEKLGLRHKEHIAAYGEGNERRLTGKHETASINNFSWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYIVTSMIAQTTLL 160
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BLAST of mRNA_H-elongata_contig51906.12472.1 vs. uniprot
Match: A0A0P6IKA6_9CRUS (Glutamine synthetase 2 cytoplasmic n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P6IKA6_9CRUS)

HSP 1 Score: 249 bits (637), Expect = 1.190e-74
Identity = 119/154 (77.27%), Postives = 130/154 (84.42%), Query Frame = 2 
Query:    2 QVGPCVGIKSGDELWVSRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIITAVEKLGKKHEEHIAAYGEGNERRLTGSHETASISQFSYGVANRGASIRIGRDTYREKKGYFEDRRPASNMDPYVVTKMICKTTILD 463
            QVGPC GI+SGD +W+SRY+L RVCE FGVIVS DPKPIPGDWNGAGCHTNYS++ MRE+GG   II A+EK+  KH+ HIAAYG+GNERRLTG HETASI QFSYGVANRGASIRI R    E KGYFEDRRPASNMDPYVVT  I KTTILD
Sbjct:  101 QVGPCTGIESGDHMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNYSTQAMREDGGMAVIIEAIEKMKLKHKVHIAAYGKGNERRLTGRHETASIEQFSYGVANRGASIRIPRQAEAEGKGYFEDRRPASNMDPYVVTGRIVKTTILD 254
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BLAST of mRNA_H-elongata_contig51906.12472.1 vs. uniprot
Match: Q42874_SOLLC (Glutamine synthetase (Fragment) n=2 Tax=cellular organisms TaxID=131567 RepID=Q42874_SOLLC)

HSP 1 Score: 246 bits (628), Expect = 1.600e-74
Identity = 112/153 (73.20%), Postives = 134/153 (87.58%), Query Frame = 2 
Query:    2 QVGPCVGIKSGDELWVSRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIITAVEKLGKKHEEHIAAYGEGNERRLTGSHETASISQFSYGVANRGASIRIGRDTYREKKGYFEDRRPASNMDPYVVTKMICKTTIL 460
            QVGP VGI +GDE+WV+RY+L+R+ E  GV+VS DPKPIPGDWNGAG HTNYS+K MRE+GGY+ I+ A+EKLG KH+EHIAAYGEGNERRL+G HETA+I+ F +GVANRGAS+R+GRDT +  KGYFEDRRPASNMDPYVVT MI +TTI+
Sbjct:   20 QVGPSVGISAGDEVWVARYILERIAEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMREDGGYEIILKAIEKLGLKHKEHIAAYGEGNERRLSGKHETANINTFKWGVANRGASVRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIAETTII 172
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BLAST of mRNA_H-elongata_contig51906.12472.1 vs. uniprot
Match: O04957_HELAN (Glutamine synthetase (Fragment) n=3 Tax=Helianthus annuus TaxID=4232 RepID=O04957_HELAN)

HSP 1 Score: 243 bits (621), Expect = 1.410e-73
Identity = 114/152 (75.00%), Postives = 131/152 (86.18%), Query Frame = 2 
Query:    2 QVGPCVGIKSGDELWVSRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIITAVEKLGKKHEEHIAAYGEGNERRLTGSHETASISQFSYGVANRGASIRIGRDTYREKKGYFEDRRPASNMDPYVVTKMICKTTI 457
            QVGP VGI +GDELWV+RY+L+R+ E  GV+VS DPKPIPGDWNGAG HTNYS+K MR+EGGY+ I  A+EK+G KH+EHIAAYGEGNERRLTG HETA I+   +GVANRGASIR+GRDT +E KGYFEDRRPASNMDPYVVT MI +TTI
Sbjct:    3 QVGPSVGISAGDELWVARYILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMRDEGGYEVIKKAIEKMGLKHKEHIAAYGEGNERRLTGRHETADINTSLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTI 154
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BLAST of mRNA_H-elongata_contig51906.12472.1 vs. uniprot
Match: D0NNT6_PHYIT (Glutamine synthetase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NNT6_PHYIT)

HSP 1 Score: 246 bits (627), Expect = 1.410e-73
Identity = 120/154 (77.92%), Postives = 128/154 (83.12%), Query Frame = 2 
Query:    2 QVGPCVGIKSGDELWVSRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIITAVEKLGKKHEEHIAAYGEGNERRLTGSHETASISQFSYGVANRGASIRIGRDTYREKKGYFEDRRPASNMDPYVVTKMICKTTILD 463
            QVGPC GI+SGD LW+SRY+L RVCE FGV VS DPKPIPGDWNGAGCHTNYS+K MREEGG   II A+EK+  KH+EHIAAYG GNERRLTG HETAS+  FSYGVANRGASIRI R    E KGYFEDRRPASNMDPYVVT  I KTTILD
Sbjct:   73 QVGPCTGIESGDHLWMSRYILLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTKAMREEGGMAKIIEAIEKMKLKHKEHIAAYGTGNERRLTGRHETASMDTFSYGVANRGASIRIPRVAEAEGKGYFEDRRPASNMDPYVVTGRIIKTTILD 226
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BLAST of mRNA_H-elongata_contig51906.12472.1 vs. uniprot
Match: GLNA_NICPL (Glutamine synthetase n=27 Tax=Pentapetalae TaxID=1437201 RepID=GLNA_NICPL)

HSP 1 Score: 248 bits (633), Expect = 1.050e-72
Identity = 114/153 (74.51%), Postives = 133/153 (86.93%), Query Frame = 2 
Query:    2 QVGPCVGIKSGDELWVSRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIITAVEKLGKKHEEHIAAYGEGNERRLTGSHETASISQFSYGVANRGASIRIGRDTYREKKGYFEDRRPASNMDPYVVTKMICKTTIL 460
            QVGP VGI +GDE+WV+RY+L+R+ E  GV+VS DPKPIPGDWNGAG HTNYS+K MRE+GGY+ I+ A+EKLG KH+EHIAAYGEGNERRLTG HETA+IS F +GVANRGAS+R+GRDT +  KGYFEDRRPASNMDPYVVT MI  TTI+
Sbjct:  201 QVGPSVGISAGDEVWVARYILERIAEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMREDGGYEVILKAIEKLGLKHKEHIAAYGEGNERRLTGKHETANISTFKWGVANRGASVRVGRDTEKAGKGYFEDRRPASNMDPYVVTAMIADTTII 353
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BLAST of mRNA_H-elongata_contig51906.12472.1 vs. uniprot
Match: A0A4D6LUN5_VIGUN (Glutamine synthetase n=1 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6LUN5_VIGUN)

HSP 1 Score: 244 bits (622), Expect = 1.380e-72
Identity = 112/153 (73.20%), Postives = 132/153 (86.27%), Query Frame = 2 
Query:    2 QVGPCVGIKSGDELWVSRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIITAVEKLGKKHEEHIAAYGEGNERRLTGSHETASISQFSYGVANRGASIRIGRDTYREKKGYFEDRRPASNMDPYVVTKMICKTTIL 460
            QVGP VGI +GDE+W +RY+L+R+ E  G IVS DPKPIPGDWNGAG HTNYS+K MREEGGY+ I  A+EKLG +H+EHIAAYG+GNERRLTG HETA I+ FS+GVANRG+S+R+GRDT ++ KGYFEDRRPASNMDPYVVT MI +TTIL
Sbjct:   91 QVGPSVGISAGDEVWAARYILERITELAGAIVSFDPKPIPGDWNGAGAHTNYSTKSMREEGGYEVIKKAIEKLGLRHKEHIAAYGKGNERRLTGKHETADINTFSWGVANRGSSVRVGRDTEKQGKGYFEDRRPASNMDPYVVTSMIAETTIL 243
[Close]
BLAST of mRNA_H-elongata_contig51906.12472.1 vs. uniprot
Match: A0A2R6XRC7_MARPO (Glutamine synthetase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XRC7_MARPO)

HSP 1 Score: 248 bits (632), Expect = 1.860e-72
Identity = 113/153 (73.86%), Postives = 136/153 (88.89%), Query Frame = 2 
Query:    2 QVGPCVGIKSGDELWVSRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIITAVEKLGKKHEEHIAAYGEGNERRLTGSHETASISQFSYGVANRGASIRIGRDTYREKKGYFEDRRPASNMDPYVVTKMICKTTIL 460
            QVGP VGI +GD+LW SRY+L+R+ E  GV+++LDPKPI GDWNGAGCHTNYS+K MRE+GG++ I  A+EKLG +H+EHIAAYGEGNERRLTG HETASI+QFS+GVANRGAS+R+GRDT +E KGYFEDRRPASNMDPYVVT +I +TT+L
Sbjct:  202 QVGPAVGISAGDQLWASRYILERITEIAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEIIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETASINQFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTALIAQTTLL 354
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51906.12472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPA6_ECTSI3.920e-8185.23Glutamine synthetase n=3 Tax=Ectocarpus TaxID=2879... [more]
A0A835YJ88_9STRA1.680e-7983.12Glutamine synthetase n=3 Tax=Tribonema minus TaxID... [more]
A0A2R6VXE6_MARPO1.110e-7473.86Glutamine synthetase n=1 Tax=Marchantia polymorpha... [more]
A0A0P6IKA6_9CRUS1.190e-7477.27Glutamine synthetase 2 cytoplasmic n=1 Tax=Daphnia... [more]
Q42874_SOLLC1.600e-7473.20Glutamine synthetase (Fragment) n=2 Tax=cellular o... [more]
O04957_HELAN1.410e-7375.00Glutamine synthetase (Fragment) n=3 Tax=Helianthus... [more]
D0NNT6_PHYIT1.410e-7377.92Glutamine synthetase n=1 Tax=Phytophthora infestan... [more]
GLNA_NICPL1.050e-7274.51Glutamine synthetase n=27 Tax=Pentapetalae TaxID=1... [more]
A0A4D6LUN5_VIGUN1.380e-7273.20Glutamine synthetase n=1 Tax=Vigna unguiculata Tax... [more]
A0A2R6XRC7_MARPO1.860e-7273.86Glutamine synthetase n=2 Tax=Marchantia polymorpha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51906contigH-elongata_contig51906:329..4033 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score164.5
Seed ortholog evalue2.6e-38
Seed eggNOG ortholog2880.D7FPA7
KEGG rclassRC00010,RC02798
KEGG koko:K01915
KEGG ReactionR00253
KEGG Pathwayko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727
EggNOG free text desc.glutamine biosynthetic process
EggNOG OGsCOG0174@1,KOG0683@2759
EC6.3.1.2
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Exons3
Model size2009
Cds size297
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51906.12472.1prot_H-elongata_contig51906.12472.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig51906 498..2490 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930848.7140672-UTR-H-elongata_contig51906:328..4971622930848.7140672-UTR-H-elongata_contig51906:328..497Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51906 329..497 +
1691679596.435315-UTR-H-elongata_contig51906:328..4971691679596.435315-UTR-H-elongata_contig51906:328..497Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51906 329..497 +
1622930848.7951133-UTR-H-elongata_contig51906:2490..40331622930848.7951133-UTR-H-elongata_contig51906:2490..4033Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51906 2491..4033 +
1691679596.4695523-UTR-H-elongata_contig51906:2490..40331691679596.4695523-UTR-H-elongata_contig51906:2490..4033Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51906 2491..4033 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930848.7362266-CDS-H-elongata_contig51906:497..5871622930848.7362266-CDS-H-elongata_contig51906:497..587Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51906 498..587 +
1691679596.4451187-CDS-H-elongata_contig51906:497..5871691679596.4451187-CDS-H-elongata_contig51906:497..587Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51906 498..587 +
1622930848.7574346-CDS-H-elongata_contig51906:1709..18981622930848.7574346-CDS-H-elongata_contig51906:1709..1898Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51906 1710..1898 +
1691679596.453135-CDS-H-elongata_contig51906:1709..18981691679596.453135-CDS-H-elongata_contig51906:1709..1898Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51906 1710..1898 +
1622930848.7787435-CDS-H-elongata_contig51906:2472..24901622930848.7787435-CDS-H-elongata_contig51906:2472..2490Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51906 2473..2490 +
1691679596.4611182-CDS-H-elongata_contig51906:2472..24901691679596.4611182-CDS-H-elongata_contig51906:2472..2490Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51906 2473..2490 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig51906.12472.1

>prot_H-elongata_contig51906.12472.1 ID=prot_H-elongata_contig51906.12472.1|Name=mRNA_H-elongata_contig51906.12472.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
MREEGGYDAIITAVEKLGKKHEEHIAAYGEGNERRLTGSHETASISQFSY
GVANRGASIRIGRDTYREKKGYFEDRRPASNMDPYVVTKMICKTTILD*
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mRNA from alignment at H-elongata_contig51906:329..4033+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig51906.12472.1 ID=mRNA_H-elongata_contig51906.12472.1|Name=mRNA_H-elongata_contig51906.12472.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3705bp|location=Sequence derived from alignment at H-elongata_contig51906:329..4033+ (Himanthalia elongata Himel1 dioecious)
TCAGGTGGGTCCCTGCGTGGGAATCAAGTCTGGCGATGAGCTCTGGGTGT
CTCGCTACTTGCTCCAGCGCGTATGCGAGCAGTTCGGGGTGATCGTGTCC
CTCGACCCCAAGCCCATCCCCGGTGACTGGAACGGCGCCGGTTGTCACAC
GAACTACTCGAGCAAGGAGATGCGCGAGGAGGGCGGCTACGACGCCATCA
TTACTGCCGTCGAGAAGCTCGGCAAAAAGCACGAGGAGCACATCGCTGCG
TACGGAGAGGTACGCCCGCGTGTCTCTTCTTCCCTCCCCGTCACTCAGAC
CGATCCGCATCATCCGATGTGACCCACACAGACGTTTACCCACTGATCAG
CGTTCAAATTGGGATGGTAACGCTTCCCGTCTCCATTCAAGAAAGACAGA
ACCGGCGGCCTCTCCTACTAAATAAGTCCATTGTTGTTTTTGTGGATGTT
TTTTTTTTCAACAACTTTCATCATCTATCTACTGATCAACAATAATATCA
TGTTATATTTTGCCGAAAGTCTGATAATAAACTTGAAACCCCTTCTAGTA
AAATACTTAGTATGTAGTACATATTAATAGCACACATTACTATCTAGTAA
ATTTCTTCTTATCCTAGTCCATGATATCACACATTTCATAGTGTCACTTA
TTCCTATTCTCTCTCTCTCTCTCTCTCTCGCATCCTCTCTTCTTCCTTTA
ACCATAATAATTTGATATATAGAACTATATCTACCGCGCCTCATCCATAT
ATATATATATATATATATATATATAATTTACCTACTATGCCTAACAAGTC
TTCCTAACTAGAGTTTTTTCTCTAGACTCTGGTTTGATCATAGTCCCCAC
ATGATAAACAATAGTGCAAGTTTTCCTGGATAATGATGGGACCCCGACGT
TGTACCGTCGACCTGATGAATTTATTATTAGGAACACGATTTATCACATG
TGACGATTTTGTGCTCGAAGGTAGTAATGTACACATTCGAACCTGACGAT
AGTTGGTCCCTTGGACTGTACCTCTCACGGTGAGGGCGTGGATCTTCGGG
TGGTTGTAATCGGGGTTTATATGTTGTTTAGGAAAAATGTGTCGCGCCAC
GGTCATTTGGCTAAAGTTTCGCGGAGATGGATGAAGGGGTTAAAATAGGG
AGTGGTTTTCCCCACGTGGACTCGGTTTGCCAACAACGTCCGGCGTGTCG
TCGCTGTTTTATTTGATCAGCCCCTCCCCCCGGCCGTACCCCTTACTCCC
CCCTCTCACCCCCCCCCCCCCCCCCCCNNNNNNNNNNGCTCTGGCTTCCC
AAACACCCCCCGCGGTGGCTCGCTGTTTTTTTTCCCCCCCCCCCCCCCCC
CCACCCTCCTTCTCAACCGTCGTCCACCCAGGGTAACGAGAGGCGCCTTA
CGGGAAGCCACGAAACCGCGTCTATCTCACAGTTCTCTTACGGCGTGGCC
AACCGCGGCGCTTCCATCCGCATCGGCCGCGATACGTATAGGGAGAAGAA
GGGATACTTCGAGGACCGCAGGCCCGCCTCTAACATGGACCCCTACGTGG
TGACTAAGATGATTTGCAAGGTAAAAACAGGAGATGAGATGGAAAACGCC
TGTTCACAAAATATTCGGCGAGGTTGGAGGCGCCAGAGGGGTAATGGGTG
GAATCGTAATAGTAAAGGGGGTTCCATATCGGAGGCGTTCGTGTGTTGAT
TACGCTGTTTTTGTCCAGGTGGAAAGTCTGTCGTTACACGACCGCCACGT
ATAGGATGGGGTTAGTACCCCAACAATATATTGATCTTGGTAAAATATTG
TTGCCGGTCGCTCTCGATATCGGCACGGTGCAACATCTTAGCTAAGCCAC
TTTTACCAGGGCCGGGGTTGCTGGAGACGTTTAATCTTAAATTTGCGACG
TGTTGTGCGTTTGCACACACGCACGCGCAATGACTGTGATGCTGGCCGTT
GATGTGGCCTGGGTCACAGTTGACGGTTCGATTTTTCTCTATCTATCTCG
ATTAGCGATACCATTGAAGCCTCTTCCGCTGATCCCCGATCTCAATAGCC
CTTGCTGAACACTGTTGTCAATGAATAACCCTCTCTCACCCTCTCCCCCT
CTCCCCCTCTCCCCTGTTCCTGTGCTCTCGATTGATGAAACCAGACCACG
ATCCTCGACTAGATCCATCTCTCAGCACAAGAACTACACAAGGCGGAGGT
ATTCCGGCACTAGGCGGTAATAACTACAACTTACGACGACGCTTTATCTC
ACCCGCCCGCCCCCCCTCCTCGGCCATAACCGCCATCGATGACTTCCGGG
AGTCAAGGTCTTCCGAGCGCGTAGGCATTGGGACGTGTGTGATGGGGATA
ATTTCATGTTTGACAAGGAGGTAGTTTTGAAAGGACGCTAGCGCAGTCCA
TGTTGTGACATCTCACTGCATATAATGGATGGATTGGCGGTGCGTAGGGC
GCCCGGTGAACGACCCCTGCGTTTGACGTGCGATGGGGGGAGTTCGTTTT
TGACGATGACCCTTCGATAATTATTTGTGTTCCATGAAATAGGGCACGAG
ATAGTGTGCGTGTGCGCAGGAAGCGCAATACAGATCGGTTACCAAGAAAA
ATACATATTAAAAAAAGTTGGAGGGAAGAGAGGGAGGGATGAGAGGGACG
AGCAAGACGACGCAGGCGGAAGGATCGATTCAACGGACACGACCTTTCAT
TCGGGGATTGACGCACTTCATTGGAAGGCGGAAATAATGTGGTAGGCAGT
CCTGGCTTCTCTCATTTCAATTGTCGCTGCCCACACAGCATGTAATCTGG
TCGAGAGAGTGACTATGACAGAAAAAGAGAGAGAGAGAGAGAGAGAAAAA
GTAAGAAGCTGAAGGGTTATTGAAAAGCTTCCGAGGCGTGCTGCGACAAC
CACTGCGAATATTATTTCGTGTGTCGTGCCAGCGATGTTCCTTGGGGTTT
CAACTCCCTGGCGGGCGGGTTCACTGCCGACCAGGCGCTTCCTTGTTTGA
TTAACTCATGGGATAGGATACGAATGGGCGGGATACTCTAGCGTCTATTT
TCTCCGATATACAGGTTGCTATGCACCTGGTACTCGTTTATTTTCTCCCG
ACGTGTGCAGCCTTCATGTACGCGGTAGGACTAATTTGTTTCCCCCGGGT
AGGTTGTTTGTTGTAGTCAGAGCGCCGTAGAAAACAGGAGAAACTCCGTA
CCGTACTCTAGCCGTCGCATTGCCAAGTGTCTTAATTCTTTTTGTTTTCG
GGTGTTGGAGGAAGCGGTAGAGACACGCCTCCCGTCTCTTGTCTTAGAGA
GTTCTCTGGGAAAGGAAAGAGAGGAGCAAGTACTGCGAGGTTGGTTGCGC
GCGCCAGCTCGGTGTTCCGCTGTAAATACGAGATGATGCTTTTAGGCGAC
TCAAAGCATGCTTTCTTCGTGGAAATGTTTTCATTCTTCCGGGGCGGGCT
TTTTCGGAAATGAAACACTGCCGCTGACGTCATGATGAAAAATACACCAC
CCCTGTTCGGTTTCATTTCCGAAACAACTCCCCCCCCCCCCCCAACTATT
TTATTTTTTACTAAATAACAATTAGCTCTCCCATGCCTGAGTTATCATGT
AAAAATAACCGACTTCTTGAGTCCCCTACCTTTGGTTATTTTTGTACAGC
GTCATTTTGGGTGCGAAATTTGACACGCTTTTTATTTATTGCACCTTTCC
TATGT
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Coding sequence (CDS) from alignment at H-elongata_contig51906:329..4033+

>mRNA_H-elongata_contig51906.12472.1 ID=mRNA_H-elongata_contig51906.12472.1|Name=mRNA_H-elongata_contig51906.12472.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=594bp|location=Sequence derived from alignment at H-elongata_contig51906:329..4033+ (Himanthalia elongata Himel1 dioecious)
ATGCGCGAGGAGGGCGGCTACGACGCCATCATTACTGCCGTCGAGAAGCT
CGGCAAAAAGCACGAGGAGCACATCGCTGCGTACGGAGAGATGCGCGAGG
AGGGCGGCTACGACGCCATCATTACTGCCGTCGAGAAGCTCGGCAAAAAG
CACGAGGAGCACATCGCTGCGTACGGAGAGGGTAACGAGAGGCGCCTTAC
GGGAAGCCACGAAACCGCGTCTATCTCACAGTTCTCTTACGGCGTGGCCA
ACCGCGGCGCTTCCATCCGCATCGGCCGCGATACGTATAGGGAGAAGAAG
GGATACTTCGAGGACCGCAGGCCCGCCTCTAACATGGACCCCTACGTGGT
GACTAAGATGATTTGCAAGGGTAACGAGAGGCGCCTTACGGGAAGCCACG
AAACCGCGTCTATCTCACAGTTCTCTTACGGCGTGGCCAACCGCGGCGCT
TCCATCCGCATCGGCCGCGATACGTATAGGGAGAAGAAGGGATACTTCGA
GGACCGCAGGCCCGCCTCTAACATGGACCCCTACGTGGTGACTAAGATGA
TTTGCAAGACCACGATCCTCGACTAGACCACGATCCTCGACTAG
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