mRNA_H-elongata_contig51360.12395.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig51360.12395.1
Unique NamemRNA_H-elongata_contig51360.12395.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A835Z4N5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N5_9STRA)

HSP 1 Score: 130 bits (327), Expect = 7.600e-31
Identity = 79/180 (43.89%), Postives = 118/180 (65.56%), Query Frame = 3 
Query:    3 LATAFSDMGETDSALEAVQTGLKTDPKNGDLLRLRRSLKAKHSATVSAAQKGGAGSKSVGSQRGGGTIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEIIK 542
            L+ A  ++GE D ALEAV  GLK +P N DL R  R +K K +A  S A++GG G+         G +D+QT +E +ELS Q   T+RELAEV A LQ  +R+ +R  LT  E+ G+    ++Y+SVGK+F+L +K+EI  +LD++  E+ K+E QL+ K+ YLE RL S++ NL+E+++
Sbjct:   85 LSAAQLELGEVDKALEAVTEGLKKEPSNADLTRQLRVVKGKKAAAASKARQGGGGAP--------GGLDKQTFEEIRELSDQSEVTQRELAEVSANLQGCLRDQRRAQLTKTEVAGLGGDARLYRSVGKVFMLNSKKEIDTLLDAQATERAKSEEQLKGKKAYLENRLNSQKTNLNELLR 256
[Close]
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A7S2SWL7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SWL7_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.910e-20
Identity = 65/183 (35.52%), Postives = 107/183 (58.47%), Query Frame = 3 
Query:    3 LATAFSDMGETDSALEAVQTGLKTDPKNGDLLRLRRSLKAKHSATVSAAQKGGAGSKSVGSQRGGGTIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEIIKNIQ 551
            LA A  ++GE D+A   ++ GLK DP   DL RL R +KAK +A  SA +         G Q     +     +E +E+S Q   T R+L EV A+L+   +E +R  +   E++ + EAT +YQS+GKMF+L+ +EEI + L    + Q K  A L++++ YL++RL S++ N+ ++ +++Q
Sbjct:   91 LANAQYELGELDAAASTIREGLKKDPNMPDLSRLLRKIKAKKAAIASARK---------GKQT---NVSESMRKEIEEMSEQYKQTGRDLQEVRARLEATAKEQRRIAVMSNEVEHLPEATPLYQSIGKMFMLRPREEIKSTLTENAEGQEKRLADLKSREQYLQRRLHSQEENMKDLFQSLQ 261
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BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A6V2AJX7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2AJX7_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.070e-14
Identity = 65/190 (34.21%), Postives = 102/190 (53.68%), Query Frame = 3 
Query:    3 LATAFSDMGETDSALEAVQTGLKTDPKNGDLLRLRRSLKAKHSATVSAAQKGGAGSKSVGSQRGGG-------TIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDG--VKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEIIKN 545
            LATA +++G  D+A+  ++ G+  +P N  L +L R +KAK +    A            +  G G       T DR+ L    +L  Q  T+ RE   V+A +    RE+K   LT  EL+   V E  KMY+ +GKMF+L T+ +I N LD+  +E++K E  L+ K  YLE+++ S+Q N+ E+ K+
Sbjct:   80 LATAQTELGNWDAAIATIKQGMNVEPDNSQLSKLLRQVKAKRANAKRAXXXXXXXXXXXSNTSGVGPTTSFASTTDRELL----DLQEQFITSNREYNTVKANIHKSQREVKMNELTKAELETIPVTEDAKMYRGIGKMFMLSTRGDIMNHLDTCVEEESKREESLKNKAEYLERKMKSQQLNIQELTKS 265
[Close]
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A7S0BYP4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BYP4_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.390e-13
Identity = 59/180 (32.78%), Postives = 93/180 (51.67%), Query Frame = 3 
Query:    3 LATAFSDMGETDSALEAVQTGLKTDPKNGDLLRLRRSLKAKHSATVSAAQKGGAGSKSVGSQRGGGTIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGVKE--ATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEI 536
            LATA  ++ + D A   ++ GL  DP N  L +  R +  K      A  K    + +  + R  G +D    QE  +L  Q  +T RE   V A +    RE +   LT  EL+ + +  ++KMY+S+GKMFLL  +E I + L +  K++ K E  L+ K  YLE+R+ S++ N+ E+
Sbjct:   87 LATAQIELNDLDGAHSTIKQGLNVDPSNNQLSKQLRIVNGKKKEIAKAIAKKAKSAGNNAAPRSVGNVDSSVSQELMDLQEQYISTNREYNTVTAHITKAQREQRTNELTKSELEKLPQESSSKMYRSIGKMFLLSGREAIMDHLGTAMKDEAKKEVDLKQKLDYLERRIKSQRQNIQEL 266
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BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A7S2CYH7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CYH7_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 5.030e-12
Identity = 55/186 (29.57%), Postives = 95/186 (51.08%), Query Frame = 3 
Query:    3 LATAFSDMGETDSALEAVQTGLKTDPKNGDLLRLRRSLKAKHSATVSAAQKGGAGSKSVGSQRGGGTIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEIIKNIQAQA 560
            LA A  ++G  D A+  ++ GLK DP + DL RL + +K                                    +Q+       T+REL EV+ +L +  RE K   LT  +++ V E  KMY+SVGKMF+L  K ++  IL  + + + KT+ +L +++ YL++R+TS++ N+ ++++N   +A
Sbjct:   82 LAVAQLELGSPDEAVSTIRDGLKQDPGHKDLARLLQKMKXXXXXXXXXXX--------XXXXXXXXXXXXXXXXSYQQ-------TERELQEVQGRLMSSQREQKMISLTSKQIENVPETNKMYRSVGKMFMLTPKADMEGILQEQGQTEKKTQTELMSRRKYLQRRITSQEENIKDLMQNAMERA 252
[Close]
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: UPI00193AC0C8 (prefoldin subunit 1-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193AC0C8)

HSP 1 Score: 68.2 bits (165), Expect = 2.550e-10
Identity = 39/112 (34.82%), Postives = 69/112 (61.61%), Query Frame = 3 
Query:  204 IDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEII 539
            +D +  Q F +L  ++  T+ ++   +AQ+  + RE KR  LT  E+ G+   T+++QSVG+MFLL+T++EI   L S ++  +    +L+AK+ YLEK +   + NL E++
Sbjct:    1 MDMELKQAFADLQRKMVETQSQMKIADAQIMQLGREKKRSELTASEISGLPSETRLFQSVGRMFLLRTRDEIDQNLKSSQENSDTKVKELEAKKKYLEKTVKESEENLREMV 112
[Close]
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A8B6GLG4_MYTGA (Prefoldin subunit 1 n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GLG4_MYTGA)

HSP 1 Score: 68.2 bits (165), Expect = 3.280e-10
Identity = 40/121 (33.06%), Postives = 70/121 (57.85%), Query Frame = 3 
Query:  189 RGGGTIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEIIKNIQ 551
            + G  +D +  + FQEL +++  +K ++   +AQ++ + R ++   L   EL  + E T++Y+ VG+MF+LQ  +EI N LDSK K   +    LQ  + YLE+ +   + NL E+I + Q
Sbjct:    4 KAGMPVDMELKKAFQELQIKMINSKNQIKISDAQIEALKRTIQHSKLVYHELSSLAEETRLYEGVGRMFILQPPKEIKNQLDSKMKASEEKIESLQKNKTYLERNIKESEDNLREMITSRQ 124
[Close]
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A7S2LG90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LG90_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 7.570e-10
Identity = 57/183 (31.15%), Postives = 96/183 (52.46%), Query Frame = 3 
Query:    3 LATAFSDMGETDSALEAVQTGLKTDPKNGDLLRLRRSLKAKHSATVSAAQKGGAGSKSVGSQRGGGTIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELD----GVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEII 539
            L  A  +  + D AL  V+ GL+ D +N  LL+  R +  +      AA++  A S +  +   G   +++   E +EL  Q   T REL  + + +Q   RE K   +T GE++    G  +   +Y+ VGKMF+L ++ E+ + L     +  K E+ L  K++YL+KR++S+Q NL E+I
Sbjct:   87 LIQALIEQKDWDGALGTVRQGLQLDGENSQLLKQLRIITQQKKKMDVAAKQATAMSDARSANIAGS--NKEESDEIRELQEQYVATNRELQIINSNIQKSQREQKLADITLGEINKMTSGDDDGRNLYRGVGKMFMLSSRPEVLDHLKKSTADAKKDESDLIQKRVYLQKRISSQQQNLQELI 267
[Close]
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A1L8GXE1_XENLA (prefoldin subunit 1 n=3 Tax=Xenopus TaxID=8353 RepID=A0A1L8GXE1_XENLA)

HSP 1 Score: 66.6 bits (161), Expect = 1.000e-9
Identity = 39/118 (33.05%), Postives = 74/118 (62.71%), Query Frame = 3 
Query:  204 IDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEIIKNIQAQ 557
            +D +  + F EL  +V  T++++   + Q++ + R  K  +LTG E+  + ++T MY+ VG+MF+LQTK+ I N L +K+K  ++  A+L+ K+ YLE+ +   + N+ E++   +AQ
Sbjct:    5 VDLELKKAFTELQAKVLDTQQKVKLADLQIEQLNRTKKHAYLTGAEIKTLSDSTPMYEGVGRMFVLQTKDTIHNQLLNKQKVADEKIAELEQKKTYLERSVKDAEDNIREMLMARRAQ 122
[Close]
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A7S3V4Z5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4Z5_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.150e-9
Identity = 55/181 (30.39%), Postives = 95/181 (52.49%), Query Frame = 3 
Query:    3 LATAFSDMGETDSALEAVQTGLKTDPKNGDLLRLRRSLKAKHS-ATVSAAQKGGAGSKSVGSQRGGGTIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGV--KEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEI 536
            LATA     + + A   ++ G+  DP N  L +L R +K+K +   + A                    D    +E  +L  Q+ T+ +++  V+A + T  + LK   +T GEL+G+  +E  KMY+ +GKMF++Q+++EI + L  + K+  K    L+ K+ YLEKR+ S+Q N+ E+
Sbjct:   78 LATAQIAKHDYNGATTTIKQGMNVDPDNKQLGKLMRIVKSKKADEKLKAXXXXXXXXXXXXXXXXXXXXDSSLSKEIMDLKEQLRTSAKDMNIVQASVMTAEKSLKVNKITIGELEGIPMEEERKMYRGIGKMFMMQSRDEIFDHLKGEMKDDEKKLEGLKHKKEYLEKRIKSQQQNIIEL 258
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4N5_9STRA7.600e-3143.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SWL7_9STRA3.910e-2035.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V2AJX7_9STRA2.070e-1434.21Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S0BYP4_9STRA1.390e-1332.78Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2CYH7_9STRA5.030e-1229.57Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI00193AC0C82.550e-1034.82prefoldin subunit 1-like n=1 Tax=Styela clava TaxI... [more]
A0A8B6GLG4_MYTGA3.280e-1033.06Prefoldin subunit 1 n=1 Tax=Mytilus galloprovincia... [more]
A0A7S2LG90_9STRA7.570e-1031.15Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A1L8GXE1_XENLA1.000e-933.05prefoldin subunit 1 n=3 Tax=Xenopus TaxID=8353 Rep... [more]
A0A7S3V4Z5_9STRA3.150e-930.39Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51360contigH-elongata_contig51360:440..3703 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score72.0
Seed ortholog evalue3.2e-10
Seed eggNOG ortholog159749.K0SFX9
EggNOG free text desc.positive regulation of catalytic activity in other organism involved in symbiotic interaction
EggNOG OGsCOG0457@1,KOG0548@2759
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-15_003030.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size1576
Cds size540
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930840.4510212-UTR-H-elongata_contig51360:439..4621622930840.4510212-UTR-H-elongata_contig51360:439..462Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51360 440..462 +
1691679592.8282886-UTR-H-elongata_contig51360:439..4621691679592.8282886-UTR-H-elongata_contig51360:439..462Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51360 440..462 +
1622930840.540954-UTR-H-elongata_contig51360:2343..23801622930840.540954-UTR-H-elongata_contig51360:2343..2380Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51360 2344..2380 +
1691679592.9109187-UTR-H-elongata_contig51360:2343..23801691679592.9109187-UTR-H-elongata_contig51360:2343..2380Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51360 2344..2380 +
1622930840.5547533-UTR-H-elongata_contig51360:2695..33971622930840.5547533-UTR-H-elongata_contig51360:2695..3397Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51360 2696..3397 +
1691679592.9230645-UTR-H-elongata_contig51360:2695..33971691679592.9230645-UTR-H-elongata_contig51360:2695..3397Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51360 2696..3397 +
1622930840.569523-UTR-H-elongata_contig51360:3429..37031622930840.569523-UTR-H-elongata_contig51360:3429..3703Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51360 3430..3703 +
1691679592.9325063-UTR-H-elongata_contig51360:3429..37031691679592.9325063-UTR-H-elongata_contig51360:3429..3703Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51360 3430..3703 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930840.466237-CDS-H-elongata_contig51360:462..5201622930840.466237-CDS-H-elongata_contig51360:462..520Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51360 463..520 +
1691679592.8445976-CDS-H-elongata_contig51360:462..5201691679592.8445976-CDS-H-elongata_contig51360:462..520Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51360 463..520 +
1622930840.4802003-CDS-H-elongata_contig51360:1005..11511622930840.4802003-CDS-H-elongata_contig51360:1005..1151Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51360 1006..1151 +
1691679592.8559842-CDS-H-elongata_contig51360:1005..11511691679592.8559842-CDS-H-elongata_contig51360:1005..1151Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51360 1006..1151 +
1622930840.492862-CDS-H-elongata_contig51360:1365..15221622930840.492862-CDS-H-elongata_contig51360:1365..1522Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51360 1366..1522 +
1691679592.8668282-CDS-H-elongata_contig51360:1365..15221691679592.8668282-CDS-H-elongata_contig51360:1365..1522Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51360 1366..1522 +
1622930840.5100641-CDS-H-elongata_contig51360:1920..20121622930840.5100641-CDS-H-elongata_contig51360:1920..2012Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51360 1921..2012 +
1691679592.8847532-CDS-H-elongata_contig51360:1920..20121691679592.8847532-CDS-H-elongata_contig51360:1920..2012Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51360 1921..2012 +
1622930840.5245123-CDS-H-elongata_contig51360:2256..23431622930840.5245123-CDS-H-elongata_contig51360:2256..2343Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51360 2257..2343 +
1691679592.8968458-CDS-H-elongata_contig51360:2256..23431691679592.8968458-CDS-H-elongata_contig51360:2256..2343Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51360 2257..2343 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51360.12395.1prot_H-elongata_contig51360.12395.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig51360 463..2343 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig51360.12395.1

>prot_H-elongata_contig51360.12395.1 ID=prot_H-elongata_contig51360.12395.1|Name=mRNA_H-elongata_contig51360.12395.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
MGETDSALEAVQTGLKTDPKNGDLLRLRRSLKAKHSATVSAAQKGGAGSK
SVGSQRGGGTIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRG
HLTGGELDGVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQL
QAKQLYLEKRLTSEQGNLDEIIKNIQAQA*
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mRNA from alignment at H-elongata_contig51360:440..3703+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig51360.12395.1 ID=mRNA_H-elongata_contig51360.12395.1|Name=mRNA_H-elongata_contig51360.12395.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3264bp|location=Sequence derived from alignment at H-elongata_contig51360:440..3703+ (Himanthalia elongata Himel1 dioecious)
GATTGGCGACAGCGTTTTCGGACATGGGAGAAACCGACTCGGCCTTGGAA
GCCGTACAGACGGGCCTTAAAACGGACCCAAGTGAGGGTACTTTAATCTC
GCCATGTGCCTCCTTGACACGCAAAACAATTATTCTGCTTTTTTAAAATT
TATTTATTTATTTGTGTTTGTTACCGATTATATTTTCCATCTGGCGACTC
GACCGCCAGAATCCTCCCATATCTTTGCTCCGCCGCCTTAAAAGAAATGA
ACGCCCTTGGAAACTGGCTCCCGTTCGATGAATGCTCGCTCGTAATCAAC
AGGTGGGGGCAAACGTTCGGTGTGTTGTGTCCTTTTCCCTTTAGCGCTCA
CTGACGTACCAGTCGACGACGAAATAACCGCCTGGGGGGGGAGCAATGTT
TGGGGATATGATGTGGTTAACGTGTGTGTGTTGGGTGGGGGGGGGGGAGA
GACTCTCGTGTAAGTTGCCATGTGCTGTATACGGTCCTAGACATCCCCTT
GGTTTTTTGGCCTGAATCATCCCTGGTCTTTTTTCGTCGCGTGCATTTGG
TGTCCCGCGTGGGAAGAGAACGGCGATCTGCTGCGTTTGAGGCGAAGTCT
AAAGGCTAAACACTCCGCGACCGTCTCGGCCGCACAAAAGGGTGGCGCAG
GATCCAAGAGCGTGGGCAGCCAGCGAGGCGGAGGGACGATCGACCGGCAA
ACCCTCCAGGAGGTGAACGTTCGTGGAAACCTCCAACTCCCGCCTTTTGT
CGCTTAGAGAAGGGGCGTTAAGGTAACCGCCCCCCGTCCCCATTCTTCCA
CGGGCGGGAGCGCGTGACTCGCTGCTCGTGAGTGTAGATGAATTCCCCTT
TTATGCGGAAGTCAGCCGCATCAACCGCCGTCGTATGATACCCCCACCTC
CCGCGCGATGAAATGCAACGACGCAGTTCCAGGAGCTTTCTGTGCAAGTT
GGGACGACGAAGCGGGAGCTCGCGGAGGTGGAGGCGCAGTTGCAGACCGT
TGTGCGCGAGTTGAAGCGGGGGCACTTGACGGGCGGAGAGCTGGACGGGG
TGAAGGAAGCGACGAAGATGTACCAAAGCGTAGGCGAGAGAAGTGCAGAG
GTTGGCTAGCGCCTTTCGTCTTGTTGATGTCTTTTCGGGGTGTGCTGCAA
GGTGCTATTTGGAGGGTCTCTAGTGTTTTGTCAATTTTCCCCATCGAGAG
TTGCTGTAAATCTTCGGGCGAAAAATGGCGTCTCGTGGGGAAAGCATGAT
GTCCGTACCTCGGTGAACGCGCCGGTAATAAACTACCACAATTCATCCGT
CACGCAGTTTAAAGTAGGGGGTAAGGTGCGGGCCACGCGGTAACCGGACG
CGTACAGATATGTAAAATAAGAATGTCACAATTTCATGTACGCATTCATA
CAACCTCAACCCCCTCGTAATTTATCTGACTTGCCTTTGCGCGCCCTCTC
TTCGCCCTCCCCTGCCTTCCTATCTCGGAAGGGAAAATGTTCCTGCTGCA
AACTAAGGAGGAGATCACCAACATTTTGGACAGCAAGCGGAAAGAGCAGA
ACAAGACTGAGGCGCAGCTGCAGGTGCGGGCGCGTAGACGAGAAAATACC
CAAATGCATGAAAGATTTAAAAGGGGTTTTGACGCTGAACGCCCCCATTT
CCTGACGTGAAGGAATTTGCAATGAGGTTACCTCGTCGCCTTGCTCTCTA
TCCCGTACTATGGAGCTGGTGGGCCGTGCGACAGGCGCCCTGCTAGCGAT
GGTTTAGATGCGTATGCTTGCCGTCACGTCCGAAGTATAAATTACCCCGT
TGGATTGCTTCGCGCAGGCGAAACAGTTGTACCTCGAGAAGCGATTGACT
TCCGAACAGGGCAATCTGGACGAAATCATCAAGAACATCCAAGCTCAGGC
ATGACGCGGCAGGCTAGACCCGCGAGGAAAATACGACTAAGGTGCGCACA
TCAGAATCGCGCTATCAGTGAGCGGCGTGGTTGGTCCTGTTTAGCGTCGA
CCCCACCAGATACACGATACCTCATGATGCCTCTAGTTGATCGGGGACTG
ATATAGAGCGGCACGATCCTCGCTGAGCGGATGAGGTCATCATCGTTTCA
CCGATTTCTTTACAACTTTTCAGCACACCTTTTCAGCGTAAATAAATGAA
AATGATCTCCCCGACGGAGAACCAAGTGGTGATGCGAATGCCTCGGGGAG
ACAAAACAAACGCGAAATGGGATGTTCGCGCCTATTTTGACGTTCGTTGG
TGGCAGGGGACGCGCGCAACAATGGGAGAGGTAGAGCACGGTGTCTTTCA
GGGTCGCGCGCAGATTTGGCGCCAATGGTCATGGTTGTGTCTCTCCAGGT
TGATCCGCGTCCTGCTCCTTGACGAGCGTTGATTTTGTGAGGCTCCTTGA
AAGCTAGCGATGGACAAAGGTTGTTTTGCTAACTTTTGGCCGTCGTGGAG
TCTTTACAGGATCTAAGCCGAGCGGCACACGGTTAGACCCATTCGTGGCG
GGGGCCGGGATAACACCGTGGCTGATGCGGCCGCCCGTGTGATCACACGA
GGGCAGTGGTTCGGGCTGCGTTCGGACAGCCCCCACGCGGGAATATTAGC
GGTGTTTTATTTTCATGATTTTTTCACCAAAGAGACAGATCCAAGGCTGC
ATCCCGAGGCTGTTGTTGCATCGCCTGGCCGTGCTTGGACGCGATGATGA
TCAAAGAGTCGACCATATGTCAGGGTTAAAGGTAGTAACTGTGAAAAGAG
AGCATGGCTGTTGGATAAAATGCGAAGGCCGAGATCAATGCAGCGTTGAC
ATGTTTTACATGGCAGCGCGGGTGATGTGAGGCTACGTAGTAGAGGTTTG
AGATTAGGGACCCGAAATAAACTGACTCATGCGAGAGTGGTTCGAGAAGA
GTGGACCAAACAAGAGTGCATTAGATGGGGCATCTCGTCTGTGCGCTAGA
GGGTAATAACCCCGGTATCCCCGCGAAGGCATCCAAGAGGTTACAACGTT
AACCTACCTCTGCATTCTATTGGTCGCACTGAGTAATCTATCCACATCTA
GAAGTCTAGGTTTCTCAGCCCTCCAGACGAGTGATGGGGTTGATGCTCAG
TGACTACCCTCTCTGTTTACTACTTTTAGAGCAATGCGACCCTCCAGATT
TGTACGTATGCCCAGGATATCTCTGCGATCGTCCTTCCATACTCACCACA
GCCTCTCTAAGCTGTAGTTTAGTTTGATGTATAGGGCTATGACAGACCCC
ATAAGTTGTACCGG
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Coding sequence (CDS) from alignment at H-elongata_contig51360:440..3703+

>mRNA_H-elongata_contig51360.12395.1 ID=mRNA_H-elongata_contig51360.12395.1|Name=mRNA_H-elongata_contig51360.12395.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1080bp|location=Sequence derived from alignment at H-elongata_contig51360:440..3703+ (Himanthalia elongata Himel1 dioecious)
ATGGGAGAAACCGACTCGGCCTTGGAAGCCGTACAGACGGGCCTTAAAAC
GGACCCAAATGGGAGAAACCGACTCGGCCTTGGAAGCCGTACAGACGGGC
CTTAAAACGGACCCAAAGAACGGCGATCTGCTGCGTTTGAGGCGAAGTCT
AAAGGCTAAACACTCCGCGACCGTCTCGGCCGCACAAAAGGGTGGCGCAG
GATCCAAGAGCGTGGGCAGCCAGCGAGGCGGAGGGACGATCGACCGGCAA
ACCCTCCAGGAGAGAACGGCGATCTGCTGCGTTTGAGGCGAAGTCTAAAG
GCTAAACACTCCGCGACCGTCTCGGCCGCACAAAAGGGTGGCGCAGGATC
CAAGAGCGTGGGCAGCCAGCGAGGCGGAGGGACGATCGACCGGCAAACCC
TCCAGGAGTTCCAGGAGCTTTCTGTGCAAGTTGGGACGACGAAGCGGGAG
CTCGCGGAGGTGGAGGCGCAGTTGCAGACCGTTGTGCGCGAGTTGAAGCG
GGGGCACTTGACGGGCGGAGAGCTGGACGGGGTGAAGGAAGCGACGAAGA
TGTACCAAAGCGTAGTTCCAGGAGCTTTCTGTGCAAGTTGGGACGACGAA
GCGGGAGCTCGCGGAGGTGGAGGCGCAGTTGCAGACCGTTGTGCGCGAGT
TGAAGCGGGGGCACTTGACGGGCGGAGAGCTGGACGGGGTGAAGGAAGCG
ACGAAGATGTACCAAAGCGTAGGGAAAATGTTCCTGCTGCAAACTAAGGA
GGAGATCACCAACATTTTGGACAGCAAGCGGAAAGAGCAGAACAAGACTG
AGGCGCAGCTGCAGGGAAAATGTTCCTGCTGCAAACTAAGGAGGAGATCA
CCAACATTTTGGACAGCAAGCGGAAAGAGCAGAACAAGACTGAGGCGCAG
CTGCAGGCGAAACAGTTGTACCTCGAGAAGCGATTGACTTCCGAACAGGG
CAATCTGGACGAAATCATCAAGAACATCCAAGCTCAGGCATGAGCGAAAC
AGTTGTACCTCGAGAAGCGATTGACTTCCGAACAGGGCAATCTGGACGAA
ATCATCAAGAACATCCAAGCTCAGGCATGA
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