mRNA_H-elongata_contig51845.12464.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig51845.12464.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE) HSP 1 Score: 168 bits (426), Expect = 5.760e-47 Identity = 92/172 (53.49%), Postives = 114/172 (66.28%), Query Frame = 1
Query: 1 MKFGKFKMDVLDMRKELKVYGIPALGDNDLPDPGAAKGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYRRVWDSSPPDPSFFRDASILLTPPFNGGHYLTAFRLTEKDADSLPLSSLVTAPTTDDTVKEKLQGAWDGIKKRAVDAQREKQTRAASVDPQGP---FKRQRT 507
MKFG+ KM+VLD K LKV+ IP LG + LPD K LP KMV+P DLHPVA + R++L +A VSRLY RVWD + DPSFF DAS LLTPPF+ GH+L+A +LT ++ LP S+V APT+ + VKEKL G W IK+ AV A + Q+ A G FKR RT
Sbjct: 219 MKFGELKMEVLDPSKPLKVFDIPPLGQDGLPDREEQKKALPHKMVEPDDLHPVAKKARSKLGRALVSRLYGRVWDHNTLDPSFFCDASCLLTPPFSEGHHLSAMKLTAEEHAYLPAGSVVVAPTSYEEVKEKLDGVWTKIKQGAVKAVKTAQSEAEGSGGDGSGGLFKRART 390
BLAST of mRNA_H-elongata_contig51845.12464.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE) HSP 1 Score: 162 bits (410), Expect = 1.030e-44 Identity = 92/174 (52.87%), Postives = 113/174 (64.94%), Query Frame = 1
Query: 1 MKFGKFKMDVLDMRKELKVYGIPALGDNDLPDPGAAKGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYRRVWDSSPPDPSFFRDASILLTPPFNGGHYLTAFRLTEKDADSLPLSSLVTAPTTDDTVKEKLQGAWDGIKKRAVDAQREKQTRAASVDP-QG--PFKRQRTSG 513
MKFG KM VL+ +LKV+ IP LG++ LPD K LP KMV +LHPVA + R EL +A VSR Y RVWD S DPS F DA+ LLTPPF+ G+YL+A +LT ++ + L S V APT+D+ V+EKL+G W I KRAV A + RAA QG PFKR RTSG
Sbjct: 250 MKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKLTAEEDEYLAAGSTVVAPTSDEDVREKLEGIWVEINKRAVTAVKTAHNRAAGEGGGQGLDPFKRARTSG 423
BLAST of mRNA_H-elongata_contig51845.12464.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 161 bits (408), Expect = 3.880e-44 Identity = 88/174 (50.57%), Postives = 112/174 (64.37%), Query Frame = 1
Query: 1 MKFGKFKMDVLDMRKELKVYGIPALGDNDLPDPGAAKGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYRRVWDSSPPDPSFFRDASILLTPPFNGGHYLTAFRLTEKDADSLPLSSLVTAPTTDDTVKEKLQGAWDGIKKRAVDAQREKQTRAASVDPQG---PFKRQRTSG 513
MKF K +VLDM + L+V+ IPALG++ LP+ G K LP KMV LHP + R EL +A +SRLY RVW+ P+PSFF DA+ LLTPPF+ G +++A RLT +DA LP SS + APT D V KL AW I+KRAV++ + +Q RA D G PFKR TSG
Sbjct: 181 MKFATLKTNVLDMSEPLRVFDIPALGEDGLPNRGEQKKALPSKMVSADQLHPTTTLAREELCRALMSRLYERVWNEQSPNPSFFCDAACLLTPPFSEGRHVSAMRLTAEDAMYLPNSSNIIAPTADFEVTAKLDWAWTEIRKRAVESVKTEQDRAGGSDAGGGGGPFKRAHTSG 354
BLAST of mRNA_H-elongata_contig51845.12464.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE) HSP 1 Score: 163 bits (413), Expect = 4.520e-44 Identity = 92/174 (52.87%), Postives = 114/174 (65.52%), Query Frame = 1
Query: 1 MKFGKFKMDVLDMRKELKVYGIPALGDNDLPDPGAAKGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYRRVWDSSPPDPSFFRDASILLTPPFNGGHYLTAFRLTEKDADSLPLSSLVTAPTTDDTVKEKLQGAWDGIKKRAVDAQREKQTRAASVDP-QG--PFKRQRTSG 513
MKFG KM VL+ +LKV+ IP LG++ LPD K LP KMV +LHPVA + R EL +A VSR Y RVWD S DPS F DA+ LLTPPF+ G+Y +A +LT ++ + L S V APT+D+ V+EKL+G W IKKRA+ A + Q RAA QG PFKR RTSG
Sbjct: 379 MKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPPFSEGNYPSAMKLTAEEDEYLAAGSTVVAPTSDEDVREKLEGIWAEIKKRAITAVKTAQNRAAGEGGGQGSDPFKRARTSG 552
BLAST of mRNA_H-elongata_contig51845.12464.1 vs. uniprot
Match: A0A6H5JGB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGB7_9PHAE) HSP 1 Score: 157 bits (396), Expect = 2.310e-43 Identity = 89/173 (51.45%), Postives = 113/173 (65.32%), Query Frame = 1
Query: 1 MKFGKFKMDVLDMRKELKVYGIPALGDNDLPDPGAAKGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYRRVWDSSPPDPSFFRDASILLTPPFNGGHYLTAFRLTEKDADSLPLSSLVTAPTTDDTVKEKLQGAWDGIKKRAVDAQREKQTRAASVDP---QGPFKRQRTS 510
MKFG KM VL +ELKV+ +P LG++ LP+ K LP KMV DLHPVA + R +L +A V+R Y RVWD+S DPS DA+ LLTPPF+ G+YL+A +LT + + LP S VTAPT D+ V++KL GAW IKKRAV A + Q+RAA + P KR RTS
Sbjct: 166 MKFGMLKMRVLHPSEELKVFDVPPLGEDGLPE--EQKKALPQKMVAHDDLHPVAQKARNKLCRALVTRFYGRVWDTSTLDPSVLCDAACLLTPPFSEGNYLSAMKLTAEGCEYLPTGSCVTAPTPDEEVQKKLDGAWAEIKKRAVAAVKTAQSRAAGXXXXXXKRPLKRARTS 336
BLAST of mRNA_H-elongata_contig51845.12464.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 159 bits (402), Expect = 1.090e-42 Identity = 90/174 (51.72%), Postives = 114/174 (65.52%), Query Frame = 1
Query: 1 MKFGKFKMDVLDMRKELKVYGIPALGDNDLPDPGAAKGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYRRVWDSSPPDPSFFRDASILLTPPFNGGHYLTAFRLTEKDADSLPLSSLVTAPTTDDTVKEKLQGAWDGIKKRAVDAQREKQTRAASVDP-QG--PFKRQRTSG 513
+KFG KM VL+ +LKV+ IP LG++ LPD K L KMV +LHPVA + R +L +A VSR Y VWD S DPS F DA+ LLTPPF+ G+YL+A +LT ++ D+L S V APT+D+ V+EKL+G W IKKRAV A + +Q R A QG PFKR RTSG
Sbjct: 259 IKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDRKEQKKPLRHKMVAHDELHPVAQKARDKLCRALVSRFYGHVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKLTAEEDDNLAAVSTVVAPTSDEDVREKLEGIWAEIKKRAVTAVKTEQNRVAGEGGGQGSDPFKRARTSG 432
BLAST of mRNA_H-elongata_contig51845.12464.1 vs. uniprot
Match: A0A6H5JWE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWE7_9PHAE) HSP 1 Score: 150 bits (379), Expect = 5.100e-41 Identity = 85/172 (49.42%), Postives = 110/172 (63.95%), Query Frame = 1
Query: 10 GKFKMDVLDMRKEL--KVYGIPALGDNDLPDPGAAKGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYRRVWDSSPPDPSFFRDASILLTPPFNGGHYLTAFRLTEKDADSLPLSSLVTAPTTDDTVKEKLQGAWDGIKKRAVDAQREKQTRAASVDPQG---PFKRQRTS 510
FK+ + D++ ++ +V+ IP LG++ LPD K LP KMV DLHPVA + R EL +A V+R Y RVWD+S DPS DA LLTPPF+ G+Y++A +LT ++ + LP S VTAPT D+ VKEKL GAW IKKRAV A + Q+RAA P KR RTS
Sbjct: 130 ANFKVKIDDLQVDVLGEVFDIPPLGEDGLPDRKDQKKALPHKMVAHDDLHPVAHKARNELCRALVTRFYGRVWDTSTLDPSVLCDAPCLLTPPFSEGNYVSAMKLTAEECEYLPAGSCVTAPTLDEEVKEKLDGAWTEIKKRAVAAVKTAQSRAAXXXXXXXXXPLKRARTS 301
BLAST of mRNA_H-elongata_contig51845.12464.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 155 bits (393), Expect = 7.480e-41 Identity = 85/173 (49.13%), Postives = 109/173 (63.01%), Query Frame = 1
Query: 1 MKFGKFKMDVLDMRKELKVYGIPALGDNDLPDPGAAKGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYRRVWDSSPPDPSFFRDASILLTPPFNGGHYLTAFRLTEKDADSLPLSSLVTAPTTDDTVKEKLQGAWDGIKKRAVDAQREKQTRAASVDP--QGPFKRQRTSG 513
MKFG DVLD K+LKV+ +P +G++ LPD G K LPFKMV P LH +TR E+ +A VSR Y RVWD + DP FF A+ LLTPPF+ G ++ A +L D + LP +S TAPT D+ V KL W IK+RAV+A +++Q AAS P G FKR RT+G
Sbjct: 503 MKFGMLNTDVLDPSKDLKVFQVPPIGEDGLPDRGQQKKPLPFKMVPPEQLHAAVEKTRVEMRRALVSRFYGRVWDENTLDPPFFCHAACLLTPPFSEGLHVAAMKLAAGDDEYLPSTSTATAPTMDEEVTAKLDETWKEIKERAVEAVKKEQA-AASSGPGAAGVFKRARTAG 674
BLAST of mRNA_H-elongata_contig51845.12464.1 vs. uniprot
Match: A0A6H5KBZ2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ2_9PHAE) HSP 1 Score: 131 bits (329), Expect = 2.190e-35 Identity = 70/131 (53.44%), Postives = 88/131 (67.18%), Query Frame = 1
Query: 130 MVKPGDLHPVASRTRAELSKAFVSRLYRRVWDSSPPDPSFFRDASILLTPPFNGGHYLTAFRLTEKDADSLPLSSLVTAPTTDDTVKEKLQGAWDGIKKRAVDAQREKQTRAASVDP---QGPFKRQRTSG 513
MV DLHPVA + R EL +A V+R Y RVWD S DPS F D + LLTPPF+ G+YL+A +LT ++ D LP S V APT+D+ V+EKL GAW I+KRAV A ++ Q +AA GPFKR RT+G
Sbjct: 1 MVAHDDLHPVAQKARQELCRALVTRFYGRVWDESTLDPSIFADVACLLTPPFSEGNYLSAMKLTVEEGDYLPAGSSVIAPTSDEDVREKLDGAWAEIQKRAVTAVKKAQRQAAGDSDGGGAGPFKRARTNG 131
BLAST of mRNA_H-elongata_contig51845.12464.1 vs. uniprot
Match: A0A6H5JTT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT2_9PHAE) HSP 1 Score: 132 bits (332), Expect = 3.920e-34 Identity = 69/131 (52.67%), Postives = 87/131 (66.41%), Query Frame = 1
Query: 19 KMDVLDMRKELKVYGIPALGDNDLPDPGAAKGDLPFKMVKPGDLHPVASRTRAELSKAFVSRLYRRVWDSSPPDPSFFRDASILLTPPFNGGHYLTAFRLTEKDADSLPLSSLVTAPTTDDTVKEKLQGAW 411
KM VLD +ELKV+ IP LG++ LPD K LP MV L PVA + R EL +A +R Y RVWD+S DPS DA+ LLTPPF+ G+YL+A +LT ++ + LP S VTAPT D+ V+EKL GAW
Sbjct: 221 KMRVLDPSEELKVFDIPPLGEDGLPDRKEQKKALPHHMVAHDYLDPVAQKERNELCRALGTRFYGRVWDTSTLDPSVLCDAACLLTPPFSEGNYLSAMKLTAEEGEYLPAGSCVTAPTLDEEVQEKLDGAW 351 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51845.12464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig51845.12464.1 >prot_H-elongata_contig51845.12464.1 ID=prot_H-elongata_contig51845.12464.1|Name=mRNA_H-elongata_contig51845.12464.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=171bp MKFGKFKMDVLDMRKELKVYGIPALGDNDLPDPGAAKGDLPFKMVKPGDLback to top mRNA from alignment at H-elongata_contig51845:2223..2735+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig51845.12464.1 ID=mRNA_H-elongata_contig51845.12464.1|Name=mRNA_H-elongata_contig51845.12464.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=513bp|location=Sequence derived from alignment at H-elongata_contig51845:2223..2735+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig51845:2223..2735+ >mRNA_H-elongata_contig51845.12464.1 ID=mRNA_H-elongata_contig51845.12464.1|Name=mRNA_H-elongata_contig51845.12464.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1026bp|location=Sequence derived from alignment at H-elongata_contig51845:2223..2735+ (Himanthalia elongata Himel1 dioecious)back to top |