mRNA_H-elongata_contig51295.12387.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig51295.12387.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 8.240e-19 Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 1
Query: 82 IYADPLDWWRLNAVKFPLLAALTRRLLTIPASQAQSERVFSSAGQIVTQRRNRLSPENVELLIAL 276
+Y DPLDWWR+ FP LA L RR+L IPA+QA+SER+FS AG IVT+ RN L+P VELL+ L
Sbjct: 219 VYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 283
BLAST of mRNA_H-elongata_contig51295.12387.1 vs. uniprot
Match: A0A151I7P1_9HYME (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Cyphomyrmex costatus TaxID=456900 RepID=A0A151I7P1_9HYME) HSP 1 Score: 77.0 bits (188), Expect = 1.230e-16 Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 34 ISTYIDIGIYPSISKIIYADPLDWWRLNAVKFPLLAALTRRLLTIPASQAQSERVFSSAGQIVTQRRNRLSPENVELLIAL 276
I Y + P + II DWW+ N +FP+LAA+ R+ L IPA+Q SER+FS AG IVT R++L PENVE L L
Sbjct: 2 IKVYCAENVVPKTTDII-----DWWKCNVTRFPILAAVARQYLAIPATQVSSERLFSDAGNIVTATRSKLIPENVEKLCFL 77
BLAST of mRNA_H-elongata_contig51295.12387.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 3.250e-16 Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 1
Query: 76 KIIYADPLDWWRLNAVKFPLLAALTRRLLTIPASQAQSERVFSSAGQIVTQRRNRLSPENVELLIAL 276
K ++ +PLD WR +++PLLAAL RR+L IP+SQAQSERVFS+AG VT R+RL ENVELL+ L
Sbjct: 477 KKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYL 543
BLAST of mRNA_H-elongata_contig51295.12387.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 4.590e-16 Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 1
Query: 82 IYADPLDWWRLNAVKFPLLAALTRRLLTIPASQAQSERVFSSAGQIVTQRRNRLSPENVELLIAL 276
+ PL+WWR+ A ++P LA+L RR+L IPA QAQSERVFSSAG +VT+ R R+ PENV L++ L
Sbjct: 476 VRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFL 540
BLAST of mRNA_H-elongata_contig51295.12387.1 vs. uniprot
Match: A0A1X7TGY6_AMPQE (BED-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TGY6_AMPQE) HSP 1 Score: 80.5 bits (197), Expect = 1.140e-15 Identity = 34/62 (54.84%), Postives = 48/62 (77.42%), Query Frame = 1
Query: 91 DPLDWWRLNAVKFPLLAALTRRLLTIPASQAQSERVFSSAGQIVTQRRNRLSPENVELLIAL 276
DPL+WW+ N+ +FPLL L RR L IP S SER+FS AG +V++RRNR+SP+NV++++ L
Sbjct: 540 DPLEWWKENSCRFPLLKVLARRYLCIPGSSVPSERLFSQAGVLVSERRNRISPKNVDIILFL 601
BLAST of mRNA_H-elongata_contig51295.12387.1 vs. uniprot
Match: UPI000EAB1B8F (zinc finger BED domain-containing protein 1-like n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI000EAB1B8F) HSP 1 Score: 76.6 bits (187), Expect = 1.470e-15 Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 1
Query: 97 LDWWRLNAVKFPLLAALTRRLLTIPASQAQSERVFSSAGQIVTQRRNRLSPENVELL 267
+ WW+ N V+FPLLAA+ R LL IPA+Q SER+FS+AG IV ++R+RL ENVE+L
Sbjct: 104 ISWWKANIVRFPLLAAVARNLLAIPATQVTSERLFSTAGNIVNEKRSRLCSENVEML 160
BLAST of mRNA_H-elongata_contig51295.12387.1 vs. uniprot
Match: A0A1A8HG22_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius korthausae TaxID=1143690 RepID=A0A1A8HG22_9TELE) HSP 1 Score: 74.3 bits (181), Expect = 1.620e-15 Identity = 34/82 (41.46%), Postives = 55/82 (67.07%), Query Frame = 1
Query: 19 AKHPHISTYIDIGIYPSISKI-IYADPLDWWRLNAVKFPLLAALTRRLLTIPASQAQSERVFSSAGQIVTQRRNRLSPENVE 261
+K P++ ++ Y S + + DPL+WWR++ V FPLLA L++R L IP + +ERVFS+AG +VT +R+ L P++V+
Sbjct: 6 SKTPYVRAEEEMDKYLKASSLPLSEDPLNWWRVHEVTFPLLARLSKRYLCIPGTSVSAERVFSTAGDVVTAKRSTLKPQHVD 87
BLAST of mRNA_H-elongata_contig51295.12387.1 vs. uniprot
Match: UPI001963A909 (zinc finger BED domain-containing protein 4-like n=2 Tax=Polypterus senegalus TaxID=55291 RepID=UPI001963A909) HSP 1 Score: 75.9 bits (185), Expect = 1.660e-15 Identity = 35/61 (57.38%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 94 PLDWWRLNAVKFPLLAALTRRLLTIPASQAQSERVFSSAGQIVTQRRNRLSPENVELLIAL 276
PL WWR N+ K+PLL+ L + L+IPA+ SERVFS+AG IVT +R++L PENV++LI L
Sbjct: 76 PLTWWRENSSKYPLLSPLVKEYLSIPATSVPSERVFSTAGDIVTAQRSQLLPENVDMLIFL 136
BLAST of mRNA_H-elongata_contig51295.12387.1 vs. uniprot
Match: UPI001113C14C (zinc finger BED domain-containing protein 1-like n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=UPI001113C14C) HSP 1 Score: 75.1 bits (183), Expect = 1.800e-15 Identity = 31/62 (50.00%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 91 DPLDWWRLNAVKFPLLAALTRRLLTIPASQAQSERVFSSAGQIVTQRRNRLSPENVELLIAL 276
DP +WW+ + K+PL+A L ++ L+IPA+ SER FS+AG +VT +RN L+PENV +L+ L
Sbjct: 53 DPFEWWKSHEKKYPLIAELVKKYLSIPATSVSSERCFSTAGNVVTSKRNCLAPENVNMLVFL 114
BLAST of mRNA_H-elongata_contig51295.12387.1 vs. uniprot
Match: E2BS40_HARSA (Zinc finger BED domain-containing protein 1 (Fragment) n=2 Tax=Harpegnathos saltator TaxID=610380 RepID=E2BS40_HARSA) HSP 1 Score: 73.6 bits (179), Expect = 2.150e-15 Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 91 DPLDWWRLNAVKFPLLAALTRRLLTIPASQAQSERVFSSAGQIVTQRRNRLSPENVELLIAL 276
DPL WW+ + +P++AALT+ L I AS A SERVFS+AG IVT +RN LS ENV LLI L
Sbjct: 1 DPLKWWKAHENLYPMIAALTKVYLAILASSASSERVFSTAGNIVTAKRNCLSTENVNLLIFL 62 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51295.12387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig51295.12387.1 >prot_H-elongata_contig51295.12387.1 ID=prot_H-elongata_contig51295.12387.1|Name=mRNA_H-elongata_contig51295.12387.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp TTPRTVAKHPHISTYIDIGIYPSISKIIYADPLDWWRLNAVKFPLLAALTback to top mRNA from alignment at H-elongata_contig51295:3342..3620+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig51295.12387.1 ID=mRNA_H-elongata_contig51295.12387.1|Name=mRNA_H-elongata_contig51295.12387.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=279bp|location=Sequence derived from alignment at H-elongata_contig51295:3342..3620+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig51295:3342..3620+ >mRNA_H-elongata_contig51295.12387.1 ID=mRNA_H-elongata_contig51295.12387.1|Name=mRNA_H-elongata_contig51295.12387.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=558bp|location=Sequence derived from alignment at H-elongata_contig51295:3342..3620+ (Himanthalia elongata Himel1 dioecious)back to top |