mRNA_H-elongata_contig51613.12433.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: D7FXL4_ECTSI (Mitochondrial intermediate peptidase (N-terminal) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL4_ECTSI) HSP 1 Score: 377 bits (969), Expect = 5.080e-122 Identity = 195/280 (69.64%), Postives = 218/280 (77.86%), Query Frame = 1
Query: 1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEGSSELFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYG--ARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGT 834
+VQVLERLM +RHKLA +VGF+SHAHR S+KMAE P+++ RFL+ALS IR+KAEQEA MLR+AKM++EGSSEL+AWDISYY+G VKSRECNLDG SLSEYFTLG CL+GLRMVC GLF SLE+VPIE ENWA GGVRKLVLRH+ EGVLGT+YLDLHRR+GKFGHAAHFTVRCGC YQLPTVVLVCNFGLPEPP G A+ +E G DD RLMSHSE ETLFHEFGHALHSLLSRTELQHVS +
Sbjct: 378 NVQVLERLMAVRHKLALRVGFDSHAHRMASEKMAENPEEIARFLEALSAGIRDKAEQEASMLRQAKMEVEGSSELYAWDISYYMGYVKSRECNLDGRSLSEYFTLGGCLEGLRMVCRGLFSISLEQVPIEPGENWAGRSG-----GGVRKLVLRHEQEGVLGTIYLDLHRREGKFGHAAHFTVRCGC---------------YQLPTVVLVCNFGLPEPPPDGGNAKQSKERSGK--------DDGRLMSHSEVETLFHEFGHALHSLLSRTELQHVSAS 629
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: A0A835ZB07_9STRA (Putative mitochondrial intermediate peptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB07_9STRA) HSP 1 Score: 263 bits (672), Expect = 1.220e-79 Identity = 141/304 (46.38%), Postives = 181/304 (59.54%), Query Frame = 1
Query: 1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEGSSE--LFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVL 906
+ +VLE L+ R +LA +GF+S AHR+ DKM ++P +VL FL+ LS +++ KA E + L+ K ++EG + + WD+ +Y+G K+R LDG+++S YFTL C+ GL +C+GLFG LEE + E W A G VRKL L H +G LGTVYLDL R GKF HAAH+T+RCG YQ P V LV +FGLPE A H RL+SH E ETL HEFGHALHSLLSRTE QH SGTR PVD+ E+PSHL+E+F WD L
Sbjct: 212 NAKVLEDLVDARQRLASSLGFDSFAHRSAVDKMLQSPDEVLAFLEDLSSSVKGKARDELQQLQDLKTEVEGEAAGPVQPWDLHFYMGHAKARRYRLDGSAISSYFTLDGCVAGLAKLCEGLFGIRLEERALAEGEAWDGGAARAAGAVAVRKLALSHPTKGDLGTVYLDLGARPGKFVHAAHYTIRCGVL--------------YQRPIVALVASFGLPE-------------------ASH--GQRLLSHGELETLLHEFGHALHSLLSRTEFQHASGTRAPVDWVEVPSHLLEYFAWDERCL 480
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: W7TEG5_9STRA (Mitochondrial intermediate peptidase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEG5_9STRA) HSP 1 Score: 261 bits (666), Expect = 7.090e-78 Identity = 144/312 (46.15%), Postives = 195/312 (62.50%), Query Frame = 1
Query: 1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEG----SSELFAWDISYYIGRVKSRE--CNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVLRKFA 918
+++VL RL+ R LA+K+GF S+AHR +DKMA+ P++V RFL AL++ +R KA +E E+L++AK + EG S++ +WD+SYY+G VKS + DG +S Y +L +CL GL ++ LFG L EV ++ E WA +E+ + +K+VL H G LGT+YLDL+ R K+ H A FTVRCGC G + YQLP V LVCNF +P G + L++H+E E LFHEFGHALHSLLSRT QHV+GTR PVDF E PSHL+E+FVWD+ VL +FA
Sbjct: 306 NLEVLSRLIKSRDTLARKLGFPSYAHRFLADKMAKCPEEVDRFLRALAENVRAKAGKELEVLQRAKQEDEGGWGDSADFHSWDLSYYMGAVKSARHGASTDGKGVSAYLSLENCLRGLALLSQRLFGIELREVALDETEAWAPAESKL------KKVVLLHPRHGQLGTIYLDLYPRQAKYTHHAQFTVRCGCLPA--------GASSYQLPVVALVCNFSPCDP--------------AGPV--------LLTHAELEALFHEFGHALHSLLSRTRFQHVAGTRAPVDFVETPSHLLEYFVWDQRVLAQFA 581
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: A0A4D9D5F5_9STRA (Peptidase_M3 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5F5_9STRA) HSP 1 Score: 263 bits (671), Expect = 2.810e-76 Identity = 145/312 (46.47%), Postives = 195/312 (62.50%), Query Frame = 1
Query: 1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEG----SSELFAWDISYYIGRVKS--RECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVLRKFA 918
+++VL RL+ R LA+K+GF S+AHR +DKMA+ P++V RFL AL++ +R KA +E E+LR+AK + EG S++ +WD+SYY+G VKS + DG +S Y +L +CL GL ++ LFG L EV ++ E WA +E+ + +K+VL H G LGT+YLDL+ R K+ H A FTVRCGC G + YQLP V LVCNF +P G + L++H+E E LFHEFGHALHSLLSRT QHV+GTR PVDF E PSHL+E+FVWD+ VL +FA
Sbjct: 771 NLEVLSRLIKSRDTLARKLGFPSYAHRFLADKMAKCPEEVDRFLRALAENVRAKAVKELEVLRRAKQEDEGGWGDSADFHSWDLSYYMGAVKSARHSASTDGKGVSAYLSLENCLRGLALLSQRLFGIELREVALDETEAWAPAESKL------KKVVLLHPRHGQLGTIYLDLYPRQAKYTHHAQFTVRCGCLPA--------GASSYQLPVVALVCNFSPCDP--------------AGPV--------LLTHAELEALFHEFGHALHSLLSRTRFQHVAGTRAPVDFVETPSHLLEYFVWDQRVLAQFA 1046
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: A0A6H5L5U6_9PHAE (Peptidase_M3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U6_9PHAE) HSP 1 Score: 249 bits (636), Expect = 2.490e-75 Identity = 123/170 (72.35%), Postives = 143/170 (84.12%), Query Frame = 1
Query: 1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEGSSELFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHR 510
+VQVLERLM +RHKLA++VGF+SHAHR S+KMAE P+++ RFL+ALS IR+KAEQEA MLRKAKM++EGSSEL+AWD+SYY+G VKSRECNLDG SLSEYFTLG CL+GLRMVC GLF SLE+VPIE ENWA GVRKLVLRH+ EGVLGT+YLDLHR
Sbjct: 378 NVQVLERLMAVRHKLARRVGFDSHAHRMASEKMAENPEEIARFLEALSAGIRDKAEQEASMLRKAKMEVEGSSELYAWDVSYYMGYVKSRECNLDGRSLSEYFTLGGCLEGLRMVCRGLFSISLEQVPIEPGENWAGRSGR-----GVRKLVLRHEQEGVLGTIYLDLHR 542
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: A0A8K1FJW8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJW8_PYTOL) HSP 1 Score: 245 bits (626), Expect = 2.650e-72 Identity = 133/310 (42.90%), Postives = 176/310 (56.77%), Query Frame = 1
Query: 1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEGSSE---LFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVLRKFAR 921
++ +L+ L RH LAQ +GFES AH SD+M +P+++ F+ + S ++ KA +E ++L AK EG S + WD+ YY+G +K+R+ +D L+ YF L CLDGLR+VC LFG L P+E E+W V+KL L+ LG +YLDL+ R K+ HAAHFTVRCG ++P T YQ P V LVCNF P P L++HSE ETLFHEFGH +HS+LSRTE QH SGTR +DF E PSHL E+F WD V+R+FAR
Sbjct: 287 NLVILDELREKRHALAQLLGFESFAHFAMSDRMMTSPEEITSFVTSFSSKLKPKATEELQVLINAKKSHEGRSSRDGVAMWDLQYYMGMLKARQYRIDSRVLASYFPLERCLDGLRIVCRELFGLELVSTPMEQHESWHPD---------VQKLTLKTQRGETLGCIYLDLYPRRHKYNHAAHFTVRCGKRLSP---------TEYQTPLVALVCNFNKPAP----------------------SAPTLLNHSEVETLFHEFGHVMHSMLSRTEFQHFSGTRTAMDFVETPSHLFEYFAWDYRVVREFAR 556
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: K3X1H8_GLOUD (Peptidase_M3 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1H8_GLOUD) HSP 1 Score: 243 bits (619), Expect = 1.730e-71 Identity = 130/309 (42.07%), Postives = 183/309 (59.22%), Query Frame = 1
Query: 1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEG--SSELFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVLRKFAR 921
++ L+ L RH+LAQ +GFE++AH TSD++ +P+ V +F+ +S+ + + A+ E ++L AK LEG ++E+F WDI YY+G +K+++ +D ++ YF L CL+GL ++C LFG L+ +P+ E+W D VRKL L + E LG +Y DL+ R K+ +AAHFT+RCG + ED YQ P V LVCNF P P L++HSE ETLFHEFGHA+HSLLSRTE QH+SGTR +DF E PSHL E+F WD +R+FAR
Sbjct: 259 NLSTLDELRRKRHELAQLLGFETYAHFATSDRLVGSPEAVEKFIANISNQLMQNAQGEKQLLLAAKQRLEGRGATEVFMWDIPYYMGMLKAQKYRIDSRVIASYFPLERCLEGLHVLCSSLFGMELKSLPMGKSESW---------DSEVRKLALTKNGE-TLGYIYFDLYPRRNKYTNAAHFTIRCGKRLAGEDK--------YQKPIVALVCNFSKPAP----------------------YSPSLLTHSEVETLFHEFGHAMHSLLSRTEFQHLSGTRAQLDFVETPSHLFEYFAWDYRFVREFAR 527
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: A0A388LQH1_CHABU (Peptidase_M3 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LQH1_CHABU) HSP 1 Score: 248 bits (633), Expect = 1.980e-71 Identity = 136/307 (44.30%), Postives = 178/307 (57.98%), Query Frame = 1
Query: 1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEGSSELFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVLRKFAR 921
++ VLE L+ RH+LA+ +GF S AH +A +P +L+FL LSD +R KAE+E ++L + K + S++ AWD ++Y G VK+R NLD +++ YF+L CL GL ++ LFG L E+ + E WA + KL L HD EG LG +YLDL+ R K+ HAAHFT+RCG I+ + YQLP V LVCNF P A LG H E ETLFHEFGHALHSLLSRTE QH+SGTR +DF E PS+LME+F WD +L +FAR
Sbjct: 292 NLAVLENLIATRHELAELLGFPSFAHYMVQPLVARSPDAILKFLHELSDKLRPKAEEELKLLMECKQSTKPESDIHAWDRAFYNGLVKARTYNLDARTVAAYFSLQGCLSGLSLLTKSLFGVELREIQMPPGEAWAPD---------IMKLALSHDTEGDLGYIYLDLYPRPNKYPHAAHFTLRCGRRISESE---------YQLPVVALVCNFPRP------LAASPSLLG----------------HGELETLFHEFGHALHSLLSRTEFQHLSGTRAALDFVETPSNLMEYFAWDYRLLSRFAR 558
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: A0A7S0G314_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G314_9RHOD) HSP 1 Score: 234 bits (597), Expect = 5.340e-71 Identity = 133/312 (42.63%), Postives = 186/312 (59.62%), Query Frame = 1
Query: 1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMA-ETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEGSSE---LFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGP-TGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVLRKFAR 921
+++VL+ L+ +R LA + F+++ + D+ + E+P + FL++LS + +KA+QE ++L+ K + EG+ ++ WD SYY+ + K++ + DG+SL EYF+L +C+DG+ M+ LFG L E E W + V+K+ +RH+ EGVLG +YLDL+ R GK+ HAA FT+RCG E+GP YQ P V LVCNF + G L+SH EAETLFHEFGHA HSLLSRT+ QH+SGTR PVDF EIPSHL EHF+WD VL KFAR
Sbjct: 20 NIEVLKDLLYVREDLACALSFDNYLSISLRDRASTESP---MNFLESLSKEVEQKAKQEVKILKTLKTEAEGAGSGGHIYPWDRSYYMAQAKAKTRS-DGSSLCEYFSLSACVDGMGMLVKRLFGIDLLECEASENELWHSD---------VKKMQMRHETEGVLGYIYLDLYPRAGKYNHAAQFTIRCG---------REQGPGLDYQKPVVALVCNF----------------TNVSGSHPV------LLSHGEAETLFHEFGHACHSLLSRTKFQHLSGTRGPVDFVEIPSHLFEHFIWDHRVLSKFAR 287
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Match: A0A1Y1HTE0_KLENI (Zincin-like metalloproteases family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HTE0_KLENI) HSP 1 Score: 243 bits (620), Expect = 1.210e-70 Identity = 140/307 (45.60%), Postives = 182/307 (59.28%), Query Frame = 1
Query: 1 SVQVLERLMMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEAEMLRKAKMDLEGSSELFAWDISYYIGRVKSRECNLDGTSLSEYFTLGSCLDGLRMVCDGLFGSSLEEVPIESRENWAASEAPVGGDGGVRKLVLRHDVEGVLGTVYLDLHRRDGKFGHAAHFTVRCGCAITPEDGDAERGPTGYQLPTVVLVCNFGLPEPPRYGARAGREALGMEGDIAKHLDDSRLMSHSEAETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRNVLRKFAR 921
++ VL+ L+ RH++AQ +GF S+A MA TP V+ FL+ LS ++ AE+E +L + K E S + +WD YY+G +K++ NLD ++EYF+L CL GL ++ LFG +L EVP+ E WA GVRK VL H EGVLG +YLDL R GK+ HAAHFT+RCG +G +QLP V LVCN LP PP+ GA + L+SH E ET+FHEFGHALH+LLSRTE QH+SGTR +DF E PS+L+E FV D VLR FAR
Sbjct: 394 NLPVLDELIATRHEVAQLLGFNSYADFFLRPLMARTPDAVVTFLETLSTELKGPAEKEFALLSQVKQQYEPGSPVRSWDRGYYVGLLKAKAHNLDARVIAEYFSLEHCLAGLALLTSRLFGMALREVPLAPGEGWA---------NGVRKFVLTHQDEGVLGVIYLDLFPRTGKYTHAAHFTLRCG---------RRQGDHDWQLPAVALVCN--LP-PPQNGAPS-------------------LLSHGEVETMFHEFGHALHTLLSRTEYQHLSGTRGKLDFIETPSNLLELFVDDHRVLRHFAR 660 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51613.12433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig51613.12433.1 >prot_H-elongata_contig51613.12433.1 ID=prot_H-elongata_contig51613.12433.1|Name=mRNA_H-elongata_contig51613.12433.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=300bp MMIRHKLAQKVGFESHAHRTTSDKMAETPQDVLRFLDALSDAIREKAEQEback to top mRNA from alignment at H-elongata_contig51613:86..3991+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig51613.12433.1 ID=mRNA_H-elongata_contig51613.12433.1|Name=mRNA_H-elongata_contig51613.12433.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3906bp|location=Sequence derived from alignment at H-elongata_contig51613:86..3991+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig51613:86..3991+ >mRNA_H-elongata_contig51613.12433.1 ID=mRNA_H-elongata_contig51613.12433.1|Name=mRNA_H-elongata_contig51613.12433.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1800bp|location=Sequence derived from alignment at H-elongata_contig51613:86..3991+ (Himanthalia elongata Himel1 dioecious)back to top |