mRNA_H-elongata_contig51629.12435.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig51629.12435.1 vs. uniprot
Match: D8LB20_ECTSI (Calcium-dependent cytoplasmic cysteine proteinase, papain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB20_ECTSI) HSP 1 Score: 201 bits (512), Expect = 9.860e-61 Identity = 97/122 (79.51%), Postives = 110/122 (90.16%), Query Frame = 1
Query: 1 GVKAEDVMQGAVGDCWLVAAMATLAGSMPGSIRKLFGNSQRSLRCVRVGKYKVRLFDVSRDQWTTIIVDDIIPTRNGKPLFAKPNGKELWVVLLEKAIAKHCGSYSAIAGGYEAWGLKVLTG 366
GVKAEDV QGA+GDCWLVAAMATLAG+MPG+I+KLFGNS+RS R GKYKVRLFD+++D+W TI VDD IPTR+G P+FAKPNGKELWVVLLEKA+AK CGSYS IAGG+EAWGLKVLTG
Sbjct: 112 GVKAEDVKQGALGDCWLVAAMATLAGTMPGAIKKLFGNSERSYR----GKYKVRLFDITQDRWRTITVDDNIPTRHGNPIFAKPNGKELWVVLLEKAVAKFCGSYSNIAGGFEAWGLKVLTG 229
BLAST of mRNA_H-elongata_contig51629.12435.1 vs. uniprot
Match: A0A6H5L4V1_9PHAE (Calpain catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4V1_9PHAE) HSP 1 Score: 135 bits (340), Expect = 3.520e-36 Identity = 61/77 (79.22%), Postives = 71/77 (92.21%), Query Frame = 1
Query: 136 VRVGKYKVRLFDVSRDQWTTIIVDDIIPTRNGKPLFAKPNGKELWVVLLEKAIAKHCGSYSAIAGGYEAWGLKVLTG 366
+RVGKYKVRLFD+++++W TI VDD IPTR+G P+FAKPNGKELWVVLLEKA+AK CGSYS IAGG+EAWGLKVLTG
Sbjct: 14 LRVGKYKVRLFDITQERWRTITVDDNIPTRHGNPIFAKPNGKELWVVLLEKAVAKFCGSYSNIAGGFEAWGLKVLTG 90
BLAST of mRNA_H-elongata_contig51629.12435.1 vs. uniprot
Match: A0A6U5W761_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A6U5W761_GUITH) HSP 1 Score: 127 bits (318), Expect = 1.710e-32 Identity = 56/118 (47.46%), Postives = 85/118 (72.03%), Query Frame = 1
Query: 13 EDVMQGAVGDCWLVAAMATLAGSMPGSIRKLFGNSQRSLRCVRVGKYKVRLFDVSRDQWTTIIVDDIIPTRNGKPLFAKPNGKELWVVLLEKAIAKHCGSYSAIAGGYEAWGLKVLTG 366
ED+ QG +GDCWL+AA+A L+ G+I + F + S+R G YK++L+D R++W +I+DD +PT +G+P+FA+PNG+E+WV+LLEKA AK CG Y ++AGG+ W + +TG
Sbjct: 81 EDIAQGQLGDCWLLAALACLS-ERAGAIERCFETREISVR----GLYKLKLYDGQREEWVRMIIDDYLPTEHGQPIFAQPNGREIWVLLLEKAFAKFCGDYQSLAGGHILWAFQAMTG 193
BLAST of mRNA_H-elongata_contig51629.12435.1 vs. uniprot
Match: R1DIU9_EMIHU (Calpain catalytic domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DIU9_EMIHU) HSP 1 Score: 121 bits (304), Expect = 1.200e-31 Identity = 63/124 (50.81%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 1 GVKAEDVMQGAVGDCWLVAAMATLAGSMPGSIRKLFGNSQRSLRCVRVGKYKVRLFDVSRDQWTTIIVDDIIP--TRNGKPLFAKPNGKELWVVLLEKAIAKHCGSYSAIAGGYEAWGLKVLTG 366
G++ D+ QGA+GDCWL+AA A LA PG ++ LF + S R GKY +RL+DV W + VDD P +RNG+PLFA+P ELWV+LLEKA AK+CGSY + GG W L V+TG
Sbjct: 124 GIQPADIAQGALGDCWLLAAAACLA-EFPGVLQNLFEQTHVSPR----GKYALRLWDVVGQAWMRVCVDDFFPCDSRNGQPLFAQPADGELWVLLLEKAFAKYCGSYGELQGGLTLWALHVMTG 242
BLAST of mRNA_H-elongata_contig51629.12435.1 vs. uniprot
Match: A0A7S1SL14_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SL14_9CHLO) HSP 1 Score: 124 bits (312), Expect = 1.890e-31 Identity = 62/123 (50.41%), Postives = 84/123 (68.29%), Query Frame = 1
Query: 4 VKAEDVMQGAVGDCWLVAAMATLAGSMPGSIRKLFGNSQRSLRCVRVGKYKVRLFDVSRDQWTTIIVDDIIPT--RNGKPLFAKPNGKELWVVLLEKAIAKHCGSYSAIAGGYEAWGLKVLTG 366
+ D+ QG +GDCWL++A A LA + PG+I+++F N + GKYK++LF ++W I +DD IP RNG+PLFAKP G E WV+LLEKA AK+CGSYSA+ GG+ W L+ LTG
Sbjct: 97 INPSDIQQGKLGDCWLLSAFACLA-NYPGAIQRVFCNKTLN----HYGKYKIKLFSRPLNKWVVIKIDDRIPCDPRNGEPLFAKPVGSEAWVMLLEKAFAKYCGSYSALDGGHTLWALEALTG 214
BLAST of mRNA_H-elongata_contig51629.12435.1 vs. uniprot
Match: F0XXB9_AURAN (Calpain catalytic domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXB9_AURAN) HSP 1 Score: 123 bits (308), Expect = 2.750e-31 Identity = 58/121 (47.93%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 4 VKAEDVMQGAVGDCWLVAAMATLAGSMPGSIRKLFGNSQRSLRCVRVGKYKVRLFDVSRDQWTTIIVDDIIPTRNGKPLFAKPNGKELWVVLLEKAIAKHCGSYSAIAGGYEAWGLKVLTG 366
++A+DV QGA+GDCWL++A+A + G+I+++F + + + R GKY V LFD+ +W TI+VDD+ P +NGK +F++PNG E WV++LEKA AK CGSY AI GG W + +TG
Sbjct: 50 IEAKDVCQGALGDCWLLSAIACMT-EFHGAIQQIFYSHKANPR----GKYYVELFDIQAGKWVTIVVDDLFPHKNGKLMFSQPNGDEEWVLILEKAFAKLCGSYHAIEGGLVLWAFQAMTG 165
BLAST of mRNA_H-elongata_contig51629.12435.1 vs. uniprot
Match: A0A7S0N3J2_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N3J2_9CHLO) HSP 1 Score: 121 bits (304), Expect = 3.790e-30 Identity = 60/123 (48.78%), Postives = 82/123 (66.67%), Query Frame = 1
Query: 4 VKAEDVMQGAVGDCWLVAAMATLAGSMPGSIRKLFGNSQRSLRCVRVGKYKVRLFDVSRDQWTTIIVDDIIPTRNG--KPLFAKPNGKELWVVLLEKAIAKHCGSYSAIAGGYEAWGLKVLTG 366
++ +DV QGAVGDCWL+AA A LA PG+I+K+F + + R KY+VRL+D +W T+ +DD IP G K F+KPNG E+WV+LLEKA AK CGSY+ + GG+ W + +TG
Sbjct: 127 IEPQDVAQGAVGDCWLIAAFACLA-EFPGAIQKVFVTREWNTR----RKYQVRLYDGFHQRWETVTIDDRIPVEKGTNKAAFSKPNGNEMWVILLEKAFAKFCGSYANLDGGHTVWAWQAMTG 244
BLAST of mRNA_H-elongata_contig51629.12435.1 vs. uniprot
Match: A0A0M0JH90_9EUKA (Calpain catalytic domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JH90_9EUKA) HSP 1 Score: 121 bits (304), Expect = 4.390e-30 Identity = 60/124 (48.39%), Postives = 79/124 (63.71%), Query Frame = 1
Query: 1 GVKAEDVMQGAVGDCWLVAAMATLAGSMPGSIRKLFGNSQRSLRCVRVGKYKVRLFDVSRDQWTTIIVDDIIPTRN--GKPLFAKPNGKELWVVLLEKAIAKHCGSYSAIAGGYEAWGLKVLTG 366
GV D+ QGAVGDCWL++A+ +A PG + K+F + S R GKY +RLFD W T+ +DD++P G+ LFA+P G+ELWV+LLEKA AK CGSY + GG E W + LTG
Sbjct: 136 GVSVSDIAQGAVGDCWLMSALCCMA-EHPGQLYKIFVQNAYSDR----GKYSIRLFDGRAGMWVTVTIDDLLPVEKATGRLLFAQPKGRELWVLLLEKAFAKFCGSYEGLNGGNEIWAFEALTG 254
BLAST of mRNA_H-elongata_contig51629.12435.1 vs. uniprot
Match: A0A7S1AKB1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AKB1_NOCSC) HSP 1 Score: 120 bits (301), Expect = 1.150e-29 Identity = 60/128 (46.88%), Postives = 86/128 (67.19%), Query Frame = 1
Query: 4 VKAEDVMQGAVGDCWLVAAMATLAGSMPGSIRKLFGNSQRSLRCVRVGKYKVRLFDVSRDQWTTIIVDDIIP-------TRNGKPLFAKPNGKELWVVLLEKAIAKHCGSYSAIAGGYEAWGLKVLTG 366
V ++D+ QGA+GDCWL+AAMA LA G+I LF +R+ R GKY++RLF+ ++W I++DD IP ++N +PLF +PN ELWV+LLEKA AK CG+Y+A+ GG W ++ +TG
Sbjct: 147 VNSKDICQGALGDCWLLAAMACLA-EHSGAIDALFRTKERNPR----GKYRLRLFNGVTEEWEKILIDDFIPCDEQSVASKNPRPLFTRPNQNELWVMLLEKAFAKFCGNYAALEGGTTIWAIRAMTG 269
BLAST of mRNA_H-elongata_contig51629.12435.1 vs. uniprot
Match: A0A7S0J7G9_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J7G9_9EUKA) HSP 1 Score: 119 bits (297), Expect = 1.520e-29 Identity = 63/124 (50.81%), Postives = 80/124 (64.52%), Query Frame = 1
Query: 1 GVKAEDVMQGAVGDCWLVAAMATLAGSMPGSIRKLFGNSQRSLRCVRVGKYKVRLFDVSRDQWTTIIVDDIIPTRNG--KPLFAKPNGKELWVVLLEKAIAKHCGSYSAIAGGYEAWGLKVLTG 366
G++ D+ QGAVGDCWLVAA+A+ A P IR F + + R G YKVRL D +W T+++DD IP + G +P F K +GKELW VLLEKA AK CGSY+A+ GG+ WG LTG
Sbjct: 135 GIEPADLCQGAVGDCWLVAALAS-AAEHPSCIRNAFRMFEANSR----GMYKVRLSDPETQRWKTVVIDDRIPCKKGTNQPEFMKCDGKELWAVLLEKAFAKFCGSYAALDGGWCVWGWAALTG 253 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51629.12435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig51629.12435.1 >prot_H-elongata_contig51629.12435.1 ID=prot_H-elongata_contig51629.12435.1|Name=mRNA_H-elongata_contig51629.12435.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp MQGAVGDCWLVAAMATLAGSMPGSIRKLFGNSQRSLRCVRVGKYKVRLFDback to top mRNA from alignment at H-elongata_contig51629:637..1702- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig51629.12435.1 ID=mRNA_H-elongata_contig51629.12435.1|Name=mRNA_H-elongata_contig51629.12435.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1066bp|location=Sequence derived from alignment at H-elongata_contig51629:637..1702- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig51629:637..1702- >mRNA_H-elongata_contig51629.12435.1 ID=mRNA_H-elongata_contig51629.12435.1|Name=mRNA_H-elongata_contig51629.12435.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=690bp|location=Sequence derived from alignment at H-elongata_contig51629:637..1702- (Himanthalia elongata Himel1 dioecious)back to top |