mRNA_H-elongata_contig50314.12264.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: D7FVN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN9_ECTSI) HSP 1 Score: 372 bits (955), Expect = 2.190e-123 Identity = 178/223 (79.82%), Postives = 198/223 (88.79%), Query Frame = 1
Query: 1 VLIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRISTPVYKGRNPLSHAEIEAEYGSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRLV 669
VLIYDLAK+HLVE+LKYPP L MEYD DFAIMGLTVDMDKGLL KLSYINRIS PVY+GR LS EIEAEYGSYP V P YRR LKPLNDRFCLAE CLLADV++++Q++AG +AFHPRAVVEDVL AVTHVHVSG +H+ VL DIGR+IQPS+RLEHML+TLK+AGKKLFISSNSPW+FVNAGMEHMLGP W +LF+F+GV ASKPLFYTGSRPFRLV
Sbjct: 180 VLIYDLAKEHLVEELKYPPSLMEMEYDPDFAIMGLTVDMDKGLLFKLSYINRISMPVYRGRTALSREEIEAEYGSYPKMVSPGYRRKQLKPLNDRFCLAEGCLLADVMEHLQAAAGKKAFHPRAVVEDVLAAVTHVHVSGKMHEAVLGDIGRFIQPSYRLEHMLRTLKDAGKKLFISSNSPWRFVNAGMEHMLGPTWNDLFDFIGVGASKPLFYTGSRPFRLV 402
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: K3WPG0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPG0_GLOUD) HSP 1 Score: 200 bits (508), Expect = 4.750e-58 Identity = 103/224 (45.98%), Postives = 154/224 (68.75%), Query Frame = 1
Query: 4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEY-GSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRLV 669
LIY +A+++LV L+YP G++ ++YD FAI GLT+D +KGLLCK+S ++S + V++GR LS EI Y GS +V +R N ++PLND F LA ACL ADVVQY+ + + P A+VEDV A++ VHVSG++H V D+ +YI+P+ L +L+ ++ +GKK+FI +NS + +++AG+++M+G +W ELF+ V V A KP FYT R FRL+
Sbjct: 110 LIYSMAREYLVNKLRYPEGISVLQYDPSFAIRGLTIDTEKGLLCKISSHQKLSISSVFRGRQRLSRDEIMKLYEGSRHVSV--HHRDNKMEPLNDLFSLAHACLFADVVQYLLEA--DIEYEPIAIVEDVRDAISQVHVSGMMHKAVAQDLEKYIEPNPMLLPLLERIRKSGKKMFICTNSSFPYIDAGLKYMIGDDWRELFDVVAVSARKPNFYTRHRAFRLL 329
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: A0A5D6XYX2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYX2_9STRA) HSP 1 Score: 197 bits (500), Expect = 6.500e-57 Identity = 104/223 (46.64%), Postives = 150/223 (67.26%), Query Frame = 1
Query: 4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEYGSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRLV 669
LIY +A+ +LV L+YP G+A +++D FAI GLT+D +KGLLCK+S ++S T VY+GR L+ EI YG V +R + ++PLND F +A ACL ADVVQY+ + + P AVVEDV A+T VHVSG +H V D+ RYI+P+ L +L+ L+++GKK+F+ +NS +++++AG+ M+G +W +LFE V V A KP FYT R FRL+
Sbjct: 81 LIYAMARDYLVNKLRYPAGVAVLQFDPSFAIRGLTIDSEKGLLCKISSHQKLSYTGVYRGRQRLTREEIMELYGG-SRHVPIHHRDHKMEPLNDLFSVAHACLFADVVQYLIDN--DIEYEPIAVVEDVHAAITQVHVSGNMHKAVAQDLPRYIEPNPALLPLLERLRSSGKKMFVCTNSTFQYIDAGLRFMIGGDWRQLFEVVIVSARKPDFYTRHRDFRLL 300
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: H3HDU7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HDU7_PHYRM) HSP 1 Score: 194 bits (493), Expect = 7.320e-56 Identity = 101/221 (45.70%), Postives = 146/221 (66.06%), Query Frame = 1
Query: 4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEYGSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFR 663
LIY +A+ +LV L+YP G++ ++YD FAI GLT+D KGLLCK+S ++S T V++GR LS EI YG + R +++PLND F +A ACL ADVVQY+ + P A+VEDV +A+ +VH+SG +H V D+ +YI+PS L +L+ ++N+GKK F+ +NS + ++NAG+++MLG +W ELF+ V V A KP FYT R FR
Sbjct: 96 LIYSMARDYLVGKLRYPEGVSVLQYDPSFAIRGLTIDKQKGLLCKISSHQKLSNTAVFRGRQRLSRDEIIELYGG-SRHISVSDRDYNMEPLNDLFSVAHACLFADVVQYMMDR--DIEYEPVALVEDVNQAIANVHLSGDMHKEVALDLPKYIEPSPTLRPLLERIRNSGKKTFLCTNSSFAYINAGLKYMLGDDWRELFDVVIVSARKPKFYTRQRSFR 313
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: A0A8K1CNG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNG8_PYTOL) HSP 1 Score: 195 bits (495), Expect = 7.750e-56 Identity = 97/223 (43.50%), Postives = 144/223 (64.57%), Query Frame = 1
Query: 4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEYGSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRLV 669
LIYD+A+ +L+ +YP G+ + YD FAI GLT+D +KGLLCK+S ++S T VY+GR LS EI EY + YR NS++PLND F +A ACL ADV+Q++ + P A+VEDV A+ VH+SG +H V D+ +Y++P L +L+ ++ GKK+F+ +NS +++++AG++ M+G +W +LF V V A KP FYT R FRL+
Sbjct: 117 LIYDMARDYLIHKFRYPSGIEQLRYDPTFAIRGLTIDKEKGLLCKISSHQKLSYTGVYRGRQRLSRDEIMEEYNG-SRHISVAYRDNSMEPLNDLFSVAHACLFADVMQFLMDE--DIEYEPIAIVEDVNAAIAQVHLSGRMHKAVAQDLAKYLEPKPTLLPLLERIRRNGKKMFLCTNSSFQYIDAGLKFMIGDDWRDLFNVVLVSARKPNFYTRQRSFRLL 336
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: K8YVS7_NANGC (5-nucleotidase domain-containing n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YVS7_NANGC) HSP 1 Score: 189 bits (481), Expect = 1.220e-55 Identity = 105/225 (46.67%), Postives = 143/225 (63.56%), Query Frame = 1
Query: 4 LIYDLAKQHLVEDLKYPPGLASME-YDKDFAIMGLTVDMDKGLLCKLSYINRIST-PVYKGRNPLSHAEIEAEYGSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPR-AVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRLV 669
LIY +AK +L+E YP + + YD FA+ GL VD+D+G + KLSYI++I+ V+ GR LS E+ A YG V PQYR N +KPL D F L+EACL+ADV+ Y+ H R AVVEDVL+A++HVH SG +H V+ D Y+ PS L L ++ GKKLF+ SNS +++V+ G++ +LG +W E F+ V V A KP FYT +RPFR V
Sbjct: 4 LIYSMAKDYLIEHSGYPSEMKTRRMYDPRFAVRGLAVDVDRGWVLKLSYIHQIALRTVFCGRRRLSKEEVVAAYGD-GAHVSPQYRNNHMKPLLDLFALSEACLVADVLDYLNEL---NIHHDRQAVVEDVLQAISHVHTSGEMHKTVVRDPPTYMLPSPHLRETLMRFRDVGKKLFLCSNSNFEYVSGGLQFLLGADWQEFFDVVIVSAGKPGFYTSNRPFRQV 224
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: W2ZUA4_PHYPR (Uncharacterized protein n=2 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2ZUA4_PHYPR) HSP 1 Score: 192 bits (488), Expect = 3.390e-55 Identity = 98/223 (43.95%), Postives = 149/223 (66.82%), Query Frame = 1
Query: 4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEYGSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRLV 669
LIY +A+ ++V L+YP G++ ++YD FAI GLT+D KGLLCK+S ++S T V++GR LS E+ YG + R +++PLND F +A ACL ADVVQY+ + P A+VEDV +A+T+VH+SG +H V D+ +YI+P+ L +L+ ++++GKK F+ +NS + ++NAG+++MLG +W ELF+ V V A KP FYT R FR++
Sbjct: 77 LIYAMARDYMVSKLRYPEGVSVLQYDPSFAIRGLTIDKQKGLLCKISSHQKLSNTAVFRGRQRLSRDEVMELYGG-SRHISVHDRDYNMEPLNDLFSVAHACLFADVVQYMIDR--DIEYEPIALVEDVNQAITNVHLSGEMHKEVARDLPKYIEPNPALRPLLERIRDSGKKSFLCTNSSFPYINAGLKYMLGDDWRELFDVVIVSARKPKFYTRQRSFRML 296
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: A0A2D4CIZ8_PYTIN (5'-nucleotidase domain-containing protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIZ8_PYTIN) HSP 1 Score: 192 bits (488), Expect = 7.510e-55 Identity = 104/225 (46.22%), Postives = 153/225 (68.00%), Query Frame = 1
Query: 4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEY-GSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIE-LFEFVGVMASKPLFYTGSRPFRLV 669
LIY +A+ +L++ +YP G+ S+ +D FAI GLT+D +KGLLCK+S ++ T VY+GR+ LS EI Y GS ++ QYR + ++PLND F +A ACL ADVVQY+ AG + P A+VEDV A+T VH SG +H V D+ RY++PS L L+ ++N+GKK+F+ +NS +++++AG+ +M+G +W E LF+ V V A KP FYT +R FRL+
Sbjct: 123 LIYGMARDYLIKKYRYPGGMESLTFDPTFAIRGLTIDKEKGLLCKISSHQKLCYTGVYRGRHRLSREEIMHLYEGSRHISI--QYRDHKMEPLNDLFSVAHACLFADVVQYL-IDAGIE-YEPIAIVEDVHAAITQVHTSGHMHKAVAKDLPRYVEPSPMLLPFLERIRNSGKKMFLCTNSSFQYIDAGLRYMIGDDWREVLFDVVLVSARKPKFYTRNRSFRLL 343
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: A0A2D4CCU9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCU9_PYTIN) HSP 1 Score: 197 bits (500), Expect = 9.170e-55 Identity = 104/224 (46.43%), Postives = 153/224 (68.30%), Query Frame = 1
Query: 4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEY-GSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRLV 669
LIY +A+ +L++ +YP G+ S+ +D FAI GLT+D +KGLLCK+S ++ T VY+GR+ LS EI Y GS ++ QYR + ++PLND F +A ACL ADVVQY+ AG + P A+VEDV A+T VH SG +H V D+ RY++PS L L+ ++N+GKK+F+ +NS +++++AG+ +M+G +W ELF+ V V A KP FYT +R FRL+
Sbjct: 123 LIYGMARDYLIKKYRYPGGMESLTFDPTFAIRGLTIDKEKGLLCKISSHQKLCYTGVYRGRHRLSREEIMHLYEGSRHISI--QYRDHKMEPLNDLFSVAHACLFADVVQYL-IDAGIE-YEPIAIVEDVHAAITQVHTSGHMHKAVAKDLPRYVEPSPMLLPFLERIRNSGKKMFLCTNSSFQYIDAGLRYMIGDDWRELFDVVLVSARKPKFYTRNRSFRLL 342
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: A0A6G0X941_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X941_9STRA) HSP 1 Score: 192 bits (488), Expect = 7.630e-54 Identity = 97/222 (43.69%), Postives = 146/222 (65.77%), Query Frame = 1
Query: 4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEYGSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRL 666
LIY++AK LV L+YP GL +EYD FAI GL +D +K LLCK+S ++S T V++GR L+ EI Y + YR ++KPL+D F +A+ACL ADV+Q+ + A+ PRAV ED+ +++ VH SG +H V+ D+ R+++P+ +L +L+ + GKKLF+ +NS +++++AG+ +M+G +W ELF+ V V A KP FYT SR FRL
Sbjct: 273 LIYNMAKDALVHKLRYPQGLLQLEYDPSFAIRGLAIDTEKALLCKISSHQKLSYTGVFRGRQRLTRQEILQAYNG-SRHIPISYRSENMKPLSDLFSVAQACLFADVIQFFVDN--QIAYEPRAVHEDIDSSISEVHTSGTMHKAVVQDLPRFMEPTKKLRVLLERFRQDGKKLFVCTNSSFRYIDAGLRYMVGNDWRELFDLVLVSAKKPDFYTRSRMFRL 491 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig50314.12264.1 >prot_H-elongata_contig50314.12264.1 ID=prot_H-elongata_contig50314.12264.1|Name=mRNA_H-elongata_contig50314.12264.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=223bp VLIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYIback to top mRNA from alignment at H-elongata_contig50314:999..3747+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig50314.12264.1 ID=mRNA_H-elongata_contig50314.12264.1|Name=mRNA_H-elongata_contig50314.12264.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2749bp|location=Sequence derived from alignment at H-elongata_contig50314:999..3747+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig50314:999..3747+ >mRNA_H-elongata_contig50314.12264.1 ID=mRNA_H-elongata_contig50314.12264.1|Name=mRNA_H-elongata_contig50314.12264.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1338bp|location=Sequence derived from alignment at H-elongata_contig50314:999..3747+ (Himanthalia elongata Himel1 dioecious)back to top |