mRNA_H-elongata_contig499.12209.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig499.12209.1
Unique NamemRNA_H-elongata_contig499.12209.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig499.12209.1 vs. uniprot
Match: D7FY66_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY66_ECTSI)

HSP 1 Score: 483 bits (1242), Expect = 2.730e-164
Identity = 245/298 (82.21%), Postives = 267/298 (89.60%), Query Frame = 3 
Query:  117 RQADPGHEGDDANAQDGEGAEDVMFSCRVDNAKAITTILSCLSHGTRKGQQAQCEVTGEAMTLVVSGKAKYTQAQAVLESSLFQDYYCGEGAKFGINLTTLLECLQIFGPGSLAQTSVCMAYEEARALFRLTLEEAGVFTSCEIRTIHQDEEAMEFSALAKAFSASSEVCRCILKSDFLKEAFQELADLNGATSVAVTFGQEAPHLQLSAKGALGSSEIDFPKTSEAFVCFECSASRVSWTFLMSGMETGMRALPHANETYFRVNGEGILCIQHQIPMSMGQMSFVDVLLCPDVQESD 1010
            R   PG  G+    ++ E +++V+FSCR+DNAK+ITTILSCLSHGTRK QQAQCEVT E+MTLVVSG+AKYTQAQ  L+SSLFQ+Y C EGAKFGINLTTLLECLQIFGPGSLAQTSV MAY+EARA FRLTLEE GVFTSCEIRTIHQDEEAMEFS LAKAF  S EVCRCILKS+ LKEAFQELADLNGATSV+VTFGQEAPHLQLSAKG+ GSSEIDFPK+SEAFVCFEC+A RVSWT+LM+GMETGMRAL HANETYFRVN EGILCIQHQIPMSMGQ SFVDVLLCPD+QE D
Sbjct:   94 RHHGPGQRGE----EEDEESDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQEMD 387
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BLAST of mRNA_H-elongata_contig499.12209.1 vs. uniprot
Match: A0A6H5JRH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH0_9PHAE)

HSP 1 Score: 410 bits (1055), Expect = 6.300e-138
Identity = 213/276 (77.17%), Postives = 236/276 (85.51%), Query Frame = 3 
Query:  117 RQADPGHEGDDANAQDGEGAEDVMFSCRVDNAKAITTILSCLSHGTRKGQQAQCEVTGEAMTLVVSGKAKYTQAQAVLESSLFQDYYCGEGAKFGINLTTLLECLQIFGPGSLAQTSVCMAYEEARALFRLTLEEAGVFTSCEIRTIHQDEEAMEFSALAKAFSASSEVCRCILKSDFLKEAFQELADLNGATSVAVTFGQEAPHLQLSAKGALGSSEIDFPKTSEAFVCFECSASRVSWTFLMSGMETGMRALPHANETYFRVNGEGILCIQHQI 944
            R  DPG  G     ++ E +++V+FSCR+DNA++ITTILSCLSHGTRK QQAQCEVT E+MTLVVSG+AKYTQAQ  L+SSLFQ+Y C EGAKFGINLTTLLECLQIFG GSLAQTSV MAY+EARA FRLTLE  GVFTSCEIRTIHQDEEAM+FS LAKAF  S EVCRCILK     EAFQELADLNGATSV+VTFGQEA HLQL AKG+ GSSEIDFPK+S++ VCFEC+A  VSW FLM+GMETGMRAL HANETYFRVN EGILCIQHQ+
Sbjct:   15 RHHDPGQGG----VEEDEESDEVIFSCRLDNAESITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGRGSLAQTSVSMAYQEARATFRLTLEGGGVFTSCEIRTIHQDEEAMKFSTLAKAFGRSKEVCRCILKG----EAFQELADLNGATSVSVTFGQEATHLQLYAKGSNGSSEIDFPKSSQSLVCFECTARGVSWAFLMTGMETGMRALGHANETYFRVNEEGILCIQHQV 282
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BLAST of mRNA_H-elongata_contig499.12209.1 vs. uniprot
Match: A0A835YYW5_9STRA (Repair protein Rad1/Rec1/Rad17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW5_9STRA)

HSP 1 Score: 319 bits (818), Expect = 2.610e-101
Identity = 164/301 (54.49%), Postives = 213/301 (70.76%), Query Frame = 3 
Query:  111 ESRQADPGHEGDDANAQDGEGAEDVMFSCRVDNAKAITTILSCLSHGTRKGQQAQCEVTGEAMTLVVSGKAKYTQAQAVLESSLFQDYYCGE-GAKFGINLTTLLECLQIFGPGSLAQTSVCMAYEEARALFRLTLEEAGVFTSCEIRTIHQDEEAMEFSALAKAFSASSEVCRCILKSDFLKEAFQELADLNGATSVAVTFGQEAPHLQLSAKGALGSSEIDFPKTSEAFVCFECSASRVSWTFLMSGMETGMRALPHANETYFRVNGEGILCIQHQIPMSMGQMSFVDVLLCPDVQESD 1010
            E RQ   G E  +A   + E  E  +FSCR+DNA+A+TT+LSCLSHG+RK Q AQCE T E +T V++GKAK+TQAQ  L   LFQ Y C E G +FGINL+ LLECLQIFG    A  S  +AY    A F++TLEE GVFTSCE+RT+ ++ +AMEF+ALA AF +S E CRCI++S+ LKEAFQELADL GA S+     Q APHL+LS  G+ GSS I FP++SEAFV F C+   + W++ +S +E GMRALP A ET+ R+N EGI+CIQHQ+ ++ G  ++VD L+C +  + D
Sbjct:   10 EDRQEQHGAELPEAAEAEREAEEKDLFSCRIDNARAVTTVLSCLSHGSRKAQHAQCEATPEGLTFVITGKAKFTQAQGALSKDLFQAYECEEDGGRFGINLSMLLECLQIFGMN--ASASAALAYYPGTATFKVTLEENGVFTSCELRTLVEESDAMEFAALAAAFRSSPEECRCIIRSETLKEAFQELADLPGAASIVFEASQHAPHLKLSTSGSYGSSSIQFPRSSEAFVHFSCTPPSLRWSYALSALEGGMRALPFAQETFVRINEEGIMCIQHQVQVA-GHNTYVDFLICANTADID 307
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BLAST of mRNA_H-elongata_contig499.12209.1 vs. uniprot
Match: A0A6H5JQZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ4_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 3.170e-84
Identity = 154/234 (65.81%), Postives = 176/234 (75.21%), Query Frame = 3 
Query:  117 RQADPGHEGDDANAQDGEGAEDVMFSCRVDNAKAITTILSCLSHGTRKGQQAQCEVTGEAMTLVVSGKAKYTQAQAVLESSLFQDYYCGEGAKFGINLTTLLECLQIFGPGSLAQTSVCMAYEEARALFRLTLEEAGVFTSCEIRTIHQDEEAMEFSALAKAFSASSEVCRCILKSDFLKEAFQELADLNGATSVAVTFGQEAPHLQLSAKGALGSSEIDFPKTSEAFVCFECS 818
            R  DPG  G     ++ E +++V+FSCR+DNA++ITTILSCLSHGTRK QQAQCEVT E+MTLVVSG+AKYTQAQ  L+SSLFQ+Y C EGAKFGINLTTLLECLQIFGPGSLAQTSV MAY+E+           GV    E++  +   EAMEFS LAKAF  S EVCRCILKS+ LKEAFQELADLNGATSV+VTFGQEA HLQLSAKG+ GS     P +S       CS
Sbjct:   15 RHHDPGQGG----VEEDEESDEVIFSCRLDNAESITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQESDVPPHPG-RGRGVH---ELQDKNHPPEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEATHLQLSAKGSNGSRYAMAPPSSHGAPGSRCS 240
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BLAST of mRNA_H-elongata_contig499.12209.1 vs. uniprot
Match: A0A4D9CMN7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMN7_9STRA)

HSP 1 Score: 256 bits (655), Expect = 1.480e-77
Identity = 136/282 (48.23%), Postives = 181/282 (64.18%), Query Frame = 3 
Query:  177 EDVMFSCRVDNAKAITTILSCLSHGTRKGQQAQCEVTGEAMTLVVSGKAKYTQAQAVLESSLFQDYYCG-EGAKFGINLTTLLECLQIFGPGSLAQTSVCMAYEEARALFRLTLEEAGVFTSCEIRTIHQDEEAMEFSALAKAFSASSEVCRCILKSDFLKEAFQELADLNGATSVAVTFGQEAPHLQLSAKGALGSSEIDFPKTSEAFVCFECSASRVSWTFLMSGMETGMRALPHANETYFRVNGEGILCIQHQIPMSMGQMS-FVDVLLCPDVQESDMG 1016
            E+ +FSCR+D+ K IT  L+CLS G+RK Q AQ EV  E +  +V+G+AK+TQ+Q     +LFQ + C  EG  F I+L  LLECLQ+FG  SL  T + M+YE  +A  RLTLEE GV T+CE+R +   E+A + +ALA AF +  EV R ILKSD LKEA  EL+DL GA SV V+     P+  L+  G  G  EI  PK+SEAFV F+CS +R SW++ +  +  GMRAL  A ETY R+N EGI+C+QHQ+  +  + S F+D L   +  E   G
Sbjct:   14 EEPLFSCRIDSTKIITATLACLSDGSRKDQLAQVEVNNEGIVFIVTGRAKFTQSQGTFNRALFQAFQCQPEGGSFTIDLHLLLECLQVFGAASLTNTMLTMSYEPRKAALRLTLEEQGVLTTCEVRALEAGEDAFDLAALASAFRSRPEVLRAILKSDVLKEAISELSDLPGAGSVRVSVAPHEPNFHLATNGICGGLEIFLPKSSEAFVHFDCSEAR-SWSYGLGALNQGMRALTVAKETYVRINEEGIMCVQHQVENTASRQSTFIDFLCLAEETEEGRG 294
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BLAST of mRNA_H-elongata_contig499.12209.1 vs. uniprot
Match: A0A7S2WVI5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVI5_9STRA)

HSP 1 Score: 227 bits (579), Expect = 2.960e-66
Identity = 123/278 (44.24%), Postives = 177/278 (63.67%), Query Frame = 3 
Query:  186 MFSCRVDNAKAITTILSCLSHGT-RKGQQAQCEVTGEAMTLVVSGKAKYTQAQAVLESSLFQDYYCGEGAKFGINLTTLLECLQIFGPGSLAQTSVCMAYEEARALFRLTLEEAGVFTSCEIRTIH---QDEEAMEFSALAKAFSASSEVCRCILKSDFLKEAFQELADLNGATSVAVTFGQEAPHLQLSAKGALGSSEIDFPKTSEAFVCFECSASRVSWTFLMSGMETGMRALPHANETYFRVNGEGILCIQHQIPMSMGQMSFVDVLLCP-DVQE 1004
            +FSCR+++AK +  ++SCL+H   RK   A C+V  + +   ++ +AK  Q    L   +F  + C E   F +NL  +L+CL +FGP +++ T++ M Y +  A+F+LT+EE GVFT C+I+T+    QDE+  EFS L  +F    E C+ ILKS+FLKEA  EL DL+GA+ V V     APH QL+A G LG+ EI+FPK+SE FV F CS + + +T+ +  +  GMRAL  A ET  R+N  GI+CIQHQ+    G  SFVD L+CP D+Q+
Sbjct:   19 LFSCRLESAKELHALVSCLAHEKKRKEHIALCQVNDQGLNFSMNQRAKTIQVSGTLPRRVFSSFECHEHGAFCLNLGMVLDCLSLFGPAAISSTAIAMTYSKEDAVFQLTMEEHGVFTRCDIQTLDGSAQDED--EFSQLTSSFRRDPEACKLILKSEFLKEALYELQDLSGASFVDVFISPTAPHFQLAATGNLGTLEIEFPKSSELFVLFSCSEA-LRFTYRLEALIRGMRALLVAAETCVRINVVGIMCIQHQVQNHSGVTSFVDFLMCPADLQD 293
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BLAST of mRNA_H-elongata_contig499.12209.1 vs. uniprot
Match: A0A7S2G8B6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8B6_9STRA)

HSP 1 Score: 192 bits (487), Expect = 3.220e-53
Identity = 101/272 (37.13%), Postives = 159/272 (58.46%), Query Frame = 3 
Query:  219 ITTILSCLSHGTRKGQQAQCEVTGEAMTLVVSGKAKYTQAQAVLESSLFQDYYC-GEGAKFGINLTTLLECLQIFGPGSLAQTS--VCMAYEEARALFRLTLEEAGVFTSCEIRTIHQD---EEAMEFSALAKAFSASSEVCRCILKSDFLKEAFQELADLNGATSVAVTFGQEAPHLQLSAKGALGSSEIDFPKTSEAFVCFECSASRVSWTFLMSGMETGMRALPHANETYFRVNGEGILCIQHQIPMSMGQMSFVDVLLCPDVQESDMG 1016
            I ++L C+ +GTRK Q AQC+V    ++  +  +++ TQ    ++ + F ++ C  +G  F IN+ TLL+CL IFGP      S  V M++++      L L+E GVFT C+I+ I  D   E    F+  +  F      C+CI+KS+ LKEA  EL DLN AT ++V    +APH Q+SA+G+LG  +I+FP++S+ F  FEC+ + +   +       GMRAL  + E+YFR+N  G+LCIQH +    G   F+D ++ P++ + + G
Sbjct:    1 IQSMLQCIVNGTRKDQHAQCQVHAGGISFSLQSRSRTTQVTGTMDKNCFTEFECYDDGGTFCINICTLLDCLSIFGPQQAGTNSTVVTMSFDKNLCQLILNLDEDGVFTRCDIQAIENDGDEEVGARFAQFSDEFRQKPSPCKCIVKSEQLKEALNELRDLNNATRLSVLLSPQAPHFQISAQGSLGFLDIEFPRSSDLFELFECTET-MKTEYDYDSFVQGMRALTVSEESYFRINEGGLLCIQHHVETHGGGRCFIDFIMLPNIADCETG 271
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BLAST of mRNA_H-elongata_contig499.12209.1 vs. uniprot
Match: A0A7S0XDK7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDK7_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.050e-41
Identity = 82/205 (40.00%), Postives = 128/205 (62.44%), Query Frame = 3 
Query:  384 EGAKFGINLTTLLECLQIFGPGSLAQTSVCMAYEEARALFRLTLEEAGVFTSCEIRTIHQDEEAMEFSALAKAFSASSEVCRCILKSDFLKEAFQELADLNGATSVAVTFGQEAPHLQLSAKGALGSSEIDFPKTSEAFVCFECSASRVSWTFLMSGMETGMRALPHANETYFRVNGEGILCIQHQIPMSMGQMSFVDVLLCPDV 998
            E  +  INLTT ++CL +FG  SL  T+  + Y    AL +L+LE++G+ T+C+I T++ D        L  AF +S+E+C+ ILKS+ LKEA  +L+D+ GAT+VA+   +   +L     G +G  EI+FP+ S+ FV F C  S   WT+ ++ ++ GM+AL  + ET+ R+N EG++CIQHQI  + G   ++D L+  DV
Sbjct:   22 ERIRIFINLTTFVDCLLLFG-SSLETTAGTITYNSDDALLKLSLEDSGILTTCDISTLYMDNNEDIGYELFSAFLSSNELCQVILKSEILKEAMHDLSDVYGATTVAIEITKNPENLTFMTVGTMGECEIEFPRLSDLFVSFRCDKSS-KWTYPLTSLQLGMKALNISKETFIRMNEEGVICIQHQIETNRGHEIYIDYLMVSDV 224
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BLAST of mRNA_H-elongata_contig499.12209.1 vs. uniprot
Match: A0A8K1C6J7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6J7_PYTOL)

HSP 1 Score: 149 bits (375), Expect = 1.990e-36
Identity = 96/304 (31.58%), Postives = 152/304 (50.00%), Query Frame = 3 
Query:  177 EDVMFSCRVDNAKAITTILSCLSHGTRKGQQAQCEVTGEAMTLVVSGKAKYTQAQAVLESSLFQ--DYYCGEGAK----------------FGINLTTLLECLQIFGPGSLAQTSVCMAYEEARALFRLTLEEAGVFTSCEIRTIHQDEEAMEFSALAKAFSASSEVCRCILKSDFLKEAFQELADLNGATSVAVTF-----GQEAPH--LQLSAKGALGSSEIDFPKTSEAFVCFECSASRVS------WTFLMSGMETGMRALPHANETYFRVNGEGILCIQHQIPMSMGQMSFVDVLLCPD 995
            E  +  C  ++ K + T+LSCL  G +K Q+ +C++    M      K K  Q +  L S LF   ++   E ++                F +NL+ L+E L +FGP SL  +S+ ++Y    A   L +E+ GV   C ++ +  +   +       AF  S+ + RCI++S+ L +AF EL DL  A SVA+       G  + H  L LSA    GS EI+F ++S AF+ F C+    S       TF ++ ++   +AL H+NET+ R+N +G L +QH I    G  +FVD L+ P+
Sbjct:   42 EKPVLVCTSESVKLLVTLLSCLFQG-KKDQRIRCDIDSAGMLFTSHSKGKSLQIKTSLGSELFDTFEFRASETSQLDHDDEDDSQLDTQYSFALNLSALIESLSMFGPASLPTSSLRLSYFAESARLTLLVEDNGVICECAMQVLELESNDIAQLEFESAFEQSAVIGRCIMQSEPLHDAFAELYDLPSAASVAIAMYEDDEGPASSHKCLSLSATSETGSCEIEFARSSSAFIEFFCTNDETSDDGSASATFHVAVLQQAFKALGHSNETFLRMNADGFLSVQHMIESGSGDKAFVDALISPE 344
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BLAST of mRNA_H-elongata_contig499.12209.1 vs. uniprot
Match: A0A7S4S9E9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S9E9_9STRA)

HSP 1 Score: 150 bits (378), Expect = 7.550e-35
Identity = 109/361 (30.19%), Postives = 172/361 (47.65%), Query Frame = 3 
Query:  174 AEDVMFSCRVDNAKAITTILSCLSHGT-----------------------------RKGQQAQCEVTGEAMTLVVSGKAKYTQAQAVLESSLFQDYYCGE----------------------------------------GAKFGINLTTLLECLQIFGPGSLAQTSVCMAYEEARALFRLTLEE------------AGVFTSCEIRTIHQDEEAMEFSALAKAFSASSEVCRCILKSDFLKEAFQELADLNGATSVAVTFGQEAPHLQLSAKGALGSSEIDFP------KTSEAFVCFECSASRV-SWTFLMSGMETGMRALPHANETYFRVNGEGILCIQHQI--PMSMGQMSFVDVLL 986
            + D++FSCR ++AKAI+T+LSCL H +                             +K Q A   VT  ++T  V G AK +QA   ++S LF D+Y                                           G +FGINLTT+LECL + G  SL +T VC++Y  + A+F++ L E            +GV ++C I  +   EE   FS+LA AF +S  V R ILKS+++++A  +L D+ GAT+V V  G     ++L+  G+ G   +  P      K  + FV  EC+  ++ + ++ +  +  GMR L   +ET   +NG G++ IQHQ+   +  G+ +FVD ++
Sbjct:   68 SNDLLFSCRCESAKAISTLLSCLRHVSSSSATAADISFHTSTLSQRVVRSSTTTTQKKAQHATVFVTQSSLTFHVHGMAKMSQASVDMQSGLFSDFYVSREEIPYDDDDXXXXXXXXXXXXXXXSPTQNPASQPKTQVVYGGEFGINLTTVLECLHVLGTHSLDKTKVCLSYNTSTAIFQMELLEDFASSTTTHGGSSGVLSTCAIPGLAVSEEEEHFSSLAVAFRSSPIVARAILKSEYIRDAMGDLNDVVGATTVTV--GISPRGMELATIGSFGECLLSLPHLPTPEKEDQVFVSLECTPRKLHANSYPLHLLFMGMRGLEIGSETCVSMNGRGMMAIQHQVLDMVGDGKPNFVDFIM 426
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig499.12209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY66_ECTSI2.730e-16482.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRH0_9PHAE6.300e-13877.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YYW5_9STRA2.610e-10154.49Repair protein Rad1/Rec1/Rad17-domain-containing p... [more]
A0A6H5JQZ4_9PHAE3.170e-8465.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9CMN7_9STRA1.480e-7748.23Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2WVI5_9STRA2.960e-6644.24Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2G8B6_9STRA3.220e-5337.13Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0XDK7_9STRA1.050e-4140.00Hypothetical protein (Fragment) n=2 Tax=Chromulina... [more]
A0A8K1C6J7_PYTOL1.990e-3631.58Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S4S9E9_9STRA7.550e-3530.19Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig499contigH-elongata_contig499:2427..9042 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score488.0
Seed ortholog evalue3.4e-135
Seed eggNOG ortholog2880.D7FY66
Preferred nameRAD1
KEGG koko:K02830,ko:K05665
KEGG TC3.A.1.208.8
KEGG Pathwayko01523,ko02010,ko04071,ko04111,ko04113,ko04218,ko04977,ko05206,map01523,map02010,map04071,map04111,map04113,map04218,map04977,map05206
GOsGO:0000003,GO:0000075,GO:0000076,GO:0000077,GO:0000228,GO:0000278,GO:0000280,GO:0000723,GO:0000785,GO:0000792,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0004518,GO:0004527,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006278,GO:0006281,GO:0006289,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006996,GO:0007004,GO:0007049,GO:0007093,GO:0007095,GO:0007127,GO:0007131,GO:0007154,GO:0007165,GO:0007346,GO:0008150,GO:0008152,GO:0008219,GO:0008408,GO:0008630,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010389,GO:0010564,GO:0010639,GO:0010833,GO:0010948,GO:0010972,GO:0012501,GO:0016043,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0022402,GO:0022414,GO:0023052,GO:0030896,GO:0031570,GO:0031572,GO:0031573,GO:0031974,GO:0031981,GO:0032200,GO:0032991,GO:0033043,GO:0033313,GO:0033314,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0035825,GO:0035861,GO:0040020,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044773,GO:0044774,GO:0044818,GO:0045786,GO:0045835,GO:0045930,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051276,GO:0051321,GO:0051445,GO:0051447,GO:0051598,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0060249,GO:0061982,GO:0065007,GO:0065008,GO:0070013,GO:0071214,GO:0071478,GO:0071479,GO:0071704,GO:0071840,GO:0071897,GO:0090304,GO:0090305,GO:0090734,GO:0097159,GO:0097190,GO:0097193,GO:0104004,GO:0140013,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902749,GO:1902750,GO:1903046,GO:1903047,GO:1990421,GO:2000241,GO:2000242
EggNOG free text desc.exodeoxyribonuclease III activity
EggNOG OGsKOG3194@1,KOG3194@2759
EC3.1.11.2
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRad1/Rec1/Rad17
Ec32 orthologEc-24_003630.1
Exons9
Model size1732
Cds size984
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930821.7001662-UTR-H-elongata_contig499:2426..24881622930821.7001662-UTR-H-elongata_contig499:2426..2488Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig499 2427..2488 +
1691679584.9742491-UTR-H-elongata_contig499:2426..24881691679584.9742491-UTR-H-elongata_contig499:2426..2488Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig499 2427..2488 +
1622930821.718501-UTR-H-elongata_contig499:3552..35911622930821.718501-UTR-H-elongata_contig499:3552..3591Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig499 3553..3591 +
1691679584.9844556-UTR-H-elongata_contig499:3552..35911691679584.9844556-UTR-H-elongata_contig499:3552..3591Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig499 3553..3591 +
1622930821.8693337-UTR-H-elongata_contig499:8395..90421622930821.8693337-UTR-H-elongata_contig499:8395..9042Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig499 8396..9042 +
1691679585.0873241-UTR-H-elongata_contig499:8395..90421691679585.0873241-UTR-H-elongata_contig499:8395..9042Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig499 8396..9042 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930821.7317045-CDS-H-elongata_contig499:3591..36511622930821.7317045-CDS-H-elongata_contig499:3591..3651Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 3592..3651 +
1691679584.9920404-CDS-H-elongata_contig499:3591..36511691679584.9920404-CDS-H-elongata_contig499:3591..3651Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 3592..3651 +
1622930821.745486-CDS-H-elongata_contig499:4329..44491622930821.745486-CDS-H-elongata_contig499:4329..4449Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 4330..4449 +
1691679585.0095081-CDS-H-elongata_contig499:4329..44491691679585.0095081-CDS-H-elongata_contig499:4329..4449Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 4330..4449 +
1622930821.763738-CDS-H-elongata_contig499:4945..51521622930821.763738-CDS-H-elongata_contig499:4945..5152Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 4946..5152 +
1691679585.0221696-CDS-H-elongata_contig499:4945..51521691679585.0221696-CDS-H-elongata_contig499:4945..5152Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 4946..5152 +
1622930821.7790673-CDS-H-elongata_contig499:5707..57821622930821.7790673-CDS-H-elongata_contig499:5707..5782Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 5708..5782 +
1691679585.0323808-CDS-H-elongata_contig499:5707..57821691679585.0323808-CDS-H-elongata_contig499:5707..5782Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 5708..5782 +
1622930821.7993624-CDS-H-elongata_contig499:6221..63141622930821.7993624-CDS-H-elongata_contig499:6221..6314Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 6222..6314 +
1691679585.0421379-CDS-H-elongata_contig499:6221..63141691679585.0421379-CDS-H-elongata_contig499:6221..6314Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 6222..6314 +
1622930821.816278-CDS-H-elongata_contig499:6636..67461622930821.816278-CDS-H-elongata_contig499:6636..6746Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 6637..6746 +
1691679585.056093-CDS-H-elongata_contig499:6636..67461691679585.056093-CDS-H-elongata_contig499:6636..6746Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 6637..6746 +
1622930821.8355556-CDS-H-elongata_contig499:7266..74411622930821.8355556-CDS-H-elongata_contig499:7266..7441Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 7267..7441 +
1691679585.0689058-CDS-H-elongata_contig499:7266..74411691679585.0689058-CDS-H-elongata_contig499:7266..7441Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 7267..7441 +
1622930821.852297-CDS-H-elongata_contig499:8251..83951622930821.852297-CDS-H-elongata_contig499:8251..8395Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 8252..8395 +
1691679585.0781062-CDS-H-elongata_contig499:8251..83951691679585.0781062-CDS-H-elongata_contig499:8251..8395Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 8252..8395 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig499.12209.1prot_H-elongata_contig499.12209.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig499 3592..8395 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig499.12209.1

>prot_H-elongata_contig499.12209.1 ID=prot_H-elongata_contig499.12209.1|Name=mRNA_H-elongata_contig499.12209.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=328bp
MPRESRQADPGHEGDDANAQDGEGAEDVMFSCRVDNAKAITTILSCLSHG
TRKGQQAQCEVTGEAMTLVVSGKAKYTQAQAVLESSLFQDYYCGEGAKFG
INLTTLLECLQIFGPGSLAQTSVCMAYEEARALFRLTLEEAGVFTSCEIR
TIHQDEEAMEFSALAKAFSASSEVCRCILKSDFLKEAFQELADLNGATSV
AVTFGQEAPHLQLSAKGALGSSEIDFPKTSEAFVCFECSASRVSWTFLMS
GMETGMRALPHANETYFRVNGEGILCIQHQIPMSMGQMSFVDVLLCPDVQ
ESDMGVLLVDSTGEGEEGGGLDPSRDR*
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mRNA from alignment at H-elongata_contig499:2427..9042+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig499.12209.1 ID=mRNA_H-elongata_contig499.12209.1|Name=mRNA_H-elongata_contig499.12209.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6616bp|location=Sequence derived from alignment at H-elongata_contig499:2427..9042+ (Himanthalia elongata Himel1 dioecious)
GGGCGACTTTCAGAGCGGCATGGAGCTATCGACACAAGCCACCATCGAAC
GTGGAACGAATTGTGAGCGAGTACTATGCCCGTGGCTCAAGTCCTTGTAT
TCGATAAATAAATAAAAAGTATACAGGATAAATGTGCCTGAGGGCTGCTG
GCTCATTGCGGTCGAACTCTCGATGGTCAACGCCATGGGTACGCAATTGC
GTATCCGATGGCGTTTGACGGTAAAGATGGACGCCGTAAACGAGAAAATC
CAGAAGATCCCGGGAGTACGCACCAGATTAAGCCTGGGTTTGGAGAACGA
ACGGGCTGGCGTGAGGCGGGACGGCCGAACCCGTTTCGTGAGACCAAATT
CTCAGGCGCTAACGAGACAGGGCAAATTCATTTTCCTTTTTTATCAAGTT
GCATTCCTGTTCAACTGACCACAAGCTACAAGCAGCAGGCAACAACTATT
GTGATTGCCGCACATCTCCCCAACGATTCTAAGGCTAACACGTATTTCTT
CTAGACGTACTCGATGGAAAATGTGAAAACCATTTACGTTGGATGACCAG
GTTTTGTAGATGGGCTACAACACGGTGCTAAGAAGGTGTGGGTGTTCGGT
GGGTTGGGATGAGTTCATATGTTTTTTTAGAAAATAACGCCAGAGCGCCA
CATGTGGTGTGCAGGATTCCTCCTTGGATACCCATGGACCATCAGAATTA
CATGAGCTCGAGAAGCCCTCCGTGGTACAGTAGACGGACGTCAAATTCGA
GCTTTTCTTCAAAGTAGATAAACCCCTGACCCTTGCGGTTCGTCGTTAGC
AAAGCGTCGTCCATCATAGAGTAACGCAACTCTTCATACTGTACGATGTT
TCTTTTTCTAGTCGAGTGCTGATTTGAATGGCAAGTTGAAAGGGGGGTAT
TGATTGATTAATTATTTGGTTGATTGATGGTCACACTAACAGCCGACCGG
TCAACTAGCTGGTGGCCAATCCCGCTCGCGGTCAGATAGATAACTAGATT
AATACTTTTTTACTGTTTGTTCACCCAGAGACACAGGCGATCACAGCTTT
CGCAGTCCTTTCACCGAATATACTGTTGTACCTCAAAACGCCATACGTCT
CGCCGATCTGGTTTCTCTCGTGGCAGTCAAGCGCAACTGCGGGGTGGACA
TCCGATCACGGGGACATGCCTCGTGAATCTAGACAAGCCGATCCGGGGCA
CGAGGGGGATGATGCTAACGCGCAGGTACAGAGAATAAACACGCGTCGGC
TCTTAGCCCTTGTACCAATCGTCATTTTCCCCGATTACGAACAATGGGGC
TATCCAATGTGTCAGGTTACCATTCCCACACACTTTTACGTTGCCCATCC
CGCCATGCCTTATTAAACGTCCAAATGATCTATTAATAGTTAATAACTCA
TTTTATCGTAACAGTACAAACACGGCAAATCAATAGTGTTATTTTGCTCT
CTAGTTGTTCTCACCTTCTGACGCTTTCAATTCCGGAAATTAGAGGAAGG
GAACCAACCACACAGTCGATGACATGGAACTCTCAAATTTCGCATAACTT
TCAAGGGGAGATGTTGTATACAGCTTGACTAGTCGTGCAGTTGATTGAGG
TCAACTGGTGTGGCCGAACATTGTCGGCTCGATGCCTGTTGCAATTTAGA
AAATGAAAATAAAAGCTTACAACGCTAGTGTCAGATGCCGAGGAGGTCAG
AACGCCTACTCCTCGCGGTTGAGGTAGGTTGGCTAGTTCTGACGTATGCA
TGGATAGCGACTGAGAACAGCCATGAGTGCGGTGCGTGAGATGTGATGCA
CCGCTCAACGTCTAAGAGCTCTAGATTCATAATTTCGCCCAAGGGCTCAC
AGTAGATGTATTTCGGATTCATTCGAGCGGCTCTCCTTCGCACACCACCC
CAGGACGGGGAGGGTGCCGAGGACGTGATGTTCTCGTGCCGCGTGGATAA
CGCCAAGGCCATCACCACCATCCTATCCTGCCTTAGCCACGGAACGCGCA
AGGGACAACAGGCGCAGTGTGAGGTGCGCTAATTAAAACAGGATACATGA
AGCCTGTCGATTAACGCCGCAGTTGGACACGTTATCGTAAAAAGCGTTCT
TGGGTTTTTTACAGGCTATAGTACTTCTAAACGTGTACTGATAACGTAGC
AGCGGAACTAGTAAAACAAATGCGTCCCCTATACGTAGAGATGTACTCGT
AGAGTGCGTCTTCGGTACCGAATCAGGCTTTCTGGAAGCAACCACGAGAG
CGAGTGCTCCACGTTGTTCGCTTTGCGTGGACCCCAAGGGCCCAGCCTCG
GTTACCGTAAGAGATACATTCATTCTTTATTTTAAGGATATGATTAGTCA
TGATGCTATAAAGAAATGGCTATTTCCTGCTTGTGGGGAGCAAGCGGGGC
GTCGTCAAGGTGTGATACAATTTTCACCACGCGTCCTCGGTAGGGATGAC
GTAGCATTGGGGGGACGTCATGAAGCTTACGACAAATCTGCGTTTTATGT
TTTATTCTTGTCTGCCCAGGTGACTGGCGAAGCCATGACGCTCGTAGTTT
CTGGCAAGGCCAAGTACACCCAGGCGCAGGCCGTTCTCGAGAGTAGCTTG
TTTCAGGACTACTACTGCGGAGAAGGGGCGAAGTTTGGCATCAATCTCAC
GACGCTGCTGGAGTGCCTTCAGATCTTTGGTCCGGGTTCGCTTGCTCAGA
CCAGCGTTTGTATGGCCTACGAGGAGGTGCGATAATCATGTCCCCGCGTG
TGCGCTCCGCATAAACGGTCCACCCTCGAGAATCGCCCACGGGCCGTCTC
TGTTATCGAAACGCCGTTTCGCTCCTCACGCGTGGATCTGAAGAAGGAAC
GCGTCGACCGGTCGATCGGTCAGCCATGATGGCCTCTGTTCCATCCGATC
TACCCGATGTCGTTTATTATGGAATGCTTATCGCGGAAGACGGGGTCATT
TACCTGTGTTGTATCGACCGTGCGACCGCGATTAGAAGAATAGAACAAAG
CAATACGGGCCATGCTCGTCACCTACGCGCGCCTGGCAATGTTTGCTGCG
TGCGCTCCTCAAGATCAGCGGTAAGGCAGGCGCTCCTGTTCTCGAAGCAG
GAATGCCTAATAATAGCTCGTCTTCGGCGAGAAAATGCTGCTCGCTATCG
CTGTTCTTCAAAATCGCACTTCTAAGAAACACAGCAGCAAGTGCTCGAGG
GCGACCCATTATTCATCTTGCTTCAGCGCGCGTTACGTTCCTTCAGACCA
TCGGCAATTCTCGACATATCATGCTCCTCAGGCTCGAGCCCTCTTTCGCT
TGACTCTGGAAGAGGCGGGGGTGTTCACTAGCTGCGAAATACGTACCATC
CATCAGGTAATGAAAGAGAAGAGAACGGCAACTTTTACTGCGGTCAATCA
TTCGATGATCGTGTCATGTATTTCCGCGCGAGCCCCTGGCATGTTCCCGT
CTCTGTGTAACTTCGTGTTTTGATCCTTATTGAAGAATGCGAAGTGGAGC
ATCGGTTTTCGGCGCTGCATCCCCAGACATTCTAATTTAATGCGGAGCAC
AAGGTTTCCCCTTTGTTTTGTCTTCCTCGCGTTGGCTGAACATCCGCTCC
CTTGGTCTCAACTTCGCGTATTAACAATCGCAGCTCGAGGCGGTATTGCC
GTCGCTGTCATCGGGATGAGTTCGTGAAACCCTTCGCGCATCTTTCCGAG
GATATGAATGTTGACGCGAGGAGAGACATCGCCTTTTTTCGTGCCCATGG
ATTGAGTCCAGAAAATCGTACGGATTTCGATAACATACTGCCCAGGACGA
GGAGGCGATGGAGTTTTCGGCGCTTGCGAAGGCGTTTAGCGCGAGCAGCG
AAGTCTGTCGGTGCATTCTCAAGTCAGATTTTCTCAAGGTGGGGGAGTTT
ACGCTTCGCAGCACTTCAGTATGCGTTCAAGTCATCAGGATTAAATGGTA
TCTTCGCAGACGCACACCCACAGCCGAACACTAAATAAAACCTTGGCAGG
TAGGGTACATTTGGTTCTCCGAGCCCCACCCTCGATGTGAATTATCCGTT
CAAGGTCTAGGTGCAATATCTTACACCAAATATACTCCTCGTTCTCGTTC
TCGAGCTGGAAGCCACGCGTAAGGGAACGCACGGCGTACACCTCACTAAA
CCGGTTTCCGCGACACAACACTGCTGTTTCTCTCTATCCATGTCTTCGTG
GGTGTCGCAGGAAGCTTTCCAGGAGCTGGCGGATCTGAACGGGGCGACCA
GTGTTGCTGTCACATTCGGCCAGGAGGCGCCTCACCTTCAGCTTTCCGCC
AAGGGAGCCCTCGGTTCCAGGTATAGTACAGACCTAATAGCAAGCACCGC
AGTTTATCGCGGAATCTTTGATTTTCACGAGTGTCTATTATAGCTTAGCT
GCAGTTTTTCGACAGGTGAACGATTAGTTCGTGATCTGTTGGCATACAAT
ACCGAGTGAGAACGGGATCAGTCAACTAACTGACTAAGCTATGTTGTGCG
CAAGATATTTGACAGCCACGTTTGTTCCATACAGTAATAGCTGTAGGAAT
ATGCATATCTTACGGACGTTTGTCCTGTTTCTTCACTGCGCCCCTGGTGA
ATTTTTGCTTATGGCTCGAGATGTCAAGCATGCAGCATTTGATTGCTTCA
CGATACAAGGTTGCTGATGTAGCATGCAGTGGGGCTTCCCGAGGCTCCGA
GTTCTGACAAATAATCTCTTTATCCCCCCCCTCCCCCCGAAAAGCAGGGG
TCAATCAAAGCATTTTTAACTCTCCGAGATACGAGAAGCATCGTAGTCGA
ATTAAACTCGGCCCAACCTCTCCGTCCGACCCGTTCACAGCGAAATCGAC
TTTCCCAAGACATCGGAGGCGTTCGTGTGTTTCGAGTGCAGCGCGTCGAG
GGTGTCTTGGACCTTCCTCATGTCAGGAATGGAGACCGGCATGAGAGCCC
TCCCTCACGCCAACGAGACCTACTTCCGTGTCAACGGCGAGGGCATCCTC
TGCATACAGCACCAGGCGAGCGCAGCTACCGTCAATATGTAGAGCTAATG
TCGCAGGTCATATAAATCAAACCAGCCCCTGGTGACGTCGAATTTATGCC
GTAGTCACATTTCTAGGACTCCGTACTTTCGAAAATCACTTATATTTAGT
CCAGAGTTCCCTCTGAAATAAATTCATCTCTGAAAACAAATACGAGGGTT
TGCCTCCCCGGGGTCCATTAAAGCCGGGGGGGATCTTCCCCATCAAAGCA
TGGTTGCCTAAGTTTTTACATGTCGCGCGTTTAACGCATCTATGCGGTAT
CATTTGCGGTGAGAGGGCGTTCAAACGGAGCCGAAAGCGAAAGGGGCGCG
GTAGTATACCCGATTGCTGCCATGGTGATGCGCCTGAGTTGGAAGCAGAT
AATGCACAAGTAGAGTTCTATTTTGCTTTTCCTATTTTTGCGGTATGCGC
AAGATGTCTTAGATCGTTCGAGAGCACTGAAATGGGTGAGCCGAAGTGAG
GGCTTAATGAAAAAATGAAGTAAGTGGCCTCCCCTTATTATACATATACT
GTATATATATAATTAATAGTACATAAATGTATGTGTGTTTTTTCATCCCC
TCACCGAGAGGGCTTCGCATTTTTTCCGCCCCTTTCGGAAGGAGAGCCTT
CCTACTTCTCACCTTTAGCTAGTAATAGCCCTTCATGTCCGCTTCAGGTC
ATCGCCAGGAGTCCGATCGTAGCTTTTTGGAACAATGCATCGTATAAAAA
TTCAACCTTGTGTGTCTCCAAGCCCCCCACCCCCTCCCCCCCCCCTAACC
TCCACCTTTGTCGATGTATTCGCAGATCCCCATGAGCATGGGACAGATGA
GCTTCGTAGACGTGCTACTATGCCCCGACGTGCAAGAGAGCGATATGGGC
GTACTTTTAGTAGATAGTACTGGAGAGGGTGAGGAAGGGGGAGGCTTGGA
TCCTAGTCGTGATCGATGACAGCGGGACGCCTCCTGGCCCGATCGGGATC
TGCATGTTGCTGTTCACTACGCCGTACGATGCCGCCGTTTGCCCTCCATC
GTGGTTGATTCTGTTAACAACTACTTGATAGATTTTTGTCATCGCTGGAT
TAGCCACCGCGGCTGCCCGTTACGTATCATAAAGAGAACGAATTATGTAG
TTGCGTATGGTGCCTTGACTGACCCTCTCCATGCCCGCGTCCCGATAGCC
ACATGCAGTTCGTTAAGAACTGTGAGTGTTGTCTTTCTTGTGTTATTATT
TTTTCTTTGGAGCTGTCGCATTTCCGAGTACTTGCATTGTACACCATTAT
TGCCGTTTCCTTTTGTATTGGAAAGTAGCTTGAACGTTTTTCTCCTTTCG
GATGGTGTTTTTTCTACCTTGTGACCACGGGCTGGATTTTGACATCAGCT
TTTGTGAGAATTCAATCAAAATTAATCAATAGTAGACTATGAAGAATGCT
TTTTCTTAACTCTGGAGTACATTTTCGCTGTTTGTATCAATTAACGCGCA
CGAAGCAATCCGAACTGCGCTCTACCTTTCTTTTGCGCTGTCAAGAATGA
GGCTGCTGGGGTAAAATGATGTCTCACACCCTGCGGCCATTTAAAGATTA
CGGAGGATCGAAGGGC
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Coding sequence (CDS) from alignment at H-elongata_contig499:2427..9042+

>mRNA_H-elongata_contig499.12209.1 ID=mRNA_H-elongata_contig499.12209.1|Name=mRNA_H-elongata_contig499.12209.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1968bp|location=Sequence derived from alignment at H-elongata_contig499:2427..9042+ (Himanthalia elongata Himel1 dioecious)
ATGCCTCGTGAATCTAGACAAGCCGATCCGGGGCACGAGGGGGATGATGC
TAACGCGCAGATGCCTCGTGAATCTAGACAAGCCGATCCGGGGCACGAGG
GGGATGATGCTAACGCGCAGGACGGGGAGGGTGCCGAGGACGTGATGTTC
TCGTGCCGCGTGGATAACGCCAAGGCCATCACCACCATCCTATCCTGCCT
TAGCCACGGAACGCGCAAGGGACAACAGGCGCAGTGTGAGGACGGGGAGG
GTGCCGAGGACGTGATGTTCTCGTGCCGCGTGGATAACGCCAAGGCCATC
ACCACCATCCTATCCTGCCTTAGCCACGGAACGCGCAAGGGACAACAGGC
GCAGTGTGAGGTGACTGGCGAAGCCATGACGCTCGTAGTTTCTGGCAAGG
CCAAGTACACCCAGGCGCAGGCCGTTCTCGAGAGTAGCTTGTTTCAGGAC
TACTACTGCGGAGAAGGGGCGAAGTTTGGCATCAATCTCACGACGCTGCT
GGAGTGCCTTCAGATCTTTGGTCCGGGTTCGCTTGCTCAGACCAGCGTTT
GTATGGCCTACGAGGAGGTGACTGGCGAAGCCATGACGCTCGTAGTTTCT
GGCAAGGCCAAGTACACCCAGGCGCAGGCCGTTCTCGAGAGTAGCTTGTT
TCAGGACTACTACTGCGGAGAAGGGGCGAAGTTTGGCATCAATCTCACGA
CGCTGCTGGAGTGCCTTCAGATCTTTGGTCCGGGTTCGCTTGCTCAGACC
AGCGTTTGTATGGCCTACGAGGAGGCTCGAGCCCTCTTTCGCTTGACTCT
GGAAGAGGCGGGGGTGTTCACTAGCTGCGAAATACGTACCATCCATCAGG
CTCGAGCCCTCTTTCGCTTGACTCTGGAAGAGGCGGGGGTGTTCACTAGC
TGCGAAATACGTACCATCCATCAGGACGAGGAGGCGATGGAGTTTTCGGC
GCTTGCGAAGGCGTTTAGCGCGAGCAGCGAAGTCTGTCGGTGCATTCTCA
AGTCAGATTTTCTCAAGGACGAGGAGGCGATGGAGTTTTCGGCGCTTGCG
AAGGCGTTTAGCGCGAGCAGCGAAGTCTGTCGGTGCATTCTCAAGTCAGA
TTTTCTCAAGGAAGCTTTCCAGGAGCTGGCGGATCTGAACGGGGCGACCA
GTGTTGCTGTCACATTCGGCCAGGAGGCGCCTCACCTTCAGCTTTCCGCC
AAGGGAGCCCTCGGTTCCAGGAAGCTTTCCAGGAGCTGGCGGATCTGAAC
GGGGCGACCAGTGTTGCTGTCACATTCGGCCAGGAGGCGCCTCACCTTCA
GCTTTCCGCCAAGGGAGCCCTCGGTTCCAGCGAAATCGACTTTCCCAAGA
CATCGGAGGCGTTCGTGTGTTTCGAGTGCAGCGCGTCGAGGGTGTCTTGG
ACCTTCCTCATGTCAGGAATGGAGACCGGCATGAGAGCCCTCCCTCACGC
CAACGAGACCTACTTCCGTGTCAACGGCGAGGGCATCCTCTGCATACAGC
ACCAGCGAAATCGACTTTCCCAAGACATCGGAGGCGTTCGTGTGTTTCGA
GTGCAGCGCGTCGAGGGTGTCTTGGACCTTCCTCATGTCAGGAATGGAGA
CCGGCATGAGAGCCCTCCCTCACGCCAACGAGACCTACTTCCGTGTCAAC
GGCGAGGGCATCCTCTGCATACAGCACCAGATCCCCATGAGCATGGGACA
GATGAGCTTCGTAGACGTGCTACTATGCCCCGACGTGCAAGAGAGCGATA
TGGGCGTACTTTTAGTAGATAGTACTGGAGAGGGTGAGGAAGGGGGAGGC
TTGGATCCTAGTCGTGATCGATGAATCCCCATGAGCATGGGACAGATGAG
CTTCGTAGACGTGCTACTATGCCCCGACGTGCAAGAGAGCGATATGGGCG
TACTTTTAGTAGATAGTACTGGAGAGGGTGAGGAAGGGGGAGGCTTGGAT
CCTAGTCGTGATCGATGA
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