mRNA_H-elongata_contig50573.12307.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig50573.12307.1 vs. uniprot
Match: A0A6H5JW60_9PHAE (Ald_Xan_dh_C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW60_9PHAE) HSP 1 Score: 120 bits (300), Expect = 4.000e-30 Identity = 57/66 (86.36%), Postives = 63/66 (95.45%), Query Frame = 1
Query: 1 QVVCRTKRLGGGFGGKETRSVFLSCVAALGARLTGRPVRLSLDRDVDMQITGHRHAFLARYRAGAS 198
+VVCRTKR+GGGFGGKETRSVFLSCVAALGA LT RPVR+ LDRDVDMQITGHRHAFLA+Y+AGA+
Sbjct: 52 KVVCRTKRMGGGFGGKETRSVFLSCVAALGAHLTKRPVRICLDRDVDMQITGHRHAFLAKYKAGAT 117
BLAST of mRNA_H-elongata_contig50573.12307.1 vs. uniprot
Match: D7G4V3_ECTSI (Xanthine dehydrogenase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4V3_ECTSI) HSP 1 Score: 117 bits (293), Expect = 4.430e-29 Identity = 55/66 (83.33%), Postives = 62/66 (93.94%), Query Frame = 1
Query: 1 QVVCRTKRLGGGFGGKETRSVFLSCVAALGARLTGRPVRLSLDRDVDMQITGHRHAFLARYRAGAS 198
+VVCRTKR+GG FGGKETRS+FLSCVAALGA LT RPVR+ LDRDVDMQITGHRHAFLA+Y+AGA+
Sbjct: 940 KVVCRTKRMGGAFGGKETRSIFLSCVAALGAHLTKRPVRICLDRDVDMQITGHRHAFLAKYKAGAT 1005
BLAST of mRNA_H-elongata_contig50573.12307.1 vs. uniprot
Match: W7TFQ7_9STRA (Xanthine dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFQ7_9STRA) HSP 1 Score: 108 bits (270), Expect = 5.670e-26 Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 1
Query: 1 QVVCRTKRLGGGFGGKETRSVFLSCVAALGARLTGRPVRLSLDRDVDMQITGHRHAFLARYRAGA 195
+VVCR KR+GGGFGGKETRSVF+SC AAL A LT RPVR+SLDRDVDM ITG RHAFLARY+A A
Sbjct: 905 RVVCRMKRMGGGFGGKETRSVFISCTAALAAHLTQRPVRISLDRDVDMHITGQRHAFLARYKAAA 969
BLAST of mRNA_H-elongata_contig50573.12307.1 vs. uniprot
Match: A0A836C8N1_9STRA (Xanthine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N1_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.970e-25 Identity = 50/65 (76.92%), Postives = 56/65 (86.15%), Query Frame = 1
Query: 4 VVCRTKRLGGGFGGKETRSVFLSCVAALGARLTGRPVRLSLDRDVDMQITGHRHAFLARYRAGAS 198
VVCR KR+GGGFGGKETRSVF+SC AAL A +TGRPV + LDRDVDMQ TG RHAF A+Y+AGAS
Sbjct: 824 VVCRMKRMGGGFGGKETRSVFISCAAALAAHVTGRPVNIMLDRDVDMQTTGQRHAFTAKYKAGAS 888
BLAST of mRNA_H-elongata_contig50573.12307.1 vs. uniprot
Match: B8CFF5_THAPS (FAD-binding PCMH-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFF5_THAPS) HSP 1 Score: 96.7 bits (239), Expect = 8.790e-22 Identity = 47/65 (72.31%), Postives = 55/65 (84.62%), Query Frame = 1
Query: 1 QVVCRTKRLGGGFGGKETRSVFLSCVAALGARLTGRPVRLSLDRDVDMQITGHRHAFLARYRAGA 195
+VV R KR+GGGFGGKETRSVF+S AA+ A+LT RPVRL+L+RD DM ITG RHAFLA Y+AGA
Sbjct: 757 KVVVRMKRMGGGFGGKETRSVFVSVAAAVAAKLTNRPVRLTLNRDTDMSITGGRHAFLAHYKAGA 821
BLAST of mRNA_H-elongata_contig50573.12307.1 vs. uniprot
Match: A0A7S1ER10_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER10_9RHOD) HSP 1 Score: 96.7 bits (239), Expect = 8.790e-22 Identity = 43/65 (66.15%), Postives = 55/65 (84.62%), Query Frame = 1
Query: 1 QVVCRTKRLGGGFGGKETRSVFLSCVAALGARLTGRPVRLSLDRDVDMQITGHRHAFLARYRAGA 195
++VCRTKR+GGGFGGKETR++F+SC A+ A G+PVRL L+RDVDM I+G RHAFLA+Y+A A
Sbjct: 826 RIVCRTKRIGGGFGGKETRNMFMSCAVAVAANKLGKPVRLVLERDVDMAISGQRHAFLAKYKAAA 890
BLAST of mRNA_H-elongata_contig50573.12307.1 vs. uniprot
Match: A0A7S3VF44_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VF44_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 8.800e-22 Identity = 44/65 (67.69%), Postives = 58/65 (89.23%), Query Frame = 1
Query: 1 QVVCRTKRLGGGFGGKETRSVFLSCVAALGARLTGRPVRLSLDRDVDMQITGHRHAFLARYRAGA 195
+VV + KR+GGGFGGKETRSVF+SC A++ A+++ RPVRL+LDR+VDMQITG RHAF+A+Y+A A
Sbjct: 942 KVVVKMKRMGGGFGGKETRSVFVSCAASVAAKISDRPVRLTLDRNVDMQITGTRHAFMAKYKASA 1006
BLAST of mRNA_H-elongata_contig50573.12307.1 vs. uniprot
Match: A0A5B8MMF7_9CHLO (Xanthine dehydrogenase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MMF7_9CHLO) HSP 1 Score: 95.9 bits (237), Expect = 1.640e-21 Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = 1
Query: 1 QVVCRTKRLGGGFGGKETRSVFLSCVAALGARLTGRPVRLSLDRDVDMQITGHRHAFLARYRAG 192
+VVC+TKRLGGGFGGKETR++F++C AA+ A RPVRL LDRD DMQITGHRHAF +Y+ G
Sbjct: 809 KVVCKTKRLGGGFGGKETRAIFINCAAAVPAYDLQRPVRLCLDRDEDMQITGHRHAFYGKYKVG 872
BLAST of mRNA_H-elongata_contig50573.12307.1 vs. uniprot
Match: A0A6B2LQM0_9EUKA (Ald_Xan_dh_C2 domain-containing protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LQM0_9EUKA) HSP 1 Score: 88.6 bits (218), Expect = 2.860e-21 Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = 1
Query: 1 QVVCRTKRLGGGFGGKETRSVFLSCVAALGARLTGRPVRLSLDRDVDMQITGHRHAFLARYRAG 192
++V + KRLGGGFGGKETRS+F+SC AA+ A+ +PV+L LDRD DMQITG RH FL +Y+ G
Sbjct: 7 KIVIKVKRLGGGFGGKETRSIFMSCAAAVAAKKVQKPVKLVLDRDDDMQITGGRHPFLGKYKVG 70
BLAST of mRNA_H-elongata_contig50573.12307.1 vs. uniprot
Match: A0A7S3XDZ6_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XDZ6_9CHLO) HSP 1 Score: 94.7 bits (234), Expect = 4.170e-21 Identity = 44/62 (70.97%), Postives = 52/62 (83.87%), Query Frame = 1
Query: 1 QVVCRTKRLGGGFGGKETRSVFLSCVAALGARLTGRPVRLSLDRDVDMQITGHRHAFLARYR 186
+VVCRTKR+GGGFGGKETRS +++C AA+ A L RPVRL LDRD DMQ +GHRHAFL RY+
Sbjct: 816 KVVCRTKRIGGGFGGKETRSFYVACAAAVPAYLLKRPVRLCLDRDEDMQTSGHRHAFLCRYK 877 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50573.12307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig50573.12307.1 >prot_H-elongata_contig50573.12307.1 ID=prot_H-elongata_contig50573.12307.1|Name=mRNA_H-elongata_contig50573.12307.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp QVVCRTKRLGGGFGGKETRSVFLSCVAALGARLTGRPVRLSLDRDVDMQIback to top mRNA from alignment at H-elongata_contig50573:917..1120- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig50573.12307.1 ID=mRNA_H-elongata_contig50573.12307.1|Name=mRNA_H-elongata_contig50573.12307.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=204bp|location=Sequence derived from alignment at H-elongata_contig50573:917..1120- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig50573:917..1120- >mRNA_H-elongata_contig50573.12307.1 ID=mRNA_H-elongata_contig50573.12307.1|Name=mRNA_H-elongata_contig50573.12307.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=408bp|location=Sequence derived from alignment at H-elongata_contig50573:917..1120- (Himanthalia elongata Himel1 dioecious)back to top |