mRNA_H-elongata_contig50800.12335.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig50800.12335.1
Unique NamemRNA_H-elongata_contig50800.12335.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig50800.12335.1 vs. uniprot
Match: D8LK38_ECTSI (Yme1 homolog, mitochondrial inner membrane i-AAA protease n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK38_ECTSI)

HSP 1 Score: 612 bits (1579), Expect = 7.530e-213
Identity = 325/423 (76.83%), Postives = 364/423 (86.05%), Query Frame = 1
Query:    1 QAEFFIPLAEKYPEQAMSRFESGQFPVNVAIKEAYLKAAAAVGRTNQVDMQAVLARPEASG--HVASAPGFGGI--HPRNVVSAGPKGAPGSYGEPLHVTVSDMG-WKNNMFKLLRFVVAAFFIATVVSSFLDLSLGSKLMPASSVHMAETSDKTFEDVVGIDEAKAELEEIVLYLKNPTVFTRLGGKLPQGLMLTGPPGTGKTLLARAIAGEAGVPFYYSSGSEFEEMFVGVGAKRVRDLFAAAKKSSPCIIFIDEIDAIGASRQLRESSAMKMTLNQLLVEMDGFEQNSGIIVIAATNFPETLDHALMRPGRFDKHVAVPLPDVRGREKILMMYASRTILDAKANLKSLAQGTPGFSGADLYNLVNQAAVKASLDGAKAVTTEALEWAKDKILMGAERRSAVIDKETAKCTAFHEGGHAIV 1254
            +A F  PLAEKYPEQAMSRFESGQFP+N A K AY+KAA+A+GR +QVD+QA++A PEA G   +A A GFGG                 G  GEPL VT+++    K N+F L++F V  FFIA +V S  DL+  SKL+ A SVHMAETSDKTF+DVVG+DEAK+ELEEIV+YLKNP +FTRLGGKLP+GLMLTGPPGTGKTLLARAIAGEAGVPFYYSSGSEFEEMFVGVGAKRVR+LFAAAKK++PCIIFIDEIDAIG+SRQLR+SSA+KMTLNQLLVEMDGF+QNS IIVIAATNFP+TLDHAL RPGRFDKHVAVPLPDVRGRE+IL +Y SRTILD+ ANLK+LAQGTPGFSGADL NLVNQAAVKASLDGAKA+TTEALEWAKDKILMGAERRSAVI +ETAKCTAFHEGGHAIV
Sbjct:  124 EANFLAPLAEKYPEQAMSRFESGQFPINSASKMAYVKAASALGRMDQVDIQALMAMPEAGGVNQMAGAQGFGGAGXXXXXXXXXXXXXXXGGQGEPLRVTIANPNAMKQNLFGLVQFTVKWFFIAVIVYSLFDLAANSKLVAAPSVHMAETSDKTFDDVVGVDEAKSELEEIVMYLKNPQMFTRLGGKLPRGLMLTGPPGTGKTLLARAIAGEAGVPFYYSSGSEFEEMFVGVGAKRVRELFAAAKKTAPCIIFIDEIDAIGSSRQLRDSSALKMTLNQLLVEMDGFDQNSNIIVIAATNFPQTLDHALTRPGRFDKHVAVPLPDVRGREQILGLYTSRTILDSAANLKALAQGTPGFSGADLSNLVNQAAVKASLDGAKAITTEALEWAKDKILMGAERRSAVISEETAKCTAFHEGGHAIV 546          
BLAST of mRNA_H-elongata_contig50800.12335.1 vs. uniprot
Match: A0A4D9D7V2_9STRA (AAA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7V2_9STRA)

HSP 1 Score: 461 bits (1187), Expect = 5.340e-153
Identity = 243/440 (55.23%), Postives = 317/440 (72.05%), Query Frame = 1
Query:    1 QAEFFIPLAEKYPEQAMSRFESGQFPVNVAIKEAYLKAAAAVGRTNQVDMQAVLARPEASGHVASAPGFGGIHP-RNVVSAGPK------------------GAPGSY--GEPLHVTVSDMGWKNNMFKLLRFVVAAFFIATVVSSFLD-LSLGSKLMPASSVHMAETSDKTFEDVVGIDEAKAELEEIVLYLKNPTVFTRLGGKLPQGLMLTGPPGTGKTLLARAIAGEAGVPFYYSSGSEFEEMFVGVGAKRVRDLFAAAKKSSPCIIFIDEIDAIGASRQLRESSAMKMTLNQLLVEMDGFEQNSGIIVIAATNFPETLDHALMRPGRFDKHVAVPLPDVRGREKILMMYASRTILDAKANLKSLAQGTPGFSGADLYNLVNQAAVKASLDGAKAVTTEALEWAKDKILMGAERRSAVIDKETAKCTAFHEGGHAIV 1254
            Q  F   L + YPE  ++R+E G+F VN  + + YLKA A VG+ + + ++ +L    A G         G+   R  + A                      A G Y   +PL+VT+ + G+K  +++  RF +  F + + +S+ +D   + SKLM ++++HMAE+SDK F DV+G+DEAK ELEEIVLYLK+P+ FTRLGGKLP+GL+L GPPGTGKTLLARAIAGEAGVPF+Y+SGSEFEEM+VGVGA+RVRDLF AAKK +PCIIF+DEIDAIG +R L++  AMKMTLNQLLVE+DGFEQN G+I+I ATNFP++LD AL+RPGRFDKHV VPLPD+ GR++IL +Y  +   D+  N+  LA+GTPG SGA+L NL+N+AA+KAS+DG KA+     EWAKDKI+MG+ERRSAVI KETA  TA+HEGGHA+V
Sbjct:  157 QYRFLKELGKSYPEAVITRYEGGRFAVNEGVTKEYLKALAKVGKLDSMPLRPLLQPMVAGGTEGGGRVAAGVEGGREALGAAXXXXXXXXXXXXXXXXXXAASALGGYDPSQPLYVTMVEPGFKQQLWRTFRFTLFVFLVISGLSAMIDDKGISSKLMMSTNLHMAESSDKRFSDVMGVDEAKQELEEIVLYLKDPSRFTRLGGKLPKGLLLLGPPGTGKTLLARAIAGEAGVPFFYASGSEFEEMYVGVGARRVRDLFEAAKKRAPCIIFVDEIDAIGGARHLKDQQAMKMTLNQLLVELDGFEQNKGVIIIGATNFPQSLDEALLRPGRFDKHVQVPLPDILGRKQILELYVKKIPTDSDVNMDVLARGTPGMSGAELSNLINEAALKASIDGLKAINMATFEWAKDKIMMGSERRSAVISKETATVTAYHEGGHALV 596          
BLAST of mRNA_H-elongata_contig50800.12335.1 vs. uniprot
Match: A0A7S2WPS6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPS6_9STRA)

HSP 1 Score: 449 bits (1155), Expect = 3.250e-150
Identity = 245/422 (58.06%), Postives = 312/422 (73.93%), Query Frame = 1
Query:   10 FFIPLAEKYPEQAMSRFESGQFPVNVAIKEAYLKAAAAVGRTNQVDMQAVLARPEASGHVASAPGFGGIHPRNVVSAGPKGAPGSYGEPLHVTVSDMGWK----NNMFKLLRFVVAAFFIATVVSSFLDLSLG---SKLMPASSVHMAETSDKTFEDVVGIDEAKAELEEIVLYLKNPTVFTRLGGKLPQGLMLTGPPGTGKTLLARAIAGEAGVPFYYSSGSEFEEMFVGVGAKRVRDLFAAAKKSSPCIIFIDEIDAIGASRQLRESSAMKMTLNQLLVEMDGFEQNSGIIVIAATNFPETLDHALMRPGRFDKHVAVPLPDVRGREKILMMYASRTILDAKANLKSLAQGTPGFSGADLYNLVNQAAVKASLDGAKAVTTEALEWAKDKILMGAERRSAVIDKETAKCTAFHEGGHAIV 1254
            F   L EKYP+  + R+ESG+F  +  +K  Y+KA   +GRT    + A +    A+G + S    GG+   + ++A  + A  S   PLHV V   GW+    +  +   R+ + AF + T+V + +D   G   S++     VH AETSDK F DV+G+DEAK+EL+EIV+YLKNPT FTRLGG++P+G++L GPPGTGKTLLARAIAGEAGVPF+Y+SGSEFEEM+VGVGA+R+RD+F AAKK SPCIIFIDEIDA+G+SRQL+E  AMKMTLNQLLVEMDGFEQN GIIVI ATN+ + LD AL+RPGRFD+HV VPLPD++GR +IL +Y  R       +L +LA+GTPG SGA+L+NLVNQAA+KASLDGAK V  +  E+AKDKILMGAER+SAVI  ETA+ TA+HEGGHA+V
Sbjct:   64 FVRELNEKYPDAVVQRYESGKFQEHPQVKLEYVKALHKLGRTPPAAVAASV-EAGAAGRLVSG---GGVAAESDLAA--QMANMSARSPLHVKVVQ-GWQGMAYSGFWTTARWGIVAFLVVTMVGALMDERTGGVSSRMGGTHQVHSAETSDKRFNDVMGVDEAKSELQEIVMYLKNPTKFTRLGGQMPRGVLLMGPPGTGKTLLARAIAGEAGVPFFYASGSEFEEMYVGVGARRMRDMFEAAKKRSPCIIFIDEIDAVGSSRQLKEQQAMKMTLNQLLVEMDGFEQNKGIIVIGATNYADVLDDALLRPGRFDRHVTVPLPDIKGRRQILELYTQRVTAAKDLDLDTLARGTPGMSGAELFNLVNQAALKASLDGAKRVCMKDFEYAKDKILMGAERKSAVISPETARLTAYHEGGHALV 478          
BLAST of mRNA_H-elongata_contig50800.12335.1 vs. uniprot
Match: A0A7S3ZZB8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZB8_9STRA)

HSP 1 Score: 450 bits (1158), Expect = 3.970e-150
Identity = 249/424 (58.73%), Postives = 309/424 (72.88%), Query Frame = 1
Query:    1 QAEFFIPLAEKYPEQAMSRFESGQFPVNVAIKEA----YLKAAAAVGRTNQVDMQAVLARPEASGHVASAPGFGGIHPRNVVSAGPKGAPGSYGEPLHVTVSDMGWKNNMFKLLRFVVAAFFIATVVSSFLD-LSLGSKLMPASS-VHMAETSDKTFEDVVGIDEAKAELEEIVLYLKNPTVFTRLGGKLPQGLMLTGPPGTGKTLLARAIAGEAGVPFYYSSGSEFEEMFVGVGAKRVRDLFAAAKKSSPCIIFIDEIDAIGASRQLRESSAMKMTLNQLLVEMDGFEQNSGIIVIAATNFPETLDHALMRPGRFDKHVAVPLPDVRGREKILMMYASRTILDAKANLKSLAQGTPGFSGADLYNLVNQAAVKASLDGAKAVTTEALEWAKDKILMGAERRSAVIDKETAKCTAFHEGGHAIV 1254
            Q  F   L + +PE A+ R E+       A+ E     YLKA  A GR + + +  V  R  A+     A    G+     V+     A G+   P+ V V   GWK+ +++ +R +  AF   +   + LD   + S+L   SS VH AE+SDK F DV G+DEAKAELEEIV+YLK+P  FTRLGGKLP+G +L GPPGTGKTLLARAIAGEAGVPF+Y+SGSEFEEM+VGVGA+RVRDLF AAKK SPCI+FIDEIDAIGASR L+E  AMKMTLNQLLVEMDGFEQN G+IVI ATN  ++LD AL+RPGRFD+HVAVPLPD+ GR++IL ++AS+  LD KA+L +LA+GTPG SGADL NLVNQAA+KA+LDG ++VT  AL++AKDKILMGAER+SAV+ +ET + TAFHEGGHA+V
Sbjct:   66 QMAFVRELGKTHPEAALRRIEALDPARQAALLEPLTREYLKALVATGRVDTMALADVRKRLLATAAATKASAEAGMSAAAPVAG--LAAVGTAANPVQVAVVQAGWKSQLWRTVRVLAVAFLALSAFGALLDEKGVSSRLGATSSAVHTAESSDKRFSDVCGVDEAKAELEEIVMYLKDPGRFTRLGGKLPKGCLLMGPPGTGKTLLARAIAGEAGVPFFYASGSEFEEMYVGVGARRVRDLFDAAKKRSPCIVFIDEIDAIGASRHLKEQQAMKMTLNQLLVEMDGFEQNQGVIVIGATNIADSLDPALLRPGRFDRHVAVPLPDIEGRKQILQLHASKVPLDPKADLTTLAKGTPGMSGADLSNLVNQAALKAALDGLESVTASALDYAKDKILMGAERKSAVLSEETIRMTAFHEGGHALV 487          
BLAST of mRNA_H-elongata_contig50800.12335.1 vs. uniprot
Match: A0A7R9YBA3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBA3_9STRA)

HSP 1 Score: 447 bits (1149), Expect = 5.460e-147
Identity = 249/465 (53.55%), Postives = 317/465 (68.17%), Query Frame = 1
Query:   10 FFIPLAEKYPEQAMSRFESGQFPVNVAIKEAYLKAAAAVGRTNQVDMQAVLARPEA-----SGHVASA--------------------------------------PGFGGIHPRNVVSAG------PKGAPGSYGEPLHVTVSDMGWKNNMFKLLRFVVAAFFIATVVSSFLD-LSLGSKLMPASSVHMAETSDKTFEDVVGIDEAKAELEEIVLYLKNPTVFTRLGGKLPQGLMLTGPPGTGKTLLARAIAGEAGVPFYYSSGSEFEEMFVGVGAKRVRDLFAAAKKSSPCIIFIDEIDAIGASRQLRESSAMKMTLNQLLVEMDGFEQNSGIIVIAATNFPETLDHALMRPGRFDKHVAVPLPDVRGREKILMMYASRTILDAKANLKSLAQGTPGFSGADLYNLVNQAAVKASLDGAKAVTTEALEWAKDKILMGAERRSAVIDKETAKCTAFHEGGHAIV 1254
            F   L + YPE  + RFESG++ V+  I + Y+KA A  G+ +   +++++AR        +G  AS+                                      P +     R   +AG      P    G    PL V ++D GWK  +++ LR +   F I +   + +D  S+GS+L  +S +H AE SDK F DVVG+DEAKAELEE+V+YL++P  FTRLGGKLP+GL+L GPPGTGKTLLARAIAGEAGVPF+Y+SGSEFEEM+VGVGA+RVRDLF AAKK SPCIIFIDEIDA+G SRQL++ +AMKMTLNQLLVEMDGFEQN+G+IVI ATNF ++LD ALMRPGRFD+HVAVPLPDV GR+ IL +Y  +  + A  +++ LA+GTPG SGADL NLVNQAA+KA++DG  AV   ALE+AKDKILMGAER+SA I  +TA+ TA+HEGGHA+V
Sbjct:  160 FLKELNQHYPEAVVRRFESGRYAVSEPIVKEYIKALAETGKLDSTPIESLMARVAGRQVAPAGAAASSAXXXXXXXXXXXXXXXXXALEAEMASMASNAPKRPTPGPAWEAAAARTASAAGGVQSQMPDKVVGVPESPLVVQMADAGWKTQLWRTLRMLAVVFVIVSAFGALMDDRSIGSRLGLSSPIHTAENSDKRFSDVVGMDEAKAELEEVVMYLRSPERFTRLGGKLPKGLLLMGPPGTGKTLLARAIAGEAGVPFFYASGSEFEEMYVGVGARRVRDLFEAAKKRSPCIIFIDEIDAVGGSRQLKDQAAMKMTLNQLLVEMDGFEQNNGVIVIGATNFADSLDDALMRPGRFDRHVAVPLPDVAGRKAILDLYTGKIPIAADVDVEVLARGTPGMSGADLSNLVNQAALKAAVDGFMAVNMAALEYAKDKILMGAERKSAAITPDTARMTAYHEGGHALV 624          
BLAST of mRNA_H-elongata_contig50800.12335.1 vs. uniprot
Match: A0A835ZC64_9STRA (Peptidase family M41-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC64_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 4.630e-145
Identity = 215/283 (75.97%), Postives = 251/283 (88.69%), Query Frame = 1
Query:  406 MPASSVHMAETSDKTFEDVVGIDEAKAELEEIVLYLKNPTVFTRLGGKLPQGLMLTGPPGTGKTLLARAIAGEAGVPFYYSSGSEFEEMFVGVGAKRVRDLFAAAKKSSPCIIFIDEIDAIGASRQLRESSAMKMTLNQLLVEMDGFEQNSGIIVIAATNFPETLDHALMRPGRFDKHVAVPLPDVRGREKILMMYASRTILDAKANLKSLAQGTPGFSGADLYNLVNQAAVKASLDGAKAVTTEALEWAKDKILMGAERRSAVIDKETAKCTAFHEGGHAIV 1254
            MPA+++HMAE+SDK F DVVG+DEAKAELEEIVLYLK+P  FTRLGGKLP+G++LTGPPGTGKTLLARAIAGEAGVPF+Y+SGSEFEEMFVGVGAKRVRDLF  AK+ SPCIIFIDEIDAIG SR  R+  +MKMTLNQLLVEMDGFEQN+G+IVIAATNFPE LD AL+RPGRFD+ V+VPLPD+ GR +IL +Y+S+T LD   +L  +A+GTPG SGADL NL+NQAA+KASLDGA AVT + +EWAKDKILMGAE ++AVI +ETAK TA+HEGGHA+V
Sbjct:    1 MPANTIHMAESSDKRFTDVVGVDEAKAELEEIVLYLKDPRRFTRLGGKLPRGILLTGPPGTGKTLLARAIAGEAGVPFFYTSGSEFEEMFVGVGAKRVRDLFREAKQRSPCIIFIDEIDAIGGSRTQRDQQSMKMTLNQLLVEMDGFEQNNGVIVIAATNFPEGLDRALVRPGRFDRRVSVPLPDINGRLQILELYSSKTKLDKCVDLNVVARGTPGMSGADLANLINQAALKASLDGANAVTMDTIEWAKDKILMGAELKNAVISEETAKMTAYHEGGHALV 283          
BLAST of mRNA_H-elongata_contig50800.12335.1 vs. uniprot
Match: A0A7S2CFH8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFH8_9STRA)

HSP 1 Score: 428 bits (1100), Expect = 2.930e-143
Identity = 222/332 (66.87%), Postives = 270/332 (81.33%), Query Frame = 1
Query:  274 PLHVTV--SDMGWKNN-MFKLLRFVVAAFFIATVVSSFLDL--SLGSKLMPASSVHMAETSDKTFEDVVGIDEAKAELEEIVLYLKNPTVFTRLGGKLPQGLMLTGPPGTGKTLLARAIAGEAGVPFYYSSGSEFEEMFVGVGAKRVRDLFAAAKKSSPCIIFIDEIDAIGASRQLRESSAMKMTLNQLLVEMDGFEQNSGIIVIAATNFPETLDHALMRPGRFDKHVAVPLPDVRGREKILMMYASRTILDAKANLKSLAQGTPGFSGADLYNLVNQAAVKASLDGAKAVTTEALEWAKDKILMGAERRSAVIDKETAKCTAFHEGGHAIV 1254
            PLHV V  S  GW ++ M+  +R+ V AF + ++V + +D    + S++     VH AETSDK F DV+G DEAKAELEEIV+YLKNP  FTRLGGKLP G++L GPPGTGKTLLARAIAGEAGVPF+Y+SGSEFEEM+VGVGA+R+RDLF AAKK SPCIIFIDEIDA+G+SR L+E  AMKMTLNQLLVEMDGFEQN GIIVI ATN+ + LD ALMRPGRFD+HVAVPLPD++GR++IL +Y ++       +LK+LA+GTPG SGADL+N+VNQAA+KAS+DG   V+  A E+AKDKILMG+ER+SAVI  ETA+ TAFHEGGHA+V
Sbjct:   34 PLHVKVVPSWQGWASSGMWTTVRWGVVAFLVVSMVGALMDERGGMSSRMGMNHQVHSAETSDKRFSDVMGCDEAKAELEEIVMYLKNPDRFTRLGGKLPSGMLLMGPPGTGKTLLARAIAGEAGVPFFYASGSEFEEMYVGVGARRMRDLFEAAKKRSPCIIFIDEIDAVGSSRHLKEQQAMKMTLNQLLVEMDGFEQNQGIIVIGATNYADVLDDALMRPGRFDRHVAVPLPDIKGRQQILELYTTKIPTAKDLDLKNLARGTPGMSGADLFNMVNQAALKASVDGKSHVSHAAFEYAKDKILMGSERKSAVISPETARMTAFHEGGHALV 365          
BLAST of mRNA_H-elongata_contig50800.12335.1 vs. uniprot
Match: F0XZ26_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ26_AURAN)

HSP 1 Score: 434 bits (1117), Expect = 1.500e-142
Identity = 223/329 (67.78%), Postives = 271/329 (82.37%), Query Frame = 1
Query:  274 PLHVTVSDMGWKNNMFKLLRFVVAAFFIATVVSSFLD-LSLGSKLMPASS-VHMAETSDKTFEDVVGIDEAKAELEEIVLYLKNPTVFTRLGGKLPQGLMLTGPPGTGKTLLARAIAGEAGVPFYYSSGSEFEEMFVGVGAKRVRDLFAAAKKSSPCIIFIDEIDAIGASRQLRESSAMKMTLNQLLVEMDGFEQNSGIIVIAATNFPETLDHALMRPGRFDKHVAVPLPDVRGREKILMMYASRTILDAKANLKSLAQGTPGFSGADLYNLVNQAAVKASLDGAKAVTTEALEWAKDKILMGAERRSAVIDKETAKCTAFHEGGHAIV 1254
            P+ V V   GW+  +++ LR +  AF   +   + +D   + S+L  AS+ VH AE SDK F DV+G+DEAK ELEEIV++L +PT FTRLGGKLP+G +L GPPGTGKTLLARAIAGEAGVPF+Y+SGSEFEEM+VGVGA+RVRDLF AAKK SPCIIFIDEIDAIGASR L+E  AMKMTLNQLLVEMDGFEQN G+IVI ATN  ++LD AL+RPGRFD+HV+VPLPDV GR++IL +++ +  LDA A++ +LA+GTPG SGADL NLVNQAA+KA+LDG  AVTT+AL++AKDKILMGAERRSAV+ KET K TA+HEGGHA+V
Sbjct:  207 PVQVAVVQAGWRQQLWRTLRVLAVAFIALSAFGALMDDRGMSSRLGAASTAVHTAENSDKRFSDVMGVDEAKQELEEIVMFLSDPTRFTRLGGKLPKGCLLMGPPGTGKTLLARAIAGEAGVPFFYASGSEFEEMYVGVGARRVRDLFEAAKKRSPCIIFIDEIDAIGASRHLKEQQAMKMTLNQLLVEMDGFEQNHGVIVIGATNIADSLDPALLRPGRFDRHVSVPLPDVEGRKQILKLHSGKIPLDADADIDALARGTPGMSGADLSNLVNQAALKAALDGLDAVTTKALDYAKDKILMGAERRSAVLTKETMKMTAYHEGGHALV 535          
BLAST of mRNA_H-elongata_contig50800.12335.1 vs. uniprot
Match: A0A7S3NP87_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NP87_9STRA)

HSP 1 Score: 431 bits (1107), Expect = 3.170e-142
Identity = 216/329 (65.65%), Postives = 272/329 (82.67%), Query Frame = 1
Query:  271 EPLHVTVSDMGWKNNMFKLLRFVVAAFFIATVVSSFLD-LSLGSKLMPASSVHMAETSDKTFEDVVGIDEAKAELEEIVLYLKNPTVFTRLGGKLPQGLMLTGPPGTGKTLLARAIAGEAGVPFYYSSGSEFEEMFVGVGAKRVRDLFAAAKKSSPCIIFIDEIDAIGASRQLRESSAMKMTLNQLLVEMDGFEQNSGIIVIAATNFPETLDHALMRPGRFDKHVAVPLPDVRGREKILMMYASRTILDAKANLKSLAQGTPGFSGADLYNLVNQAAVKASLDGAKAVTTEALEWAKDKILMGAERRSAVIDKETAKCTAFHEGGHAIV 1254
            +PL V+V    W   +++ LR V+ AF   + + + +D   L S+L   +++H AE+SDK F+DVVG+DEAK+ELEE+V+YLK+P  FTRLGGKLP+G +LTGPPGTGKTLLARA+AGEAGVPF+Y+SGSEFEEM+VGVGA+RVRDLF AAKK +PCI+FIDEIDA+G SR L+E  AMKMTLNQLLVEMDGFEQ +G+IV+ ATN  ++LD AL+RPGRFDKHV VPLPDV GR +IL ++A++  L   A+L++LA+GTPG SGADL NL+NQAA+KA+LDGA AV T AL++AKDKILMGAERRSAV+D+ T K TA+HEGGHA+V
Sbjct:  154 KPLEVSVVAASWWTQLWRTLRVVLIAFLALSALGAIMDDRGLSSRLGANTAIHTAESSDKRFDDVVGVDEAKSELEELVMYLKDPERFTRLGGKLPKGCLLTGPPGTGKTLLARAVAGEAGVPFFYASGSEFEEMYVGVGARRVRDLFEAAKKRAPCIVFIDEIDAVGGSRHLKEQQAMKMTLNQLLVEMDGFEQTAGVIVLGATNLADSLDPALLRPGRFDKHVVVPLPDVAGRRQILQLHAAKVPLAVDADLEALARGTPGMSGADLSNLINQAALKAALDGALAVDTAALDFAKDKILMGAERRSAVLDEHTLKTTAYHEGGHALV 482          
BLAST of mRNA_H-elongata_contig50800.12335.1 vs. uniprot
Match: K3W9Y9_GLOUD (AAA domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9Y9_GLOUD)

HSP 1 Score: 427 bits (1097), Expect = 1.200e-141
Identity = 233/421 (55.34%), Postives = 304/421 (72.21%), Query Frame = 1
Query:    1 QAEFFIPLAEKYPEQAMSRFESGQFPVNVAIKEAYLKAAAAVGRTNQVDMQAVLARPEASG--HVASAPGFGGIHPRNVVSAGPKGAPG-SYGEPLHVTVSDMGWKNNMFKLLRFVVAAFFIATVVSSFLDLSLGSKLMPASSVHMAETSDKTFEDVVGIDEAKAELEEIVLYLKNPTVFTRLGGKLPQGLMLTGPPGTGKTLLARAIAGEAGVPFYYSSGSEFEEMFVGVGAKRVRDLFAAAKKSSPCIIFIDEIDAIGASRQLRESSAMKMTLNQLLVEMDGFEQNSGIIVIAATNFPETLDHALMRPGRFDKHVAVPLPDVRGREKILMMYASRTILDAKANLKSLAQGTPGFSGADLYNLVNQAAVKASLDGAKAVTTEALEWAKDKILMGAERRSAVIDKETAKCTAFHEGGHAIV 1254
            Q  F   L + YP   + R E  +F ++ A+++ Y+KA     R + VDM  +LA  +  G     +   F    P  + +AG  GA G S  +P++V++ +  +KNNM+K LR +  AF + + + + LD  +G K+  A+ +  +  SDK F DV G  EAK ELEEIV +LK+P  FTRLGG LP+G++L GPPGTGKTLLARAIAGEAGVPF+YSSGSEFEEM+VGVGA+RVRDLF AAK+ +PCIIFIDEIDAIG +R+++E  AMKMTLNQLLVEMDGF+QN GIIVI ATNFP+ LD+AL+RPGRFD+HV V LPDV GR++IL  YAS+  L    +L  LA+ TPG SGA+L+NLVN+AA++AS+  A+ V  +A E AKDKILMG+ER+SA+I  E+AK TA+HEGGHA+V
Sbjct:   40 QLRFLQELNKNYPALVIRRVEENRFAIDEAVQKEYIKALVKTNRIDGVDMPQLLAGAQRIGGREYGTQSSFSKAAP-TMAAAGAAGAQGVSAQDPVYVSMVEGSFKNNMWKTLRTLGVAFLVVSALGAILDEKVG-KIGGATKISTSTGSDKRFSDVKGASEAKEELEEIVQFLKDPERFTRLGGNLPKGVLLMGPPGTGKTLLARAIAGEAGVPFFYSSGSEFEEMYVGVGARRVRDLFEAAKRKAPCIIFIDEIDAIGGTRKMKEQQAMKMTLNQLLVEMDGFDQNKGIIVIGATNFPDVLDNALIRPGRFDRHVTVALPDVAGRKEILEFYASKIPLGKDVDLDVLARATPGMSGAELFNLVNEAALRASMKNAEVVDMDAFEHAKDKILMGSERKSALITPESAKLTAYHEGGHALV 458          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50800.12335.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK38_ECTSI7.530e-21376.83Yme1 homolog, mitochondrial inner membrane i-AAA p... [more]
A0A4D9D7V2_9STRA5.340e-15355.23AAA domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2WPS6_9STRA3.250e-15058.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3ZZB8_9STRA3.970e-15058.73Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9YBA3_9STRA5.460e-14753.55Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A835ZC64_9STRA4.630e-14575.97Peptidase family M41-domain-containing protein n=1... [more]
A0A7S2CFH8_9STRA2.930e-14366.87Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0XZ26_AURAN1.500e-14267.78AAA domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S3NP87_9STRA3.170e-14265.65Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
K3W9Y9_GLOUD1.200e-14155.34AAA domain-containing protein n=1 Tax=Globisporang... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50800contigH-elongata_contig50800:117..4064 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score617.8
Seed ortholog evalue3.6e-174
Seed eggNOG ortholog2880.D8LK38
Preferred nameYME1
KEGG koko:K08955,ko:K14948,ko:K17796
KEGG TC3.A.8.1
KEGG Pathwayko04139,map04139
GOsGO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005886,GO:0006457,GO:0006508,GO:0006515,GO:0006605,GO:0006626,GO:0006807,GO:0006810,GO:0006839,GO:0006886,GO:0006950,GO:0006996,GO:0007005,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009507,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009628,GO:0009888,GO:0009941,GO:0009987,GO:0010073,GO:0010304,GO:0010467,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017038,GO:0017111,GO:0019538,GO:0019866,GO:0030150,GO:0030163,GO:0031090,GO:0031942,GO:0031966,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034357,GO:0034613,GO:0035694,GO:0042623,GO:0042651,GO:0042802,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045041,GO:0045184,GO:0046907,GO:0048507,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0051603,GO:0051604,GO:0051641,GO:0051649,GO:0055035,GO:0055085,GO:0065002,GO:0070011,GO:0070585,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072655,GO:0098796,GO:0098798,GO:0098800,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1990542
EggNOG free text desc.ATP-dependent peptidase activity
EggNOG OGsCOG0465@1,KOG0734@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko02000,ko03029,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionYme1 homolog, mitochondrial inner membrane i-AAA protease
Ec32 orthologEc-06_008050.1
Exons8
Model size1254
Cds size1254
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50800.12335.1prot_H-elongata_contig50800.12335.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig50800 117..4064 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930833.9514055-CDS-H-elongata_contig50800:116..2691622930833.9514055-CDS-H-elongata_contig50800:116..269Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 117..269 +
1691679590.3189654-CDS-H-elongata_contig50800:116..2691691679590.3189654-CDS-H-elongata_contig50800:116..269Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 117..269 +
1622930833.9765487-CDS-H-elongata_contig50800:779..9411622930833.9765487-CDS-H-elongata_contig50800:779..941Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 780..941 +
1691679590.33003-CDS-H-elongata_contig50800:779..9411691679590.33003-CDS-H-elongata_contig50800:779..941Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 780..941 +
1622930833.9938514-CDS-H-elongata_contig50800:1365..15271622930833.9938514-CDS-H-elongata_contig50800:1365..1527Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 1366..1527 +
1691679590.341207-CDS-H-elongata_contig50800:1365..15271691679590.341207-CDS-H-elongata_contig50800:1365..1527Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 1366..1527 +
1622930834.008906-CDS-H-elongata_contig50800:1724..18361622930834.008906-CDS-H-elongata_contig50800:1724..1836Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 1725..1836 +
1691679590.3495433-CDS-H-elongata_contig50800:1724..18361691679590.3495433-CDS-H-elongata_contig50800:1724..1836Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 1725..1836 +
1622930834.0227342-CDS-H-elongata_contig50800:2261..23651622930834.0227342-CDS-H-elongata_contig50800:2261..2365Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 2262..2365 +
1691679590.3595605-CDS-H-elongata_contig50800:2261..23651691679590.3595605-CDS-H-elongata_contig50800:2261..2365Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 2262..2365 +
1622930834.0376635-CDS-H-elongata_contig50800:2576..27051622930834.0376635-CDS-H-elongata_contig50800:2576..2705Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 2577..2705 +
1691679590.3674912-CDS-H-elongata_contig50800:2576..27051691679590.3674912-CDS-H-elongata_contig50800:2576..2705Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 2577..2705 +
1622930834.0583475-CDS-H-elongata_contig50800:3243..35131622930834.0583475-CDS-H-elongata_contig50800:3243..3513Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 3244..3513 +
1691679590.3750532-CDS-H-elongata_contig50800:3243..35131691679590.3750532-CDS-H-elongata_contig50800:3243..3513Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 3244..3513 +
1622930834.0776825-CDS-H-elongata_contig50800:3902..40641622930834.0776825-CDS-H-elongata_contig50800:3902..4064Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 3903..4064 +
1691679590.3829932-CDS-H-elongata_contig50800:3902..40641691679590.3829932-CDS-H-elongata_contig50800:3902..4064Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50800 3903..4064 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig50800.12335.1

>prot_H-elongata_contig50800.12335.1 ID=prot_H-elongata_contig50800.12335.1|Name=mRNA_H-elongata_contig50800.12335.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=418bp
QAEFFIPLAEKYPEQAMSRFESGQFPVNVAIKEAYLKAAAAVGRTNQVDM
QAVLARPEASGHVASAPGFGGIHPRNVVSAGPKGAPGSYGEPLHVTVSDM
GWKNNMFKLLRFVVAAFFIATVVSSFLDLSLGSKLMPASSVHMAETSDKT
FEDVVGIDEAKAELEEIVLYLKNPTVFTRLGGKLPQGLMLTGPPGTGKTL
LARAIAGEAGVPFYYSSGSEFEEMFVGVGAKRVRDLFAAAKKSSPCIIFI
DEIDAIGASRQLRESSAMKMTLNQLLVEMDGFEQNSGIIVIAATNFPETL
DHALMRPGRFDKHVAVPLPDVRGREKILMMYASRTILDAKANLKSLAQGT
PGFSGADLYNLVNQAAVKASLDGAKAVTTEALEWAKDKILMGAERRSAVI
DKETAKCTAFHEGGHAIV
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mRNA from alignment at H-elongata_contig50800:117..4064+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig50800.12335.1 ID=mRNA_H-elongata_contig50800.12335.1|Name=mRNA_H-elongata_contig50800.12335.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3948bp|location=Sequence derived from alignment at H-elongata_contig50800:117..4064+ (Himanthalia elongata Himel1 dioecious)
CAGGCTGAATTCTTCATCCCCCTGGCGGAGAAATACCCAGAACAAGCGAT GAGCCGCTTTGAGTCGGGGCAGTTTCCGGTCAACGTCGCCATTAAAGAGG CGTACTTGAAGGCAGCTGCGGCGGTTGGACGAACGAATCAAGTCGATATG CAGGTCAGAGACGATACCAAACGTGGCTTTTATTACCTATATACAGTATA CAACAGTAATAAGAGTATTACCTAGACGTGTTAATGTAGTGTATAGTAAT ACTAGTATTAATAGCACGATCGTGTGTTCCTATCGCCCCCTCAAATGGGA CGAAGGCAAGCGCACAATATACTGGAGGGGAGGGGTGAGACTGTGGCCAA GCTCGTTCGATACGGTACATGATCCGCCATGAGATAGATGTATTTGAAGC ATCCCGAGGCCTAGCGTGATTTGCCGCAGTCAAGTCCACACGAACGGCAT ATATGGCTGTTCAGCGATCTTCTCAATTCAGCCCCTTTTGAAAACAGAAG AGTTGTAAACAAACAACCCCGCCGGCCTTTTCGGGTATATACTGTATATA TGTTGAGTTTAATACCACTGGCGTCCATGCCCACCGCTTCTAACTAATGT TACCACTGTCACTGGACAATCCAATCCAATCCAATCCAATCGGGGAAACA AAACAAAACACAGGCGGTGCTGGCGAGGCCAGAAGCCTCGGGCCACGTTG CAAGCGCGCCGGGTTTCGGGGGAATACATCCCAGAAATGTCGTCAGCGCG GGTCCGAAGGGGGCACCGGGCAGCTACGGCGAGCCTCTGCATGTGACTGT CAGCGACATGGGATGGAAAAACAACGTGCGTGCTAGATTTTAATGTAACA CTTACGTAACCGGCAGGATAAATCATTTGATGAAGATAAGGTCGGGGGGG GAGAGGGGAACTGGGGCGGGATAAGCAGGTCAAGACTTGGGGGCGATGTG TACAATCGATAACCTCGACCGGAATGCGGCTTGTAACGTAGAGCTAGCCG CTACCGCCGGAATGATCTGGGATTGTTAATAACGAGGCTATTTTTCGGGT GCACGATGGGGTGTTGCTGATCCCACACGTCTTCCTATAAGAGAAACAAA TATATCCGCGTTGGGAATGGTGTGTCGATTTCGGTTTAAATTTTCCTGGA CAGGCATTCGACGATTACCCTTTTACCGTAGCTTTTTCAGGCACTGACAC CTCCTTGTGCTGCCCTCCTGATTCTGGTCCTGGTTCGGGTCGCTCGCAGA TGTTCAAGCTGTTGCGATTCGTGGTAGCGGCGTTTTTCATCGCAACGGTC GTCTCTAGCTTCCTCGACCTTTCGTTGGGGTCCAAGCTGATGCCGGCTAG CTCCGTGCACATGGCCGAGACTAGCGACAAGACCTTTGAGGACGTGGTCG GCATCGATGAGGTTAGTGCGCCACCTTGGCCTTGTGTAGGCTGGGGAAAG AGCGACGGCGTAAAAAAATGAGGTTGAAGGGCGTCGATCTTTCCTCGAGT CCCTCAACAGCCACAGCCACAAAATCACAAATACCTTTCTTTCGAGCGTG ATTTTTTTTTAAATTATTATTAAGAGTTCGAACCGTCCGAAATCGTCACA CACTGCAGGCAAAGGCCGAGCTGGAAGAGATCGTGTTGTATCTTAAGAAT CCCACTGTCTTCACGCGACTCGGAGGCAAGCTGCCCCAGGGACTAATGTT GACTGGACCTCCTGGAACCGGTGAGCCAGACATGGACTGGACTAATGAAC CGAACTAGTAATATAAATAAGAGTAACATAAAAACATTTCTCCGTTTCCC TAAGTCCTGTAACTGTACGGTCGTGTTTAATATAGTGCACCAGTACCTCA CCCTCACACTCAGTACCTCACGGTATAACCCCCCCCAAAAAAGAAAATTG TCATGAACTATTTATGGTCCCCTGGACTGCACCTCTTATAAAGATAAGAA GGCATGGATGTCCGAAGGGTTCTATAATAATGAATTTGTACGTTTTTCTT ATTTTATTTTATTTTATTTTATTAGTTCAACCTCCCTGATTTTGATTCTT ACGGCTGATCTTGAGTATAGTAAGGTATACGTAGTATTATATTTAATTTT GGAACTCGTTCGTCCGTGCGTGTGTTTTCTTCTCTCTCTTTTCAGGTAAA ACTCTTCTAGCTAGGGCCATCGCGGGAGAGGCTGGCGTTCCGTTTTACTA CTCCTCGGGGTCGGAGTTTGAAGAGATGTTCGTCGGCGTGGGAGCCAAGG TATGCGGAGCAAAGACACTGTTAGGTTTGACTGCGAGGGCACTGATGCAT GCATCCATCAGGATTTCGAGCCATAGTTTTAATTCCATCCATTTCATCTA TCCCCCATTATGAACCTCTCTAACCTACTCTTAATTTTTCTCTCTGTTTT TGTCGCGCGCCCGATAACACATATCCCCGTGATTGACCTGGTATTCTGTG GCACCTAAAGAGGGTCCGCGACTTGTTCGCCGCGGCGAAGAAGTCCTCCC CCTGCATCATCTTTATCGACGAAATCGATGCGATCGGGGCATCTCGACAA TTACGCGAGAGTTCCGCCATGAAGATGACCCTCAATCAGGTACTAATATT AACATTAACCCCTATGGAACTCGATCTGTTTTTTTACATACTAAATTCGA TACAAAACTTGAAATCCAGTTCCGAAAGGGTTAATATAGTATCCCTGCGT TTGACGATAATATACGATATAGTGCGATCTAAATGTTTCGATAATCCGTC ATTATGGACACGTTATGATACGCGCAGAACCTTCGGGGTTGTTACTAACA GTTCTGAGTTAACGTCGACCTGTTGTTACCGTCGTGTACGAGCTTTGATC CTCGTCCGTCAGTCTGTTGGTCCTTGAATCTTGTTGTTGCCGTTTCGAAA AGAGCAGAGACCTCATGGCCAACTCGTTACTGTGTTGATCTCCTGAGTGT GTCGCTGTCTCTCTCTCTCTTAGGTAATTGCTTTGTGAAATATTATTTTC GCTACAGTATCGTTATTATGGAACTCCTGAAACTGTCCGGACTGTTCTGA CACGTAGGATTTCTGACCGCATCCCGCATATGTTATGATGCTTGCGTGAT ATTTGCTGCATCGTTTCTTTGTGGCAGCTGCTGGTTGAGATGGACGGATT CGAGCAAAACAGCGGCATCATCGTCATCGCCGCTACCAACTTTCCGGAAA CTTTGGACCACGCCCTCATGCGCCCAGGCCGCTTCGACAAGCACGTAGCC GTCCCGCTGCCGGACGTGAGGGGTCGCGAGAAGATCTTGATGATGTACGC GTCGCGCACGATCCTCGATGCCAAGGCAAACCTGAAATCTCTCGCCCAGG GAACTCCGGGCTTCTCGGGCGCAGATTTGTACAACCTCGTTAACCAGGTA AGCGAAGAAGATGGAAACAGGCTCTCGACAACAAGGGGCAGAAATGTAAA TATTGGCGAGGGTAGTGACGACGGATTTTTTTTTAATCGATTTGTTTTGG CTCGAGTATCTATCGATGTGTGAGAATCAAATGAAAAATATTGGATTCGC TGTTGCTCGAAAGAGGTATACATTTTTGTTTTTGTTTTTGTTTTTTAGGT GAAATGGGATGTCTCTATTCTGAAGGGGAAATGGGGCGGTTTTCGAGCGT AGCGGAGTTTTTTTTCATACATCGCGCGGAGAAGGGCATCGTATTATCGA CGTGTTGCTGTCGTAGGAAGCCTTCTTGAAGCTTCTTGCGTGGCCCATGA CTAAATACCTGTTTATTGTAATGACCATTGCCACAGGCAGCGGTAAAGGC AAGTCTGGACGGCGCTAAAGCAGTGACGACCGAGGCGCTCGAGTGGGCCA AGGACAAGATTTTAATGGGCGCGGAGCGACGATCGGCGGTGATCGACAAG GAGACCGCGAAGTGCACCGCCTTCCACGAGGGGGGACACGCCATTGTG
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Coding sequence (CDS) from alignment at H-elongata_contig50800:117..4064+

>mRNA_H-elongata_contig50800.12335.1 ID=mRNA_H-elongata_contig50800.12335.1|Name=mRNA_H-elongata_contig50800.12335.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2508bp|location=Sequence derived from alignment at H-elongata_contig50800:117..4064+ (Himanthalia elongata Himel1 dioecious)
CAGGCTGAATTCTTCATCCCCCTGGCGGAGAAATACCCAGAACAAGCGAT
GAGCCGCTTTGAGTCGGGGCAGTTTCCGGTCAACGTCGCCATTAAAGAGG
CGTACTTGAAGGCAGCTGCGGCGGTTGGACGAACGAATCAAGTCGATATG
CAGCAGGCTGAATTCTTCATCCCCCTGGCGGAGAAATACCCAGAACAAGC
GATGAGCCGCTTTGAGTCGGGGCAGTTTCCGGTCAACGTCGCCATTAAAG
AGGCGTACTTGAAGGCAGCTGCGGCGGTTGGACGAACGAATCAAGTCGAT
ATGCAGGCGGTGCTGGCGAGGCCAGAAGCCTCGGGCCACGTTGCAAGCGC
GCCGGGTTTCGGGGGAATACATCCCAGAAATGTCGTCAGCGCGGGTCCGA
AGGGGGCACCGGGCAGCTACGGCGAGCCTCTGCATGTGACTGTCAGCGAC
ATGGGATGGAAAAACAACGCGGTGCTGGCGAGGCCAGAAGCCTCGGGCCA
CGTTGCAAGCGCGCCGGGTTTCGGGGGAATACATCCCAGAAATGTCGTCA
GCGCGGGTCCGAAGGGGGCACCGGGCAGCTACGGCGAGCCTCTGCATGTG
ACTGTCAGCGACATGGGATGGAAAAACAACATGTTCAAGCTGTTGCGATT
CGTGGTAGCGGCGTTTTTCATCGCAACGGTCGTCTCTAGCTTCCTCGACC
TTTCGTTGGGGTCCAAGCTGATGCCGGCTAGCTCCGTGCACATGGCCGAG
ACTAGCGACAAGACCTTTGAGGACGTGGTCGGCATCGATGAGATGTTCAA
GCTGTTGCGATTCGTGGTAGCGGCGTTTTTCATCGCAACGGTCGTCTCTA
GCTTCCTCGACCTTTCGTTGGGGTCCAAGCTGATGCCGGCTAGCTCCGTG
CACATGGCCGAGACTAGCGACAAGACCTTTGAGGACGTGGTCGGCATCGA
TGAGGCAAAGGCCGAGCTGGAAGAGATCGTGTTGTATCTTAAGAATCCCA
CTGTCTTCACGCGACTCGGAGGCAAGCTGCCCCAGGGACTAATGTTGACT
GGACCTCCTGGAACCGGCAAAGGCCGAGCTGGAAGAGATCGTGTTGTATC
TTAAGAATCCCACTGTCTTCACGCGACTCGGAGGCAAGCTGCCCCAGGGA
CTAATGTTGACTGGACCTCCTGGAACCGGTAAAACTCTTCTAGCTAGGGC
CATCGCGGGAGAGGCTGGCGTTCCGTTTTACTACTCCTCGGGGTCGGAGT
TTGAAGAGATGTTCGTCGGCGTGGGAGCCAAGGTAAAACTCTTCTAGCTA
GGGCCATCGCGGGAGAGGCTGGCGTTCCGTTTTACTACTCCTCGGGGTCG
GAGTTTGAAGAGATGTTCGTCGGCGTGGGAGCCAAGAGGGTCCGCGACTT
GTTCGCCGCGGCGAAGAAGTCCTCCCCCTGCATCATCTTTATCGACGAAA
TCGATGCGATCGGGGCATCTCGACAATTACGCGAGAGTTCCGCCATGAAG
ATGACCCTCAATCAGAGGGTCCGCGACTTGTTCGCCGCGGCGAAGAAGTC
CTCCCCCTGCATCATCTTTATCGACGAAATCGATGCGATCGGGGCATCTC
GACAATTACGCGAGAGTTCCGCCATGAAGATGACCCTCAATCAGCTGCTG
GTTGAGATGGACGGATTCGAGCAAAACAGCGGCATCATCGTCATCGCCGC
TACCAACTTTCCGGAAACTTTGGACCACGCCCTCATGCGCCCAGGCCGCT
TCGACAAGCACGTAGCCGTCCCGCTGCCGGACGTGAGGGGTCGCGAGAAG
ATCTTGATGATGTACGCGTCGCGCACGATCCTCGATGCCAAGGCAAACCT
GAAATCTCTCGCCCAGGGAACTCCGGGCTTCTCGGGCGCAGATTTGTACA
ACCTCGTTAACCAGCTGCTGGTTGAGATGGACGGATTCGAGCAAAACAGC
GGCATCATCGTCATCGCCGCTACCAACTTTCCGGAAACTTTGGACCACGC
CCTCATGCGCCCAGGCCGCTTCGACAAGCACGTAGCCGTCCCGCTGCCGG
ACGTGAGGGGTCGCGAGAAGATCTTGATGATGTACGCGTCGCGCACGATC
CTCGATGCCAAGGCAAACCTGAAATCTCTCGCCCAGGGAACTCCGGGCTT
CTCGGGCGCAGATTTGTACAACCTCGTTAACCAGGCAGCGGTAAAGGCAA
GTCTGGACGGCGCTAAAGCAGTGACGACCGAGGCGCTCGAGTGGGCCAAG
GACAAGATTTTAATGGGCGCGGAGCGACGATCGGCGGTGATCGACAAGGA
GACCGCGAAGTGCACCGCCTTCCACGAGGGGGGACACGCCATTGTGGCAG
CGGTAAAGGCAAGTCTGGACGGCGCTAAAGCAGTGACGACCGAGGCGCTC
GAGTGGGCCAAGGACAAGATTTTAATGGGCGCGGAGCGACGATCGGCGGT
GATCGACAAGGAGACCGCGAAGTGCACCGCCTTCCACGAGGGGGGACACG
CCATTGTG
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