mRNA_H-elongata_contig51150.12374.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig51150.12374.1 vs. uniprot
Match: D8LB50_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB50_ECTSI) HSP 1 Score: 162 bits (411), Expect = 4.670e-43 Identity = 124/318 (38.99%), Postives = 168/318 (52.83%), Query Frame = 1
Query: 1 VIRSITANQGHFVCFHLLLTLALVSHAVVTATDPGFYHADVSLMSHGQSRRHIRWCDRCDAPKPPRAHHXXXXXXXXXXXXXXXXYVANCVGAGNQKQFLLLLLYSAASAAYANFLYFCVIGTSRWDATLAEARGLLLLFSWVVVILAVHLYGLLVDAGTVDRMQASSTKGREVELKTTYEASAWHGDERSKWTAIMTKDKAQSPPVLF-----SNTLPTLSADDTNMGIADISSG-KSPSWSSAG---------RGNNGARCGCSLGGNLSR--------WGAFRQEVFGDGPWWMWFVPSPAKLSSEVRDRVYSLH 885
V++ + A HFVCFH+LL LAL+SH T TDPGF+ L+ Q R RWC C+A KPPRAHH XXXXXXXXXXXXXX GAGN KQ LL L+YSAA A +A FL FC + + A L +FSW+V +++ ++G+ V AGTVDRMQA++ R A+ + W ++ + + PP P L D T+ +++ G + P+ +S+G R GA G + G L W QE+ G+G W +WFVP+PA+LS E+ RVY+ H
Sbjct: 153 VVKVVHAYGWHFVCFHVLLCLALLSHVAATVTDPGFFSRGSHLLGRAQERGSGRWCSHCEAYKPPRAHHCRXXXXXXXXXXXXXXXXXXXXGAGNHKQMLLFLVYSAACAVHAAFL-FCRLCNAFLMAVLLVG-----IFSWLVCLISSQVHGIRVHAGTVDRMQAAAPGYRAAGQAGALGAAPPDSRRQDGWPGLL-PTRRECPPGHLPLPGDGRVTPVLDEDATSSTGQELTQGARRPASASSGGFEVAVSLPRATPGAVAGDAASGGLGLRFRVIRGLWETVHQEILGEGAWVLWFVPTPARLSPELEQRVYAPH 463
BLAST of mRNA_H-elongata_contig51150.12374.1 vs. uniprot
Match: A0A835YVM4_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM4_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 6.810e-10 Identity = 58/184 (31.52%), Postives = 76/184 (41.30%), Query Frame = 1
Query: 16 TANQGHFVCFHLLLTLALVSHAVVTATDPGFYHADVSLMS---------HGQSRRHIRWCDRCDAPKPPRAHHXXXXXXXXXXXXXXXXYVANCVGAGNQKQFLLLLLYSAASAAY-----ANFLYFCVIG----------TSRWDATLAEARGLLLLFSWVVVILAVHLYGLLVDAGTVDRMQ 495
T + H F L L+L H V TDPG + +S G + C RCD KPPRAHH +V NC+GA NQK F+L L Y+ + Y A + Y C G TS + TL LLF+ V +LA + ++ GTVDR+Q
Sbjct: 86 TYSWPHVAAFCALCALSLWCHLKVMTTDPGAVPHNARPVSAAAAEGRCEEGAEEAAVTMCARCDGFKPPRAHHCRVCRRCIARMDHHCPWVNNCIGALNQKAFILFLAYTLLLSVYGLGLGAAYFYACESGDESCLEHTPTTSTFAPTLLVLSFGALLFT--VTMLANQTHSVVKGVGTVDRVQ 267
BLAST of mRNA_H-elongata_contig51150.12374.1 vs. uniprot
Match: UPI00129D49F1 (palmitoyltransferase ZDHHC3-like isoform X2 n=1 Tax=Phasianus colchicus TaxID=9054 RepID=UPI00129D49F1) HSP 1 Score: 67.4 bits (163), Expect = 2.160e-9 Identity = 43/126 (34.13%), Postives = 57/126 (45.24%), Query Frame = 1
Query: 31 HFVCFHLLLTLALVSHAVVTATDPGFYHADVSLMS----HGQSRRHIRW--CDRCDAPKPPRAHHXXXXXXXXXXXXXXXXYVANCVGAGNQKQFLLLLLYSAASAAYANFLYFCV-IGTSRWDAT 387
H V F+LL+ L L SH DPG + + H R W C RC+A +PPRAHH ++ NC+G NQK F+ L Y+ ++AYA L V +G S D T
Sbjct: 54 HAVTFNLLVLLLLASHTRAVFADPGVVPLPGTAIDFSDLHPTERNSDEWTLCSRCEAYRPPRAHHCRVCHRCVRRMDHHCPWINNCIGELNQKYFIQFLFYTGLTSAYAAGLVLAVWLGPSGGDGT 179
BLAST of mRNA_H-elongata_contig51150.12374.1 vs. uniprot
Match: A0A5J5AY89_9ASTE (S-acyltransferase n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5AY89_9ASTE) HSP 1 Score: 65.1 bits (157), Expect = 1.600e-8 Identity = 38/131 (29.01%), Postives = 60/131 (45.80%), Query Frame = 1
Query: 16 TANQGHFVCFHLLLTLALVSHAVVTATDPG---------FYHADVSLMSHGQSRRHIRWCDRCDAPKPPRAHHXXXXXXXXXXXXXXXXYVANCVGAGNQKQFLLLLLYSAASAAYANFLYFCVIGTSRWD 381
+A + + F L +L + S V +DPG +VS ++ +R CD+C A KPPRAHH ++ NCVG GN K F++L+LY+ ++ Y++ + C WD
Sbjct: 39 SAGSLNGLIFTSLASLCIFSFFVCVLSDPGGVPTTYVPDIEDTEVSDQEPKKTGASLRRCDKCSAYKPPRAHHCRVCRRCVLRMDHHCLWINNCVGHGNYKAFVVLVLYATIASIYSSVIIVCCSIQKDWD 169
BLAST of mRNA_H-elongata_contig51150.12374.1 vs. uniprot
Match: A0A8C4WW27_EPTBU (Palmitoyltransferase n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4WW27_EPTBU) HSP 1 Score: 63.5 bits (153), Expect = 5.410e-8 Identity = 38/124 (30.65%), Postives = 57/124 (45.97%), Query Frame = 1
Query: 31 HFVCFHLLLTLALVSHAVVTATDPGFY--------HADVSLMSHGQSRR-HIRW--CDRCDAPKPPRAHHXXXXXXXXXXXXXXXXYVANCVGAGNQKQFLLLLLYSAASAAYANFLYFCVIGT 369
H F+ L+ + +++H DPGF +D+ Q+ + H W C+RC+A +PPRAHH ++ NCVG NQ+ F+ L YSA Y+ L V+GT
Sbjct: 46 HTAAFNALVLMLIIAHVRAATADPGFVPLPYTAIDFSDIRSSPRNQAEKSHEEWTVCNRCEAYRPPRAHHCRVCGRCVRKMDHHCPWINNCVGELNQRHFIQFLFYSALCCVYSATL---VVGT 166
BLAST of mRNA_H-elongata_contig51150.12374.1 vs. uniprot
Match: A0A7S1M6E7_ALECA (Palmitoyltransferase n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1M6E7_ALECA) HSP 1 Score: 63.2 bits (152), Expect = 7.990e-8 Identity = 39/99 (39.39%), Postives = 46/99 (46.46%), Query Frame = 1
Query: 28 GHFVC---FHLLLTLALVSHAVVTATDPGFYHADVSLMSHGQSRRHIRWCDRCDAPKPPRAHHXXXXXXXXXXXXXXXXYVANCVGAGNQKQFLLLLLY 315
G VC + L L + SH TDPG D M G ++ C +C APKPPRAHH +V NCVGA NQK F+L LLY
Sbjct: 58 GRRVCLAVYELWFVLCIWSHLTCMLTDPGSVPLDTE-MEEG-----MKQCPKCKAPKPPRAHHCSICRRCIMKMDHHCPWVNNCVGARNQKHFVLFLLY 150
BLAST of mRNA_H-elongata_contig51150.12374.1 vs. uniprot
Match: UPI001CF1AC84 (palmitoyltransferase ZDHHC3-like isoform X1 n=3 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF1AC84) HSP 1 Score: 62.8 bits (151), Expect = 9.170e-8 Identity = 45/172 (26.16%), Postives = 82/172 (47.67%), Query Frame = 1
Query: 31 HFVCFHLLLTLALVSHAVVTATDPGFY--------HADVSLMSHGQSRRHIRW--CDRCDAPKPPRAHHXXXXXXXXXXXXXXXXYVANCVGAGNQKQFLLLLLYSAASAAYANFLYFCVIGTS-RWD-----ATLAEARGLLLLFSWVVVILAVHLYGLLVDAGTVDRMQA 498
H F++++ L +SHA + +DPG ++++ Q++ W C +C+A +PPRAHH ++ NCVG NQK F+L L Y+ ++ Y C+I T+ W T+ A+ ++++ +++++ L+GL V A D+ A
Sbjct: 46 HVCIFNVIVLLLAISHARASFSDPGVVARPSTSLDFSEINKAKTKQTQDENEWTICAKCEAYRPPRAHHCRTCGRCVRKMDHHCPWINNCVGEANQKYFVLFLFYTGLASLY------CIILTAVSWTLNCQGCTIEYAKKTRIIYT-IILMIEGCLFGLFVLAMLCDQFSA 210
BLAST of mRNA_H-elongata_contig51150.12374.1 vs. uniprot
Match: A0A7S3S0N1_EMIHU (Palmitoyltransferase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S0N1_EMIHU) HSP 1 Score: 62.4 bits (150), Expect = 1.310e-7 Identity = 56/120 (46.67%), Postives = 69/120 (57.50%), Query Frame = 1
Query: 43 FHLLLTLALVSHAVVTATDPGFYHADVSLMSHGQSRRHIRWCDRCDAPKPPRAHHXXXXXXXXXXXXXXXXYVANCVGAGNQKQFLLLLLYSAASAAYANFLYFCVIGTSRWDATLAEAR 402
F L+ LA+ SH TDPG + + + + + C RC+ KPPRAHH XXXXXXXXXXXXXXX NCVGA NQK F+L + Y+A + YA V+ R ATL E R
Sbjct: 55 FLLISALAVASHLRTMLTDPGAVPHEYTPSALLHDEKALPMCSRCNGFKPPRAHHCXXXXXXXXXXXXXXXXXXNCVGANNQKHFVLFVGYTALLSGYA-----MVLLVLRLMATLNEPR 169
BLAST of mRNA_H-elongata_contig51150.12374.1 vs. uniprot
Match: A0A7K7NQ94_HALAL (Palmitoyltransferase (Fragment) n=2 Tax=Accipitrinae TaxID=8955 RepID=A0A7K7NQ94_HALAL) HSP 1 Score: 61.2 bits (147), Expect = 1.850e-7 Identity = 37/111 (33.33%), Postives = 51/111 (45.95%), Query Frame = 1
Query: 31 HFVCFHLLLTLALVSHAVVTATDPGFY--------HADVSLMSHGQSRRHIRWCDRCDAPKPPRAHHXXXXXXXXXXXXXXXXYVANCVGAGNQKQFLLLLLYSAASAAYA 339
H F+L++ L L HA DPG +D+ S QS+ CDRC+A +PPRAHH ++ NCVG NQK F+ L Y+ ++ YA
Sbjct: 53 HAAAFNLIVLLLLACHARAVLADPGVVPLPDTAIDFSDLRTPSQ-QSQEDWTVCDRCEAYRPPRAHHCRICHRCVRRMDHHCPWINNCVGELNQKYFIQFLFYAGVASLYA 162
BLAST of mRNA_H-elongata_contig51150.12374.1 vs. uniprot
Match: A0A6T0FHE1_EMIHU (Palmitoyltransferase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6T0FHE1_EMIHU) HSP 1 Score: 60.5 bits (145), Expect = 1.960e-7 Identity = 50/102 (49.02%), Postives = 62/102 (60.78%), Query Frame = 1
Query: 43 FHLLLTLALVSHAVVTATDPGFYHADVSLMSHGQSRRHIRWCDRCDAPKPPRAHHXXXXXXXXXXXXXXXXYVANCVGAGNQKQFLLLLLYSAASAAYANFL 348
F L+ LA+ SH TDPG + + + + + C RC+ KPPRAHH XXXXXXXXXXXXXXX NCVGA NQK F+L + Y+A + YA L
Sbjct: 55 FLLISALAVASHLRTMLTDPGAVPHEYTPSALLHDEKALPMCSRCNGFKPPRAHHCXXXXXXXXXXXXXXXXXXNCVGANNQKHFVLFVGYTALLSGYAMVL 156 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51150.12374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig51150.12374.1 >prot_H-elongata_contig51150.12374.1 ID=prot_H-elongata_contig51150.12374.1|Name=mRNA_H-elongata_contig51150.12374.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=296bp VIRSITANQGHFVCFHLLLTLALVSHAVVTATDPGFYHADVSLMSHGQSRback to top mRNA from alignment at H-elongata_contig51150:392..2978- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig51150.12374.1 ID=mRNA_H-elongata_contig51150.12374.1|Name=mRNA_H-elongata_contig51150.12374.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2587bp|location=Sequence derived from alignment at H-elongata_contig51150:392..2978- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig51150:392..2978- >mRNA_H-elongata_contig51150.12374.1 ID=mRNA_H-elongata_contig51150.12374.1|Name=mRNA_H-elongata_contig51150.12374.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1776bp|location=Sequence derived from alignment at H-elongata_contig51150:392..2978- (Himanthalia elongata Himel1 dioecious)back to top |