mRNA_H-elongata_contig50631.12311.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig50631.12311.1
Unique NamemRNA_H-elongata_contig50631.12311.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig50631.12311.1 vs. uniprot
Match: A0A6H5JJT8_9PHAE (HSP70 protein n=10 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5JJT8_9PHAE)

HSP 1 Score: 459 bits (1182), Expect = 7.320e-157
Identity = 225/245 (91.84%), Postives = 240/245 (97.96%), Query Frame = 1
Query:    1 MSAVDGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNASNTVFDAKRMIGRRFSDPAVTADRKHWPFSVIEGAGGKPMIEILFKGEKKKFAPEEISSMVLVKMKEIAEAYLGKEVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQ 735
            M+AV+GES+GIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNA+NTVFDAKR+IGRR++DPAV +D+KHWPF V+EG GGKP IE+ FKGEKK+FAPEEISSMVLVKMKEIAEAYLGKEVKNAV+TVPAYFNDSQRQATKDAGSI+GLNVMRIINEPTAAAIAYGLDKKGEE+NVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQ
Sbjct:    1 MAAVEGESIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNATNTVFDAKRLIGRRYTDPAVASDKKHWPFHVVEGPGGKPTIEVSFKGEKKQFAPEEISSMVLVKMKEIAEAYLGKEVKNAVITVPAYFNDSQRQATKDAGSISGLNVMRIINEPTAAAIAYGLDKKGEERNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQ 245          
BLAST of mRNA_H-elongata_contig50631.12311.1 vs. uniprot
Match: A0A6H5KQY2_9PHAE (HSP70 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY2_9PHAE)

HSP 1 Score: 459 bits (1181), Expect = 1.010e-155
Identity = 226/251 (90.04%), Postives = 242/251 (96.41%), Query Frame = 1
Query:    1 MSAVDGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNASNTVFDAKRMIGRRFSDPAVTADRKHWPFSVIEGAGGKPMIEILFKGEKKKFAPEEISSMVLVKMKEIAEAYLGKEVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQVNNRVN 753
            M+AV+GES+GIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNA+NTVFDAKR+IGR+F+DPAV +D+KHWPFSV+ G GGKP IE+ FKGEKK+FAPEEISSMVLVKMKEIAEAYLGKEVKNAV+TVPAYFNDSQRQATKDAGSI+GLNVMRIINEPTAAAIAYGLDKKG+E+NVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQ   R N
Sbjct:    1 MAAVEGESIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNATNTVFDAKRLIGRKFTDPAVASDKKHWPFSVVAGPGGKPTIEVSFKGEKKQFAPEEISSMVLVKMKEIAEAYLGKEVKNAVITVPAYFNDSQRQATKDAGSISGLNVMRIINEPTAAAIAYGLDKKGQERNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKN 251          
BLAST of mRNA_H-elongata_contig50631.12311.1 vs. uniprot
Match: A0A835Z7M3_9STRA (Heat shock protein 70 n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M3_9STRA)

HSP 1 Score: 442 bits (1137), Expect = 5.690e-150
Identity = 218/245 (88.98%), Postives = 233/245 (95.10%), Query Frame = 1
Query:    1 MSAVDGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNASNTVFDAKRMIGRRFSDPAVTADRKHWPFSVIEGAGGKPMIEILFKGEKKKFAPEEISSMVLVKMKEIAEAYLGKEVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQ 735
            MSAV GE+VGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNASNTVFDAKR+IGRRFSDPAV  D KHWPF V  G G KP+I++ F+GE+K FAPEEIS+MVLVKMKEIAEAYLGKEVKNAV+TVPAYFNDSQRQATKDAG+I+GLNVMRIINEPTAAAIAYGLDKKG E+N+LIFDLGGGTFDVS+LTIEEGIFEVKATAGDTHLGGEDFDNRMVDYF+Q
Sbjct:    1 MSAVSGETVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNASNTVFDAKRLIGRRFSDPAVQQDMKHWPFKVERGPGEKPLIKVHFRGEEKTFAPEEISAMVLVKMKEIAEAYLGKEVKNAVITVPAYFNDSQRQATKDAGAISGLNVMRIINEPTAAAIAYGLDKKGRERNILIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFVQ 245          
BLAST of mRNA_H-elongata_contig50631.12311.1 vs. uniprot
Match: A0A7S3Y1R9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1R9_HETAK)

HSP 1 Score: 429 bits (1103), Expect = 2.360e-149
Identity = 210/243 (86.42%), Postives = 228/243 (93.83%), Query Frame = 1
Query:    4 SAVDGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNASNTVFDAKRMIGRRFSDPAVTADRKHWPFSVIEGAGGKPMIEILFKGEKKKFAPEEISSMVLVKMKEIAEAYLGKEVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFL 732
            + V GES+GIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGD+AKNQVAMNASNTVFDAKR IGR++ DPA   D KH PF++I G GGKPMI++ FKGE K+FAPEEISSMVLVKMKEIAEAYLGK VKNAV+TVPAYFNDSQRQATKDAG+IAGLNV+RIINEPTAAAIAYGLDKKG EKNVLIFDLGGGTFDVS+L+IEEGIFEVKATAGDTHLGGEDFDNR+VD+F+
Sbjct:   28 ATVTGESIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDSAKNQVAMNASNTVFDAKRFIGRKYDDPATQEDMKHLPFTIINGKGGKPMIQVQFKGETKQFAPEEISSMVLVKMKEIAEAYLGKNVKNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKGREKNVLIFDLGGGTFDVSLLSIEEGIFEVKATAGDTHLGGEDFDNRLVDHFM 270          
BLAST of mRNA_H-elongata_contig50631.12311.1 vs. uniprot
Match: H6WB83_VAULI (Heat shock protein 70 n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB83_VAULI)

HSP 1 Score: 438 bits (1126), Expect = 2.050e-148
Identity = 216/243 (88.89%), Postives = 233/243 (95.88%), Query Frame = 1
Query:    1 MSAVDGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNASNTVFDAKRMIGRRFSDPAVTADRKHWPFSVIEGAGGKPMIEILFKGEKKKFAPEEISSMVLVKMKEIAEAYLGKEVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYF 729
            M+ V+GESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNA+NTVFDAKR+IGRRF+D AV  D KHWPF+VI+G GGKP+I++ FKGE+K FAPEEISSMVL+KMKEIAEAYLGKEVKNAVVTVPAYFND QRQATKDAG+IAGLNV+RIINEPTAAAIAYGLDKKG EKNVLIFDLGGGTFDVS+LTIE+GIFEVKATAGDTHLGGEDFDNRMVD+F
Sbjct:    1 MAGVEGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNATNTVFDAKRLIGRRFTDTAVQQDMKHWPFTVIQGPGGKPIIKVNFKGEEKTFAPEEISSMVLLKMKEIAEAYLGKEVKNAVVTVPAYFNDGQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKGAEKNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRMVDHF 243          
BLAST of mRNA_H-elongata_contig50631.12311.1 vs. uniprot
Match: B8C635_THAPS (Heat shock protein 70 n=12 Tax=Eukaryota TaxID=2759 RepID=B8C635_THAPS)

HSP 1 Score: 436 bits (1121), Expect = 9.730e-148
Identity = 216/245 (88.16%), Postives = 230/245 (93.88%), Query Frame = 1
Query:    1 MSAVDGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNASNTVFDAKRMIGRRFSDPAVTADRKHWPFSVIEGAGGKPMIEILFKGEKKKFAPEEISSMVLVKMKEIAEAYLGKEVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQ 735
            M+ V GESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAK+Q AMNASNTVFDAKR+IGR+FSDP V +D KHWPF VI G GG P+IE+ +KGE K+F  EEISSMVL KMKEIAEAYLGKEVKNAVVTVPAYFNDSQRQATKDAG+I+GLNV+RIINEPTAAAIAYGLD+KGEEKNVLIFDLGGGTFDVS+LTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQ
Sbjct:    1 MAQVTGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKSQAAMNASNTVFDAKRLIGRKFSDPGVQSDMKHWPFKVIPGTGGTPIIEVEYKGETKQFKAEEISSMVLTKMKEIAEAYLGKEVKNAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDQKGEEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQ 245          
BLAST of mRNA_H-elongata_contig50631.12311.1 vs. uniprot
Match: A0A7S3Y1R1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1R1_HETAK)

HSP 1 Score: 424 bits (1091), Expect = 1.520e-147
Identity = 208/244 (85.25%), Postives = 227/244 (93.03%), Query Frame = 1
Query:    1 MSAVDGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNASNTVFDAKRMIGRRFSDPAVTADRKHWPFSVIEGAGGKPMIEILFKGEKKKFAPEEISSMVLVKMKEIAEAYLGKEVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFL 732
            M+ V GES+GIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGD+AKNQVAMNASNTVFDAKR IGR+F DPA   D KH PF+VI G GGKPMI++ FKGE K+FAPEEISSMVL KMKE AEAYLGK+VKNAV+TVPAYFNDSQRQATKDAG+IAGL V+RIINEPTAAAIAYGLD+KG EK+VLIFDLGGGTFDVS+L+IEEGIFEVKATAGDTHLGGEDFDNR+VD+F+
Sbjct:    1 MATVTGESIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDSAKNQVAMNASNTVFDAKRFIGRKFDDPATQEDMKHLPFTVISGKGGKPMIQVQFKGEAKQFAPEEISSMVLAKMKETAEAYLGKDVKNAVITVPAYFNDSQRQATKDAGAIAGLTVLRIINEPTAAAIAYGLDRKGREKHVLIFDLGGGTFDVSLLSIEEGIFEVKATAGDTHLGGEDFDNRLVDHFI 244          
BLAST of mRNA_H-elongata_contig50631.12311.1 vs. uniprot
Match: A0A7S2R704_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2R704_9STRA)

HSP 1 Score: 435 bits (1119), Expect = 8.320e-147
Identity = 216/245 (88.16%), Postives = 230/245 (93.88%), Query Frame = 1
Query:    1 MSAVDGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNASNTVFDAKRMIGRRFSDPAVTADRKHWPFSVIEGAGGKPMIEILFKGEKKKFAPEEISSMVLVKMKEIAEAYLGKEVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQ 735
            M+AV+GESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAF ETERLIGDAAKNQVAMNA NTVFDAKR+IGR+F+D AV AD KHWPF V+ G G KP I++ FKGE+K FAPEEISSMVL KM+EIAEAY+GK+VKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEE+NVLIFDLGGGTFDVS+LTIEEGIFEVKATAGDTHLGGEDFDNRMVD F Q
Sbjct:   39 MAAVEGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFNETERLIGDAAKNQVAMNARNTVFDAKRLIGRKFADDAVQADMKHWPFEVVPGPGQKPQIKVTFKGEEKVFAPEEISSMVLTKMREIAEAYVGKDVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVDSFTQ 283          
BLAST of mRNA_H-elongata_contig50631.12311.1 vs. uniprot
Match: A0A7S3L8T6_9STRA (Hypothetical protein (Fragment) n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S3L8T6_9STRA)

HSP 1 Score: 426 bits (1094), Expect = 1.590e-146
Identity = 210/243 (86.42%), Postives = 228/243 (93.83%), Query Frame = 1
Query:    7 AVDGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNASNTVFDAKRMIGRRFSDPAVTADRKHWPFSVIEGAGGKPMIEILFKGEKKKFAPEEISSMVLVKMKEIAEAYLGKEVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQ 735
            +V GESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFT+TERLIGDAAK+Q AMNA+NTVFDAKR+IGR+FSDP+V +D KHWPF V  G GG P+IE+ +KGE K+F  EEISSMVL KMKEIAEAYL KEVKNAVVTVPAYFNDSQRQATKDAG+I+GLNV+RIINEPTAAAIAYGLD+KG+EKNVLIFDLGGGTFDVS+LTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQ
Sbjct:    2 SVTGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQAAMNATNTVFDAKRLIGRKFSDPSVQSDMKHWPFKVKSGPGGAPIIEVEYKGETKEFKAEEISSMVLSKMKEIAEAYLAKEVKNAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDQKGDEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQ 244          
BLAST of mRNA_H-elongata_contig50631.12311.1 vs. uniprot
Match: F0XYC4_AURAN (Heat shock protein 70 n=7 Tax=Pelagomonadales TaxID=54409 RepID=F0XYC4_AURAN)

HSP 1 Score: 431 bits (1107), Expect = 1.430e-145
Identity = 213/244 (87.30%), Postives = 227/244 (93.03%), Query Frame = 1
Query:    1 MSAVDGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETERLIGDAAKNQVAMNASNTVFDAKRMIGRRFSDPAVTADRKHWPFSVIEGAGGKPMIEILFKGEKKKFAPEEISSMVLVKMKEIAEAYLGKEVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFL 732
            MS V GESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAF ETERLIGDAAKNQVAMNA NTVFDAKR+IGR+F+D AV +D KHWPF V  G GGKP I + ++ E+K FA EEISSMVL+KMKEIA+AYLGKEVKNAVVTVPAYFNDSQRQATKDAGSIAGLNV+RIINEPTAAAIAYGLDKKG+E+NVLIFDLGGGTFDVS+LTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFL
Sbjct:    1 MSTVTGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFNETERLIGDAAKNQVAMNAFNTVFDAKRLIGRKFTDAAVQSDMKHWPFKVTGGVGGKPQIHVTYRNEEKTFAAEEISSMVLIKMKEIADAYLGKEVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAAIAYGLDKKGDERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFL 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50631.12311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJT8_9PHAE7.320e-15791.84HSP70 protein n=10 Tax=Phaeophyceae TaxID=2870 Rep... [more]
A0A6H5KQY2_9PHAE1.010e-15590.04HSP70 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A835Z7M3_9STRA5.690e-15088.98Heat shock protein 70 n=3 Tax=Tribonema minus TaxI... [more]
A0A7S3Y1R9_HETAK2.360e-14986.42Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
H6WB83_VAULI2.050e-14888.89Heat shock protein 70 n=1 Tax=Vaucheria litorea Ta... [more]
B8C635_THAPS9.730e-14888.16Heat shock protein 70 n=12 Tax=Eukaryota TaxID=275... [more]
A0A7S3Y1R1_HETAK1.520e-14785.25Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2R704_9STRA8.320e-14788.16Hypothetical protein n=3 Tax=Dictyochophyceae TaxI... [more]
A0A7S3L8T6_9STRA1.590e-14686.42Hypothetical protein (Fragment) n=3 Tax=Bacillario... [more]
F0XYC4_AURAN1.430e-14587.30Heat shock protein 70 n=7 Tax=Pelagomonadales TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50631contigH-elongata_contig50631:930..2903 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score462.2
Seed ortholog evalue1.5e-127
Seed eggNOG ortholog2880.D8LI58
KEGG koko:K03283
KEGG TC1.A.33.1
KEGG Pathwayko03040,ko04010,ko04141,ko04144,ko04213,ko04612,ko04915,ko05134,ko05145,ko05162,ko05164,ko05169,map03040,map04010,map04141,map04144,map04213,map04612,map04915,map05134,map05145,map05162,map05164,map05169
KEGG ModuleM00353,M00355
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0015630,GO:0031982,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.ATP binding
EggNOG OGsCOG0443@1,KOG0101@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01009,ko03009,ko03029,ko03041,ko03051,ko03110,ko04131,ko04147,ko04516
Hectar predicted targeting categoryother localisation
Exons2
Model size753
Cds size753
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930831.7587621-CDS-H-elongata_contig50631:929..13521622930831.7587621-CDS-H-elongata_contig50631:929..1352Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50631 930..1352 +
1691679589.42797-CDS-H-elongata_contig50631:929..13521691679589.42797-CDS-H-elongata_contig50631:929..1352Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50631 930..1352 +
1622930831.7756717-CDS-H-elongata_contig50631:2573..29031622930831.7756717-CDS-H-elongata_contig50631:2573..2903Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50631 2574..2903 +
1691679589.4391015-CDS-H-elongata_contig50631:2573..29031691679589.4391015-CDS-H-elongata_contig50631:2573..2903Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50631 2574..2903 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50631.12311.1prot_H-elongata_contig50631.12311.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig50631 930..2903 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig50631.12311.1

>prot_H-elongata_contig50631.12311.1 ID=prot_H-elongata_contig50631.12311.1|Name=mRNA_H-elongata_contig50631.12311.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=251bp
MSAVDGESVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTETE
RLIGDAAKNQVAMNASNTVFDAKRMIGRRFSDPAVTADRKHWPFSVIEGA
GGKPMIEILFKGEKKKFAPEEISSMVLVKMKEIAEAYLGKEVKNAVVTVP
AYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIF
DLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQVNNRV
N
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mRNA from alignment at H-elongata_contig50631:930..2903+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig50631.12311.1 ID=mRNA_H-elongata_contig50631.12311.1|Name=mRNA_H-elongata_contig50631.12311.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1974bp|location=Sequence derived from alignment at H-elongata_contig50631:930..2903+ (Himanthalia elongata Himel1 dioecious)
ATGTCAGCCGTGGATGGAGAAAGCGTTGGTATTGACCTCGGCACCACGTA CTCTTGCGTCGGCGTTTGGCAAAACGACCGCGTGGAGATCATCGCCAATG ACCAAGGAAACCGTACCACACCGTCGTACGTCGCCTTCACTGAGACCGAG CGTCTCATCGGCGACGCAGCCAAGAACCAAGTGGCAATGAATGCGTCCAA CACTGTGTTTGATGCCAAGCGAATGATTGGCCGTCGCTTCAGCGATCCTG CAGTTACGGCCGATAGAAAGCACTGGCCTTTCAGCGTCATCGAGGGGGCC GGCGGGAAGCCAATGATCGAGATATTGTTTAAGGGCGAAAAGAAGAAGTT CGCCCCTGAGGAGATCTCGTCTATGGTGCTCGTGAAGATGAAGGAGATCG CTGAGGCCTACCTCGGCAAGGAGGTGAGCTTCGAATGACTCCTGCAAATA TATAATGCTGATACCACTTTACCTATAAATAGCGTTCGACGGTGAAACCT GCAAATTTTCATAAAACAGCCTTGTTCTCGAAGGTTTTCAGTATCTGCGA TGTTGATCTTACTCTGCGGAAAGTGTGACCAACAACATTTTTACCTCAAG AGGTAGTATTGAACACATTCGAACCTGACGATAGTTGGTACCCTGGACTG CACCTCTCATGGGGCTAAGAAGGCATGGATGTTTGGAGGGTTAGAATGAG AAGGTTTTCAAAAATAAAACACCCTGATTTCCAAATAAAACATATTTCCT CTAAAAGGAGAGCATGTTGTAAAACTGTCTTTGTTCACATCCTCTATCCG ATACGGTATGGTAAGGTCGGGTCGGACTTTGTGAGTCCAAAATATAATGC AAGGTGCACCAGTTGGACTCGTTGTTAGACAAGTGTCCCTTGTGTCCAAT ATCCACGAGCAGTAAGTTATTATTCAGCCCATTTCATTTTTTTAATCAAT TTGCATCACACTGCGCAAACTGTCATTCCACGCAAGAGAGCGAGCGCCAC GCCCGTTTGCTAATAACCCCTCCCCCCTTATGACGAATTCAAATATAATA ATTTTATAACTAGAGCCTTCCAGGTAAAATTCTTCCATCGAATTCTAAAG TTTTTTTTGAAGCCTGGATGTAAGTACTACGGGGTAGTCTAAATCGGATA GTAGTGACTGTATCACACATGCAACTCTCTGCCAATAGTAGGTGTGGGAA AAAAGAGAGGCAAACAATAATTGGTCCATGAAGTCACCTTATCAGTTCTG CACCCGTTACTCAATCTACCTTAAGGACCACTGTTTCAGTGCCGATGGAC TCTTGGTTAACGCCATCGGTACGCAATTGCGTGACTTGATGAAATCGGGA TTGTCCCGATAGGGGTTGACGGTAGAGATGGACGCCGTCGCGAAAAACGA GATGATCGGGAGGATCGCGGGAGTACGCACCAGATTCAGTCTAGTTTGAG GGAATGGGCAGGCTGACGCAGGGCGGGACTGCCTAACACTTCTCTCAGAA TAAAAATCAGGAGACGAAAAGAAATTATTTTTCCCTCAGCTATATATGAT GACCACATATTTTAACACAATCCCATGGATCATCTATTTGATCGAAGAAT CTCAAACTCTGTTCTCCGGCTGTGCAACTTTTCTAAAACCGCAGGTAAAA AACGCGGTGGTTACCGTACCCGCGTACTTCAATGACTCCCAGCGCCAGGC CACCAAGGACGCCGGTTCCATCGCCGGCCTGAACGTGATGCGTATCATTA ACGAGCCCACAGCCGCCGCCATCGCATACGGTCTCGACAAGAAGGGGGAG GAGAAAAACGTGCTAATCTTCGATCTCGGCGGGGGCACGTTCGATGTGTC GGTGCTGACGATCGAGGAGGGTATCTTCGAGGTGAAGGCCACCGCGGGTG ACACTCACTTGGGGGGCGAAGACTTCGATAACCGTATGGTGGACTACTTC TTGCAGGTAAATAATCGCGTTAAC
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Coding sequence (CDS) from alignment at H-elongata_contig50631:930..2903+

>mRNA_H-elongata_contig50631.12311.1 ID=mRNA_H-elongata_contig50631.12311.1|Name=mRNA_H-elongata_contig50631.12311.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1506bp|location=Sequence derived from alignment at H-elongata_contig50631:930..2903+ (Himanthalia elongata Himel1 dioecious)
ATGTCAGCCGTGGATGGAGAAAGCGTTGGTATTGACCTCGGCACCACGTA
CTCTTGCGTCGGCGTTTGGCAAAACGACCGCGTGGAGATCATCGCCAATG
ACCAAGGAAACCGTACCACACCGTCGTACGTCGCCTTCACTGAGACCGAG
CGTCTCATCGGCGACGCAGCCAAGAACCAAGTGGCAATGAATGCGTCCAA
CACTGTGTTTGATGCCAAGCGAATGATTGGCCGTCGCTTCAGCGATCCTG
CAGTTACGGCCGATAGAAAGCACTGGCCTTTCAGCGTCATCGAGGGGGCC
GGCGGGAAGCCAATGATCGAGATATTGTTTAAGGGCGAAAAGAAGAAGTT
CGCCCCTGAGGAGATCTCGTCTATGGTGCTCGTGAAGATGAAGGAGATCG
CTGAGGCCTACCTCGGCAAGGAGATGTCAGCCGTGGATGGAGAAAGCGTT
GGTATTGACCTCGGCACCACGTACTCTTGCGTCGGCGTTTGGCAAAACGA
CCGCGTGGAGATCATCGCCAATGACCAAGGAAACCGTACCACACCGTCGT
ACGTCGCCTTCACTGAGACCGAGCGTCTCATCGGCGACGCAGCCAAGAAC
CAAGTGGCAATGAATGCGTCCAACACTGTGTTTGATGCCAAGCGAATGAT
TGGCCGTCGCTTCAGCGATCCTGCAGTTACGGCCGATAGAAAGCACTGGC
CTTTCAGCGTCATCGAGGGGGCCGGCGGGAAGCCAATGATCGAGATATTG
TTTAAGGGCGAAAAGAAGAAGTTCGCCCCTGAGGAGATCTCGTCTATGGT
GCTCGTGAAGATGAAGGAGATCGCTGAGGCCTACCTCGGCAAGGAGGTAA
AAAACGCGGTGGTTACCGTACCCGCGTACTTCAATGACTCCCAGCGCCAG
GCCACCAAGGACGCCGGTTCCATCGCCGGCCTGAACGTGATGCGTATCAT
TAACGAGCCCACAGCCGCCGCCATCGCATACGGTCTCGACAAGAAGGGGG
AGGAGAAAAACGTGCTAATCTTCGATCTCGGCGGGGGCACGTTCGATGTG
TCGGTGCTGACGATCGAGGAGGGTATCTTCGAGGTGAAGGCCACCGCGGG
TGACACTCACTTGGGGGGCGAAGACTTCGATAACCGTATGGTGGACTACT
TCTTGCAGGTAAATAATCGCGTTAACGTAAAAAACGCGGTGGTTACCGTA
CCCGCGTACTTCAATGACTCCCAGCGCCAGGCCACCAAGGACGCCGGTTC
CATCGCCGGCCTGAACGTGATGCGTATCATTAACGAGCCCACAGCCGCCG
CCATCGCATACGGTCTCGACAAGAAGGGGGAGGAGAAAAACGTGCTAATC
TTCGATCTCGGCGGGGGCACGTTCGATGTGTCGGTGCTGACGATCGAGGA
GGGTATCTTCGAGGTGAAGGCCACCGCGGGTGACACTCACTTGGGGGGCG
AAGACTTCGATAACCGTATGGTGGACTACTTCTTGCAGGTAAATAATCGC
GTTAAC
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