mRNA_H-elongata_contig4982.12202.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig4982.12202.1
Unique NamemRNA_H-elongata_contig4982.12202.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig4982.12202.1 vs. uniprot
Match: A0A6H5KD72_9PHAE (Lipoxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD72_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 1.300e-58
Identity = 105/171 (61.40%), Postives = 131/171 (76.61%), Query Frame = 2 
Query:    5 IGQVGWLKDFHTSRDKKAFLAKVLASWIYTASTLHAAVNFPQQSLMSFAPNTPGAMYAPPPLDKNERTFEDYLACLPGMKIATTQAVLGNTLGSVFHTRLGDYEMNHFGDKRVQGPLTTFRRHLEDIEDDIINESFQVVDAWRERGKDEKNAQNFAYYTLIPDCVPQSINI 517
            +G+V WL +   S D+K FLAKVLAS IY+AS LHAAVNFPQQ +MSF P+ P ++Y PPP DK ER+FE+YLA LP ++IA  Q V GN LG+VFHT+LGDY+ N F DKRVQ PL  F++ +EDIE D++NE+  VV +WR+RGK +K A NF Y TL+PD VPQSINI
Sbjct:  434 VGEVKWLAELENSTDQKVFLAKVLASLIYSASVLHAAVNFPQQPIMSFVPSNPPSIYVPPPTDKTERSFEEYLAYLPPLEIAAEQVVTGNILGTVFHTKLGDYDANQFSDKRVQAPLAKFQQAIEDIETDMVNENAFVVSSWRKRGKGKKAAANFGYTTLLPDKVPQSINI 604
[Close]
BLAST of mRNA_H-elongata_contig4982.12202.1 vs. uniprot
Match: D8LBX4_ECTSI (Lipoxygenase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX4_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 1.930e-56
Identity = 98/172 (56.98%), Postives = 133/172 (77.33%), Query Frame = 2 
Query:    2 DIGQVGWLKDFHTSRDKKAFLAKVLASWIYTASTLHAAVNFPQQSLMSFAPNTPGAMYAPPPLDKNERTFEDYLACLPGMKIATTQAVLGNTLGSVFHTRLGDYEMNHFGDKRVQGPLTTFRRHLEDIEDDIINESFQVVDAWRERGKDEKNAQNFAYYTLIPDCVPQSINI 517
            DIG+V WLKD++T+ DKKA +AKV+ASWIY+ASTLHAAVNFPQ+  MSF P+ PG++YAPPP+DK ERTF++++  LP M+IAT    +   LG +FHT+LG YE ++F D R+  PL  F++ +EDIEDD++ ++  VV  WR+RGK ++ A N AY TL+PD +PQSINI
Sbjct:  481 DIGKVYWLKDYYTTDDKKALIAKVIASWIYSASTLHAAVNFPQKPSMSFVPSCPGSVYAPPPIDKRERTFDEFMNYLPPMEIATIHVAMLTLLGDIFHTKLGQYETHNFDDDRIAEPLAKFQQAIEDIEDDLVADNADVVSGWRQRGKAKRAANNMAYTTLLPDNIPQSINI 652
[Close]
BLAST of mRNA_H-elongata_contig4982.12202.1 vs. uniprot
Match: A0A6H5JW78_9PHAE (Lipoxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW78_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 6.220e-54
Identity = 94/150 (62.67%), Postives = 116/150 (77.33%), Query Frame = 2 
Query:   68 KVLASWIYTASTLHAAVNFPQQSLMSFAPNTPGAMYAPPPLDKNERTFEDYLACLPGMKIATTQAVLGNTLGSVFHTRLGDYEMNHFGDKRVQGPLTTFRRHLEDIEDDIINESFQVVDAWRERGKDEKNAQNFAYYTLIPDCVPQSINI 517
            KVLAS IY+AS LHAAVNFPQQ +MSF P+ P ++Y  PP DK +R+FE+YLA LP ++IA  Q V GN LG+VFHT+LGDY+ N F DKRVQ PLT F++ +EDIE D+INE+  V  +WR+RGK +K A NF Y TL+PD VPQSINI
Sbjct:   17 KVLASLIYSASVLHAAVNFPQQPIMSFVPSNPPSIYVQPPTDKTKRSFEEYLAYLPPLEIAAEQVVTGNILGTVFHTKLGDYDANQFSDKRVQAPLTKFQQAIEDIETDMINENAFVASSWRKRGKGKKAAANFGYTTLLPDKVPQSINI 166
[Close]
BLAST of mRNA_H-elongata_contig4982.12202.1 vs. uniprot
Match: A0A6H5K920_9PHAE (Lipoxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K920_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 1.110e-53
Identity = 101/171 (59.06%), Postives = 130/171 (76.02%), Query Frame = 2 
Query:    5 IGQVGWLKDFHTSRDKKAFLAKVLASWIYTASTLHAAVNFPQQSLMSFAPNTPGAMYAPPPLDKNERTFEDYLACLPGMKIATTQAVLGNTLGSVFHTRLGDYEMNHFGDKRVQGPLTTFRRHLEDIEDDIINESFQVVDAWRERGKDEKNAQNFAYYTLIPDCVPQSINI 517
            +G+  WL ++  S DKK  LAKVLAS IY+ASTLHAAVNFPQ++ MSFAP+ P ++Y  PP DK ERTFEDYLA LP ++IAT Q +L   LG+VF+T LGDYE N F D+RV  PL  F++ LEDIE D+++E+  VV +WR+RGK+++ A NF Y TL+P+ VPQSINI
Sbjct:  506 VGEFKWLAEWDNSTDKKGLLAKVLASLIYSASTLHAAVNFPQKTTMSFAPSNPASVYVTPPTDKTERTFEDYLAYLPPLEIATRQVILFTFLGNVFYTTLGDYEANQFSDQRVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGKEKRAAANFGYTTLLPEKVPQSINI 676
[Close]
BLAST of mRNA_H-elongata_contig4982.12202.1 vs. uniprot
Match: A0A6H5JK40_9PHAE (Lipoxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK40_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 1.690e-22
Identity = 46/65 (70.77%), Postives = 58/65 (89.23%), Query Frame = 2 
Query:    2 DIGQVGWLKDFHTSRDKKAFLAKVLASWIYTASTLHAAVNFPQQSLMSFAPNTPGAMYAPPPLDK 196
            DI +V WLKD++T+ DKKAF+AKV+ASWIY+ASTLHAAVNFPQ+  MSF P+ PG++YAPPP+DK
Sbjct:   40 DIAKVYWLKDYYTTDDKKAFIAKVIASWIYSASTLHAAVNFPQKPSMSFVPSCPGSVYAPPPIDK 104
[Close]
BLAST of mRNA_H-elongata_contig4982.12202.1 vs. uniprot
Match: A0A835YNA1_9STRA (Lipoxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNA1_9STRA)

HSP 1 Score: 113 bits (282), Expect = 4.310e-22
Identity = 68/175 (38.86%), Postives = 98/175 (56.00%), Query Frame = 2 
Query:   14 VGWLKDFHT-SRDKKAFLAKVLASWIYTASTLHAAVNFPQQSLMSFAPNTPGAMYAPPPLDKNERTFEDYLACLPGMKIATTQAVLGNTLGSVFHTRLGDYEM----NHFG--DKRVQGPLTTFRRHLEDIEDDIINESFQVVDAWRERGKDEKNAQNFAYYTLIPDCVPQSINI 517
            V WL+D+     D +  L K++++ I+ AS  HAAVNFPQ  LM + P  P +MY PPP    E    DY+     M++A TQ  +G  LG+V HTRLG Y+M     +FG  +  +   L+ FR+ L+D    +   +  +V AW   G+ +K A+ ++Y  L PD VPQ INI
Sbjct:  554 VKWLEDWGAPGTDNRPLLKKLVSAVIFNASAQHAAVNFPQTPLMCYTPAFPLSMYDPPPSLATEPEAHDYVRLFAPMEVAKTQKNVGLLLGTVRHTRLGQYDMAPFRRYFGTDNSDLTAALSKFRKDLDDARRAVDRRNRDLVAAWTAAGEKKKVAECYSYTLLRPDKVPQGINI 728
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BLAST of mRNA_H-elongata_contig4982.12202.1 vs. uniprot
Match: A0A3B8Y9X0_9CYAN (Lipoxygenase n=1 Tax=Cyanothece sp. UBA12306 TaxID=2055757 RepID=A0A3B8Y9X0_9CYAN)

HSP 1 Score: 108 bits (270), Expect = 9.200e-21
Identity = 67/155 (43.23%), Postives = 87/155 (56.13%), Query Frame = 2 
Query:   53 KAFLAKVLASWIYTASTLHAAVNFPQQSLMSFAPNTPGAMYAPPPLDKNERTFEDYLACLPGMKIATTQAVLGNTLGSVFHTRLGDYEMNHFGDKRVQGPLTTFRRHLEDIEDDIINESFQVVDAWRERGKDEKNAQNFAYYTLIPDCVPQSINI 517
            KA+L   L   I+TAS  HAAVNFPQ+ +MS+AP  P A Y P  + K E T +DYL  LP ++ A TQ  L   LGS+++ +LG YE  +F D RV+  L  F+  LE+IED II                E+N     Y  L+P  +PQSINI
Sbjct:  492 KAYLIDALTLIIFTASAQHAAVNFPQKGIMSYAPAVPLAGYLPNSILKQEITAQDYLNLLPPLEQAQTQLNLLTLLGSIYYNKLGQYEQGYFSDPRVKPLLEKFQAKLEEIED-IIK---------------ERNFNRPEYNYLLPSKIPQSINI 630
[Close]
BLAST of mRNA_H-elongata_contig4982.12202.1 vs. uniprot
Match: A0A6P0Y0M1_9CYAN (Lipoxygenase (Fragment) n=1 Tax=Okeania sp. SIO2D1 TaxID=2607792 RepID=A0A6P0Y0M1_9CYAN)

HSP 1 Score: 100 bits (250), Expect = 7.420e-20
Identity = 63/172 (36.63%), Postives = 90/172 (52.33%), Query Frame = 2 
Query:    2 DIGQVGWLKDFHTSRDKKAFLAKVLASWIYTASTLHAAVNFPQQSLMSFAPNTPGAMYAPPPLDKNERTFEDYLACLPGMKIATTQAVLGNTLGSVFHTRLGDYEMNHFGDKRVQGPLTTFRRHLEDIEDDIINESFQVVDAWRERGKDEKNAQNFAYYTLIPDCVPQSINI 517
            D G+ G +K          +L       I+TAS  HAAVNFPQ+ +MS+AP  P A Y P  + K E + +DYL  LP ++ A  Q  L   LGSV++T+LG+Y  NHF D +V+  L  F+++L  +E  I                +++N     Y  L+P  +PQSINI
Sbjct:  127 DFGEDGGIKTLK-------YLINAATLIIFTASAQHAAVNFPQKDIMSYAPAVPLAGYLPSSILKGEVSEQDYLNLLPPLEQAQGQLNLTYLLGSVYYTKLGEYPKNHFTDSKVKPLLEKFQKNLNQVEATI----------------EQRNLNRPQYRYLLPSQIPQSINI 275
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BLAST of mRNA_H-elongata_contig4982.12202.1 vs. uniprot
Match: A0A6P0MCQ4_9CYAN (Lipoxygenase n=1 Tax=Symploca sp. SIO2C1 TaxID=2607783 RepID=A0A6P0MCQ4_9CYAN)

HSP 1 Score: 104 bits (260), Expect = 1.590e-19
Identity = 65/153 (42.48%), Postives = 81/153 (52.94%), Query Frame = 2 
Query:   59 FLAKVLASWIYTASTLHAAVNFPQQSLMSFAPNTPGAMYAPPPLDKNERTFEDYLACLPGMKIATTQAVLGNTLGSVFHTRLGDYEMNHFGDKRVQGPLTTFRRHLEDIEDDIINESFQVVDAWRERGKDEKNAQNFAYYTLIPDCVPQSINI 517
            +L +     I+TAS  HAAVNFPQ  LMS+AP+ P A Y P     +  T +DYL  LP    A  Q  L   LGS + T LG YE  HF D RVQ PL TF++ LE+IE  I                +++N    AY  L+P  +PQSINI
Sbjct:  505 YLTEAATLIIFTASAQHAAVNFPQLGLMSYAPSMPTAGYLPVESLGSHTTEQDYLNLLPPRNQAQDQLNLLYLLGSTYFTELGQYENGHFNDPRVQTPLQTFKQKLEEIEATI----------------EQRNLARPAYQYLLPSKIPQSINI 641
[Close]
BLAST of mRNA_H-elongata_contig4982.12202.1 vs. uniprot
Match: A0A4P2QUL1_SORCE (Lipoxygenase domain-containing protein n=5 Tax=Sorangium cellulosum TaxID=56 RepID=A0A4P2QUL1_SORCE)

HSP 1 Score: 104 bits (259), Expect = 2.310e-19
Identity = 71/176 (40.34%), Postives = 92/176 (52.27%), Query Frame = 2 
Query:    2 DIGQVGWLKDFHTSRDKKAFLAKVLASWIYTASTLHAAVNFPQQSLMSFAPNTPGAMYAPPPLDKNERTFEDYLACLPGMKIATTQAVLGNTLGSVFHTRLGDYEMN----HFGDKRVQGPLTTFRRHLEDIEDDIINESFQVVDAWRERGKDEKNAQNFAYYTLIPDCVPQSINI 517
            DIG+ G ++         A+LA +L   I+TAS  HAAVNFPQ SLMSF P  P A YAP P         +    LP ++ A  Q  +   LG V+++RLGDY+ N    +F D R++ PL  F+R L DIE  I              GK  +N Q F Y  L+P  +PQSINI
Sbjct:  521 DIGEDGAIRTV-------AYLANLLTHVIFTASAQHAAVNFPQSSLMSFTPALPLAAYAPAPSITAGLPSSEIFQHLPPLQQALLQLNVMMLLGGVYYSRLGDYDRNIPGAYFTDARIREPLEAFQRELMDIEATI--------------GK--RNLQRFPYVVLLPSQIPQSINI 673
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4982.12202.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD72_9PHAE1.300e-5861.40Lipoxygenase domain-containing protein n=2 Tax=Ect... [more]
D8LBX4_ECTSI1.930e-5656.98Lipoxygenase n=2 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JW78_9PHAE6.220e-5462.67Lipoxygenase domain-containing protein n=1 Tax=Ect... [more]
A0A6H5K920_9PHAE1.110e-5359.06Lipoxygenase domain-containing protein n=2 Tax=Ect... [more]
A0A6H5JK40_9PHAE1.690e-2270.77Lipoxygenase domain-containing protein n=1 Tax=Ect... [more]
A0A835YNA1_9STRA4.310e-2238.86Lipoxygenase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A3B8Y9X0_9CYAN9.200e-2143.23Lipoxygenase n=1 Tax=Cyanothece sp. UBA12306 TaxID... [more]
A0A6P0Y0M1_9CYAN7.420e-2036.63Lipoxygenase (Fragment) n=1 Tax=Okeania sp. SIO2D1... [more]
A0A6P0MCQ4_9CYAN1.590e-1942.48Lipoxygenase n=1 Tax=Symploca sp. SIO2C1 TaxID=260... [more]
A0A4P2QUL1_SORCE2.310e-1940.34Lipoxygenase domain-containing protein n=5 Tax=Sor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4982contigH-elongata_contig4982:5915..9566 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score158.3
Seed ortholog evalue2.4e-36
Seed eggNOG ortholog2880.D7G113
KEGG rclassRC00561,RC00839,RC02139
KEGG koko:K00461
KEGG ReactionR01595,R03058,R08527
KEGG Pathwayko00590,ko01100,ko04664,ko04726,ko04913,ko05145,map00590,map01100,map04664,map04726,map04913,map05145
EggNOG free text desc.oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
EggNOG OGs28IFU@1,2QQSP@2759
EC1.13.11.34
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons6
Model size2400
Cds size381
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4982.12202.1prot_H-elongata_contig4982.12202.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig4982 6268..7601 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930820.8964677-UTR-H-elongata_contig4982:5914..59841622930820.8964677-UTR-H-elongata_contig4982:5914..5984Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4982 5915..5984 +
1691679584.5867965-UTR-H-elongata_contig4982:5914..59841691679584.5867965-UTR-H-elongata_contig4982:5914..5984Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4982 5915..5984 +
1622930820.9157393-UTR-H-elongata_contig4982:6198..62671622930820.9157393-UTR-H-elongata_contig4982:6198..6267Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4982 6199..6267 +
1691679584.605161-UTR-H-elongata_contig4982:6198..62671691679584.605161-UTR-H-elongata_contig4982:6198..6267Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4982 6199..6267 +
1622930821.016767-UTR-H-elongata_contig4982:7601..79571622930821.016767-UTR-H-elongata_contig4982:7601..7957Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4982 7602..7957 +
1691679584.65558-UTR-H-elongata_contig4982:7601..79571691679584.65558-UTR-H-elongata_contig4982:7601..7957Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4982 7602..7957 +
1622930821.0365248-UTR-H-elongata_contig4982:8042..95661622930821.0365248-UTR-H-elongata_contig4982:8042..9566Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4982 8043..9566 +
1691679584.6650712-UTR-H-elongata_contig4982:8042..95661691679584.6650712-UTR-H-elongata_contig4982:8042..9566Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4982 8043..9566 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930820.9357839-CDS-H-elongata_contig4982:6267..63241622930820.9357839-CDS-H-elongata_contig4982:6267..6324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4982 6268..6324 +
1691679584.6150587-CDS-H-elongata_contig4982:6267..63241691679584.6150587-CDS-H-elongata_contig4982:6267..6324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4982 6268..6324 +
1622930820.961632-CDS-H-elongata_contig4982:6532..66361622930820.961632-CDS-H-elongata_contig4982:6532..6636Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4982 6533..6636 +
1691679584.626243-CDS-H-elongata_contig4982:6532..66361691679584.626243-CDS-H-elongata_contig4982:6532..6636Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4982 6533..6636 +
1622930820.98238-CDS-H-elongata_contig4982:6947..70521622930820.98238-CDS-H-elongata_contig4982:6947..7052Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4982 6948..7052 +
1691679584.637428-CDS-H-elongata_contig4982:6947..70521691679584.637428-CDS-H-elongata_contig4982:6947..7052Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4982 6948..7052 +
1622930821.0025902-CDS-H-elongata_contig4982:7486..76011622930821.0025902-CDS-H-elongata_contig4982:7486..7601Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4982 7487..7601 +
1691679584.6463299-CDS-H-elongata_contig4982:7486..76011691679584.6463299-CDS-H-elongata_contig4982:7486..7601Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4982 7487..7601 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig4982.12202.1

>prot_H-elongata_contig4982.12202.1 ID=prot_H-elongata_contig4982.12202.1|Name=mRNA_H-elongata_contig4982.12202.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp
MSFAPNTPGAMYAPPPLDKNERTFEDYLACLPGMKIATTQAVLGNTLGSV
FHTRLGDYEMNHFGDKRVQGPLTTFRRHLEDIEDDIINESFQVVDAWRER
GKDEKNAQNFAYYTLIPDCVPQSINI*
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mRNA from alignment at H-elongata_contig4982:5915..9566+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig4982.12202.1 ID=mRNA_H-elongata_contig4982.12202.1|Name=mRNA_H-elongata_contig4982.12202.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3652bp|location=Sequence derived from alignment at H-elongata_contig4982:5915..9566+ (Himanthalia elongata Himel1 dioecious)
GGACATCGGTCAAGTGGGATGGCTGAAGGACTTCCACACGTCCAGGGACA
AGAAAGCGTTTCTCGCTAAAGTAGGTTACTTACTGTTGTTGTTGACTACT
ACCACAAATTAATCGCTGTAGGAAGATGCTCTGGACATATCGCCATTCAC
TCGTAAATAATTTGCCGTGGGTGCGCACATTGCATGCCATCAGTGAGTGC
TACAGCAAAGCCCTCGACTCACTCGTGTTCACACATAGCACGGCCAACCT
CCGCCGATTTGATTCGATTTGCTACGTTTCATAGGTGCTCGCAAGCTGGA
TCTACACGGCAAGCACCCTCCATGCCGCCGTCAACTTCCCGCAACAATCC
CTAATGTCCTTCGCACCGAACACGCCCGGGGCTATGTACGCCCCTCCTCC
CCTCGACAAGGTACAAATACATACGGGGATGGCATTTCAAGGCATTGTAT
GACTCGTACGGTTCACGATATACTACGAATATGTTTCTTTCATTCAAATC
ATAACTCTGATAGCTTCACAATTCAGCGTATAGCTTTGATAGTTTGAGTT
ACATACAGCTATATGAGGTCGAATATTGATTTAAATCACTGCCGCATCGT
ATTGTGGTCTTCATGCAGAACGAAAGGACGTTCGAAGACTATCTGGCTTG
CCTGCCGGGCATGAAAATAGCCACGACACAGGCTGTCCTCGGGAATACCC
TCGGCTCTGTATTCCATACAAGGTACGTGTACTACCAAAGTTGTCCTAAT
GCGCATTCTATATTCTACGTGGTACGTACGTGGATCACTTAAAAACCAAT
AACTTATTAAAGTATCATCCTAAAATCAACAGGTGGTGCTGGAGACGACG
TCGTTGCTGGTCTTAGATCCGTATTCTATGGCACTAATATGGGTACATAA
CCGCGACGTTTCGACGCATTTTTGGATCTTTTAGGTGAATCATATTGTAT
CCATATGCGAATTATTTCTAATGGCAACCGGATTCTCTCCTTTTTATCGC
TTGTTGGGGGCGTCACGCACGCGCACACGCAAGGCTCGGAGACTACGAAA
TGAATCATTTCGGCGACAAGCGCGTACAGGGGCCTCTTACCACCTTCCGA
CGCCATTTGGAAGATATCGAGGACGACATCATCAACGAGTGAGTATCTTC
GGTCGTGTCATACATTATGAAATTCTTGCCCTTATATATATATATATATA
TTTGTGGAATAATGGGTGCAAAACCCTTGGGGAACGCATATATCACTGTG
TCGCGGTGGTTTAATTGGAAACCTGCGCGATCAGTTGTACTGTACATCAG
TCTTAAGTTAGACACTCGCGGGAAAAAAACGCTGCAGAAGGCGTCTGCGA
AAAAGGAAGATTATATATATAAGTGTATATATATATATATATATACCCCC
CTTCCATAAAAACCTTATCAATTTTCTGGTTTCTTGAATGTAGCGCAGTA
TCATGTTTGAGCTAGATGTGCTCTATATTAGAACGCCGTTTCCTGCTTTG
ATTTTTTCACCATAGATGTCGCGCTTTCTGATCGGCACGCGTCCTCGCTA
ATGCTTTAAACGTGATTGACAGGAGCTTCCAAGTTGTCGATGCATGGCGC
GAGAGGGGCAAGGACGAGAAGAATGCCCAAAATTTTGCCTACTACACCCT
GATTCCCGACTGTGTTCCCCAGTCCATCAATATCTAGATTGCCAAGAGCG
ATATGTATTTTCCTTCATGGCCTGAAACAAATGTCAAACGAATGCCCGGA
AGGCACAAGAAGGGAGGATGTGTACCAATACCTGTCACGGTGAAGTGTCA
AACAGCATGTGGAGTGTTACGAAGCTTAATGTGTCGTGTGTGTGAGAGAA
TACAGTTAGTAGTGGTCTATCTACTACTAGCCCTCAAAAGTAATAGATTG
TAAATACTTGTGGAAGAAACATGTAATGCGATATGTAATTTAGCGATCGA
CTTAGCGATCCTTGACGCGGAACCGACATAATCAATTCCGACATGATAGT
GTAAGTGTTAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTTCTACGGTGTGTGTATGAGTGTGTCACCGTGTCAGAGTTATAGTGTG
TCAGTTTTTCAGTGTGGTAGTGTGGCAGTGTTTCAGCGTGTCAATGTTTC
AGTGGGTCAAGTGGTTAAGTGTTCCATTTGACTGTTTATCTGTGTTTCTG
TGTGTCAGAGTTTCCATGTGACTGAGGTTCCGTGTGGCAGTATTTCGGTG
TGTCAAGGGTTTCAGTGTTTCAGTGGGTGAGTGTGTCATTATCTTTGTGT
GCGTCTGCTGGCTTTAAAACTAACTTATTGTTGCTGGCGTGATCTATAAT
GCGAGCCTGTGGCAGTGTTATGTACTTTCATTACTTAGGGTAAGGGGCGT
TGTAGATATTTCTAATTTGCTGCCAAGCGAAGGCCACCAGCCTCCGTTGT
AAAGCAACGGATCTGAAATTATTGCTTCATGCGGTGGAAAAAGTGTCTGA
AGTCGTACTAGACGTTGTACCCCACTAAGTCTCTCGGCATCATTCCCGAT
AGCAGTCGAGTGGAGCATAATGTAAGTATACATGACGAAGCCAAGGGCAT
GAATGGCGCAGTAATAGTACCATAAACGCTCCAGGCGTTCTTGCCGAGCT
GTCGCTTAGGGGATTCGTGTTTGAGACTGCTTGGAAAAAAGTAAAGCTTA
GACATCAATGCCTAAGACTATCGTAGGAAATATTAATTATATATTTCCAC
TTTGGAGGTTAATGCAGAAAGTTTGGTGCCTGCGTCGAAATCCACCGCCA
TGGTCGATTATGATTCGAGGTTAATGCAGAACGTTTGGTGCCTGTAAAGA
AATCCACCGCCATGGTCGGTTATGGTTCAAAATGGCAGTGGTTTATAGTG
TTGCCAGGGGTATTCGGTAGTGCCCCACGATGGCATATGTAGTGGTAGTT
GTCTTAGATGTCTTGCGTGCTGTTTTGGCAAGGCTGCTTTATGGCCTATG
TGCTGTGGGGAAGGGAGCATTTGTCTTTCCTAGTCTTGGGTTTATTCATA
TATATATATATATATATTTATGGACTCGTTACAAGCGTTACAAGTTGCCA
GAGAGGGGGATACTTAGCCCTAAGACAACGTGCTGAAAATATTGTGCTTG
AAATGAGGTAGAAGTGTTGGGGGTACATGTAGAAACGAGATAAATAGTTG
AAGATTATACAGAGACCTAGCCCGTAGATATGTGCTTCGGTTTTTAATTT
CTACGCAGTCGATTTAAGTAAAGTAACGCTCGCTATGTCGTCGTACAGGC
ACCCCCGCACGTTATCTGATACTAGTAGCGAGAAAAAAGTAGCCAAAGTA
ACAGTACGCTATCTGCTAATAATGGGGCATATGTTTTGCACTTACTGTAG
AGGACGGAATAAAAACCAAGACCGCGAACGACCTTGCGAGGTCAAGGGCG
GTACCCCAGAACCCCTCCGAGTAGAGGACTAGTATCGATAGCAAGGCAGC
CAATTCACGAGGAGGGGTAGCAGCACACGAGTCGATGGCCGTCTCGCAAG
CAGGAAACATCTCGCTCTGCTGACACCCCAGGAGGGGTATAACGAGGCCT
AAATCACCTAGACCTCGCTCTACTCAATGCCGTATTGCACGGGACGTCGT
AG
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Coding sequence (CDS) from alignment at H-elongata_contig4982:5915..9566+

>mRNA_H-elongata_contig4982.12202.1 ID=mRNA_H-elongata_contig4982.12202.1|Name=mRNA_H-elongata_contig4982.12202.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=762bp|location=Sequence derived from alignment at H-elongata_contig4982:5915..9566+ (Himanthalia elongata Himel1 dioecious)
ATGTCCTTCGCACCGAACACGCCCGGGGCTATGTACGCCCCTCCTCCCCT
CGACAAGATGTCCTTCGCACCGAACACGCCCGGGGCTATGTACGCCCCTC
CTCCCCTCGACAAGAACGAAAGGACGTTCGAAGACTATCTGGCTTGCCTG
CCGGGCATGAAAATAGCCACGACACAGGCTGTCCTCGGGAATACCCTCGG
CTCTGTATTCCATACAAGAACGAAAGGACGTTCGAAGACTATCTGGCTTG
CCTGCCGGGCATGAAAATAGCCACGACACAGGCTGTCCTCGGGAATACCC
TCGGCTCTGTATTCCATACAAGGCTCGGAGACTACGAAATGAATCATTTC
GGCGACAAGCGCGTACAGGGGCCTCTTACCACCTTCCGACGCCATTTGGA
AGATATCGAGGACGACATCATCAACGAGCTCGGAGACTACGAAATGAATC
ATTTCGGCGACAAGCGCGTACAGGGGCCTCTTACCACCTTCCGACGCCAT
TTGGAAGATATCGAGGACGACATCATCAACGAGAGCTTCCAAGTTGTCGA
TGCATGGCGCGAGAGGGGCAAGGACGAGAAGAATGCCCAAAATTTTGCCT
ACTACACCCTGATTCCCGACTGTGTTCCCCAGTCCATCAATATCTAGGAG
CTTCCAAGTTGTCGATGCATGGCGCGAGAGGGGCAAGGACGAGAAGAATG
CCCAAAATTTTGCCTACTACACCCTGATTCCCGACTGTGTTCCCCAGTCC
ATCAATATCTAG
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