mRNA_H-elongata_contig51613.12433.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig51613.12433.1
Unique NamemRNA_H-elongata_contig51613.12433.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: D7FXL4_ECTSI (Mitochondrial intermediate peptidase (N-terminal) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL4_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 5.080e-122
Identity = 195/280 (69.64%), Postives = 218/280 (77.86%), Query Frame = 1
Query:    1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEGSSELFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYG--ARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGT 834
            +VQVLERLM +RHKLA +VGF+SHAHR  S+KMAE P+++ RFL+ALS  IR+KAEQEA MLR+AKM++EGSSEL+AWDISYY+G VKSRECNLDG SLSEYFTLG CL+GLRMVC GLF  SLE+VPIE  ENWA         GGVRKLVLRH+ EGVLGT+YLDLHRR+GKFGHAAHFTVRCGC               YQLPTVVLVCNFGLPEPP  G  A+  +E  G         DD RLMSHSE ETLFHEFGHALHSLLSRTELQHVS +
Sbjct:  378 NVQVLERLMAVRHKLALRVGFDSHAHRMASEKMAENPEEIARFLEALSAGIRDKAEQEASMLRQAKMEVEGSSELYAWDISYYMGYVKSRECNLDGRSLSEYFTLGGCLEGLRMVCRGLFSISLEQVPIEPGENWAGRSG-----GGVRKLVLRHEQEGVLGTIYLDLHRREGKFGHAAHFTVRCGC---------------YQLPTVVLVCNFGLPEPPPDGGNAKQSKERSGK--------DDGRLMSHSEVETLFHEFGHALHSLLSRTELQHVSAS 629          
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: A0A835ZB07_9STRA (Putative mitochondrial intermediate peptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB07_9STRA)

HSP 1 Score: 263 bits (672), Expect = 1.220e-79
Identity = 141/304 (46.38%), Postives = 181/304 (59.54%), Query Frame = 1
Query:    1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEGSSE--LFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVL 906
            + +VLE L+  R +LA  +GF+S AHR+  DKM ++P +VL FL+ LS +++ KA  E + L+  K ++EG +   +  WD+ +Y+G  K+R   LDG+++S YFTL  C+ GL  +C+GLFG  LEE  +   E W    A   G   VRKL L H  +G LGTVYLDL  R GKF HAAH+T+RCG                YQ P V LV +FGLPE                   A H    RL+SH E ETL HEFGHALHSLLSRTE QH SGTR PVD+ E+PSHL+E+F WD   L
Sbjct:  212 NAKVLEDLVDARQRLASSLGFDSFAHRSAVDKMLQSPDEVLAFLEDLSSSVKGKARDELQQLQDLKTEVEGEAAGPVQPWDLHFYMGHAKARRYRLDGSAISSYFTLDGCVAGLAKLCEGLFGIRLEERALAEGEAWDGGAARAAGAVAVRKLALSHPTKGDLGTVYLDLGARPGKFVHAAHYTIRCGVL--------------YQRPIVALVASFGLPE-------------------ASH--GQRLLSHGELETLLHEFGHALHSLLSRTEFQHASGTRAPVDWVEVPSHLLEYFAWDERCL 480          
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: W7TEG5_9STRA (Mitochondrial intermediate peptidase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEG5_9STRA)

HSP 1 Score: 261 bits (666), Expect = 7.090e-78
Identity = 144/312 (46.15%), Postives = 195/312 (62.50%), Query Frame = 1
Query:    1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEG----SSELFAWDISYYIGRVKSRE--CNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVLRKFA 918
            +++VL RL+  R  LA+K+GF S+AHR  +DKMA+ P++V RFL AL++ +R KA +E E+L++AK + EG    S++  +WD+SYY+G VKS     + DG  +S Y +L +CL GL ++   LFG  L EV ++  E WA +E+ +      +K+VL H   G LGT+YLDL+ R  K+ H A FTVRCGC           G + YQLP V LVCNF   +P               G +        L++H+E E LFHEFGHALHSLLSRT  QHV+GTR PVDF E PSHL+E+FVWD+ VL +FA
Sbjct:  306 NLEVLSRLIKSRDTLARKLGFPSYAHRFLADKMAKCPEEVDRFLRALAENVRAKAGKELEVLQRAKQEDEGGWGDSADFHSWDLSYYMGAVKSARHGASTDGKGVSAYLSLENCLRGLALLSQRLFGIELREVALDETEAWAPAESKL------KKVVLLHPRHGQLGTIYLDLYPRQAKYTHHAQFTVRCGCLPA--------GASSYQLPVVALVCNFSPCDP--------------AGPV--------LLTHAELEALFHEFGHALHSLLSRTRFQHVAGTRAPVDFVETPSHLLEYFVWDQRVLAQFA 581          
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: A0A4D9D5F5_9STRA (Peptidase_M3 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5F5_9STRA)

HSP 1 Score: 263 bits (671), Expect = 2.810e-76
Identity = 145/312 (46.47%), Postives = 195/312 (62.50%), Query Frame = 1
Query:    1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEG----SSELFAWDISYYIGRVKS--RECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVLRKFA 918
            +++VL RL+  R  LA+K+GF S+AHR  +DKMA+ P++V RFL AL++ +R KA +E E+LR+AK + EG    S++  +WD+SYY+G VKS     + DG  +S Y +L +CL GL ++   LFG  L EV ++  E WA +E+ +      +K+VL H   G LGT+YLDL+ R  K+ H A FTVRCGC           G + YQLP V LVCNF   +P               G +        L++H+E E LFHEFGHALHSLLSRT  QHV+GTR PVDF E PSHL+E+FVWD+ VL +FA
Sbjct:  771 NLEVLSRLIKSRDTLARKLGFPSYAHRFLADKMAKCPEEVDRFLRALAENVRAKAVKELEVLRRAKQEDEGGWGDSADFHSWDLSYYMGAVKSARHSASTDGKGVSAYLSLENCLRGLALLSQRLFGIELREVALDETEAWAPAESKL------KKVVLLHPRHGQLGTIYLDLYPRQAKYTHHAQFTVRCGCLPA--------GASSYQLPVVALVCNFSPCDP--------------AGPV--------LLTHAELEALFHEFGHALHSLLSRTRFQHVAGTRAPVDFVETPSHLLEYFVWDQRVLAQFA 1046          
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: A0A6H5L5U6_9PHAE (Peptidase_M3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U6_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 2.490e-75
Identity = 123/170 (72.35%), Postives = 143/170 (84.12%), Query Frame = 1
Query:    1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEGSSELFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHR 510
            +VQVLERLM +RHKLA++VGF+SHAHR  S+KMAE P+++ RFL+ALS  IR+KAEQEA MLRKAKM++EGSSEL+AWD+SYY+G VKSRECNLDG SLSEYFTLG CL+GLRMVC GLF  SLE+VPIE  ENWA          GVRKLVLRH+ EGVLGT+YLDLHR
Sbjct:  378 NVQVLERLMAVRHKLARRVGFDSHAHRMASEKMAENPEEIARFLEALSAGIRDKAEQEASMLRKAKMEVEGSSELYAWDVSYYMGYVKSRECNLDGRSLSEYFTLGGCLEGLRMVCRGLFSISLEQVPIEPGENWAGRSGR-----GVRKLVLRHEQEGVLGTIYLDLHR 542          
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: A0A8K1FJW8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJW8_PYTOL)

HSP 1 Score: 245 bits (626), Expect = 2.650e-72
Identity = 133/310 (42.90%), Postives = 176/310 (56.77%), Query Frame = 1
Query:    1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEGSSE---LFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVLRKFAR 921
            ++ +L+ L   RH LAQ +GFES AH   SD+M  +P+++  F+ + S  ++ KA +E ++L  AK   EG S    +  WD+ YY+G +K+R+  +D   L+ YF L  CLDGLR+VC  LFG  L   P+E  E+W            V+KL L+      LG +YLDL+ R  K+ HAAHFTVRCG  ++P         T YQ P V LVCNF  P P                          L++HSE ETLFHEFGH +HS+LSRTE QH SGTR  +DF E PSHL E+F WD  V+R+FAR
Sbjct:  287 NLVILDELREKRHALAQLLGFESFAHFAMSDRMMTSPEEITSFVTSFSSKLKPKATEELQVLINAKKSHEGRSSRDGVAMWDLQYYMGMLKARQYRIDSRVLASYFPLERCLDGLRIVCRELFGLELVSTPMEQHESWHPD---------VQKLTLKTQRGETLGCIYLDLYPRRHKYNHAAHFTVRCGKRLSP---------TEYQTPLVALVCNFNKPAP----------------------SAPTLLNHSEVETLFHEFGHVMHSMLSRTEFQHFSGTRTAMDFVETPSHLFEYFAWDYRVVREFAR 556          
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: K3X1H8_GLOUD (Peptidase_M3 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1H8_GLOUD)

HSP 1 Score: 243 bits (619), Expect = 1.730e-71
Identity = 130/309 (42.07%), Postives = 183/309 (59.22%), Query Frame = 1
Query:    1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEG--SSELFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVLRKFAR 921
            ++  L+ L   RH+LAQ +GFE++AH  TSD++  +P+ V +F+  +S+ + + A+ E ++L  AK  LEG  ++E+F WDI YY+G +K+++  +D   ++ YF L  CL+GL ++C  LFG  L+ +P+   E+W         D  VRKL L  + E  LG +Y DL+ R  K+ +AAHFT+RCG  +  ED         YQ P V LVCNF  P P                          L++HSE ETLFHEFGHA+HSLLSRTE QH+SGTR  +DF E PSHL E+F WD   +R+FAR
Sbjct:  259 NLSTLDELRRKRHELAQLLGFETYAHFATSDRLVGSPEAVEKFIANISNQLMQNAQGEKQLLLAAKQRLEGRGATEVFMWDIPYYMGMLKAQKYRIDSRVIASYFPLERCLEGLHVLCSSLFGMELKSLPMGKSESW---------DSEVRKLALTKNGE-TLGYIYFDLYPRRNKYTNAAHFTIRCGKRLAGEDK--------YQKPIVALVCNFSKPAP----------------------YSPSLLTHSEVETLFHEFGHAMHSLLSRTEFQHLSGTRAQLDFVETPSHLFEYFAWDYRFVREFAR 527          
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: A0A388LQH1_CHABU (Peptidase_M3 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LQH1_CHABU)

HSP 1 Score: 248 bits (633), Expect = 1.980e-71
Identity = 136/307 (44.30%), Postives = 178/307 (57.98%), Query Frame = 1
Query:    1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEGSSELFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVLRKFAR 921
            ++ VLE L+  RH+LA+ +GF S AH      +A +P  +L+FL  LSD +R KAE+E ++L + K   +  S++ AWD ++Y G VK+R  NLD  +++ YF+L  CL GL ++   LFG  L E+ +   E WA           + KL L HD EG LG +YLDL+ R  K+ HAAHFT+RCG  I+  +         YQLP V LVCNF  P        A    LG                H E ETLFHEFGHALHSLLSRTE QH+SGTR  +DF E PS+LME+F WD  +L +FAR
Sbjct:  292 NLAVLENLIATRHELAELLGFPSFAHYMVQPLVARSPDAILKFLHELSDKLRPKAEEELKLLMECKQSTKPESDIHAWDRAFYNGLVKARTYNLDARTVAAYFSLQGCLSGLSLLTKSLFGVELREIQMPPGEAWAPD---------IMKLALSHDTEGDLGYIYLDLYPRPNKYPHAAHFTLRCGRRISESE---------YQLPVVALVCNFPRP------LAASPSLLG----------------HGELETLFHEFGHALHSLLSRTEFQHLSGTRAALDFVETPSNLMEYFAWDYRLLSRFAR 558          
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: A0A7S0G314_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G314_9RHOD)

HSP 1 Score: 234 bits (597), Expect = 5.340e-71
Identity = 133/312 (42.63%), Postives = 186/312 (59.62%), Query Frame = 1
Query:    1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMA-ETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEGSSE---LFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGP-TGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVLRKFAR 921
            +++VL+ L+ +R  LA  + F+++   +  D+ + E+P   + FL++LS  + +KA+QE ++L+  K + EG+     ++ WD SYY+ + K++  + DG+SL EYF+L +C+DG+ M+   LFG  L E      E W +          V+K+ +RH+ EGVLG +YLDL+ R GK+ HAA FT+RCG          E+GP   YQ P V LVCNF                  + G          L+SH EAETLFHEFGHA HSLLSRT+ QH+SGTR PVDF EIPSHL EHF+WD  VL KFAR
Sbjct:   20 NIEVLKDLLYVREDLACALSFDNYLSISLRDRASTESP---MNFLESLSKEVEQKAKQEVKILKTLKTEAEGAGSGGHIYPWDRSYYMAQAKAKTRS-DGSSLCEYFSLSACVDGMGMLVKRLFGIDLLECEASENELWHSD---------VKKMQMRHETEGVLGYIYLDLYPRAGKYNHAAQFTIRCG---------REQGPGLDYQKPVVALVCNF----------------TNVSGSHPV------LLSHGEAETLFHEFGHACHSLLSRTKFQHLSGTRGPVDFVEIPSHLFEHFIWDHRVLSKFAR 287          
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: A0A1Y1HTE0_KLENI (Zincin-like metalloproteases family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HTE0_KLENI)

HSP 1 Score: 243 bits (620), Expect = 1.210e-70
Identity = 140/307 (45.60%), Postives = 182/307 (59.28%), Query Frame = 1
Query:    1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEGSSELFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVLRKFAR 921
            ++ VL+ L+  RH++AQ +GF S+A       MA TP  V+ FL+ LS  ++  AE+E  +L + K   E  S + +WD  YY+G +K++  NLD   ++EYF+L  CL GL ++   LFG +L EVP+   E WA          GVRK VL H  EGVLG +YLDL  R GK+ HAAHFT+RCG           +G   +QLP V LVCN  LP PP+ GA +                   L+SH E ET+FHEFGHALH+LLSRTE QH+SGTR  +DF E PS+L+E FV D  VLR FAR
Sbjct:  394 NLPVLDELIATRHEVAQLLGFNSYADFFLRPLMARTPDAVVTFLETLSTELKGPAEKEFALLSQVKQQYEPGSPVRSWDRGYYVGLLKAKAHNLDARVIAEYFSLEHCLAGLALLTSRLFGMALREVPLAPGEGWA---------NGVRKFVLTHQDEGVLGVIYLDLFPRTGKYTHAAHFTLRCG---------RRQGDHDWQLPAVALVCN--LP-PPQNGAPS-------------------LLSHGEVETMFHEFGHALHTLLSRTEYQHLSGTRGKLDFIETPSNLLELFVDDHRVLRHFAR 660          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXL4_ECTSI5.080e-12269.64Mitochondrial intermediate peptidase (N-terminal) ... [more]
A0A835ZB07_9STRA1.220e-7946.38Putative mitochondrial intermediate peptidase n=1 ... [more]
W7TEG5_9STRA7.090e-7846.15Mitochondrial intermediate peptidase n=2 Tax=Nanno... [more]
A0A4D9D5F5_9STRA2.810e-7646.47Peptidase_M3 domain-containing protein n=1 Tax=Nan... [more]
A0A6H5L5U6_9PHAE2.490e-7572.35Peptidase_M3 domain-containing protein n=1 Tax=Ect... [more]
A0A8K1FJW8_PYTOL2.650e-7242.90Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3X1H8_GLOUD1.730e-7142.07Peptidase_M3 domain-containing protein n=1 Tax=Glo... [more]
A0A388LQH1_CHABU1.980e-7144.30Peptidase_M3 domain-containing protein n=1 Tax=Cha... [more]
A0A7S0G314_9RHOD5.340e-7142.63Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1Y1HTE0_KLENI1.210e-7045.60Zincin-like metalloproteases family protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51613contigH-elongata_contig51613:86..3991 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score367.1
Seed ortholog evalue7.9e-99
Seed eggNOG ortholog2880.D7FXL4
KEGG koko:K01410
EggNOG free text desc.protein processing involved in protein targeting to mitochondrion
EggNOG OGsCOG0339@1,KOG2090@2759
EC3.4.24.59
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMitochondrial intermediate peptidase (N-terminal)
Ec32 orthologEc-28_002150.1
Exons9
Model size924
Cds size900
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51613.12433.1prot_H-elongata_contig51613.12433.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig51613 110..3991 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930844.561642-UTR-H-elongata_contig51613:85..1091622930844.561642-UTR-H-elongata_contig51613:85..109Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51613 86..109 +
1691679594.6638439-UTR-H-elongata_contig51613:85..1091691679594.6638439-UTR-H-elongata_contig51613:85..109Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51613 86..109 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930844.5740254-CDS-H-elongata_contig51613:109..1391622930844.5740254-CDS-H-elongata_contig51613:109..139Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 110..139 +
1691679594.6768873-CDS-H-elongata_contig51613:109..1391691679594.6768873-CDS-H-elongata_contig51613:109..139Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 110..139 +
1622930844.5886111-CDS-H-elongata_contig51613:572..6921622930844.5886111-CDS-H-elongata_contig51613:572..692Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 573..692 +
1691679594.688404-CDS-H-elongata_contig51613:572..6921691679594.688404-CDS-H-elongata_contig51613:572..692Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 573..692 +
1622930844.6020343-CDS-H-elongata_contig51613:1218..13161622930844.6020343-CDS-H-elongata_contig51613:1218..1316Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 1219..1316 +
1691679594.7006147-CDS-H-elongata_contig51613:1218..13161691679594.7006147-CDS-H-elongata_contig51613:1218..1316Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 1219..1316 +
1622930844.6168606-CDS-H-elongata_contig51613:1587..16931622930844.6168606-CDS-H-elongata_contig51613:1587..1693Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 1588..1693 +
1691679594.714124-CDS-H-elongata_contig51613:1587..16931691679594.714124-CDS-H-elongata_contig51613:1587..1693Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 1588..1693 +
1622930844.6324358-CDS-H-elongata_contig51613:2188..23191622930844.6324358-CDS-H-elongata_contig51613:2188..2319Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 2189..2319 +
1691679594.724929-CDS-H-elongata_contig51613:2188..23191691679594.724929-CDS-H-elongata_contig51613:2188..2319Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 2189..2319 +
1622930844.645563-CDS-H-elongata_contig51613:2746..28431622930844.645563-CDS-H-elongata_contig51613:2746..2843Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 2747..2843 +
1691679594.7336302-CDS-H-elongata_contig51613:2746..28431691679594.7336302-CDS-H-elongata_contig51613:2746..2843Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 2747..2843 +
1622930844.6644194-CDS-H-elongata_contig51613:3029..31401622930844.6644194-CDS-H-elongata_contig51613:3029..3140Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 3030..3140 +
1691679594.7422512-CDS-H-elongata_contig51613:3029..31401691679594.7422512-CDS-H-elongata_contig51613:3029..3140Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 3030..3140 +
1622930844.6812649-CDS-H-elongata_contig51613:3430..35421622930844.6812649-CDS-H-elongata_contig51613:3430..3542Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 3431..3542 +
1691679594.7560117-CDS-H-elongata_contig51613:3430..35421691679594.7560117-CDS-H-elongata_contig51613:3430..3542Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 3431..3542 +
1622930844.6986885-CDS-H-elongata_contig51613:3896..39911622930844.6986885-CDS-H-elongata_contig51613:3896..3991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 3897..3991 +
1691679594.7646956-CDS-H-elongata_contig51613:3896..39911691679594.7646956-CDS-H-elongata_contig51613:3896..3991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51613 3897..3991 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig51613.12433.1

>prot_H-elongata_contig51613.12433.1 ID=prot_H-elongata_contig51613.12433.1|Name=mRNA_H-elongata_contig51613.12433.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=300bp
MMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQE
AEMLRKAKMDLEGSSELFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSC
LDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVE
GVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTV
VLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHE
FGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVLRKFAR*
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mRNA from alignment at H-elongata_contig51613:86..3991+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig51613.12433.1 ID=mRNA_H-elongata_contig51613.12433.1|Name=mRNA_H-elongata_contig51613.12433.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3906bp|location=Sequence derived from alignment at H-elongata_contig51613:86..3991+ (Himanthalia elongata Himel1 dioecious)
TCGGTTCAGGTGTTGGAGCGCTTGATGATGATCCGGCATAAGCTGGCGCA AAAGGTCGGATTTTTTTCTTCCCTCTCTCTCTCTCTCTCTCGGGAAGTAC ATTAAAAATAAGCTATTTCGCCGAACGATCCTATCAATTTGTTTGGTCAG AGGACGGCTCAACTACCTCGTTTGTTTTTTGTTGTTCTCGTTCTTGTGTG TGTGTGTGTGTGTGTGTGTTTTTATCTTTCCGACTCACGCGGGAAAAACC ATCTTGCATTGAGGAATGGCAGTTATCAATCCTTGCGTGGTGGCTCTCAA GGCTATCGAAAGAGCATCGATCGTGGCACACATACTGGGGTGAGAATGAA CGTATGCCTGCCGAGAATCATACAGAACGAGCGCCAGGCATCACGAAGAA TGCCTTCACGGCAAGGTTCTCCTTCCACAGTCTCGAGCACCCCCCCCACC CCCCCTCCGTTCTCCCATGTATCATCGGGTTTTTCAGGTAGGGTTTGAGT CCCACGCTCACAGGACGACGTCGGACAAAATGGCAGAGACCCCCCAAGAT GTTTTGAGGTTCCTGGATGCTCTCTCGGACGCGATCAGGGAGAAGGCCGA GCAGGAAGTAAGCATTTGATTTGCCGTTGCGGCCCGCTGCCCTCGCCGCC CTTGCCGCCAAACGAGATGAATCAAACCAAAAAAGAGACGCGTGTGACGT CACGCCTGAGTTGGAGAAGGGGGGGGGAGGTAGAACGCGGCGCGCTTTCG TTGAACTTGCTGTCATTTTTTTTTTTGCTTTTGTGATGTTGCCATCCCAT TTAATCTGGACGTCACCTTTGTGGACGCACCAGCCGGGGATGTAGGTCAC ACAGGAGGAATGTAGGTCACACAGGATTTCTCCACCTTCCTCGTGCGTTT CTTGCCTTAATTTCTTCATCGTGAGAAAGATTCAGCAGTCCATTTCCGTC GTCGACCGTGAAGTCGAATTTTGTGTACCCATGAAATAATCGTAATCGTT CTCCACTTGTTGGGGCATGATGGTAGAAAAAATCCTAGCTCGGGTGAATA CGCCGAGATTCGAACCCACGTCCCAACGTCAGAAAGTTTCGAGGTTACTA ACTGAACCATCGGGGCCACTGGTGATGACACAGGCGGAAATGCTTCGGAA GGCGAAGATGGACCTGGAGGGATCCTCCGAGCTCTTCGCCTGGGACATTT CGTACTACATAGGCCGTGTCAAGTCTCGAGAGTGAGCGTAAACTCAGCCC CCCCCACCACCCTTAGGTAACTTAGCCATATAATATGCCTTGCATCCATC GCCCGGCGCGCACGACACAACACTAGGAGATATCATCGTACCCGAGCAGT GGTAGTCCCGTGGCAAGTAGAAGGCCAATCCTCTCCGCCCATCGCCAATC TTGTTTCCTTTCTCGTCTCTATCGCGTCGCCGCCGCGTTTTTGTTGAGGC CGTTGGTAAAATTCCCGGTATATTTTTGTTTCGTTTTGGCAACAACAAAA AGGTGCAACTTGGACGGAACATCTCTCTCCGAGTATTTTACTCTCGGCAG CTGCCTCGATGGGCTAAGAATGGTCTGCGACGGGCTCTTCGGGAGCTCGT TGGAAGAGGTATCCTTCACGAAAGAGGGTATGGGGGGGGGGGGAAGAGAT ATAGAGATATGGAGGGATGTACGAGTGTGAACAGGAAGGCGTTCTCGTGG CGCTGCTCTGCTGCTGTATGCCAGTGGTGTCCTTTCTTCCTTCCTCCATC TCGGCGCAGTGCGGTCATGGTAGGGGGTGGCCACACCTCGCGCGTTTGAT GCGTAAGCGTTTCCTTCGGGGTTTTTGAGCTCGTGCCCCCTGTGTATGTG TTTCTGTGTGTCTGCGTGTTTGTTTCCTTATCTACTTACGTATCTTTGCG TCTAAATTGGTGGCATGGTGTCGATTGGTCGGCGCCGGCGTGGCCACATC AGCTCTCCAGTGGATAAATAAGTTCGACCGCCAAACGTACGTAAATATAG TTTCAGATGCCGCAAGGTTCCGCCGAGGAGCGAAAGCGACACGATATAGA GACACCAGGGATTCGCACGCGCAGTCATCCCTAACGGTTGTCGATCTCAA CAGGTGCCGATTGAGAGCCGAGAGAACTGGGCTGCCAGCGAGGCCCCGGT GGGGGGTGACGGGGGCGTGCGCAAGCTAGTGCTGAGGCACGACGTGGAAG GCGTTCTCGGCACGGTCTACCTGGACCTGCACAGGTCGGAACGGCCCATT CGCCTATCGTTCGGGGCAATCTTGCGAGACTGTCTCGTGATAATTTCCTG AATACCCCTCTCTCCCTCTCCAACGATATGAACACGTCTGACTGGACAGT GCGGGATTTGATACTGCCAAGGGAGGGGGGGCGGGCGGTTCATAACTCTC TCTCTCTCTCTCTCTCTCTCTCTCCCCAGCCACTCTCTTGAAATGGACTG CTGATCCGCGGTGATTTCGTAGCTCAAGACCGGGGAGAATATTGCGCAGT ATTGGTTCCTTGATACCACCAACACCTGCTGGAGAAGCATAATTTTGCAA CCCGGAGATGATCGAGCTTTAACGATGAGGAAGGACTCTTTTTGCTCGAT CGATCGATGGATCCCCCCGCATGCGTCACTACCTTCCCATCTCCTCGATC GCGGCAAACAGGCGGGATGGAAAGTTCGGGCACGCGGCGCACTTCACAGT GCGATGCGGGTGCGCGATCACCCCAGAAGACGGGGACGCGGAAAGGGGGC CGACGGGGGTGAAGGTGAGAAAAAATGCGAGTTTAATTATCGTCGATGGT TGCCATGGGCCATGAAAGGATGCACAAACTCGCCGATCGTGCCTGGTAAA AACACCGGAGGACATACCAAAAATCCTGAGTTGGGTCATCCCATGCCTTC GGCTGCGCCCCCCCCACCTCCCCCCGATCTCGCTGCTTACGCAGTACCAA CTCCCGACGGTGGTGCTCGTTTGCAATTTTGGCCTCCCCGAACCCCCACG ATACGGAGCAAGGGCGGGACGAGAGGCTCTTGGGATGGAGGGGGACATCG CAAAGGTGAATGGTCCGGTGATCAAAACCCTCAAGCAATCGTGCATCATG ATTAGTACGTTGTTTCGCCTGCTGTGGCCATGTACGAGGAGAGATGGACT GTGTGCATCGCCACGCGGTGTTCTTGTAGGTAACCCCCGGGCAACGCGTT GCCCAGGATTTGCCGTTAGCTGCGGGGGGAGGGGTCAAATAGGATCGCGT ATGACTTTATTCATTTCAGTGGAAACCGCCACCCGTTTCTCTACCAGCAC CAGTCAACGCCGCCGTGGTTCGAAACCCCTCCGCAGGCTGACAAGCACCT CGATGATTCGAGGCTCATGTCGCACTCTGAGGCGGAGACGTTGTTCCACG AGTTCGGGCACGCTCTGCACTCACTGCTCTCGCGCACCGAGCTCCAGCAC GTGTCGGGTGAGTTCACCCCCCCGCCCCCCCCCTCCCCCTCCGCTTCGGG TCGCCGGGTTTGTATGCGCGGGGCGCCTCGGCTGTTTTTTNNNNNNNNNN TGGATTTGTATGCGCGAGGCGCTTCGCTTGTTTTTTTCACGACTAATCGT GACCCAAGCACAATGTGAAGCTCTACTGAGCAGCGTGTTTTTGAGAGTGA GTACCCCTTGGCGAAAGACAAGACATGTAACGGTGGTCGCGGTAAGGAAA CAGGGATGGATTTTGAAGCTTTTTTTTTATCTGATTTATTTCATCACGTC CACACACAACATCTGAGCAAGCAATATTCCATTATGAAAATGCGCCTTTT TACCCTCCCAGGGACGCGTGTACCGGTGGACTTCTGCGAGATCCCGTCCC ACTTGATGGAACACTTTGTATGGGATAGGAACGTTCTGCGAAAGTTCGCG AGGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig51613:86..3991+

>mRNA_H-elongata_contig51613.12433.1 ID=mRNA_H-elongata_contig51613.12433.1|Name=mRNA_H-elongata_contig51613.12433.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1800bp|location=Sequence derived from alignment at H-elongata_contig51613:86..3991+ (Himanthalia elongata Himel1 dioecious)
ATGATGATCCGGCATAAGCTGGCGCAAAAGATGATGATCCGGCATAAGCT
GGCGCAAAAGGTAGGGTTTGAGTCCCACGCTCACAGGACGACGTCGGACA
AAATGGCAGAGACCCCCCAAGATGTTTTGAGGTTCCTGGATGCTCTCTCG
GACGCGATCAGGGAGAAGGCCGAGCAGGAAGTAGGGTTTGAGTCCCACGC
TCACAGGACGACGTCGGACAAAATGGCAGAGACCCCCCAAGATGTTTTGA
GGTTCCTGGATGCTCTCTCGGACGCGATCAGGGAGAAGGCCGAGCAGGAA
GCGGAAATGCTTCGGAAGGCGAAGATGGACCTGGAGGGATCCTCCGAGCT
CTTCGCCTGGGACATTTCGTACTACATAGGCCGTGTCAAGTCTCGAGAGC
GGAAATGCTTCGGAAGGCGAAGATGGACCTGGAGGGATCCTCCGAGCTCT
TCGCCTGGGACATTTCGTACTACATAGGCCGTGTCAAGTCTCGAGAGTGC
AACTTGGACGGAACATCTCTCTCCGAGTATTTTACTCTCGGCAGCTGCCT
CGATGGGCTAAGAATGGTCTGCGACGGGCTCTTCGGGAGCTCGTTGGAAG
AGGTGCAACTTGGACGGAACATCTCTCTCCGAGTATTTTACTCTCGGCAG
CTGCCTCGATGGGCTAAGAATGGTCTGCGACGGGCTCTTCGGGAGCTCGT
TGGAAGAGGTGCCGATTGAGAGCCGAGAGAACTGGGCTGCCAGCGAGGCC
CCGGTGGGGGGTGACGGGGGCGTGCGCAAGCTAGTGCTGAGGCACGACGT
GGAAGGCGTTCTCGGCACGGTCTACCTGGACCTGCACAGGTGCCGATTGA
GAGCCGAGAGAACTGGGCTGCCAGCGAGGCCCCGGTGGGGGGTGACGGGG
GCGTGCGCAAGCTAGTGCTGAGGCACGACGTGGAAGGCGTTCTCGGCACG
GTCTACCTGGACCTGCACAGGCGGGATGGAAAGTTCGGGCACGCGGCGCA
CTTCACAGTGCGATGCGGGTGCGCGATCACCCCAGAAGACGGGGACGCGG
AAAGGGGGCCGACGGGGGCGGGATGGAAAGTTCGGGCACGCGGCGCACTT
CACAGTGCGATGCGGGTGCGCGATCACCCCAGAAGACGGGGACGCGGAAA
GGGGGCCGACGGGGTACCAACTCCCGACGGTGGTGCTCGTTTGCAATTTT
GGCCTCCCCGAACCCCCACGATACGGAGCAAGGGCGGGACGAGAGGCTCT
TGGGATGGAGGGGGACATCGCAAAGTACCAACTCCCGACGGTGGTGCTCG
TTTGCAATTTTGGCCTCCCCGAACCCCCACGATACGGAGCAAGGGCGGGA
CGAGAGGCTCTTGGGATGGAGGGGGACATCGCAAAGCACCTCGATGATTC
GAGGCTCATGTCGCACTCTGAGGCGGAGACGTTGTTCCACGAGTTCGGGC
ACGCTCTGCACTCACTGCTCTCGCGCACCGAGCTCCAGCACGTGTCGGCA
CCTCGATGATTCGAGGCTCATGTCGCACTCTGAGGCGGAGACGTTGTTCC
ACGAGTTCGGGCACGCTCTGCACTCACTGCTCTCGCGCACCGAGCTCCAG
CACGTGTCGGGGACGCGTGTACCGGTGGACTTCTGCGAGATCCCGTCCCA
CTTGATGGAACACTTTGTATGGGATAGGAACGTTCTGCGAAAGTTCGCGA
GGTGAGGACGCGTGTACCGGTGGACTTCTGCGAGATCCCGTCCCACTTGA
TGGAACACTTTGTATGGGATAGGAACGTTCTGCGAAAGTTCGCGAGGTGA
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