mRNA_H-elongata_contig50132.12240.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig50132.12240.1
Unique NamemRNA_H-elongata_contig50132.12240.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig50132.12240.1 vs. uniprot
Match: A0A6H5JMA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA8_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 4.390e-132
Identity = 224/427 (52.46%), Postives = 291/427 (68.15%), Query Frame = 1
Query:    1 LTMAKGKKRLTNVGRGRPRSEIKKTKTERVRDAVALDRLRVQLNVQKAALSATLLKIKERENATKVKERGITKKEADISRATTKRVADGQRENELIEAAAQTSNSRLLEFSLDFINNSLENLKPKTEQILCKT*SRLILMLLFTLRKEGSSENKAVNQVSKTFKIGHEKVREVSNHWWNHRELYEPAGSRRGKVTKKGEKRCRLTQEQDEQLHEFINGEHKAGRQVFHRTVADWMCTTCSTETLLSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRFARIRLFFVEIDIAKRAEDTGLAFIVYMDESFVHQGHGSPYSYVLTDDDGVVQNGIGRTTGKGLCMIMVHVITKWGSLVRPFEKFSLEKGWFKSTENGRGKQGGKEFKMKDEEKAEFLWQAKLAKGDYHAAMIDSIFMEWLEHRFTPAFKAL 1281
            +   KG+++ T    GRP    K+ KT   R  +A +RL+ +L  Q+AAL+A                        +++RA   R    Q++ E ++AAA  +  ++ +  LD+++ S+  +KPK  ++  +  SR++LMLLF LRK G SE +AV +V++TFKIGH+KVR ++NHWW+HR+LYE     RGK  KK + R RLT+ Q++QL EFIN EHKAGRQVF RTVA+WM  TC+ E   SN + GGLL RLG +RRRGRIKTPPL A+R ARIR F VE+ +AKRAED GLA IVY+DESFVHQ HGSPYSY  +DDDGVVQ+GIGRTTGKGL MIMVH ITKWG L +  +   +E+GWFK T +G+ +       M+DEE  EFLWQA LAKGDYHAAM DS+FMEWLEHR +PA+ A+
Sbjct:   37 MAKPKGRRQPTGGVVGRPSKSDKRAKTAAARGPLAQERLQAELEQQRAALAADRXXXXXXXXXXXXXXXXXXXXXXEMARAAAPREMREQQDVERVQAAAAAAAEKVAQ-GLDYMDTSVHEVKPKKGEVWTQLQSRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNGSAGGLLSRLGCKRRRGRIKTPPLKAERLARIRRFLVEMVMAKRAEDAGLAVIVYVDESFVHQAHGSPYSYFPSDDDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETGSGKKE-------MEDEETVEFLWQATLAKGDYHAAMTDSMFMEWLEHRLSPAYNAI 454          
BLAST of mRNA_H-elongata_contig50132.12240.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI)

HSP 1 Score: 405 bits (1041), Expect = 4.300e-129
Identity = 204/316 (64.56%), Postives = 252/316 (79.75%), Query Frame = 1
Query:  334 LDFINNSLENLKPKTEQILCKT*SRLILMLLFTLRKEGSSENKAVNQVSKTFKIGHEKVREVSNHWWNHRELYEPAGSRRGKVTKKGEKRCRLTQEQDEQLHEFINGEHKAGRQVFHRTVADWMCTTCSTETLLSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRFARIRLFFVEIDIAKRAEDTGLAFIVYMDESFVHQGHGSPYSYVLTDDDGVVQNGIGRTTGKGLCMIMVHVITKWGSLVRPFEKFSLEKGWFKSTENGRGKQGGKEFKMKDEEKAEFLWQAKLAKGDYHAAMIDSIFMEWLEHRFTPAFKAL 1281
            L++++ S+  +KPK  ++     SR++LMLLF LRKEG SEN+AV QV++TFKIGH+KVR ++NHWW+HR+LYE   + RGK+ K+ + R RLT+ Q +QL EFIN EHKAGRQVF RTVA+W+  TC+ E   SNR+VGGLL RLGY+RRRGRIKTPPL+A+R ARIR F VE+D+AKRAED GLA IVYMDESFVHQ HGSPYSY  +D++GVVQ+GIGRTTGKGL MIMVH ITKWG L +  + F +E+GWFK T +G+ K       M+DEE AEFLWQAKLAKGDYHAAM DS+FMEWLEHR +PA+ A+
Sbjct:  115 LNYMDTSVHEVKPKKGEVWTHLQSRMVLMLLFDLRKEGRSENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAAGRGKMAKEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNMEQP-SNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKFCDGFPIEEGWFKETGSGKKK-------MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAI 422          
BLAST of mRNA_H-elongata_contig50132.12240.1 vs. uniprot
Match: A0A6H5KAU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAU4_9PHAE)

HSP 1 Score: 397 bits (1020), Expect = 8.910e-129
Identity = 204/322 (63.35%), Postives = 249/322 (77.33%), Query Frame = 1
Query:  316 RLLEFSLDFINNSLENLKPKTEQILCKT*SRLILMLLFTLRKEGSSENKAVNQVSKTFKIGHEKVREVSNHWWNHRELYEPAGSRRGKVTKKGEKRCRLTQEQDEQLHEFINGEHKAGRQVFHRTVADWMCTTCSTETLLSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRFARIRLFFVEIDIAKRAEDTGLAFIVYMDESFVHQGHGSPYSYVLTDDDGVVQNGIGRTTGKGLCMIMVHVITKWGSLVRPFEKFSLEKGWFKSTENGRGKQGGKEFKMKDEEKAEFLWQAKLAKGDYHAAMIDSIFMEWLEHRFTPAFKAL 1281
            RLL+  LD+++ S+  +KPK +++  +  SR++LMLLF LRK G  EN+AV QV++TFKIGH+KVR ++NHWW+HR+LYE     RGK  KK + R RLT+ Q++QL EFIN EHKAGRQVF RTVA+WM  TC+ E   SNR+ GGLL RLGY+RRRGRIKTPPL+A+R ARIR F VE+D+AKRAED GLA IVYMDESFVHQ HGSP SY  +D+DGVVQ+GIGRTTGKGL MIMVH ITKWG L +    F +E+GWFK T +G+ +       M+DEE AEFLWQ KLAKGD HAAM DS+FMEWLEHR  PA+ A+
Sbjct:   49 RLLK-GLDYMDTSVHEVKPKKDEVWTQLQSRMVLMLLFDLRKGGCCENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPCSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCYGFPIEEGWFKETGSGKKE-------MEDEETAEFLWQVKLAKGDNHAAMTDSMFMEWLEHRLNPAYNAI 361          
BLAST of mRNA_H-elongata_contig50132.12240.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE)

HSP 1 Score: 384 bits (987), Expect = 1.770e-121
Identity = 195/293 (66.55%), Postives = 233/293 (79.52%), Query Frame = 1
Query:  403 SRLILMLLFTLRKEGSSENKAVNQVSKTFKIGHEKVREVSNHWWNHRELYEPAGSRRGKVTKKGEKRCRLTQEQDEQLHEFINGEHKAGRQVFHRTVADWMCTTCSTETLLSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRFARIRLFFVEIDIAKRAEDTGLAFIVYMDESFVHQGHGSPYSYVLTDDDGVVQNGIGRTTGKGLCMIMVHVITKWGSLVRPFEKFSLEKGWFKSTENGRGKQGGKEFKMKDEEKAEFLWQAKLAKGDYHAAMIDSIFMEWLEHRFTPAFKAL 1281
            SR++LMLLF LRK G SE +AV +V++TFKIGH+KVR ++NHWW+HR+LYE     RGK  KK + R RLT+ Q++QL EFIN EHKAGRQVF RTVA+WM  TC+ E   SNR+ GGLL RLGY+RRRGRIKTPPL+A+R ARIR F VE+ +AKRAED GLA IVYMDESFVHQ HGSPYSY  +D+DGVVQ+GIGRTTGKGL MIMVH ITKWG L +  +   +E+GWFK T +G+ +       M+DEE AEFLWQAKLAKGDYHAAM DS+FMEWLEHR +PA+ A+
Sbjct:  104 SRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYEITAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETGSGKKE-------MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAI 388          
BLAST of mRNA_H-elongata_contig50132.12240.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE)

HSP 1 Score: 374 bits (960), Expect = 1.040e-119
Identity = 190/291 (65.29%), Postives = 228/291 (78.35%), Query Frame = 1
Query:  409 LILMLLFTLRKEGSSENKAVNQVSKTFKIGHEKVREVSNHWWNHRELYEPAGSRRGKVTKKGEKRCRLTQEQDEQLHEFINGEHKAGRQVFHRTVADWMCTTCSTETLLSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRFARIRLFFVEIDIAKRAEDTGLAFIVYMDESFVHQGHGSPYSYVLTDDDGVVQNGIGRTTGKGLCMIMVHVITKWGSLVRPFEKFSLEKGWFKSTENGRGKQGGKEFKMKDEEKAEFLWQAKLAKGDYHAAMIDSIFMEWLEHRFTPAFKAL 1281
            ++LMLLF LRKEG +EN+AV QV++TFKIGH+KVR ++NHWW+HR+LYE     RGK  KK + R RLT+ Q++QL EFIN EHKAGRQVF RTVA+WM  TC+ E   SNR+  GLL RLGY+ RRGRIKTPPL+A+R ARIR F VE+D+AKRAED GLA IVY+D SFVHQ HGSPYSY   D+D VVQ+GIGRTTGKGL +IMVH ITKWG L +      +E+GWFK T +G+ +       M+DEE AEFLWQAKLAKGDYHAAM DS+FMEWLEHR +PA+ A+
Sbjct:    1 MVLMLLFDLRKEGRAENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNRSAEGLLSRLGYKGRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYIDGSFVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAITKWGPLAKLCVGLPIEEGWFKETGSGKRE-------MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAI 283          
BLAST of mRNA_H-elongata_contig50132.12240.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 1.200e-115
Identity = 182/270 (67.41%), Postives = 216/270 (80.00%), Query Frame = 1
Query:  472 QVSKTFKIGHEKVREVSNHWWNHRELYEPAGSRRGKVTKKGEKRCRLTQEQDEQLHEFINGEHKAGRQVFHRTVADWMCTTCSTETLLSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRFARIRLFFVEIDIAKRAEDTGLAFIVYMDESFVHQGHGSPYSYVLTDDDGVVQNGIGRTTGKGLCMIMVHVITKWGSLVRPFEKFSLEKGWFKSTENGRGKQGGKEFKMKDEEKAEFLWQAKLAKGDYHAAMIDSIFMEWLEHRFTPAFKAL 1281
            QV++TFKIGH+KVR ++NHWW+HR+LYE     RGK  KK + R RLT+ Q++QL EFIN EHKAGRQVF RTVA+WM  TC+ E   SNR+ GGLL RLGY+RRRGRIKTPPL+A+R ARIR F VE+D+AKRAED GLA IVYMDESFVHQ HGSPYSY  +D+DGVVQ+GIGRTTGKGL MIMVH ITKWG L +  +   +E+GWFK T +G+ +       M+DEE AEFLWQAKLAKGDYHAAM DS+FMEWLEHR +PA+ A+
Sbjct:   10 QVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETGSGKKE-------MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAI 271          
BLAST of mRNA_H-elongata_contig50132.12240.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 7.470e-113
Identity = 196/357 (54.90%), Postives = 254/357 (71.15%), Query Frame = 1
Query:  229 DISRATTKRVADGQRENELIEAAAQTSNSRLLEFSLDFINNSLENLKPKTEQILCKT*SRLILMLLFTLRKEGSSENKAVNQVSKTFKIGHEKVREVSNHWWNHRELYEPAGSRRGKVTKKGEKRCRLTQEQDEQLHEFINGEHKAGRQVFHRTVADWMCTTCSTETLLSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRFARIRLFFVEIDIAKRAEDTGLAFIVYMDESFVHQGHGSPYSYVLTDDDGVVQNGIGRTTGKGLCMIMVHVITKWGSLVRPFEKFSLEKGWFKSTENG--RGKQGGKEFKMKDEEKAEFLWQAKLAKGDYHAAMIDSIFMEWLEHRFTPAFKALLKNR 1293
            DI+++   +    +RE + +  AA+ + S+L   +L F+ +S+++L+PKT ++     SR+ILML F L K GSSEN A  QV+KT +IG +KV  V   W++ +ELYE  G  RGK T   + R  +T+EQ++ L EFI GEH+AGRQVF RTV D++   CS    +SNRAVGGLLQRLG++RRRGRIK PPL+ +R  RIRLF V++D+AKRAED G+A IVYMDESFVHQ HGS YSY  +DD G+VQ+GIGRTTGKGL MIMVH IT+ G L    E F + +GWFK+ EN   + K G  +F+M DE+ AEFLWQAKLA GDYH AM D +FM+WL+HR TPAF A  KN+
Sbjct:   46 DIAKSDVLQQQRERREQDRVSKAAEAATSKLPPLALKFVEDSVQSLRPKTGELTTLQQSRIILMLYFDLVKGGSSENHAKEQVAKTLRIGTDKVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYL--ECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAELQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNK 400          
BLAST of mRNA_H-elongata_contig50132.12240.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 3.150e-110
Identity = 180/270 (66.67%), Postives = 215/270 (79.63%), Query Frame = 1
Query:  472 QVSKTFKIGHEKVREVSNHWWNHRELYEPAGSRRGKVTKKGEKRCRLTQEQDEQLHEFINGEHKAGRQVFHRTVADWMCTTCSTETLLSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRFARIRLFFVEIDIAKRAEDTGLAFIVYMDESFVHQGHGSPYSYVLTDDDGVVQNGIGRTTGKGLCMIMVHVITKWGSLVRPFEKFSLEKGWFKSTENGRGKQGGKEFKMKDEEKAEFLWQAKLAKGDYHAAMIDSIFMEWLEHRFTPAFKAL 1281
            QV++TFKIGH+KVR ++NHWW+HR+LYE     RGK  KK + R RLT+ Q++QL EFIN EHKAGRQVF RTVA+WM  TC+ E   SNR+ GGLL RLGY+RRRGRIKTPPL+A+R ARIR F V +++AKRAED GLA IVYMDESFVHQ HGSPYSY  +D+DGVVQ+GIGRTTGKGL MIMVH ITKWG L +  +   +E+GWFK T +G+ +       M+DEE AEFLWQAKLAKGDYHAAM DS+FMEWLEHR +PA+ A+
Sbjct:  138 QVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLV-MNMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETGSGKKE-------MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAI 398          
BLAST of mRNA_H-elongata_contig50132.12240.1 vs. uniprot
Match: A0A6H5JWX3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWX3_9PHAE)

HSP 1 Score: 333 bits (854), Expect = 9.710e-107
Identity = 167/255 (65.49%), Postives = 199/255 (78.04%), Query Frame = 1
Query:  517 VSNHWWNHRELYEPAGSRRGKVTKKGEKRCRLTQEQDEQLHEFINGEHKAGRQVFHRTVADWMCTTCSTETLLSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRFARIRLFFVEIDIAKRAEDTGLAFIVYMDESFVHQGHGSPYSYVLTDDDGVVQNGIGRTTGKGLCMIMVHVITKWGSLVRPFEKFSLEKGWFKSTENGRGKQGGKEFKMKDEEKAEFLWQAKLAKGDYHAAMIDSIFMEWLEHRFTPAFKAL 1281
            ++NHWW+HR+LY      RGK  KK + R RLT+ Q++QL EFIN EHKAGRQVF RTVA+WM +TC+ E   SNR+ GGLL RLGY+RRRGRIKTPPL+A+R ARIR F VE+D+AKRAED GLA IVYMDESFVHQ HGSPYSY  +D+DGVVQ+GIGRTTGKGL MIMVH ITKWG L +  +   +E+GWFK T++G+ +       M+DEE AEFLWQ KLA GDYHAAM DS+FMEWLE R  PA+ A+
Sbjct:    5 INNHWWDHRQLYGTTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHSTCNMEQP-SNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETDSGKKE-------MEDEETAEFLWQTKLATGDYHAAMTDSMFMEWLELRLNPAYNAI 251          
BLAST of mRNA_H-elongata_contig50132.12240.1 vs. uniprot
Match: A0A6H5JWS3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS3_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 4.760e-104
Identity = 167/250 (66.80%), Postives = 197/250 (78.80%), Query Frame = 1
Query:  472 QVSKTFKIGHEKVREVSNHWWNHRELYEPAGSRRGKVTKKGEKRCRLTQEQDEQLHEFINGEHKAGRQVFHRTVADWMCTTCSTETLLSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRFARIRLFFVEIDIAKRAEDTGLAFIVYMDESFVHQGHGSPYSYVLTDDDGVVQNGIGRTTGKGLCMIMVHVITKWGSLVRPFEKFSLEKGWFKSTENGRGKQGGKEFKMKDEEKAEFLWQAKLAKGDYHAAM 1221
            QV++TFKIGH+KVR ++NHWW+HR+LYE     RGK  KK + R RLT+ Q++QL EFIN EH+AGRQV  RTVA+WM  TC+ E   SNR+ GGLL RLGY+RRRGRIKTPPL+A+R ARIR F VE+ +AKRAED GLA IVYMDESFVHQ HGSPYSY  +DDDGVVQ+GIGRTTGKGL MIMVH ITKWG L +  +   +E+GWFK T +G+ +       M+DEE AEFLWQAKLAKGDYHAAM
Sbjct:   32 QVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHQAGRQVSRRTVAEWMHRTCNMEQP-SNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDDDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETGSGKKE-------MEDEETAEFLWQAKLAKGDYHAAM 273          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50132.12240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMA8_9PHAE4.390e-13252.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNM6_ECTSI4.300e-12964.56DDE_3 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KAU4_9PHAE8.910e-12963.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIM5_9PHAE1.770e-12166.55DDE_3 domain-containing protein n=4 Tax=Ectocarpus... [more]
A0A6H5KKL0_9PHAE1.040e-11965.29DDE_3 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KDX7_9PHAE1.200e-11567.41DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KDX2_9PHAE7.470e-11354.90Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JR41_9PHAE3.150e-11066.67DDE_3 domain-containing protein n=5 Tax=Ectocarpus... [more]
A0A6H5JWX3_9PHAE9.710e-10765.49Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JWS3_9PHAE4.760e-10466.80Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50132contigH-elongata_contig50132:175..2596 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-08_006560.1
Exons2
Model size1999
Cds size879
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50132.12240.1prot_H-elongata_contig50132.12240.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig50132 878..2179 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930824.9503777-UTR-H-elongata_contig50132:174..8771622930824.9503777-UTR-H-elongata_contig50132:174..877Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50132 175..877 -
1691679586.4967785-UTR-H-elongata_contig50132:174..8771691679586.4967785-UTR-H-elongata_contig50132:174..877Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50132 175..877 -
1622930825.0111346-UTR-H-elongata_contig50132:2179..25961622930825.0111346-UTR-H-elongata_contig50132:2179..2596Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50132 2180..2596 -
1691679586.5239446-UTR-H-elongata_contig50132:2179..25961691679586.5239446-UTR-H-elongata_contig50132:2179..2596Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50132 2180..2596 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930824.9735649-CDS-H-elongata_contig50132:877..16991622930824.9735649-CDS-H-elongata_contig50132:877..1699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50132 878..1699 -
1691679586.5077639-CDS-H-elongata_contig50132:877..16991691679586.5077639-CDS-H-elongata_contig50132:877..1699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50132 878..1699 -
1622930824.9951417-CDS-H-elongata_contig50132:2122..21791622930824.9951417-CDS-H-elongata_contig50132:2122..2179Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50132 2123..2179 -
1691679586.51602-CDS-H-elongata_contig50132:2122..21791691679586.51602-CDS-H-elongata_contig50132:2122..2179Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50132 2123..2179 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig50132.12240.1

>prot_H-elongata_contig50132.12240.1 ID=prot_H-elongata_contig50132.12240.1|Name=mRNA_H-elongata_contig50132.12240.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=293bp
MLLFTLRKEGSSENKAVNQVSKTFKIGHEKVREVSNHWWNHRELYEPAGS
RRGKVTKKGEKRCRLTQEQDEQLHEFINGEHKAGRQVFHRTVADWMCTTC
STETLLSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRFARIRLFFVEIDIA
KRAEDTGLAFIVYMDESFVHQGHGSPYSYVLTDDDGVVQNGIGRTTGKGL
CMIMVHVITKWGSLVRPFEKFSLEKGWFKSTENGRGKQGGKEFKMKDEEK
AEFLWQAKLAKGDYHAAMIDSIFMEWLEHRFTPAFKALLKNR*
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mRNA from alignment at H-elongata_contig50132:175..2596-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig50132.12240.1 ID=mRNA_H-elongata_contig50132.12240.1|Name=mRNA_H-elongata_contig50132.12240.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2422bp|location=Sequence derived from alignment at H-elongata_contig50132:175..2596- (Himanthalia elongata Himel1 dioecious)
CTGACGATGGCGAAGGGAAAAAAACGACTGACCAATGTCGGTAGAGGCCG CCCACGGAGCGAGATCAAGAAGACCAAAACTGAAAGGGTGAGAGATGCCG TAGCTCTAGACAGACTTAGGGTTCAGCTGAACGTCCAGAAGGCGGCACTG TCAGCTACCTTGCTGAAGATCAAGGAGAGGGAAAACGCTACTAAGGTGAA GGAGCGTGGTATTACAAAGAAGGAGGCAGATATTTCCCGCGCAACCACAA AGCGTGTAGCGGATGGACAGCGAGAAAATGAGTTGATCGAAGCGGCCGCC CAAACCTCCAACTCAAGGCTTTTAGAGTTCAGCCTTGACTTCATCAACAA TTCTCTAGAGAATCTGAAGCCTAAGACTGAACAAATTTTGTGCAAGACCT AGTCCAGGCTGATCCTAATGCTCCTGTTTACTCTTCGTAAAGAAGGAAGC TCTGAGAATAAGGCGGTGAACCAGGTCAGTAAAGCTACAGAGTTTCGGGT TTGCATGTGTAGCTGTGCGAAAAAAGGGGCGACTATAATATTGTATAAGA CTCATTCTTCAGAGTGCTTTCAGCGGTATCATTTACAGGAGTATATTGCT CATTGTAGACATTTTTCGAGCCCTTTTTAACTGCTGCTCGGTATTGATAC TTTCAGCTATATATTAGTAATATTTACATGCCCTTTCCCCCGTTCCAGTG TTATTGTGAAATATATGTCCTTCACAACACTGCTGTGTGTACGTGTTACC CGCTATTTTTTACTGCTTGGGGATACCGGTCTGTTCCTCCACTGCAGCTG GCTTTCGCGATCTTCTCTTTGTATGTACTTGCGAAAATGTTGCTGTGTGT TACGATGATCTCGCACTCATATGATCATACATCGCGCTGTCTTGCAGGTG TCGAAAACCTTCAAGATTGGTCACGAGAAAGTTAGGGAGGTGAGCAACCA TTGGTGGAATCACAGAGAGTTGTATGAGCCCGCCGGCAGCAGAAGAGGGA AGGTCACCAAGAAAGGCGAAAAGCGATGCCGCCTTACCCAAGAGCAAGAC GAACAACTTCACGAGTTTATCAACGGTGAGCACAAGGCCGGGCGCCAGGT GTTTCACCGGACGGTGGCGGATTGGATGTGTACGACTTGCAGCACGGAGA CTCTCTTGTCAAACCGCGCGGTAGGGGGGTTGCTGCAAAGGCTCGGATAT AGGCGCCGTAGAGGAAGAATCAAAACACCACCGTTGGATGCCAAAAGGTT TGCGCGCATTCGTTTGTTTTTCGTTGAAATAGACATAGCAAAACGAGCGG AAGATACGGGGTTGGCTTTTATTGTTTATATGGATGAGAGCTTCGTCCAC CAGGGACACGGTTCCCCGTACTCGTACGTTCTTACAGACGATGATGGAGT TGTGCAGAATGGGATCGGTCGCACAACGGGAAAGGGATTATGTATGATTA TGGTGCATGTAATCACCAAGTGGGGGTCGTTGGTTAGGCCCTTTGAGAAG TTTTCGCTCGAAAAGGGATGGTTCAAAAGTACGGAGAACGGCAGGGGAAA GCAAGGGGGAAAGGAATTCAAGATGAAAGATGAAGAAAAAGCTGAGTTTC TTTGGCAGGCGAAATTGGCAAAAGGCGATTATCACGCGGCCATGATCGAT TCTATCTTCATGGAGTGGCTTGAGCACCGCTTCACCCCGGCTTTCAAAGC TTTACTGAAAAACAGATGATCCTTATGCTGGACAACGCCTCGTACCATCA TGGCTTCGACGCTGAGGTTAAGGTACCCGAAACCAATACCAAGAAGCACA ATGTCCGATTGTTGCGTAAGTTTGGCGCGCAAGCGATCAAGGCTAAGCGT GTCGCTGCCAACAGTGCAGTGGTAGAGCACAGCATCGAAATACCAACAGA TCCTGGTACTTCATTCCCTAATATGCGACAGGAGGGCGGCATAAACAGAA AAGAGGTAGAAGTGGCTACTCGGGAGTACTTTCGCCTTAAACACCCTGAA AAGCTCGAAGAACGGGTGGTGACTTTCATGCAGAAGGCGGGTGGGAATTG ATTTGGACACCGCCTTACAAGCCCTTTTTCCAACCGATCGAGCTTTTTTG GCAGTATGGGAAGCAGTACGTAAGTCTCAACTTTAAGTTGAAACGAAATA TGCAGGAGATATGGGAGAAGATTCGTAAAATGTGGTATGGAGATCCGGAA TGGTCAGGCCAAAAGGGGGGCTGGAAGGCAGCTGATTGATATAAATTGGT TGCCCATGCCATTGGATATATGAACACGTGGATTAAAAATCGTGATGGAG TCCTAAGTGGTGCGATAGGCACGCTTTAAATTCAAGATGGATATGACAAG GACGATGTTTCACCAGTGAGTGATATCGAGGATGGGGTTGGGGAGCTCAT TGAAAACGAAAGAGACGAGTGG
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Coding sequence (CDS) from alignment at H-elongata_contig50132:175..2596-

>mRNA_H-elongata_contig50132.12240.1 ID=mRNA_H-elongata_contig50132.12240.1|Name=mRNA_H-elongata_contig50132.12240.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1758bp|location=Sequence derived from alignment at H-elongata_contig50132:175..2596- (Himanthalia elongata Himel1 dioecious)
ATGCTCCTGTTTACTCTTCGTAAAGAAGGAAGCTCTGAGAATAAGGCGGT
GAACCAGATGCTCCTGTTTACTCTTCGTAAAGAAGGAAGCTCTGAGAATA
AGGCGGTGAACCAGGTGTCGAAAACCTTCAAGATTGGTCACGAGAAAGTT
AGGGAGGTGAGCAACCATTGGTGGAATCACAGAGAGTTGTATGAGCCCGC
CGGCAGCAGAAGAGGGAAGGTCACCAAGAAAGGCGAAAAGCGATGCCGCC
TTACCCAAGAGCAAGACGAACAACTTCACGAGTTTATCAACGGTGAGCAC
AAGGCCGGGCGCCAGGTGTTTCACCGGACGGTGGCGGATTGGATGTGTAC
GACTTGCAGCACGGAGACTCTCTTGTCAAACCGCGCGGTAGGGGGGTTGC
TGCAAAGGCTCGGATATAGGCGCCGTAGAGGAAGAATCAAAACACCACCG
TTGGATGCCAAAAGGTTTGCGCGCATTCGTTTGTTTTTCGTTGAAATAGA
CATAGCAAAACGAGCGGAAGATACGGGGTTGGCTTTTATTGTTTATATGG
ATGAGAGCTTCGTCCACCAGGGACACGGTTCCCCGTACTCGTACGTTCTT
ACAGACGATGATGGAGTTGTGCAGAATGGGATCGGTCGCACAACGGGAAA
GGGATTATGTATGATTATGGTGCATGTAATCACCAAGTGGGGGTCGTTGG
TTAGGCCCTTTGAGAAGTTTTCGCTCGAAAAGGGATGGTTCAAAAGTACG
GAGAACGGCAGGGGAAAGCAAGGGGGAAAGGAATTCAAGATGAAAGATGA
AGAAAAAGCTGAGTTTCTTTGGCAGGCGAAATTGGCAAAAGGCGATTATC
ACGCGGCCATGATCGATTCTATCTTCATGGAGTGGCTTGAGCACCGCTTC
ACCCCGGCTTTCAAAGCTTTACTGAAAAACAGATGAGTGTCGAAAACCTT
CAAGATTGGTCACGAGAAAGTTAGGGAGGTGAGCAACCATTGGTGGAATC
ACAGAGAGTTGTATGAGCCCGCCGGCAGCAGAAGAGGGAAGGTCACCAAG
AAAGGCGAAAAGCGATGCCGCCTTACCCAAGAGCAAGACGAACAACTTCA
CGAGTTTATCAACGGTGAGCACAAGGCCGGGCGCCAGGTGTTTCACCGGA
CGGTGGCGGATTGGATGTGTACGACTTGCAGCACGGAGACTCTCTTGTCA
AACCGCGCGGTAGGGGGGTTGCTGCAAAGGCTCGGATATAGGCGCCGTAG
AGGAAGAATCAAAACACCACCGTTGGATGCCAAAAGGTTTGCGCGCATTC
GTTTGTTTTTCGTTGAAATAGACATAGCAAAACGAGCGGAAGATACGGGG
TTGGCTTTTATTGTTTATATGGATGAGAGCTTCGTCCACCAGGGACACGG
TTCCCCGTACTCGTACGTTCTTACAGACGATGATGGAGTTGTGCAGAATG
GGATCGGTCGCACAACGGGAAAGGGATTATGTATGATTATGGTGCATGTA
ATCACCAAGTGGGGGTCGTTGGTTAGGCCCTTTGAGAAGTTTTCGCTCGA
AAAGGGATGGTTCAAAAGTACGGAGAACGGCAGGGGAAAGCAAGGGGGAA
AGGAATTCAAGATGAAAGATGAAGAAAAAGCTGAGTTTCTTTGGCAGGCG
AAATTGGCAAAAGGCGATTATCACGCGGCCATGATCGATTCTATCTTCAT
GGAGTGGCTTGAGCACCGCTTCACCCCGGCTTTCAAAGCTTTACTGAAAA
ACAGATGA
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