mRNA_H-elongata_contig51791.12455.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig51791.12455.1
Unique NamemRNA_H-elongata_contig51791.12455.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig51791.12455.1 vs. uniprot
Match: D7FHL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL5_ECTSI)

HSP 1 Score: 384 bits (987), Expect = 1.520e-125
Identity = 213/330 (64.55%), Postives = 236/330 (71.52%), Query Frame = 1
Query:    4 QVLSGIRTVASLSSEDIELERYAGHLDGAYNAGVKEGMFKGIGNGALFVSFYFSYALAFWFGTKQVADGNDDRTGGDVLSSIFAVLMGSMMFGQTAPGIAALGTARGAAVEVFETLERVPPIDSSSVEGVKPEKVEGNVQFDSIGFSYVRKKRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMINTIQGKGSVMNVMNAKAYLLFFFISLQTPSPARPLDVVYSSMSLDVPVGKTLALVGPSGGGKSTATKLLLRFYDPTSGCVKLDGVDIRSLNLAWYRKQIGFVGQEPVLFAGTIALNIANGKEGANEDEIIAAAKAANAHQFIK 993
            +VLSGIRTVASL+SE+IEL+RY  HLDGAY+AGVKEGM KG+GNG LF SFY SYALAFWFGTKQVADG D R+GGDVL++IFAVLMGSMMFGQTAPGIAALG ARGAAVEVFE L+RVPPIDSSS +G+KP  VEG V FDS+GFSY                                                                     PARP DVVY S+SL+V VGKTLALVGPSGGGKST TKLLLRFYDPTSG V LDG DI+SLN+AWYR++IG+VGQEPVLFAGTIALNIANGK G+ +DEII AAKAANAH+FIK
Sbjct:  234 EVLSGIRTVASLNSEEIELKRYGKHLDGAYHAGVKEGMAKGLGNGMLFTSFYMSYALAFWFGTKQVADG-DGRSGGDVLAAIFAVLMGSMMFGQTAPGIAALGVARGAAVEVFEVLDRVPPIDSSSEKGLKPASVEGQVLFDSVGFSY---------------------------------------------------------------------PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTITKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQRIGYVGQEPVLFAGTIALNIANGKLGSTQDEIITAAKAANAHEFIK 493          
BLAST of mRNA_H-elongata_contig51791.12455.1 vs. uniprot
Match: A0A6H5JGF0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF0_9PHAE)

HSP 1 Score: 386 bits (991), Expect = 3.340e-125
Identity = 215/330 (65.15%), Postives = 235/330 (71.21%), Query Frame = 1
Query:    4 QVLSGIRTVASLSSEDIELERYAGHLDGAYNAGVKEGMFKGIGNGALFVSFYFSYALAFWFGTKQVADGNDDRTGGDVLSSIFAVLMGSMMFGQTAPGIAALGTARGAAVEVFETLERVPPIDSSSVEGVKPEKVEGNVQFDSIGFSYVRKKRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMINTIQGKGSVMNVMNAKAYLLFFFISLQTPSPARPLDVVYSSMSLDVPVGKTLALVGPSGGGKSTATKLLLRFYDPTSGCVKLDGVDIRSLNLAWYRKQIGFVGQEPVLFAGTIALNIANGKEGANEDEIIAAAKAANAHQFIK 993
            +VLSGIRTVASL+SE+IELERY  HLDGAY+AGVKEGM KG+GNG LF SFY SYALAFWFGTKQVADG D R+GGDVL++IFAVLMGSMMFGQTAPGIAALG ARGAAVEVFE L+RVPPI SSS +G+KP  VEG V FDS+GFSY                                                                     PARP DVVY S+SL+V VGKTLALVGPSGGGKST TKLLLRFYDPTSG V LDG DI+SLN+AWYR+QIG+VGQEPVLFAGTIALNIANGK GA +DEII AAKAANAH+FIK
Sbjct:  333 EVLSGIRTVASLNSEEIELERYGKHLDGAYHAGVKEGMAKGLGNGMLFTSFYMSYALAFWFGTKQVADG-DGRSGGDVLAAIFAVLMGSMMFGQTAPGIAALGVARGAAVEVFEVLDRVPPIGSSSEKGLKPANVEGQVVFDSVGFSY---------------------------------------------------------------------PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGATQDEIITAAKAANAHEFIK 592          
BLAST of mRNA_H-elongata_contig51791.12455.1 vs. uniprot
Match: D7FHL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL4_ECTSI)

HSP 1 Score: 386 bits (992), Expect = 2.320e-121
Identity = 214/330 (64.85%), Postives = 237/330 (71.82%), Query Frame = 1
Query:    4 QVLSGIRTVASLSSEDIELERYAGHLDGAYNAGVKEGMFKGIGNGALFVSFYFSYALAFWFGTKQVADGNDDRTGGDVLSSIFAVLMGSMMFGQTAPGIAALGTARGAAVEVFETLERVPPIDSSSVEGVKPEKVEGNVQFDSIGFSYVRKKRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMINTIQGKGSVMNVMNAKAYLLFFFISLQTPSPARPLDVVYSSMSLDVPVGKTLALVGPSGGGKSTATKLLLRFYDPTSGCVKLDGVDIRSLNLAWYRKQIGFVGQEPVLFAGTIALNIANGKEGANEDEIIAAAKAANAHQFIK 993
            +VLSGIRTVASL+SE+IEL+RY  HLDGAY+AGVKEGM KG+GNG LF SFY SYALAFWFGTKQVADG D R+GGDVL++IFAVLMGSMMFGQTAPGIAALG ARGAAVEVFE L+RVPPIDSSS +G+KP  VEG V FDS+GFSY                                                                     PARP DVVY S+SL+V VGKTLALVGPSGGGKST TKLLLRFYDPTSG V LDG DI+SLN+AWYR+QIG+VGQEPVLFAGTIALNIANGK G+ +DEIIAAA+AANAH+FIK
Sbjct:  223 EVLSGIRTVASLNSEEIELKRYGKHLDGAYHAGVKEGMAKGLGNGMLFTSFYMSYALAFWFGTKQVADG-DGRSGGDVLAAIFAVLMGSMMFGQTAPGIAALGVARGAAVEVFEVLDRVPPIDSSSEKGLKPANVEGQVVFDSVGFSY---------------------------------------------------------------------PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGSTQDEIIAAARAANAHEFIK 482          
BLAST of mRNA_H-elongata_contig51791.12455.1 vs. uniprot
Match: D7FHL1_ECTSI (ATP-binding cassette, sub-family B (MDR/TAP), member 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL1_ECTSI)

HSP 1 Score: 372 bits (954), Expect = 2.760e-115
Identity = 208/331 (62.84%), Postives = 233/331 (70.39%), Query Frame = 1
Query:    4 QVLSGIRTVASLSSEDIELERYAGHLDGAYNAGVKEGMFKGIGNGALFVSFYFSYALAFWFGTKQVADGNDDRTGGDVLSSIFAVLMGSMMFGQTAPGIAALGTARGAAVEVFETLERVPPIDSSSVEGVKPEKVEGNVQFDSIGFSYVRKKRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMINTIQGKGSVMNVMNAKAYLLFFFISLQTPSPARPLDVVYSSMSLDVPVGKTLALVGPSGGGKSTATKLLLRFYDPTSGCVKLDGVDIRSLNLAWYRKQIGFVGQEPVLFAGTIALNIANGKEGA-NEDEIIAAAKAANAHQFIK 993
            QVLSGIRTVASL SE+IEL+RY+ HLDGAY AGVKEG+  G+GNGALF++FY SY LAFWFGTKQVADG   RTGG+VLSSIFAVLMG+MM GQTAPGI A+G ARGAAVEVFETLER PPIDSSS +G+KP+KVEG V F ++GFSY                                                                     PARP DVVY+S+SL+V VGKTLALVGPSGGGKST TKLLLRFYDPTSG V LDG DI+SLN+AWYR+QIG+VGQEPVLFAGTI LNIANGK GA  +DEI+AAAKAANAH FI+
Sbjct:  253 QVLSGIRTVASLGSEEIELKRYSTHLDGAYAAGVKEGVSTGLGNGALFMAFYSSYGLAFWFGTKQVADGGG-RTGGEVLSSIFAVLMGAMMLGQTAPGITAVGIARGAAVEVFETLERTPPIDSSSKDGLKPDKVEGKVVFHTVGFSY---------------------------------------------------------------------PARPNDVVYNSLSLEVAVGKTLALVGPSGGGKSTVTKLLLRFYDPTSGSVSLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIGLNIANGKHGAATQDEIVAAAKAANAHDFIE 513          
BLAST of mRNA_H-elongata_contig51791.12455.1 vs. uniprot
Match: A0A6H5JRQ1_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ1_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 2.170e-91
Identity = 171/296 (57.77%), Postives = 191/296 (64.53%), Query Frame = 1
Query:    1 QQVLSGIRTVASLSSEDIELERYAGHLDGAYNAGVKEGMFKGIGNGALFVSFYFSYALAFWFGTKQ----------VADGNDDRTGGDVLSSIFAVLMGSMMFGQTAPGIAALGTARGAAVEVFETLERVPPIDSSSVEGVKPEKVEGNVQFDSIGFSYVRKKRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMINTIQGKGSVMNVMNAKAYLLFFFISLQTPSPARPLDVVYSSMSLDVPVGKTLALVGPSGGGKSTATKLLLRFYDPTSGCVKLDGVDIRSLNLAWYRKQ 858
            +QVLSGIRTVASL SE+IEL+RY+ HLDGAY AGVKEG+  G+GNGALF++FY SY LAFWFGTKQ          VADG   RTGG+VLSSIFAVLMG+MM GQTAPGI A+G ARGAAVEVFETLER PPIDSSS  G+KP+KVEG V F ++GFSY                                                                     PARP DVVY+S SL+V VGKTLALVGPSGGGKST TKLLLRFYDPTSG V LDG DI+SLN+AWYR+Q
Sbjct:  211 RQVLSGIRTVASLGSEEIELKRYSTHLDGAYAAGVKEGVSTGLGNGALFMAFYSSYGLAFWFGTKQASLLSMQPLYVADGGG-RTGGEVLSSIFAVLMGAMMLGQTAPGITAVGIARGAAVEVFETLERTPPIDSSSKGGLKPDKVEGKVVFHTVGFSY---------------------------------------------------------------------PARPSDVVYNSFSLEVAVGKTLALVGPSGGGKSTVTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQ 436          
BLAST of mRNA_H-elongata_contig51791.12455.1 vs. uniprot
Match: A0A6H5J5U8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5U8_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 1.070e-90
Identity = 184/338 (54.44%), Postives = 204/338 (60.36%), Query Frame = 1
Query:    4 QVLSGIRTVASLSSEDIELERYAGHLDGAYNAGVKEGMFKGIGNGALFVSFYFSYALAFWFGTKQV--------ADGNDDRTGGDVLSSIFAVLMGSMMFGQTAPGIAALGTARGAAVEVFETLERVPPIDSSSVEGVKPEKVEGNVQFDSIGFSYVRKKRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMINTIQGKGSVMNVMNAKAYLLFFFISLQTPSPARPLDVVYSSMSLDVPVGKTLALVGPSGGGKSTATKLLLRFYDPTSGCVKLDGVDIRSLNLAWYRKQIGFVGQEPVLFAGTIALNIANGKEGANEDEIIAAAKAANAHQFIK 993
            +VLSGIRTVASL+SE+IELERY  HLDGAY+AGVKEGM KG+GNG LF SFY SYALAFWFGTKQV        ADG D R+GGDVL++IFAVLMGSMMFGQTAPGIAALG ARGAAVEVFE L+RVPPIDSSS +G+KP  VEG                                                                                PARP DVVY S+SL+V VGKTLALVGPSGGGKST TKLLLRFYDPTSG V LDG DI+SLN+AWYR+Q+ +        AG                 +IAAAKAANAH+FIK
Sbjct:  177 EVLSGIRTVASLNSEEIELERYGKHLDGAYHAGVKEGMAKGLGNGMLFTSFYMSYALAFWFGTKQVSSATAKAVADG-DGRSGGDVLAAIFAVLMGSMMFGQTAPGIAALGVARGAAVEVFEVLDRVPPIDSSSEKGLKPANVEGQ-------------------------------------------------------------------------------PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQVRYC-------AG-----------------VIAAAKAANAHEFIK 410          
BLAST of mRNA_H-elongata_contig51791.12455.1 vs. uniprot
Match: A0A836CGZ9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ9_9STRA)

HSP 1 Score: 285 bits (728), Expect = 1.330e-83
Identity = 165/337 (48.96%), Postives = 201/337 (59.64%), Query Frame = 1
Query:    4 QVLSGIRTVASLSSEDIELERYAGHLDGAYNAGVKEGMFKGIGNGALFVSFYFSYALAFWFGTKQVADG------NDDRTGGDVLSSIFAVLMGSMMFGQTAPGIAALGTARGAAVEVFETLERVPPIDSSSVEGVKPEKV-EGNVQFDSIGFSYVRKKRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMINTIQGKGSVMNVMNAKAYLLFFFISLQTPSPARPLDVVYSSMSLDVPVGKTLALVGPSGGGKSTATKLLLRFYDPTSGCVKLDGVDIRSLNLAWYRKQIGFVGQEPVLFAGTIALNIANGKEGANEDEIIAAAKAANAHQFIK 993
            +V +GIRTVASL +E  E+ RY  HL  A  AG+K G+  G+G  ++F  FY +YALAFW+G KQV+D        D  +GG V+SS+F VL  SM  GQ +PGI ALG AR +AV +FET+ RVPPID+ S EG +P+K   G ++ + +GF Y                                                                     PARP DVVY  + L V  G+TLALVGPSGGGKST TKLLLRFYDPTSG +KLDG+DIRSLNL WYR+QIG+VGQEPVLFAG+I  NIANGK GA ++EII AAKAANAH+FIK
Sbjct:  184 EVFAGIRTVASLCAEPWEVARYGRHLLSAEKAGIKNGIQNGLGKASMFSCFYLAYALAFWYGIKQVSDDLAAGCTEDCASGGKVISSVFGVLFASMQLGQMSPGITALGLARTSAVIIFETIRRVPPIDAFSTEGARPDKPPSGALRLEGVGFHY---------------------------------------------------------------------PARPDDVVYGRIDLSVAEGETLALVGPSGGGKSTMTKLLLRFYDPTSGAIKLDGMDIRSLNLNWYRQQIGYVGQEPVLFAGSIRDNIANGKPGATDEEIINAAKAANAHEFIK 451          
BLAST of mRNA_H-elongata_contig51791.12455.1 vs. uniprot
Match: A0A836CDG9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG9_9STRA)

HSP 1 Score: 277 bits (709), Expect = 6.130e-81
Identity = 158/336 (47.02%), Postives = 198/336 (58.93%), Query Frame = 1
Query:    4 QVLSGIRTVASLSSEDIELERYAGHLDGAYNAGVKEGMFKGIGNGALFVSFYFSYALAFWFGTKQVADGNDD------RTGGDVLSSIFAVLMGSMMFGQTAPGIAALGTARGAAVEVFETLERVPPIDSSSVEGVKPEKVEGNVQFDSIGFSYVRKKRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMINTIQGKGSVMNVMNAKAYLLFFFISLQTPSPARPLDVVYSSMSLDVPVGKTLALVGPSGGGKSTATKLLLRFYDPTSGCVKLDGVDIRSLNLAWYRKQIGFVGQEPVLFAGTIALNIANGKEGANEDEIIAAAKAANAHQFIK 993
            +V +GIRTVASL +E  E+ RY+ +L  A  AG++ G+  G+G GA+F+SF+ +YALAFW+G KQV+   +D      +TGG V+SSIF VL  SM  GQ  PG+ AL  AR +AV +F+T+ERVP ID  S  G KP    G +  D +GF Y                                                                     PARP +VVY  + + +  G+TLALVGPSGGGKST TKLLLRFYDPTSGC++LDG DIRSLNL WYR+QIG+VGQEPVLF+G+I  NIANGK GA ++EI  AAKAANAH+FIK
Sbjct:  184 EVFAGIRTVASLCAEPWEVVRYSKYLVQAEAAGIRNGLQSGLGQGAVFMSFFLAYALAFWYGIKQVSGDLEDGCVENCQTGGKVISSIFGVLFASMQLGQMTPGLTALSLARASAVAIFKTIERVPAIDPFSDAGAKPATARGALHIDGVGFHY---------------------------------------------------------------------PARPDEVVYGRVDISIQEGETLALVGPSGGGKSTMTKLLLRFYDPTSGCIRLDGADIRSLNLNWYRQQIGYVGQEPVLFSGSIRDNIANGKPGATDEEITNAAKAANAHEFIK 450          
BLAST of mRNA_H-elongata_contig51791.12455.1 vs. uniprot
Match: D8LS12_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS12_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 5.690e-72
Identity = 150/336 (44.64%), Postives = 189/336 (56.25%), Query Frame = 1
Query:    4 QVLSGIRTVASLSSEDIELERYAGHLDGAYNAGVKEGMFKGIGNGALFVSFYFSYALAFWFGTKQVADG------NDDRTGGDVLSSIFAVLMGSMMFGQTAPGIAALGTARGAAVEVFETLERVPPIDSSSVEGVKPEKVEGNVQFDSIGFSYVRKKRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMINTIQGKGSVMNVMNAKAYLLFFFISLQTPSPARPLDVVYSSMSLDVPVGKTLALVGPSGGGKSTATKLLLRFYDPTSGCVKLDGVDIRSLNLAWYRKQIGFVGQEPVLFAGTIALNIANGKEGANEDEIIAAAKAANAHQFIK 993
            +V++ IRTVASL++E+ E++RY+GHLDGA  AG+K                        W+GTK VAD           TGG V+++IF VL+G+M  GQ APG  ALG A+ A   VFETLERVPPID++S EG KP+KVEG ++F  +GFSY                                                                     P RP D V  S+S+ V  G++LALVGPSGGGKST TKLLLRFYDPTSG + LDG D++SLN+ +YR +IG+VGQEPVLFAGTI  N+A+GK  A ++EI+ AAKAANAH FIK
Sbjct:  255 EVIASIRTVASLTAEENEMDRYSGHLDGAEKAGIKXXXXXXXXXXXXXXXXXXXXXXXXWYGTKLVADDIXXXXXXXXATGGQVITTIFGVLIGAMSLGQMAPGATALGQAKQAGYRVFETLERVPPIDAASPEGSKPDKVEGRLEFREVGFSY---------------------------------------------------------------------PTRPDDKVLDSVSISVSPGESLALVGPSGGGKSTVTKLLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDATDEEIVTAAKAANAHDFIK 521          
BLAST of mRNA_H-elongata_contig51791.12455.1 vs. uniprot
Match: A0A835Z4J1_9STRA (ATP-binding cassette, sub-family B, member 1A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J1_9STRA)

HSP 1 Score: 242 bits (618), Expect = 2.460e-68
Identity = 155/362 (42.82%), Postives = 191/362 (52.76%), Query Frame = 1
Query:    7 VLSGIRTVASLSSEDIELERYAGHLDGAYNAGVKEGMFKGIGNGALFVSFYFSYALAFW-----------------------------FGTKQVADG----NDDRTGGDVLSSIFAVLMGSMMFGQTAPGIAALGTARGAAVEVFETLERVPPIDSSSVEGVKPEKVEGNVQFDSIGFSYVRKKRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMINTIQGKGSVMNVMNAKAYLLFFFISLQTPSPARPLDVVYSSMSLDVPVGKTLALVGPSGGGKSTATKLLLRFYDPTSGCVKLDGVDIRSLNLAWYRKQIGFVGQEPVLFAGTIALNIANGKEGANEDEIIAAAKAANAHQFIK 993
            V +GIRTVASL SE +E+ RY   L       VK+GM  G+G G L    + SYALAFW                             +G  QVAD     +D +TGG V+S++FAV+  S+  GQ +PG+ AL  AR +A  +F+T++R P IDS S EG + E   G +  +++ F Y                                                                     PARP   VY  +S+ V  G+TLALVGPSGGGKST TKLLLRFYDPTSG +KLDG+DIRSLNL WYR+QIG+VGQEPVLFAG+I  NIANGK GA +DEII AAKAANAH+FIK
Sbjct:  262 VFAGIRTVASLCSEPLEIARYGKLLIAVEVEEVKKGMLTGVGVGTLMFLLFNSYALAFWSFGGDGTGEAVASGVAPAARQRRRRLRGRYGITQVADDVGCTSDCKTGGKVVSAVFAVMTASVQLGQLSPGLMALSQARTSAAAIFKTIDRRPAIDSFSEEGARLEATRGALSVEAVTFHY---------------------------------------------------------------------PARPDAPVYEGVSVGVAEGETLALVGPSGGGKSTMTKLLLRFYDPTSGAIKLDGMDIRSLNLNWYRQQIGYVGQEPVLFAGSIRDNIANGKPGATDDEIINAAKAANAHEFIK 554          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51791.12455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHL5_ECTSI1.520e-12564.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGF0_9PHAE3.340e-12565.15ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FHL4_ECTSI2.320e-12164.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHL1_ECTSI2.760e-11562.84ATP-binding cassette, sub-family B (MDR/TAP), memb... [more]
A0A6H5JRQ1_9PHAE2.170e-9157.77ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A6H5J5U8_9PHAE1.070e-9054.44ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836CGZ9_9STRA1.330e-8348.96ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
A0A836CDG9_9STRA6.130e-8147.02ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
D8LS12_ECTSI5.690e-7244.64Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835Z4J1_9STRA2.460e-6842.82ATP-binding cassette, sub-family B, member 1A n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51791contigH-elongata_contig51791:36..2827 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score391.0
Seed ortholog evalue5.9e-106
Seed eggNOG ortholog2880.D7FHL4
KEGG koko:K05658
KEGG TC3.A.1.201
KEGG Pathwayko02010,ko04976,ko05206,ko05226,map02010,map04976,map05206,map05226
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1132@1,KOG0055@2759
EC3.6.3.44
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko04090,ko04147
Hectar predicted targeting categoryother localisation
Exons6
Model size1035
Cds size1035
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51791.12455.1prot_H-elongata_contig51791.12455.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig51791 36..2827 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930847.056063-CDS-H-elongata_contig51791:35..1211622930847.056063-CDS-H-elongata_contig51791:35..121Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51791 36..121 -
1691679595.7798097-CDS-H-elongata_contig51791:35..1211691679595.7798097-CDS-H-elongata_contig51791:35..121Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51791 36..121 -
1622930847.0697107-CDS-H-elongata_contig51791:616..7071622930847.0697107-CDS-H-elongata_contig51791:616..707Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51791 617..707 -
1691679595.793724-CDS-H-elongata_contig51791:616..7071691679595.793724-CDS-H-elongata_contig51791:616..707Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51791 617..707 -
1622930847.0827198-CDS-H-elongata_contig51791:1042..12461622930847.0827198-CDS-H-elongata_contig51791:1042..1246Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51791 1043..1246 -
1691679595.801652-CDS-H-elongata_contig51791:1042..12461691679595.801652-CDS-H-elongata_contig51791:1042..1246Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51791 1043..1246 -
1622930847.0958683-CDS-H-elongata_contig51791:1271..13511622930847.0958683-CDS-H-elongata_contig51791:1271..1351Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51791 1272..1351 -
1691679595.8092399-CDS-H-elongata_contig51791:1271..13511691679595.8092399-CDS-H-elongata_contig51791:1271..1351Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51791 1272..1351 -
1622930847.1080577-CDS-H-elongata_contig51791:1602..19781622930847.1080577-CDS-H-elongata_contig51791:1602..1978Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51791 1603..1978 -
1691679595.8166497-CDS-H-elongata_contig51791:1602..19781691679595.8166497-CDS-H-elongata_contig51791:1602..1978Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51791 1603..1978 -
1622930847.1245809-CDS-H-elongata_contig51791:2629..28271622930847.1245809-CDS-H-elongata_contig51791:2629..2827Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51791 2630..2827 -
1691679595.8242276-CDS-H-elongata_contig51791:2629..28271691679595.8242276-CDS-H-elongata_contig51791:2629..2827Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51791 2630..2827 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig51791.12455.1

>prot_H-elongata_contig51791.12455.1 ID=prot_H-elongata_contig51791.12455.1|Name=mRNA_H-elongata_contig51791.12455.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=345bp
QQVLSGIRTVASLSSEDIELERYAGHLDGAYNAGVKEGMFKGIGNGALFV
SFYFSYALAFWFGTKQVADGNDDRTGGDVLSSIFAVLMGSMMFGQTAPGI
AALGTARGAAVEVFETLERVPPIDSSSVEGVKPEKVEGNVQFDSIGFSYV
RKKRKPRRRRLGLALLLFIIIIIIITVLIITMVIIMMINTIQGKGSVMNV
MNAKAYLLFFFISLQTPSPARPLDVVYSSMSLDVPVGKTLALVGPSGGGK
STATKLLLRFYDPTSGCVKLDGVDIRSLNLAWYRKQIGFVGQEPVLFAGT
IALNIANGKEGANEDEIIAAAKAANAHQFIKVKLLRRYVVHAVQ*
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mRNA from alignment at H-elongata_contig51791:36..2827-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig51791.12455.1 ID=mRNA_H-elongata_contig51791.12455.1|Name=mRNA_H-elongata_contig51791.12455.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2792bp|location=Sequence derived from alignment at H-elongata_contig51791:36..2827- (Himanthalia elongata Himel1 dioecious)
CAACAGGTCCTTAGCGGCATCCGCACCGTGGCCTCCCTGAGTTCTGAGGA TATCGAGCTCGAGCGCTACGCTGGGCACCTGGACGGCGCGTACAACGCTG GCGTGAAAGAGGGCATGTTCAAGGGCATCGGTAACGGCGCGCTGTTTGTC TCTTTTTACTTCAGCTACGCCCTCGCCTTCTGGTTCGGCACCAAACAGGT ACTGTACCCCCAGCAGCTTTGATAGTGTTCTACCCACAAGTAGGGTTGCG CTACCGCTCACAGGAGCACTTTGGGATATGCTTCGTTGTATACTGAGTCA TATACAGTAATGATTTGTGCCCCATGTATGTTCGACAGACGGCAAAAAGT TCGCGTCTCGATGCTTTGGTGCTTTGTAGCGTCTGGGCGGGGGAAGTGCA GCCTGCAGAGCACAGCCGTTGCGCTTCTAAAACACATTCTAGCGTGGAAT GTTACTTCGTAGACCCCGTCGTTGTGGGTGAGAATAATTGCTAACAAGCC CCCCCTCCTCCTCCTCACTTCCCACTCGTTGTGGAACACCGCTGCAGCGA AGCGGGAAGAGTCCCTTGCTATGTGTTGAATCTCGTGGGACGCGCTACGA TCCTTTGTTATCGCTATGTATGACGTAAAGCAAGATGTGCATATTAAAAA ACGAACAGCTACTACGTAGCATGTTCCGGACGTTTTTCGTAGGAGAGAGA CTAAAAAAACTCCCCCTTTAGAAAATATAAAAAAAATATATATATTAAGA AACAAAGCAAAATTGCGCGATTTTTCACATCTTTCCCATGACGTTCGCCG CTGTATGTGAACGTCCGCCCTCGCTTCTCCTCTTGCTCGTCGCCGACAGG TTGCCGATGGCAACGATGACCGCACCGGCGGAGACGTGTTGTCGTCGATC TTTGCCGTCCTAATGGGGTCCATGATGTTCGGTCAGACCGCGCCGGGCAT CGCTGCCCTCGGCACCGCTCGCGGGGCGGCGGTGGAGGTGTTCGAGACAC TAGAGCGCGTTCCGCCGATCGACTCGTCGTCTGTTGAGGGCGTTAAGCCT GAGAAGGTTGAGGGGAACGTGCAGTTCGACAGCATCGGCTTCAGCTACGT GAGAAAGAAACGCAAGCCACGAAGAAGGCGGCTTGGGCTGGCTCTGTTGC TGTTTATTATCATCATTATTATCATCACTGTTTTGATTATAACAATGGTG ATAATAATGATGATAAACACGATTCGTACTTTACGGTGATAACGATAACG AAAACTCACCCCGCCAGGAATGGATCCGTGCGTAGGAATAGAAGCAGTAG GGGATACATTCTATACATACATTGCTTCCTAGCGCCGTCCTGAATACGTC GCACGATTCAGACTGGTTACAATTCGAAGTTGTTGATGCTGATTCTCCAG CACCCGCGGTTTCGACAAAAATAAGATCCTGATTGGTGGTCCAAACCCCT GCACCAAAAGCGGGGGGGGGGTGGAGAAGGGAAGGGGTCGGTCATGAACG TCATGAACGCTAAAGCGTATTTATTGTTTTTCTTTATTTCATTGCAAACC CCGTCCGTGCTGAACGCCCTCCAATGCACAGCCGGCTCGACCTCTCGACG TGGTGTACAGCTCGATGAGCCTGGACGTTCCAGTGGGCAAGACCTTGGCG CTCGTGGGACCCTCGGGCGGGGGAAAGTCCACCGCGACGAAGCTCTTGCT GCGGTTTTACGACCCCACGTCCGGGTGCGTGAAGCTTGACGGCGTCGACA TCAGGTCTCTCAACTTGGCCTGGTACAGAAAGCAGGTGAGGTTATATAGT GCTGATGATGCTCCAGTTTCCCGCTAGAAATGCCCTTCCTTATTTTTCAT GGGAAAACATGCTCTTTCGGGCACGGTCAAAGTCCTTTATAGCTGGAAAA CATGCAAAAAATAGAACTCCCCCCCCCACCCCCTGCTTGCGAACTATGAC GGCGGCAAGTTGTAGTGGAAGTTCAAGCGGGACGTAGGGTGGAGGCCTTC TTTCGCCTGCTGCCGTGTGTACAAGTATTATTGTATTTGTTAACTTAACT TGACTTATGTTGGGGTATCCTCATCTTGTTCGCCTTCGATGCCGCCTTGC CTCCCGCGCTATGCGGCTAGATCGGGTTCGTGGGACAAGAACCAGTGCTG TTCGCGGGTACCATTGCTCTCAACATCGCCAACGGAAAGGAGGGCGCCAA TGAGGACGAGAGTGAGAATCTTGATTATGGCGGTGGTACATATTTTGCTC TTGTGATAGGCGGGTTGAGTTCGAGATGGGGTGGATGAAGATATGGATGC ATGGACGCCTTGGTGTAGATAGTCTAAATAGTATGTAGACATGACATATT GCTTGTATGTTTTTTTATAACTTATATGATGTGTGTGACGCATTATATTC GATGCTATTATTATGCTTGACTGGGGTCAGGAAATTAGGGCTGTCCATCG AGGAGTTTTGGACTGTCCAACTCTGACATCACATACGCGTGCTTACTGTG CATGCACCTTTTATTTGAAGATATCTTGGCGTTGATGCTAGCACCCAAGC CCCACGGCCTGTCGAGCCGTTAATATAGAAAAGAAGAGTGGTATAAATGA TAACTTGACTTGCTATCGTCTCGCCTGTCGCTGTGCTCGACTCCCTCGCC TCTTTTCCCGCCGCGTCCGCGACGTGACGCAATATCGTGTGATTTTTCGC GAAAAGTCATCGCCGCTGCCAAGGCGGCCAACGCGCACCAATTCATCAAG GTGAAACTACTACGACGCTACGTTGTTCATGCTGTTCAATAG
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Coding sequence (CDS) from alignment at H-elongata_contig51791:36..2827-

>mRNA_H-elongata_contig51791.12455.1 ID=mRNA_H-elongata_contig51791.12455.1|Name=mRNA_H-elongata_contig51791.12455.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2070bp|location=Sequence derived from alignment at H-elongata_contig51791:36..2827- (Himanthalia elongata Himel1 dioecious)
CAACAGGTCCTTAGCGGCATCCGCACCGTGGCCTCCCTGAGTTCTGAGGA
TATCGAGCTCGAGCGCTACGCTGGGCACCTGGACGGCGCGTACAACGCTG
GCGTGAAAGAGGGCATGTTCAAGGGCATCGGTAACGGCGCGCTGTTTGTC
TCTTTTTACTTCAGCTACGCCCTCGCCTTCTGGTTCGGCACCAAACAGCA
ACAGGTCCTTAGCGGCATCCGCACCGTGGCCTCCCTGAGTTCTGAGGATA
TCGAGCTCGAGCGCTACGCTGGGCACCTGGACGGCGCGTACAACGCTGGC
GTGAAAGAGGGCATGTTCAAGGGCATCGGTAACGGCGCGCTGTTTGTCTC
TTTTTACTTCAGCTACGCCCTCGCCTTCTGGTTCGGCACCAAACAGGTTG
CCGATGGCAACGATGACCGCACCGGCGGAGACGTGTTGTCGTCGATCTTT
GCCGTCCTAATGGGGTCCATGATGTTCGGTCAGACCGCGCCGGGCATCGC
TGCCCTCGGCACCGCTCGCGGGGCGGCGGTGGAGGTGTTCGAGACACTAG
AGCGCGTTCCGCCGATCGACTCGTCGTCTGTTGAGGGCGTTAAGCCTGAG
AAGGTTGAGGGGAACGTGCAGTTCGACAGCATCGGCTTCAGCTACGTGAG
AAAGAAACGCAAGCCACGAAGAAGGCGGCTTGGGCTGGCTCTGTTGCTGT
TTATTATCATCATTATTATCATCACTGTTTTGATTATAACAATGGTGATA
ATAATGATGATAAACACGATTCGTTGCCGATGGCAACGATGACCGCACCG
GCGGAGACGTGTTGTCGTCGATCTTTGCCGTCCTAATGGGGTCCATGATG
TTCGGTCAGACCGCGCCGGGCATCGCTGCCCTCGGCACCGCTCGCGGGGC
GGCGGTGGAGGTGTTCGAGACACTAGAGCGCGTTCCGCCGATCGACTCGT
CGTCTGTTGAGGGCGTTAAGCCTGAGAAGGTTGAGGGGAACGTGCAGTTC
GACAGCATCGGCTTCAGCTACGTGAGAAAGAAACGCAAGCCACGAAGAAG
GCGGCTTGGGCTGGCTCTGTTGCTGTTTATTATCATCATTATTATCATCA
CTGTTTTGATTATAACAATGGTGATAATAATGATGATAAACACGATTCAA
GGGAAGGGGTCGGTCATGAACGTCATGAACGCTAAAGCGTATTTATTGTT
TTTCTTTATTTCATTGCAAACCCCGTCCAAGGGAAGGGGTCGGTCATGAA
CGTCATGAACGCTAAAGCGTATTTATTGTTTTTCTTTATTTCATTGCAAA
CCCCGTCCCCGGCTCGACCTCTCGACGTGGTGTACAGCTCGATGAGCCTG
GACGTTCCAGTGGGCAAGACCTTGGCGCTCGTGGGACCCTCGGGCGGGGG
AAAGTCCACCGCGACGAAGCTCTTGCTGCGGTTTTACGACCCCACGTCCG
GGTGCGTGAAGCTTGACGGCGTCGACATCAGGTCTCTCAACTTGGCCTGG
TACAGAAAGCAGCCGGCTCGACCTCTCGACGTGGTGTACAGCTCGATGAG
CCTGGACGTTCCAGTGGGCAAGACCTTGGCGCTCGTGGGACCCTCGGGCG
GGGGAAAGTCCACCGCGACGAAGCTCTTGCTGCGGTTTTACGACCCCACG
TCCGGGTGCGTGAAGCTTGACGGCGTCGACATCAGGTCTCTCAACTTGGC
CTGGTACAGAAAGCAGATCGGGTTCGTGGGACAAGAACCAGTGCTGTTCG
CGGGTACCATTGCTCTCAACATCGCCAACGGAAAGGAGGGCGCCAATGAG
GACGAGAATCGGGTTCGTGGGACAAGAACCAGTGCTGTTCGCGGGTACCA
TTGCTCTCAACATCGCCAACGGAAAGGAGGGCGCCAATGAGGACGAGATC
ATCGCCGCTGCCAAGGCGGCCAACGCGCACCAATTCATCAAGGTGAAACT
ACTACGACGCTACGTTGTTCATGCTGTTCAATAGTCATCGCCGCTGCCAA
GGCGGCCAACGCGCACCAATTCATCAAGGTGAAACTACTACGACGCTACG
TTGTTCATGCTGTTCAATAG
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