mRNA_H-elongata_contig50664.12315.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig50664.12315.1
Unique NamemRNA_H-elongata_contig50664.12315.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig50664.12315.1 vs. uniprot
Match: D8LTY1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTY1_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 3.840e-101
Identity = 146/189 (77.25%), Postives = 162/189 (85.71%), Query Frame = 1
Query:   34 QVQGHGSRLMNELKLVAIRDDISHFHTYADNYAIGYFAKHGFTKNLTMSRDRWYLYVKDYDGGTHMECYVHPTVPYMHQAEMFRKQRDFLVNRIADVSTSTRVYPGLTDADFAELKHHLDIPGVKEAGWTEDELNAQNRRKSDRDALATNKELLAIWREIERHDQAWPFREPVDPVEVPDYYKMVARPI 600
            QVQG+GSRLMNELK+VAIR+D+SHFHTYADNYAIGYFAKHGFTKNLTMSRDRW+ YVKDYDGGTHMECYVHPTVPYM QAEMF  Q  FL  RIAD+S+S  V+PGL++  F  L+HH+DIPGV EAGWT DELNAQNRRK D DALA NKELLAIWRE+E+HD AW FREPVD  EV DY  ++ RPI
Sbjct:  163 QVQGYGSRLMNELKMVAIREDLSHFHTYADNYAIGYFAKHGFTKNLTMSRDRWFNYVKDYDGGTHMECYVHPTVPYMKQAEMFEIQSQFLRERIADISSSKVVHPGLSEEAFHSLEHHIDIPGVAEAGWTMDELNAQNRRKRDGDALAVNKELLAIWRELEKHDVAWVFREPVDLTEVTDYTSIIERPI 351          
BLAST of mRNA_H-elongata_contig50664.12315.1 vs. uniprot
Match: A0A835ZI58_9STRA (Histone acetyltransferase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI58_9STRA)

HSP 1 Score: 182 bits (462), Expect = 2.340e-53
Identity = 94/204 (46.08%), Postives = 133/204 (65.20%), Query Frame = 1
Query:   31 QQVQGHGSRLMNELKLVAIRDDISHFHTYADNYAIGYFAKHGFTKNLTMSRDRWYLYVKDYDGGTHMECYVHPTVPYMHQAEMFRKQRDFLVNRIADVSTST--RVYPGLTDADFAELKHHL-DIPGVKEAGWTEDELNAQNRRKSDRD-----------ALATNKELLAIWREIERHDQAWPFREPVDPVEVPDYYKMVARPI 600
            +QVQGHG+RLMN LK  A+ ++I+HF TYADN+AIGYF K GFTK+++M R+RW+ Y+K YDGGT MECYVHP++PY     M + Q ++++NR      +   + YPG +   ++ +K  L DIPG+K+AGWTE EL A +R K DR            A+   ++LL +W ++   + AWPF EPVD   V DY +++  PI
Sbjct:   69 EQVQGHGTRLMNHLKQYALGENITHFLTYADNFAIGYFKKQGFTKSISMPRERWHGYIKHYDGGTLMECYVHPSIPYTRVPHMLQAQLEYVINRYRHKGEAAIFKAYPG-SQVPYSNVKDLLQDIPGLKDAGWTE-ELIAGDRSKGDRQRASKAQAAAAAAVLLKQDLLMLWNKVSASNWAWPFYEPVDTGIVTDYLEVIKEPI 270          
BLAST of mRNA_H-elongata_contig50664.12315.1 vs. uniprot
Match: A0A7S1B7L5_9STRA (Histone acetyltransferase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B7L5_9STRA)

HSP 1 Score: 174 bits (442), Expect = 6.500e-50
Identity = 97/201 (48.26%), Postives = 126/201 (62.69%), Query Frame = 1
Query:   31 QQVQGHGSRLMNELKLVAIRDDISHFHTYADNYAIGYFAKHGFTKNLTMSRDRWYLYVKDYDGGTHMECYVHPTVPYMHQAEMFRKQRDFLVNRIADVSTSTRVYPGLTDADF---------AELKHHLDIPGVKEAGWTEDELNAQ--NRRKSDRDALATNKELLAIWREIERHDQAWPFREPVDPVEVPDYYKMVARPI 600
            +QV+G+G++LMN LK  A+R++I +  TYADNYAIGYF K GFTK ++M + R+   +KDYDGGT MECYVHP+V +    EM R QR FL +R+  +S S  VYP L DA                 L IPGVKEA WT  +L A     R +DR   +   ELL + R+IE  + AWPFR+PVD  EVPDY +++  PI
Sbjct:  111 EQVKGYGTKLMNLLKTQAVRENIEYLITYADNYAIGYFKKQGFTKAISMPKGRYLGLIKDYDGGTMMECYVHPSVDFARVPEMLRYQRAFLEDRLRRISRSHVVYPPLRDAATYLAGASRGQEAAARLLQIPGVKEANWTLADLVASLGANRDADRARTSLRTELLQVVRKIEDQNFAWPFRQPVDTSEVPDYLEIIKDPI 311          
BLAST of mRNA_H-elongata_contig50664.12315.1 vs. uniprot
Match: K0RT38_THAOC (Histone acetyltransferase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RT38_THAOC)

HSP 1 Score: 174 bits (440), Expect = 6.470e-49
Identity = 97/202 (48.02%), Postives = 129/202 (63.86%), Query Frame = 1
Query:   31 QQVQGHGSRLMNELKLVAIRDDISHFHTYADNYAIGYFAKHGFTKNLTMSRDRWYLYVKDYDGGTHMECYVHPTVPYMHQAEMFRKQRDFLVNRIADVSTSTRV-YPGLTDADFAE---------LKHHLDIPGVKEAGWTEDELNAQNRRKSDRDAL--ATNKELLAIWREIERHDQAWPFREPVDPVEVPDYYKMVARPI 600
            QQV+G+G++LMN LK+ A+ + I +F TYADNYAIGYF K GFTK+L M + R++ Y+KDYDGGT MECY+HP++ Y+   E+   QR+F++ RI  +S S +V YP L  A FA+         +   L IPGV EAGWT  +L A  RR  D D    A   ELLAI  ++     AW FR+PVD  EV DY  +++ PI
Sbjct:  177 QQVKGYGTKLMNLLKMHAVGEGIEYFITYADNYAIGYFKKQGFTKSLQMHKSRYHGYIKDYDGGTVMECYIHPSIDYLRIPEVVAAQREFILQRIRHLSKSDKVKYPALP-AGFADRHVSGRNRDVARALAIPGVIEAGWTHRDLLASTRRAKDADQRKSALRAELLAIVSKVSEQQFAWCFRDPVDTDEVADYLDVISDPI 377          
BLAST of mRNA_H-elongata_contig50664.12315.1 vs. uniprot
Match: G4ZDD7_PHYSP (Histone acetyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=G4ZDD7_PHYSP)

HSP 1 Score: 169 bits (427), Expect = 1.320e-48
Identity = 86/189 (45.50%), Postives = 113/189 (59.79%), Query Frame = 1
Query:   34 QVQGHGSRLMNELKLVAIRDDISHFHTYADNYAIGYFAKHGFTKNLTMSRDRWYLYVKDYDGGTHMECYVHPTVPYMHQAEMFRKQRDFLVNRIADVSTSTRVYPGLTDADFAELKHHLDIPGVKEAGWTEDELNAQNRRKSDRDALATNKELLAIWREIERHDQAWPFREPVDPVEVPDYYKMVARPI 600
            QV+G+G+RLMN LK      +I+HF TYADNYAIGYF K GFTK+++M+R  WY Y+KDYDGGT MEC +H  + Y+    M   QR+ +  +I + S S  VYPGLT      L     +PGVKEAGW++     +N R   RD  +   +L  + + +  H  AWPF EPVD   V DY   +  PI
Sbjct:   37 QVKGYGTRLMNHLKEYVKTKNITHFLTYADNYAIGYFKKQGFTKSVSMARPNWYGYIKDYDGGTLMECTIHTQINYLRITSMIHMQREAIQKKIKERSRSQNVYPGLTKFAEGRLMDIYMVPGVKEAGWSQ--ATIRNNRIGTRDQGSLKSQLSQLLKAVSSHRSAWPFHEPVDTSVVVDYLDHIKEPI 223          
BLAST of mRNA_H-elongata_contig50664.12315.1 vs. uniprot
Match: B5Y469_PHATC (Histone acetyltransferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y469_PHATC)

HSP 1 Score: 169 bits (428), Expect = 3.730e-48
Identity = 88/192 (45.83%), Postives = 123/192 (64.06%), Query Frame = 1
Query:   34 QVQGHGSRLMNELKLVAIRDDISHFHTYADNYAIGYFAKHGFTKNLTMSRDRWYLYVKDYDGGTHMECYVHPTVPYMHQAEMFRKQRDFLVNRIADVSTSTRVYPGLT-DADFAELKHHLDIPGVKEAGWTEDELNAQNR--RKSDRDALATNKELLAIWREIERHDQAWPFREPVDPVEVPDYYKMVARPI 600
            QV+G+G++LMN LK +     I +F TYADNYAIGYF K GF KN++M + R++  +KDYDGGT MECYVHP++ +    EM + QR+F++ +++ V+ S  VY  L+           L IPG+ +AGWT  +L   +   +++DR   A    LLA+ R+IE    AWPFREPVD  EVPDY ++V  PI
Sbjct:   92 QVKGYGTKLMNLLKKIGAETGIEYFITYADNYAIGYFKKQGFAKNISMPKGRYFGLIKDYDGGTPMECYVHPSIDFTRVPEMLQAQRNFILAQVSRVAKSRIVYEPLSLSRSNQAAARALAIPGIAQAGWTLADLTTASGQGKEADRQKSALKTTLLAMLRKIEEQQFAWPFREPVDLTEVPDYLQVVTTPI 283          
BLAST of mRNA_H-elongata_contig50664.12315.1 vs. uniprot
Match: W7TL82_9STRA (Histone acetyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL82_9STRA)

HSP 1 Score: 172 bits (437), Expect = 9.660e-48
Identity = 93/200 (46.50%), Postives = 124/200 (62.00%), Query Frame = 1
Query:   31 QQVQGHGSRLMNELKLVAIRDDISHFHTYADNYAIGYFAKHGFTKNLTMSRDRWYLYVKDYDGGTHMECYVHPTVPYMHQAEMFRKQRDFLVNRIADVSTSTRVYPGLTDADFAELKHH----------LDIPGVKEAGWTEDELNAQNRRKSDRDALATNKELLAIWREIERHDQAWPFREPVDPVEVPDYYKMVARPI 600
            +QV+G+G+RLMN LK  A R+ + +F TYADNYAIGYF K GF+K L M R +W  Y+KDYDG   MECYVHPT+ Y+   ++  +QR ++ +R+   S S  +YPGL  A F  LK            +++PG+KEAGW   E    ++R +DR+  A    L  I RE+  H  AWPF EPVD  EVPDY  +V+ PI
Sbjct:  246 EQVKGYGTRLMNHLKEQAKREGLRYFLTYADNYAIGYFRKQGFSKTLGMPRAQWMGYIKDYDGAHLMECYVHPTINYLDVPDIIARQRAYIHSRLKVKSKSHVIYPGL--ACFKALKEGGKEGGRVRDVMEVPGIKEAGWNLRESGPVSQRDTDRERAALQLFLNGILREVYNHRAAWPFVEPVDTSEVPDYLDVVSDPI 443          
BLAST of mRNA_H-elongata_contig50664.12315.1 vs. uniprot
Match: W4G526_9STRA (Histone acetyltransferase n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G526_9STRA)

HSP 1 Score: 172 bits (436), Expect = 2.930e-47
Identity = 85/190 (44.74%), Postives = 121/190 (63.68%), Query Frame = 1
Query:   31 QQVQGHGSRLMNELKLVAIRDDISHFHTYADNYAIGYFAKHGFTKNLTMSRDRWYLYVKDYDGGTHMECYVHPTVPYMHQAEMFRKQRDFLVNRIADVSTSTRVYPGLTDADFAELKHHLDIPGVKEAGWTEDELNAQNRRKSDRDALATNKELLAIWREIERHDQAWPFREPVDPVEVPDYYKMVARPI 600
            +QV+G+G+RLMN LK       ++HF TYADNYAIGYF K GF+K ++M+R  W+ Y+KDYDGGT MEC +HP + Y++   M   QR  LV+ I   S +  VYPGLT    A L +   +PGVKEAGW++  +      +++RD+ +  ++L ++W+    H  AWPF EPVD   V DY +++  PI
Sbjct:  316 EQVKGYGTRLMNHLKEFVKTQHLTHFLTYADNYAIGYFKKQGFSKVVSMARPNWFGYIKDYDGGTLMECQIHPHINYLNITAMVHAQRAMLVDEIQKRSKAAIVYPGLTTFCDARLVNIHAVPGVKEAGWSQTLIRTS---RTNRDSSSLKQQLQSMWKSFSNHRSAWPFHEPVDVTVVTDYLEIIQCPI 502          
BLAST of mRNA_H-elongata_contig50664.12315.1 vs. uniprot
Match: M4B2H9_HYAAE (Histone acetyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2H9_HYAAE)

HSP 1 Score: 171 bits (433), Expect = 3.140e-46
Identity = 86/189 (45.50%), Postives = 116/189 (61.38%), Query Frame = 1
Query:   34 QVQGHGSRLMNELKLVAIRDDISHFHTYADNYAIGYFAKHGFTKNLTMSRDRWYLYVKDYDGGTHMECYVHPTVPYMHQAEMFRKQRDFLVNRIADVSTSTRVYPGLTDADFAELKHHLDIPGVKEAGWTEDELNAQNRRKSDRDALATNKELLAIWREIERHDQAWPFREPVDPVEVPDYYKMVARPI 600
            QV+G+G+RLMN LK      +I+HF TYADNYAIGYF K GFTK+++M+R  WY Y+KDYDGGT MEC +H  + Y+    M  +QR  +  ++ + S S RVYPGLT      L     +PGVKEAGW++  +  +N R   RD  +   +LL + + +  H  AWPF EPVD   V DY   +  P+
Sbjct:  478 QVKGYGTRLMNHLKEYVKTKNITHFLTYADNYAIGYFKKQGFTKSVSMARPNWYGYIKDYDGGTLMECTIHTQINYLRITSMIHRQRKAIRGKLEERSCSKRVYPGLTQFAEGRLMDIYMVPGVKEAGWSQAVI--RNNRIGTRDQGSLKSQLLQLLKAVFNHRSAWPFHEPVDTTVVVDYLDHIKEPV 664          
BLAST of mRNA_H-elongata_contig50664.12315.1 vs. uniprot
Match: A0A0P1B8E3_PLAHL (Histone acetyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B8E3_PLAHL)

HSP 1 Score: 166 bits (421), Expect = 4.030e-46
Identity = 86/189 (45.50%), Postives = 114/189 (60.32%), Query Frame = 1
Query:   34 QVQGHGSRLMNELKLVAIRDDISHFHTYADNYAIGYFAKHGFTKNLTMSRDRWYLYVKDYDGGTHMECYVHPTVPYMHQAEMFRKQRDFLVNRIADVSTSTRVYPGLTDADFAELKHHLDIPGVKEAGWTEDELNAQNRRKSDRDALATNKELLAIWREIERHDQAWPFREPVDPVEVPDYYKMVARPI 600
            QV+G+G+RLMN LK      +I++F TYADNYAIGYF K GFTKN++M R  WY Y+KDYDGGT MEC +H  + Y+    M  +QR  + ++I + S +  VYPGLT      L     +PGVKEAGW++     +N R   RD  +   +LL + + +  H  AWPF EPVD   V DY   V  P+
Sbjct:  192 QVKGYGTRLMNHLKEYVKIKNITYFLTYADNYAIGYFKKQGFTKNVSMDRPNWYGYIKDYDGGTLMECTIHTQINYLRITSMIHQQRKAIQDKIRERSRAKTVYPGLTMFADGRLMDIYMVPGVKEAGWSQ--ATIRNSRIGTRDQGSLKSQLLQLLKAVSNHRSAWPFHEPVDTSVVVDYLDHVKDPV 378          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50664.12315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTY1_ECTSI3.840e-10177.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZI58_9STRA2.340e-5346.08Histone acetyltransferase n=2 Tax=Tribonema minus ... [more]
A0A7S1B7L5_9STRA6.500e-5048.26Histone acetyltransferase n=2 Tax=Corethron hystri... [more]
K0RT38_THAOC6.470e-4948.02Histone acetyltransferase (Fragment) n=1 Tax=Thala... [more]
G4ZDD7_PHYSP1.320e-4845.50Histone acetyltransferase n=2 Tax=Phytophthora Tax... [more]
B5Y469_PHATC3.730e-4845.83Histone acetyltransferase (Fragment) n=1 Tax=Phaeo... [more]
W7TL82_9STRA9.660e-4846.50Histone acetyltransferase n=2 Tax=Monodopsidaceae ... [more]
W4G526_9STRA2.930e-4744.74Histone acetyltransferase n=10 Tax=Aphanomyces ast... [more]
M4B2H9_HYAAE3.140e-4645.50Histone acetyltransferase n=1 Tax=Hyaloperonospora... [more]
A0A0P1B8E3_PLAHL4.030e-4645.50Histone acetyltransferase n=1 Tax=Plasmopara halst... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50664contigH-elongata_contig50664:1342..3721 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score307.0
Seed ortholog evalue6.5e-81
Seed eggNOG ortholog2880.D8LTY1
Preferred nameHAG1
KEGG koko:K06062
KEGG Pathwayko04330,ko04919,ko05166,ko05203,map04330,map04919,map05166,map05203
GOsGO:0000003,GO:0000123,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004402,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006325,GO:0006355,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0006996,GO:0007275,GO:0008080,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009628,GO:0009653,GO:0009791,GO:0009889,GO:0009891,GO:0009893,GO:0009908,GO:0009987,GO:0010015,GO:0010321,GO:0010468,GO:0010484,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0022414,GO:0022622,GO:0031248,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043543,GO:0043966,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045893,GO:0045935,GO:0048364,GO:0048367,GO:0048518,GO:0048522,GO:0048580,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051239,GO:0051252,GO:0051254,GO:0051276,GO:0060255,GO:0061458,GO:0061733,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090567,GO:0097159,GO:0099402,GO:1901363,GO:1901564,GO:1902493,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1905392,GO:1990234,GO:2000026,GO:2000112,GO:2001141
EggNOG free text desc.histone acetyltransferase activity
EggNOG OGsCOG5076@1,KOG1472@2759
EC2.3.1.48
COG Functional cat.BK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03021,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGCN5-like GNAT family acetyltransferase
Ec32 orthologEc-12_003920.1
Exons3
Model size600
Cds size600
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50664.12315.1prot_H-elongata_contig50664.12315.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig50664 1342..3721 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930832.105998-CDS-H-elongata_contig50664:1341..15411622930832.105998-CDS-H-elongata_contig50664:1341..1541Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50664 1342..1541 -
1691679589.5530913-CDS-H-elongata_contig50664:1341..15411691679589.5530913-CDS-H-elongata_contig50664:1341..1541Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50664 1342..1541 -
1622930832.1243126-CDS-H-elongata_contig50664:1943..21521622930832.1243126-CDS-H-elongata_contig50664:1943..2152Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50664 1944..2152 -
1691679589.5671287-CDS-H-elongata_contig50664:1943..21521691679589.5671287-CDS-H-elongata_contig50664:1943..2152Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50664 1944..2152 -
1622930832.1425753-CDS-H-elongata_contig50664:3530..37211622930832.1425753-CDS-H-elongata_contig50664:3530..3721Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50664 3531..3721 -
1691679589.584182-CDS-H-elongata_contig50664:3530..37211691679589.584182-CDS-H-elongata_contig50664:3530..3721Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50664 3531..3721 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig50664.12315.1

>prot_H-elongata_contig50664.12315.1 ID=prot_H-elongata_contig50664.12315.1|Name=mRNA_H-elongata_contig50664.12315.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=200bp
MRCVRGGGVGQQVQGHGSRLMNELKLVAIRDDISHFHTYADNYAIGYFAK
HGFTKNLTMSRDRWYLYVKDYDGGTHMECYVHPTVPYMHQAEMFRKQRDF
LVNRIADVSTSTRVYPGLTDADFAELKHHLDIPGVKEAGWTEDELNAQNR
RKSDRDALATNKELLAIWREIERHDQAWPFREPVDPVEVPDYYKMVARPI
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mRNA from alignment at H-elongata_contig50664:1342..3721-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig50664.12315.1 ID=mRNA_H-elongata_contig50664.12315.1|Name=mRNA_H-elongata_contig50664.12315.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2380bp|location=Sequence derived from alignment at H-elongata_contig50664:1342..3721- (Himanthalia elongata Himel1 dioecious)
ATGCGGTGTGTACGTGGGGGTGGGGTGGGCCAACAGGTTCAGGGGCACGG CAGTCGTCTCATGAACGAACTGAAGCTGGTCGCCATCCGAGATGACATTT CTCACTTCCACACGTACGCCGACAACTACGCCATCGGCTACTTCGCCAAG CACGGCTTCACGAAGAACCTGACAATGTCGCGCGACCGCTGGTCAGTAAT CACTCTCAGTTTGGGTTTGGATGTCGATGTTGATGGGACGAGGGGACGGA CGGACGCGAGGGTGTACTTGTGCCGTGCCTTAGCTGCTATACCATTGTTC ACGCATTCTTGGAAGGACAGAGCATTAGGAGGGGGGCAGGGGAATCCATG CACTCTTGGCGCGGTGCAAGGAATATTATTACGTGCCACAGAGCATAGGC TACTAAAAAAATAGAGAAAAACATATTTCTAGGGATGGCAGTTCCGTTTC TGTGGCGGAGAACAATAGTGTCTATTTTTGCCAAGGTTTGCCAAGCACGA GTTGAGAGCTTTAGGAACAGCACCATTCGCCCCTCACGTTTTCGCAGAGT GATGAAGAAGCTACAGTCTAATGGTACGCCTTTGGGGGGGGTGCTTTGCA TCGAGCCCCCCTTCCAACACTCTTCTAGCGTTACATCTCGACCGACGGGT GATGAAACCTCGTCTGTCTCGGAAGAATATTTTACCATAATAGGCTCTCA AACGACCATGGCAAACACCAGTACTGCGGTGGCCAGAGTCTCGTCTATTC AGCACTCAACACTCCCCGGCAAGAGCGTGACATCAAGGACCCTCTCTCTT CCGTAAAGATGGTAGGTAGCAGGCAGCGATGGAGTTCAACGGGCACCAGG CGTCGAGGTCGAAGATGGGTGCAACACGGGCTTGGTCGAATCGAAATCGA CGCAGGAAAAGGGCATTGAATTTCATTTTCCTTGTTAACGTTGGTAAAAA AAAATCGAGCCCTCGGGTTACGACCCTAGTACGAAGTAAAGCATAGTACA GTTTTAGCACTCCAGACTACTGAGTATTACAGCATGGGAGAGCGGAAAGG TCAGAAAAAACAAGGCGTGGATGTTCAGAGGGTTTGAATTTGTTTGTTTG TTTTTTTAAGAAAAAAAACAAAATAAACGAAAGTATTTTTTTGCCGCCAG AGATCTAGATCCAACCGGCGTATAAAATCTTGTACTGTAGTATACTGTAC CATACTGTGTTTTACTGTTGCTCCGCTGTTGTAAAATAACGGCGCTCGTC ACATGAGGTATCCAGCATCACCCCTGCGACAGAGACGCTCACTTGAAGAG ATAATTTGGTCGATGAGGAGATCATTTGGTTTTCCTTTCGGTGGACAACT TATTGTGCGCTCATTTCCTGGTGCGAAAGTGGTTGTTGGTAGTAGCAATA CGATAGCCGACCGTGAAGTTGCGTATGTACCAGACCCACCCATCTCTTGC GCTTTCTCGTGATTGGTCAATCTGTAGCAATTCTCCGGAGATCACAACCG TTTGAATGGAAGTACCGTTTTTTATGTCACCGACCAAACATATATATATA TATATATATATAAATGCAGGTATCTCTACGTGAAAGATTACGACGGGGGC ACGCACATGGAGTGCTACGTCCACCCCACGGTACCGTACATGCACCAGGC GGAGATGTTTCGGAAGCAGAGGGATTTCTTGGTCAATCGCATCGCGGACG TGTCCACGAGCACCCGCGTCTACCCGGGATTGACAGATGCCGACTTCGCG GAACTCAAGCACCACCTAGACATTCCGGGTGAGGAAATTATGGTTTAGTT TCATTTTTTCCCGGGCAGGAAATTCTCGTTTGAACTTATATTCCAATCTC CAGAGCCAGTCCCGTCCCGTCCCACGATGTGTTTGTCCCACAGAGTATCC CATCAATGTCCCATTGGCTTCGGGTTTTCGTAAAGGCCCGGGACTGTAGA AGGCGTATGTGCTAATGTGTTCCTACTCGAGTCGTACTTCCACGCTGCGT TTAGTCCGTATTTGCGCTACAGTCTATCTTACAACCATAGCCTTTTTTAC AGAAATACCTCATTAAAAACGACAGAGCGCTGAAAACCAAACGCCTTTGA GTGTCGTGGAAAAAACGGGGAGAAATAATTAATTTCCTGATTATGTTCTC TATTGGCCGCCGGGCGCGGGTTTCCTGTAGGCGTCAAGGAAGCGGGGTGG ACCGAAGACGAGCTCAACGCTCAGAACCGCCGCAAGAGCGACCGTGACGC CCTGGCGACAAACAAGGAGCTGCTGGCGATCTGGAGGGAGATCGAGAGAC ATGATCAAGCGTGGCCGTTCCGGGAGCCCGTAGACCCCGTCGAGGTGCCC GACTACTACAAGATGGTGGCGCGGCCGATC
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Coding sequence (CDS) from alignment at H-elongata_contig50664:1342..3721-

>mRNA_H-elongata_contig50664.12315.1 ID=mRNA_H-elongata_contig50664.12315.1|Name=mRNA_H-elongata_contig50664.12315.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1200bp|location=Sequence derived from alignment at H-elongata_contig50664:1342..3721- (Himanthalia elongata Himel1 dioecious)
ATGCGGTGTGTACGTGGGGGTGGGGTGGGCCAACAGGTTCAGGGGCACGG
CAGTCGTCTCATGAACGAACTGAAGCTGGTCGCCATCCGAGATGACATTT
CTCACTTCCACACGTACGCCGACAACTACGCCATCGGCTACTTCGCCAAG
CACGGCTTCACGAAGAACCTGACAATGTCGCGCGACCGCTGATGCGGTGT
GTACGTGGGGGTGGGGTGGGCCAACAGGTTCAGGGGCACGGCAGTCGTCT
CATGAACGAACTGAAGCTGGTCGCCATCCGAGATGACATTTCTCACTTCC
ACACGTACGCCGACAACTACGCCATCGGCTACTTCGCCAAGCACGGCTTC
ACGAAGAACCTGACAATGTCGCGCGACCGCTGGTATCTCTACGTGAAAGA
TTACGACGGGGGCACGCACATGGAGTGCTACGTCCACCCCACGGTACCGT
ACATGCACCAGGCGGAGATGTTTCGGAAGCAGAGGGATTTCTTGGTCAAT
CGCATCGCGGACGTGTCCACGAGCACCCGCGTCTACCCGGGATTGACAGA
TGCCGACTTCGCGGAACTCAAGCACCACCTAGACATTCCGGGTATCTCTA
CGTGAAAGATTACGACGGGGGCACGCACATGGAGTGCTACGTCCACCCCA
CGGTACCGTACATGCACCAGGCGGAGATGTTTCGGAAGCAGAGGGATTTC
TTGGTCAATCGCATCGCGGACGTGTCCACGAGCACCCGCGTCTACCCGGG
ATTGACAGATGCCGACTTCGCGGAACTCAAGCACCACCTAGACATTCCGG
GCGTCAAGGAAGCGGGGTGGACCGAAGACGAGCTCAACGCTCAGAACCGC
CGCAAGAGCGACCGTGACGCCCTGGCGACAAACAAGGAGCTGCTGGCGAT
CTGGAGGGAGATCGAGAGACATGATCAAGCGTGGCCGTTCCGGGAGCCCG
TAGACCCCGTCGAGGTGCCCGACTACTACAAGATGGTGGCGCGGCCGATC
GCGTCAAGGAAGCGGGGTGGACCGAAGACGAGCTCAACGCTCAGAACCGC
CGCAAGAGCGACCGTGACGCCCTGGCGACAAACAAGGAGCTGCTGGCGAT
CTGGAGGGAGATCGAGAGACATGATCAAGCGTGGCCGTTCCGGGAGCCCG
TAGACCCCGTCGAGGTGCCCGACTACTACAAGATGGTGGCGCGGCCGATC
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