mRNA_H-elongata_contig50972.12355.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig50972.12355.1
Unique NamemRNA_H-elongata_contig50972.12355.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: A0A6G7NUH2_SACJA (Nuf2p n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G7NUH2_SACJA)

HSP 1 Score: 203 bits (516), Expect = 1.230e-59
Identity = 144/227 (63.44%), Postives = 175/227 (77.09%), Query Frame = 1
Query:    1 QEHVAQVSMIFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKEHMYREAMAKKRAVREKAKAAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAALKQAEVEKGRLQGQVVTSPQRILREVADQQQALDQ 681
            ++H +QV M+FEKLV+T  GVTKE+MSQPAFA L  LS P++H++NI F+ALFR VCKMMKIS+IDDF+LKDMS+P   RL RQLSA INFVRFRE K+ MY+E +A+K++V   +KA++LR+ ++ ++L+D+Q +M          XXXXXXXXXXXXXXXXXXXXXXXXXXX                AALKQAEVEK RLQGQVV SPQRILREVADQQQALDQ
Sbjct:   39 KQHASQVVMVFEKLVETTMGVTKEEMSQPAFAGLGCLSNPELHDDNITFLALFRNVCKMMKISKIDDFALKDMSDPTRPRLRRQLSAAINFVRFREEKDVMYQEWLARKKSVAAASKASKLRNIKLADDLDDVQSRMAEKKKAIEDIXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKANFAAKDKVASSMAALKQAEVEKERLQGQVVNSPQRILREVADQQQALDQ 265          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: D8LMS3_ECTSI (Centromere-associated protein NUF2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMS3_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 3.270e-47
Identity = 136/227 (59.91%), Postives = 169/227 (74.45%), Query Frame = 1
Query:    1 QEHVAQVSMIFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKEHMYREAMAKKRAVREKAKAAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAALKQAEVEKGRLQGQVVTSPQRILREVADQQQALDQ 681
            ++HV Q++M+FE+LV+T  GVTKE+MSQP FA L  L+YP++H+E+IAF+ALFR VC+MM+ISRI+DF+LKDMS+P  KRL RQLSAVINFVRF+EGKEH+Y +AMAKK+ +            ++ EE ED+QD+M                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             LQ QVV+SP+RILREV+D QQ+L+Q
Sbjct:   39 KDHVPQLTMLFERLVETTLGVTKEEMSQPVFAGLGCLTYPELHDESIAFLALFRNVCRMMRISRIEDFALKDMSDPNQKRLRRQLSAVINFVRFKEGKEHLYLDAMAKKQRLAAXXXXXXXXXXKLQEEHEDIQDRMAEKNKAIEAVNAKHEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLQAQVVSSPKRILREVSDLQQSLEQ 265          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: A0A835ZCC3_9STRA (Nuf2 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC3_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.640e-27
Identity = 78/227 (34.36%), Postives = 111/227 (48.90%), Query Frame = 1
Query:    1 QEHVAQVSMIFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKEHMYREAMAKKRAVREKAKAAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAALKQAEVEKGRLQGQVVTSPQRILREVADQQQALDQ 681
            Q++V +V  +F KLV+   GVT+E+M+QP FA L+VL+Y  +HE+++  +A FRAV KMM  S + DFS  D+  P   RL RQLSAVINF  FREG+  +Y     +K  +    +A    +  +  EL  L ++                                                         K+A +E+ RLQ Q+V+SP RI RE+ADQQ AL+Q
Sbjct:   48 QKNVQEVQNVFAKLVEFTMGVTREEMNQPVFAGLNVLNYAQLHEDSVPELAFFRAVSKMMTASCVHDFSFNDLQTPNKTRLKRQLSAVINFCMFREGRMQVYNALATEKENLLANVQALGEDNERLERELASLTERTSQEAAETEMVEADCRAMEAQISALNREQAATRAQSGDLKRQANGLKDRLAALDLETKEAIMERERLQAQIVSSPDRIRREMADQQAALEQ 274          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: W7TPN5_9STRA (Kinetochore protein Nuf2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPN5_9STRA)

HSP 1 Score: 112 bits (280), Expect = 4.050e-25
Identity = 70/218 (32.11%), Postives = 109/218 (50.00%), Query Frame = 1
Query:    4 EHVAQVSMIFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKEHMYREAMAKKRAVREKAKAAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAALKQAEVEKGRLQGQVVTSPQRILREVA 657
            +H   +   +E LV+  TG+TKE+MSQPAF+ ++ L+YP++HEE+I  +A FRA  KMM +  + DFS+KD+  P+PKR+ R LSA+INF +FRE +  MY E   K+  + +  K  Q     V +EL  L+++                                                      +AL+    E+ + +GQ+V SP+R+ RE+A
Sbjct:   69 KHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELA 286          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: A0A4D9D8Z4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8Z4_9STRA)

HSP 1 Score: 112 bits (280), Expect = 8.070e-25
Identity = 70/218 (32.11%), Postives = 109/218 (50.00%), Query Frame = 1
Query:    4 EHVAQVSMIFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKEHMYREAMAKKRAVREKAKAAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAALKQAEVEKGRLQGQVVTSPQRILREVA 657
            +H   +   +E LV+  TG+TKE+MSQPAF+ ++ L+YP++HEE+I  +A FRA  KMM +  + DFS+KD+  P+PKR+ R LSA+INF +FRE +  MY E   K+  + +  K  Q     V +EL  L+++                                                      +AL+    E+ + +GQ+V SP+R+ RE+A
Sbjct:  723 KHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAEREEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELA 940          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: A0A2D4C6D6_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6D6_PYTIN)

HSP 1 Score: 98.2 bits (243), Expect = 3.850e-20
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1
Query:   10 VAQVSMIFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFRE 288
            VA +  + E  ++T  GV++E+M+QP FA LSVLSYP++HE++I  +  FR   K+M+   I DFS+KD+  P PKR+ RQLSA+INF +FR+
Sbjct:   58 VAAIRKVLEVFIETTMGVSREEMNQPQFAGLSVLSYPELHEDSIPELTFFRQASKLMQACGIYDFSMKDVLTPNPKRVRRQLSALINFAKFRD 150          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: A0A2V0P211_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P211_9CHLO)

HSP 1 Score: 97.8 bits (242), Expect = 6.100e-20
Identity = 52/130 (40.00%), Postives = 80/130 (61.54%), Query Frame = 1
Query:   19 VSMIFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKEHMYREAMAK-------KRAVREKAKAAQLRHSEVVEE 387
            V  IFE ++   TG+T+ED++QP FAA+    YP++H+E+IA  + F  + ++M +  + DF +KD+ +P P RL R LSA+INF +FRE K   Y E  A+       KRA+RE+ +A +     + EE
Sbjct:   38 VGPIFENILVNLTGITREDLNQPVFAAIDAFEYPELHDESIAARSFFAQLSRLMAVCGVKDFGMKDVHKPDPARLRRHLSAIINFAKFREEKLVAYAELQARLESLAEQKRALREEQEARECELQRLQEE 167          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: A0A8K1C789_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C789_PYTOL)

HSP 1 Score: 95.5 bits (236), Expect = 3.120e-19
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1
Query:   10 VAQVSMIFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFRE 288
            VA +  IFE  ++   GV +E+M+QP FA LSVLSYP++HE++I  +  FR   K+M    + DF LKD+  P PKR+ RQLSA+INF +FR+
Sbjct:   41 VAAIRKIFEVFIENIMGVGREEMNQPQFAGLSVLSYPELHEDSIPEITFFRQATKLMNACGVYDFGLKDVLTPNPKRVRRQLSALINFAKFRD 133          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: A0A2K1JPN4_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JPN4_PHYPA)

HSP 1 Score: 95.5 bits (236), Expect = 3.260e-19
Identity = 43/104 (41.35%), Postives = 72/104 (69.23%), Query Frame = 1
Query:    1 QEHVAQVSM-----IFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKE 297
            ++H+ + SM     ++E LV    G+T+E++ QPAF A+  L YP++HEE++  +A  RA+ K+M ++ +DDFS  D+ +P+ KR I  LSA+IN ++F++GKE
Sbjct:   27 EQHLVKPSMETVWPVYESLVLNIMGITREELQQPAFHAIEKLEYPELHEESVGILASIRAISKLMAVTGVDDFSTMDIFKPESKRTITHLSAIINLLKFKQGKE 130          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: F0WBG7_9STRA (Kinetochore protein NUF2like protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBG7_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 3.500e-19
Identity = 44/90 (48.89%), Postives = 63/90 (70.00%), Query Frame = 1
Query:   19 VSMIFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFRE 288
            +  IFE  ++T  G++KE+MSQPAF+ L  L +P++HEE+I  +  FR + K+M    I DF+ +D+  P PKRL RQLSA+INF +FRE
Sbjct:   62 IRKIFEVFIETIMGISKEEMSQPAFSGLRALDFPELHEESIPELTFFRTISKLMGYCGIYDFNFRDLLHPSPKRLRRQLSALINFAKFRE 151          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G7NUH2_SACJA1.230e-5963.44Nuf2p n=1 Tax=Saccharina japonica TaxID=88149 RepI... [more]
D8LMS3_ECTSI3.270e-4759.91Centromere-associated protein NUF2 n=2 Tax=Ectocar... [more]
A0A835ZCC3_9STRA1.640e-2734.36Nuf2 family-domain-containing protein n=1 Tax=Trib... [more]
W7TPN5_9STRA4.050e-2532.11Kinetochore protein Nuf2 n=1 Tax=Nannochloropsis g... [more]
A0A4D9D8Z4_9STRA8.070e-2532.11Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2D4C6D6_PYTIN3.850e-2049.46Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A2V0P211_9CHLO6.100e-2040.00Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A8K1C789_PYTOL3.120e-1949.46Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2K1JPN4_PHYPA3.260e-1941.35Uncharacterized protein n=3 Tax=Physcomitrium pate... [more]
F0WBG7_9STRA3.500e-1948.89Kinetochore protein NUF2like protein putative n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50972contigH-elongata_contig50972:1363..3629 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score165.6
Seed ortholog evalue2.6e-38
Seed eggNOG ortholog2880.D8LMS3
Preferred nameNUF2
KEGG koko:K10577,ko:K11548
KEGG Pathwayko03013,ko04064,ko04120,ko05206,map03013,map04064,map04120,map05206
KEGG ModuleM00427
GOsGO:0000003,GO:0000070,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000777,GO:0000778,GO:0000779,GO:0000780,GO:0000793,GO:0000794,GO:0000819,GO:0003674,GO:0005198,GO:0005200,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005815,GO:0005816,GO:0005819,GO:0005856,GO:0005874,GO:0005876,GO:0006996,GO:0007010,GO:0007017,GO:0007020,GO:0007049,GO:0007059,GO:0007080,GO:0007127,GO:0008150,GO:0008608,GO:0009987,GO:0015630,GO:0016043,GO:0022402,GO:0022414,GO:0022607,GO:0031109,GO:0031262,GO:0031617,GO:0031974,GO:0031981,GO:0032991,GO:0034622,GO:0035974,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044454,GO:0044464,GO:0045132,GO:0045143,GO:0046785,GO:0048285,GO:0050000,GO:0051179,GO:0051234,GO:0051258,GO:0051276,GO:0051303,GO:0051310,GO:0051315,GO:0051316,GO:0051321,GO:0051455,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0061982,GO:0065003,GO:0070013,GO:0071840,GO:0097435,GO:0098687,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140013,GO:0140014,GO:1903046,GO:1903047
EggNOG free text desc.cell division
EggNOG OGsKOG4438@1,KOG4438@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03036,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCentromere-associated protein NUF2
Ec32 orthologEc-02_003450.1
Exons6
Model size681
Cds size657
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930835.7289042-UTR-H-elongata_contig50972:1362..13861622930835.7289042-UTR-H-elongata_contig50972:1362..1386Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50972 1363..1386 +
1691679591.053272-UTR-H-elongata_contig50972:1362..13861691679591.053272-UTR-H-elongata_contig50972:1362..1386Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50972 1363..1386 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930835.7477279-CDS-H-elongata_contig50972:1386..14941622930835.7477279-CDS-H-elongata_contig50972:1386..1494Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50972 1387..1494 +
1691679591.0759115-CDS-H-elongata_contig50972:1386..14941691679591.0759115-CDS-H-elongata_contig50972:1386..1494Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50972 1387..1494 +
1622930835.9113028-CDS-H-elongata_contig50972:1999..21061622930835.9113028-CDS-H-elongata_contig50972:1999..2106Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50972 2000..2106 +
1691679591.085703-CDS-H-elongata_contig50972:1999..21061691679591.085703-CDS-H-elongata_contig50972:1999..2106Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50972 2000..2106 +
1622930835.9291067-CDS-H-elongata_contig50972:2359..24801622930835.9291067-CDS-H-elongata_contig50972:2359..2480Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50972 2360..2480 +
1691679591.0954254-CDS-H-elongata_contig50972:2359..24801691679591.0954254-CDS-H-elongata_contig50972:2359..2480Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50972 2360..2480 +
1622930835.948865-CDS-H-elongata_contig50972:2758..28241622930835.948865-CDS-H-elongata_contig50972:2758..2824Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50972 2759..2824 +
1691679591.1056955-CDS-H-elongata_contig50972:2758..28241691679591.1056955-CDS-H-elongata_contig50972:2758..2824Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50972 2759..2824 +
1622930835.9691904-CDS-H-elongata_contig50972:3039..32041622930835.9691904-CDS-H-elongata_contig50972:3039..3204Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50972 3040..3204 +
1691679591.1160855-CDS-H-elongata_contig50972:3039..32041691679591.1160855-CDS-H-elongata_contig50972:3039..3204Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50972 3040..3204 +
1622930835.9866316-CDS-H-elongata_contig50972:3539..36291622930835.9866316-CDS-H-elongata_contig50972:3539..3629Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50972 3540..3629 +
1691679591.1273825-CDS-H-elongata_contig50972:3539..36291691679591.1273825-CDS-H-elongata_contig50972:3539..3629Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50972 3540..3629 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50972.12355.1prot_H-elongata_contig50972.12355.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig50972 1387..3629 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig50972.12355.1

>prot_H-elongata_contig50972.12355.1 ID=prot_H-elongata_contig50972.12355.1|Name=mRNA_H-elongata_contig50972.12355.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bp
MIFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCK
MMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKEHMYREAMAK
KRAVREKAKAAQLRHSEVVEELEDLQDKMAEKKEAIKEITAKTNAVKSET
AELSRSAVAIREECAELKKASFAAKDRVADVQAALKQAEVEKGRLQGQVV
TSPQRILREVADQQQALDQ
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mRNA from alignment at H-elongata_contig50972:1363..3629+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig50972.12355.1 ID=mRNA_H-elongata_contig50972.12355.1|Name=mRNA_H-elongata_contig50972.12355.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2267bp|location=Sequence derived from alignment at H-elongata_contig50972:1363..3629+ (Himanthalia elongata Himel1 dioecious)
CAGGAGCACGTGGCTCAGGTTTCCATGATATTCGAAAAGCTCGTCGACAC GGCAACGGGGGTGACGAAGGAGGACATGAGCCAACCCGCGTTCGCAGCGC TGAGCGTCTTATCTTACCCCGACATCCATGAGGTGCCGTTGAACAGAGCA AATTATCTCGGAACGATCTATTCTGTCTTCTTTCTTGAAATCTTTTTCAC CCTTTTTTCATTCTCCATCCCACAACACCCTAGTTACGGCATTTTACGGT GGGACTGGTTCTTGGAACGCTTACCTGAAGAATCAACGGCCATTCCCCGA GACTCACGGGTTCAAGAAGTGTCCCGTGGTTCTGTCTATGGCCAACGTCT GCCGTGCGATGTATTTTGCATAACGCGTAGCGCCCGCCCGATATATTTTG ATTTGGTGCCACACTCAGCCAACGCATGAGTTCTGGCTCGCGTTGTTACC CAGCTCTTGTTTTGCGGGAACGGGGTGCTGGTCAGAAATTCCACTAGCAA GAAGCAGGCGTGAGCGTTTGCGCTGGGAACACGCCTAACATCCAATCATT TATAATTAATGAAGCGCTGTTGATGCTACCACCTGTTTGTCGTTTCCGTG GTCACACACGGGGGTGTGGGTCGTCCGACGCGAGCAGGAGAACATCGCGT TTATGGCGCTCTTTCGCGCCGTGTGCAAGATGATGAAAATCTCGCGCATC GACGACTTCTCGCTCAAGGACATGTCGGAACCCAAGCCTAAGCGGTCAGT AGTGGTGCGCCCCGTTCGGAGGGTATCCCACAAGGAGACGTTCCCGTTGC TCGGGTCGAAACATACTCGCCTCCGCTCGCGATTACATTTTCCTATTTTA TTTTATATTTTTTTATCATATGAATCGCTTGATTGCGTAGCTCGGCCACC GTATCTTACGGCAAATTCTACTACGTGCTGTTTCCGTTGGATCGTTTGAT GTGCTGTTTCCTCCGCCGTACGCTGCTTTTCTCCCGCTGACTGACAGCCT GATCCGCCAGTTGAGCGCGGTCATCAATTTCGTTCGCTTCCGCGAAGGCA AAGAACACATGTACCGGGAGGCTATGGCCAAGAAGCGAGCAGTCAGGGAA AAGGCCAAGGCGGCGCAGGTCACAATCGGGTGTCGAAGATGCGGCTTGAT TTTCTGCTCCTTTGCCTCGTGACGTCTTTTGGGGGGGGGTGTGCGTTGCT GCCCCCCCCCCCCCGTGCTTATCGATATTCTCTACGGGAATGCGCCTTTC CTGCTGCGACACCTCCTTCGATCGTCCTCTGCTGTTGAGCGCACCTTACC GTGTATACCAATTGCGTCTGAAAAATGTCTTTAGGAAAACACGGTGCTTG GGCTTTACCGATCTCGAGTGATGTTTTACGCTTGTGTCCTTCGCAGCTTC GACATAGCGAAGTCGTGGAAGAGCTCGAGGATCTTCAGGACAAGATGGCA GAGAAAAAGGAGGTAAAACGTTTCAGCCCACTGACGGTGTCTTTCTCACT CGAACTCTCAAGAGGGACAGCGTTAGCGTTCCCCCAGCCTGTTATTCCCT TCGCCGATTGACCAGACCTGGCCCTGATATATTTTGCACCAGCAATCCCA CCCACCCTCTGCGTCGTGTTCCTTACCGCGGTACTTCCGTGCCGCGCTCA AAACGAACCGAAAACACCGGGGTGCAGGCTATCAAAGAGATAACTGCAAA AACGAACGCGGTCAAGTCGGAGACGGCGGAGCTGAGTCGAAGCGCGGTGG CTATCCGCGAGGAGTGCGCAGAGCTGAAGAAGGCCAGCTTTGCCGCGAAG GACAGAGTGGCCGACGTTCAGGCGGCGCTCAAGCAGGCGGAGGTGGGTAT GCGTTCGACGGCGCCTACAAAGGAGTGGGCGAACGGAAGAAAAGCCTTCT TGTGTAATAATTATTGTAATTTGGCTGGCTGTCGTACTTATTACGTATGG GTGGGGTTTCGAACGAAAACTGTCGTGAAATGTTTCTGTTTCGAAATTTG TGTCGATGATATCGCATCCCTTTTCATGTTTCATGCTTCGGTGTTCCCCG CTTTTGTTAACCGCGATCTTGCGGGACTGTTGGGATCTTCCGGGTTCGCG ATGAATAGTAGTTTTCTTGACAGTTTTTACGTGGTGTTGGCCATTTCTGT GCGCGCACGTCCTTGCTACCGAGGCAGGTAGAGAAAGGACGCCTTCAGGG ACAAGTAGTGACCTCGCCCCAGCGCATCCTGAGGGAAGTGGCGGACCAAC AGCAAGCCTTGGATCAG
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Coding sequence (CDS) from alignment at H-elongata_contig50972:1363..3629+

>mRNA_H-elongata_contig50972.12355.1 ID=mRNA_H-elongata_contig50972.12355.1|Name=mRNA_H-elongata_contig50972.12355.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1314bp|location=Sequence derived from alignment at H-elongata_contig50972:1363..3629+ (Himanthalia elongata Himel1 dioecious)
ATGATATTCGAAAAGCTCGTCGACACGGCAACGGGGGTGACGAAGGAGGA
CATGAGCCAACCCGCGTTCGCAGCGCTGAGCGTCTTATCTTACCCCGACA
TCCATGAGATGATATTCGAAAAGCTCGTCGACACGGCAACGGGGGTGACG
AAGGAGGACATGAGCCAACCCGCGTTCGCAGCGCTGAGCGTCTTATCTTA
CCCCGACATCCATGAGGAGAACATCGCGTTTATGGCGCTCTTTCGCGCCG
TGTGCAAGATGATGAAAATCTCGCGCATCGACGACTTCTCGCTCAAGGAC
ATGTCGGAACCCAAGCCTAAGCGGAGAACATCGCGTTTATGGCGCTCTTT
CGCGCCGTGTGCAAGATGATGAAAATCTCGCGCATCGACGACTTCTCGCT
CAAGGACATGTCGGAACCCAAGCCTAAGCGCCTGATCCGCCAGTTGAGCG
CGGTCATCAATTTCGTTCGCTTCCGCGAAGGCAAAGAACACATGTACCGG
GAGGCTATGGCCAAGAAGCGAGCAGTCAGGGAAAAGGCCAAGGCGGCGCA
GCCTGATCCGCCAGTTGAGCGCGGTCATCAATTTCGTTCGCTTCCGCGAA
GGCAAAGAACACATGTACCGGGAGGCTATGGCCAAGAAGCGAGCAGTCAG
GGAAAAGGCCAAGGCGGCGCAGCTTCGACATAGCGAAGTCGTGGAAGAGC
TCGAGGATCTTCAGGACAAGATGGCAGAGAAAAAGGAGCTTCGACATAGC
GAAGTCGTGGAAGAGCTCGAGGATCTTCAGGACAAGATGGCAGAGAAAAA
GGAGGCTATCAAAGAGATAACTGCAAAAACGAACGCGGTCAAGTCGGAGA
CGGCGGAGCTGAGTCGAAGCGCGGTGGCTATCCGCGAGGAGTGCGCAGAG
CTGAAGAAGGCCAGCTTTGCCGCGAAGGACAGAGTGGCCGACGTTCAGGC
GGCGCTCAAGCAGGCGGAGGCTATCAAAGAGATAACTGCAAAAACGAACG
CGGTCAAGTCGGAGACGGCGGAGCTGAGTCGAAGCGCGGTGGCTATCCGC
GAGGAGTGCGCAGAGCTGAAGAAGGCCAGCTTTGCCGCGAAGGACAGAGT
GGCCGACGTTCAGGCGGCGCTCAAGCAGGCGGAGGTAGAGAAAGGACGCC
TTCAGGGACAAGTAGTGACCTCGCCCCAGCGCATCCTGAGGGAAGTGGCG
GACCAACAGCAAGCCTTGGATCAGGTAGAGAAAGGACGCCTTCAGGGACA
AGTAGTGACCTCGCCCCAGCGCATCCTGAGGGAAGTGGCGGACCAACAGC
AAGCCTTGGATCAG
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