mRNA_H-elongata_contig51729.12447.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig51729.12447.1 vs. uniprot
Match: A0A6H5L7J6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J6_9PHAE) HSP 1 Score: 257 bits (657), Expect = 5.300e-77 Identity = 119/161 (73.91%), Postives = 137/161 (85.09%), Query Frame = 1
Query: 319 IFLETGGKPGSFSAKHAFIEAVPVPRSAVSDAPLYFRQALMEAGEEWSTHKKCIAADPRRGGVRRAVPKGFPYFHVEWEDGGYAHVIEGEEAKFPRNFGVDTLAGAMGIDPPTFGGKGRGSRSSGGPEGVRGAGAAEKERKMVMTFLEKWKDFDWTSELDG 801
IFLETGGKPGS +A+HAFIEAVPVPR+A DAP++FRQALM+AG+EWSTHKKCI +DPRRGG+RRAVPKGFP+FHVEW DGGYA++IEGEEA FPR+FGVDTLAG +G DPP+FGG+GRG G A E+ERK+VM FLEKWK FDWTSELDG
Sbjct: 609 IFLETGGKPGSSAARHAFIEAVPVPRNASLDAPIFFRQALMDAGDEWSTHKKCIPSDPRRGGIRRAVPKGFPFFHVEWADGGYANIIEGEEANFPRDFGVDTLAGILGTDPPSFGGRGRG-------RGADAFXAVEEERKLVMAFLEKWKAFDWTSELDG 762
BLAST of mRNA_H-elongata_contig51729.12447.1 vs. uniprot
Match: D7FQH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH8_ECTSI) HSP 1 Score: 262 bits (669), Expect = 9.350e-77 Identity = 123/162 (75.93%), Postives = 140/162 (86.42%), Query Frame = 1
Query: 316 VIFLETGGKPGSFSAKHAFIEAVPVPRSAVSDAPLYFRQALMEAGEEWSTHKKCIAADPRRGGVRRAVPKGFPYFHVEWEDGGYAHVIEGEEAKFPRNFGVDTLAGAMGIDPPTFGGKGRGSRSSGGPEGVRGAGAAEKERKMVMTFLEKWKDFDWTSELDG 801
VIFLETGGKPGS +A+HAFIEAVPVPR+A DAP+YFRQALM+AG+EWSTHKKCI +DPRRGG+RRAVPKGFP+FHVEWEDGGYA++IEGEEA FPR+FGVDTLAG +GIDPP+FGG+GR GA A E+ERK+VM FLEKWK FDWTSELDG
Sbjct: 994 VIFLETGGKPGSSAARHAFIEAVPVPRNASLDAPMYFRQALMDAGDEWSTHKKCIPSDPRRGGIRRAVPKGFPFFHVEWEDGGYANIIEGEEANFPRDFGVDTLAGILGIDPPSFGGRGRXXXXXRWGXXXXGA-AVEEERKLVMAFLEKWKAFDWTSELDG 1154
BLAST of mRNA_H-elongata_contig51729.12447.1 vs. uniprot
Match: A0A7S4DE16_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DE16_HETAK) HSP 1 Score: 160 bits (405), Expect = 6.210e-46 Identity = 83/163 (50.92%), Postives = 103/163 (63.19%), Query Frame = 1
Query: 313 GVIFLETGGKPGSFSAKHAFIEAVPVPRSAVSDAPLYFRQALMEAGEEWSTHKKCIAADPRRGGVRRAVPKGFPYFHVEWEDGGYAHVIEGEEAKFPRNFGVDTLAGAMGIDPPTFGGKGRGSRSSGGPEGVRGAGAAEKERKMVMTFLEKWKDFDWTSELDG 801
GVIFLET + H +EAVPVP DA LYFRQAL +AG+EW+ H+K I + V RAVPK FPYFHVEWEDGGYAHVIE E+ +FPR+FG + G +G+DPP F +G+ A ++E++ V+ LE WKDFDWT ELDG
Sbjct: 9 GVIFLETSMQ--FHRRPHLCVEAVPVPWETGLDAALYFRQALQDAGDEWAVHRKLIPTKDKP--VHRAVPKEFPYFHVEWEDGGYAHVIEAED-RFPRDFGTQVVCGMLGVDPPRFNRRGQ------------TAVPVDREKEKVLGILEDWKDFDWTKELDG 154
BLAST of mRNA_H-elongata_contig51729.12447.1 vs. uniprot
Match: A0A4D9D0S9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0S9_9STRA) HSP 1 Score: 158 bits (400), Expect = 2.400e-40 Identity = 84/169 (49.70%), Postives = 107/169 (63.31%), Query Frame = 1
Query: 298 GGKSCGVIFLETGGKPGSFSAKHAFIEAVPVPRSAVSDAPLYFRQALMEAGEEWSTHKKCIAADPRRGGVRRAVPKGFPYFHVEWEDG-GYAHVIEGEEAKFPRNFGVDTLAGAMGIDPPTFGGKGRGSRSSGGPEGVRGAGAAEKERKMVMTFLEKWKDFDWTSELDG 801
G K G++FLET G +H IEAVPVPRS +DAPL+F+Q L+E E+W+THKK I D + +R VPKGFPYFHVEWE G GY H++E E +FPR+FG+ +AG +G+DPP F KG+ P G G ER+ V FL +W+ FDWT EL G
Sbjct: 755 GSKGKGILFLETVASVGG-RRRHTVIEAVPVPRSVAADAPLFFKQGLLEVDEQWATHKKLI--DTKGRPLRACVPKGFPYFHVEWEAGQGYVHIVEDRE-QFPRDFGLSVVAGMLGVDPPRFDRKGQ-------PRGNLGL-----ERQAVAGFLREWQPFDWTQELKG 907
BLAST of mRNA_H-elongata_contig51729.12447.1 vs. uniprot
Match: A0A7S4MYL3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MYL3_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.050e-39 Identity = 86/171 (50.29%), Postives = 104/171 (60.82%), Query Frame = 1
Query: 313 GVIFLETGGKPGSFSAKHAFIEAVPVPRSAVSDAPLYFRQALMEAGEEWSTHKKCIAADPRRGGVRRAVPKGFPYFHVEWEDG------GYAHVIEGEEAKFPRNFGVDTLAGAMGIDPPTFGGKGRGSRSSG-GPEGVRGAGAAE-KERKMVMTFLEKWKDFDWTSELDG 801
GV+F+ET F A +E +PVPR DAP+YF+ AL E EEW TH K I R GG+RRAVPK F YFHVEW GYA +IE + FPR+FGVDT+AG MGIDP F KG G+R G RG + E +ER+ V+ F+E WK FDWT +LDG
Sbjct: 121 GVLFVETVLPHKGFW--QARMECIPVPRRVEEDAPIYFKSALTEQAEEWGTHTKIIHTRDRDGGIRRAVPKNFSYFHVEWGGXXXXXXEGYAQIIETND--FPRDFGVDTIAGMMGIDPFGFNRKG-GTRGGGVAASSARGTTSKEDEEREAVLRFVEGWKPFDWTLDLDG 286
BLAST of mRNA_H-elongata_contig51729.12447.1 vs. uniprot
Match: A0A836CIX0_9STRA (CwfJ C-terminus 1-domain-containing protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX0_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.750e-39 Identity = 82/160 (51.25%), Postives = 102/160 (63.75%), Query Frame = 1
Query: 313 GVIFLETGGKPGSFSAKHAFIEAVPVPRSAVSDAPLYFRQALMEAGEEWSTHKKCIAADPRRGGVRRAVPKGFPYFHVEWEDGG-YAHVIEGEEAKFPRNFGVDTLAGAMGIDPPTFGGKGRGSRSSGGPEGVRGAGAAEKERKMVMTFLEKWKDFDWTS 789
G++F+ET G HA I+AVPVP DAPLYF+QAL+EA +EW+THKK I P GG+RRAVP+ F YF VEW GG YAHVIE +E +FP +FG +AG MG+DPP F KG+ GA AAE E+K+V F + W +DWTS
Sbjct: 194 GILFMETA--LGFSKRPHASIDAVPVPLEVEQDAPLYFKQALLEAADEWATHKKVITV-PASGGIRRAVPRNFAYFAVEWGGGGGYAHVIE-QEDRFPADFGRGVVAGMMGVDPPRFNRKGQ------------GASAAE-EQKLVDAFQKHWAPYDWTS 336
BLAST of mRNA_H-elongata_contig51729.12447.1 vs. uniprot
Match: K3WTU0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTU0_GLOUD) HSP 1 Score: 150 bits (379), Expect = 1.600e-37 Identity = 78/170 (45.88%), Postives = 101/170 (59.41%), Query Frame = 1
Query: 316 VIFLETGGKPGSFSAKHAFIEAVPVPRSAVSDAPLYFRQALMEAGEEWSTHKKCIAADPRRGGVRRAVPKGFPYFHVEWE--------DGGYAHVIEGEEAKFPRNFGVDTLAGAMGIDPPTFGGKGRGSRSSGGPEGVRGAGAAEKERKMVMTFLEKWKDFDWTSELDG 801
++F+E P +H IE +PV R D PLYF+Q LM+ EEWSTHKK I D GGV+R VP F YFH+EW GGYAHVIE +E KFP +FGV+ +AG +G+DPP +G + G R S EKE++ V+ FL+ W+ FDWT +LDG
Sbjct: 772 MVFIEQTSAP--HRKRHTVIECIPVDRELALDTPLYFKQELMQVDEEWSTHKKII--DTASGGVKRHVPPQFAYFHIEWAGDLKTGNGSGGYAHVIE-DETKFPPDFGVNVVAGMLGVDPPRYGRRDAGHRRS-----------FEKEKEEVLAFLKDWERFDWTQDLDG 925
BLAST of mRNA_H-elongata_contig51729.12447.1 vs. uniprot
Match: A0A2D4CJ49_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJ49_PYTIN) HSP 1 Score: 143 bits (361), Expect = 1.680e-37 Identity = 75/173 (43.35%), Postives = 102/173 (58.96%), Query Frame = 1
Query: 316 VIFLETGGKPGSFSAKHAFIEAVPVPRSAVSDAPLYFRQALMEAGEEWSTHKKCIAADPRRGGVRRAVPKGFPYFHVEWE-----------DGGYAHVIEGEEAKFPRNFGVDTLAGAMGIDPPTFGGKGRGSRSSGGPEGVRGAGAAEKERKMVMTFLEKWKDFDWTSELDG 801
++F+E P +H +E +PVP+ D PLYF+Q LM+A EEWSTHKK I D GG++R VP F YFH+EW GGYAHVIE EE +FPR+FGV+ +AG +G+DPP +G R ++ S + E++ V+ FL+ W FDWT +LDG
Sbjct: 152 MVFIEQTSAP--HRQRHTIMECIPVPKDVAMDTPLYFKQELMQADEEWSTHKKII--DTTDGGLKRHVPPQFAYFHIEWPATTDKSGRRGGGGGYAHVIEDEE-RFPRDFGVNVVAGMLGVDPPKYGR--RDTKRS-----------FDDEKRDVLNFLKHWNAFDWTQQLDG 306
BLAST of mRNA_H-elongata_contig51729.12447.1 vs. uniprot
Match: A0A8K1FJM4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJM4_PYTOL) HSP 1 Score: 149 bits (375), Expect = 5.380e-37 Identity = 76/168 (45.24%), Postives = 104/168 (61.90%), Query Frame = 1
Query: 316 VIFLETGGKPGSFSAKHAFIEAVPVPRSAVSDAPLYFRQALMEAGEEWSTHKKCIAADPRRGGVRRAVPKGFPYFHVEW------EDGGYAHVIEGEEAKFPRNFGVDTLAGAMGIDPPTFGGKGRGSRSSGGPEGVRGAGAAEKERKMVMTFLEKWKDFDWTSELDG 801
V+FLE P +H ++E +PVP+ D PLYF+Q LM+ EEWSTHKK I GG++R VP F YFH+EW + GGYAHVIE +EA+FPR+FGV+ +AG +G+DPP +G R ++ + E E+ V++FL+ W+ FDWT ELDG
Sbjct: 754 VVFLEQTSAP--HRKRHTYVECIPVPKDVAMDTPLYFKQELMQVDEEWSTHKKIINTSD--GGLKRHVPPQFAYFHIEWPRTNKSDGGGYAHVIE-DEAQFPRDFGVNVVAGMLGVDPPKYGR--RDTKRT-----------FEDEKHDVLSFLKHWEPFDWTKELDG 903
BLAST of mRNA_H-elongata_contig51729.12447.1 vs. uniprot
Match: A0A2D4BJ54_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJ54_PYTIN) HSP 1 Score: 145 bits (366), Expect = 4.880e-36 Identity = 76/173 (43.93%), Postives = 103/173 (59.54%), Query Frame = 1
Query: 316 VIFLETGGKPGSFSAKHAFIEAVPVPRSAVSDAPLYFRQALMEAGEEWSTHKKCIAADPRRGGVRRAVPKGFPYFHVEWE-----------DGGYAHVIEGEEAKFPRNFGVDTLAGAMGIDPPTFGGKGRGSRSSGGPEGVRGAGAAEKERKMVMTFLEKWKDFDWTSELDG 801
++F+E P +H +E +PVP+ D PLYF+Q LM+A EEWSTHKK I D GG++R VP F YFH+EW GGYAHVIE EE +FPR+FGV+ +AG +G+DPP +G R ++ S + E++ V+TFL+ W FDWT +LDG
Sbjct: 512 MVFIEQTSAP--HRQRHTIMECIPVPKDVAMDTPLYFKQELMQADEEWSTHKKII--DTTDGGLKRHVPPQFAYFHIEWPATTDKSGRSGGGGGYAHVIEDEE-RFPRDFGVNVVAGMLGVDPPKYGR--RDTKRS-----------FDDEKRDVLTFLKHWNAFDWTQQLDG 666 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51729.12447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig51729.12447.1 >prot_H-elongata_contig51729.12447.1 ID=prot_H-elongata_contig51729.12447.1|Name=mRNA_H-elongata_contig51729.12447.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=267bp ACDEDVWREIDLFKAALRKMVAASSSRLSRSYGSKSSSPTADAGADTSEIback to top mRNA from alignment at H-elongata_contig51729:253..2257+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig51729.12447.1 ID=mRNA_H-elongata_contig51729.12447.1|Name=mRNA_H-elongata_contig51729.12447.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2005bp|location=Sequence derived from alignment at H-elongata_contig51729:253..2257+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig51729:253..2257+ >mRNA_H-elongata_contig51729.12447.1 ID=mRNA_H-elongata_contig51729.12447.1|Name=mRNA_H-elongata_contig51729.12447.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1602bp|location=Sequence derived from alignment at H-elongata_contig51729:253..2257+ (Himanthalia elongata Himel1 dioecious)back to top |