mRNA_H-elongata_contig49663.12170.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig49663.12170.1
Unique NamemRNA_H-elongata_contig49663.12170.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig49663.12170.1 vs. uniprot
Match: D8LFX4_ECTSI (Probable high CO2 inducible periplasmic protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX4_ECTSI)

HSP 1 Score: 396 bits (1018), Expect = 4.220e-134
Identity = 181/299 (60.54%), Postives = 225/299 (75.25%), Query Frame = 1
Query:    1 IRTIRGFSTSAKEKRLGEKWFKIYEDYWGEPDYADLFTSAACKGTGQFKSLSMEIRAESCTKGAQFQNVWMYVIHKLEHAISDCYAGDLTNNDGGPHAWDEAWAFWSGSLEGEEGTGEGLMGYALAEKECEQFGTCTGDDDGDKTTGTSAVNYKLLKLFNKGLARLQAGDCGDVEAIKENIVKLMTVPLLQGLIRYIYLADPDGGNGGDKEAAKLWTFAVAVLPQIHKCDSEVADVILANTEINGSNAPIGDGYALVKDSLESVYSCMGIRCSQIGGFLV-DSEEYFDGFEPCGGGSGG 894
            IRTI+GFST A+EK  GEKWF +YE YWG  DYAD FTS AC GT QF   S+E RAE C KGAQ+QNVWMYVIH+LE AI DC  G+L  NDGGPHAWDE W F++GSLEG EGTG+G+M YALAEK CE F TCT DDDG   TGT+ VN  +L+L+ +G   L  GDCG    +K+ I+ LM VPL+QG++RY Y ADP+ G+GGDK AA+LW F+ A+LP+I++CD EVA ++ ANT+I  ++AP+ +GY  +K+ LESVYSCMGI CSQ+GG ++ +S  Y+DGFEPCG    G
Sbjct:   82 IRTIQGFSTGAQEKLSGEKWFDVYEAYWGSTDYADQFTSGACNGTEQFDDASVETRAEGCVKGAQYQNVWMYVIHELEDAIEDCDIGNLNANDGGPHAWDEGWGFYAGSLEGTEGTGDGVMLYALAEKRCENFATCTADDDGSDITGTAQVNSDMLELYKEGQVYLLDGDCGAAGDVKDKIIDLMGVPLVQGMLRYFYNADPEAGDGGDKAAAELWAFSAAMLPRINECDEEVATLVRANTDIASADAPMSEGYVFLKEQLESVYSCMGISCSQVGGLVIGESTTYYDGFEPCGDSDSG 380          
BLAST of mRNA_H-elongata_contig49663.12170.1 vs. uniprot
Match: A0A6H5KYS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS6_9PHAE)

HSP 1 Score: 370 bits (950), Expect = 1.840e-121
Identity = 180/318 (56.60%), Postives = 217/318 (68.24%), Query Frame = 1
Query:    1 IRTIRGFSTSAKEKRLGEKWFKIYEDYWGEPDYADLFTSAACKGTGQFKSLSMEIRAESCTKGAQFQNVWMYVIHKLEHAISDCYAG---------DLTNNDGGPHAWDEAWAFWSGSLEGEE--GTGEGLMGYALAEKECEQFGTCTGDDDGDKTTGTSAVNYKLLKLFNKGLARLQAGDCGDVEAIKENIVKLMTVPLLQGLIRYIYLADPDGGNGGDKEAAKLWTFAVAVLPQIHKCDSEVADVILANTEINGSNAPIGDGYALVKDSLESVYSCMGIRCSQIGGFLVDSEEYFDGFEPCGGGSGGRWADDDSST 921
            IRT++GFST A EK  GE  F ++E YWG PDYAD FTSAAC+GTG F+   M  R+E C KGAQ+QNVWMYV H+L  A+ DC  G         DL+ NDGGPHAWDE WAF++GSLEG    G+G+G M YALAEK CE FGTCTGD DG   TG SA+N +LL L+  G A L AG C    A+ + I+ LM VPL+QGL+RY YLADP  G GGDKEAA+LW F+ A+LP I  CD  V   +  NTE+ G++AP+ DGYA +K  LESVYSCMGI C+Q+GG L D+  Y+  FEPC   S G  A  D S+
Sbjct:  246 IRTVQGFSTGADEKLTGEATFDVWEAYWGSPDYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVEDCEIGGGCVKVAEGDLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLDLWEDGKANLLAGQCTQASAVIDEILPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSAAILPWISACDPAVGTAVRDNTELGGASAPMADGYAAIKGQLESVYSCMGITCAQVGGLLDDTGAYYTNFEPCTDSSDGTLASTDRSS 563          
BLAST of mRNA_H-elongata_contig49663.12170.1 vs. uniprot
Match: D8LQ42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ42_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 1.440e-112
Identity = 171/293 (58.36%), Postives = 210/293 (71.67%), Query Frame = 1
Query:    4 RTIRGFSTSAKEKRLGEKWFKIYEDYWGEPDYADLFTSAACKGTGQFKSLSMEIRAESCTKGAQFQNVWMYVIHKLEHAISDCYAGDLTNNDGGPHAWDEAWAFWSGSLEGEE--GTGEGLMGYALAEKECEQFGTCTGDDDGDKTTGTSAVNYKLLKLFNKGLARLQAGDCGDVEAIKENIVKLMTVPLLQGLIRYIYLADPDGGNGGDKEAAKLWTFAVAVLPQIHKCDSEVADVILANTEINGSNAPIGDGYALVKDSLESVYSCMGIRCSQIGGFLVDSEEYFDGFEPC 876
            RT++G ST A+EK  GE  F ++E YWG PDYAD +TSAAC+GTG F+   M  R+E C KGAQ+QNVWMYV H+L  A+ DC  GDL+ NDGGPHAWDE WAF++GSLEG    GTG+G M YALAEK CE FGTCTGD DG  TTG SA+N +LL L+  G A L A  C    A+ + IV LM VPL+QGL+RY YLADP  G GGDKEAA+LW F+ ++LP I  CD+ V   +  NTE+  ++AP+ DGYA +K  LE+VYSCMGI C+Q+GG L D+  Y+  FEPC
Sbjct:  458 RTLQGLSTDAQEKLTGEATFDVWEAYWGSPDYADQYTSAACQGTGTFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCENGDLSANDGGPHAWDEGWAFYTGSLEGTAVGGTGDGQMLYALAEKRCENFGTCTGDSDGSDTTGVSAINSELLGLWEDGKANLLAEQCTQASAVIDQIVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSASILPWISACDAAVGTTVRDNTELGSASAPMADGYAAIKTQLETVYSCMGITCAQVGGLLDDTGAYYTDFEPC 750          
BLAST of mRNA_H-elongata_contig49663.12170.1 vs. uniprot
Match: D8LDE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE3_ECTSI)

HSP 1 Score: 335 bits (858), Expect = 2.190e-104
Identity = 159/299 (53.18%), Postives = 209/299 (69.90%), Query Frame = 1
Query:    1 IRTIRGFSTSAKEKRLGEKWFKIYEDYWGEPDYADLFTSAACKGTGQFKSLSMEIRAESCTKGAQFQNVWMYVIHKLEHAISDCYAGDLTNNDGGPHAWDEAWAFWSGSLEGEEGT--GEGLMGYALAEKECEQFGTCTGDDDGDKTTGTSAVNYKLLKLFNKGLARLQAGDCGDVEAIKENIVKLMTVPLLQGLIRYIYLADPDGGNGGD-KEAAKLWTFAVAVLPQIHKCDSEVADVILANTEINGSNAPIGDGYALVKDSLESVYSCMGIRCSQIGGFLV--DSEEYFDGFEPCGG 882
             RTI+ FST A+EK  GEKWF++Y+ YWG PDYAD FTSAAC GTG ++++   +RAE+CTKGAQ+QNVWMYVIH++E+A+  C  GD    DGGPH WDEAWAF++GSLEGE G   G+G M YALA+K C  FGTC G D     TGT+A+N  +L+L   G   L  G C + E  KE+IV+LMTVPL+Q  +RY+Y ADP     GD K  A+LW FA A+LP I +C ++VA  + +N++I+  +AP+  G+  VK+ LES+YSC+G+ C Q+GG L    + +Y  G EPCGG
Sbjct:  444 FRTIQAFSTDAEEKLGGEKWFEVYQAYWGAPDYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACNRGDNGAADGGPHHWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTCGGADG---ITGTAAINDDILELIGAGSGYLLEGKCAEAEEAKESIVQLMTVPLVQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLIDECSADVAHTVRSNSDIDSEHAPVSAGFVAVKEELESIYSCLGMTCDQVGGLLAGDSTTDYVPGLEPCGG 739          
BLAST of mRNA_H-elongata_contig49663.12170.1 vs. uniprot
Match: A0A7S2V1S6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S6_9STRA)

HSP 1 Score: 319 bits (817), Expect = 7.610e-101
Identity = 152/294 (51.70%), Postives = 202/294 (68.71%), Query Frame = 1
Query:    1 IRTIRGFSTSAKEKRLGEKWFKIYEDYWGEPDYADLFTSAACKGTGQFKSLSMEIRAESCTKGAQFQNVWMYVIHKLEHAISDCYAGDLTNNDGGPHAWDEAWAFWSGSLEGEEGTGEGLMGYALAEKECEQFGTCTGD-DDGDKTTGTSAVNYKLLKLFNKGLARLQAGDCGDVEAIKENIVKLMTVPLLQGLIRYIYLADPDGGNGGDKEAAKLWTFAVAVLPQIHKCDSEVADVILANTEINGSNAPIGDGYALVKDSLESVYSCMGIRCSQIGGFLVDSE-EYFDGFEPC 876
            +RTI+GFSTSA  K  GE ++ IY  YWG+  YAD FTSAAC+GTG + ++   +R E C KGA +QNVWMYVIH++E AI DC + DLT+ND G  AWDEA AF++GSLEG +G G+G + Y+LA+K C  FGTCTGD    +  +G +AVN +++ LF  G  +L  GDCG+VE +K  IV  MT+PL+QG +RY+Y ADP G N G+K  A+LW F+ AVLP+I +CDS VA ++  N+ I     P+ DGY  VK++LE+ YSC+G  CS +GG +      Y  G EPC
Sbjct:  311 VRTIKGFSTSAATKMAGEPFYGIYRTYWGDAAYADSFTSAACQGTGDYANVPDIVRVECCQKGAPYQNVWMYVIHEMEDAIGDCKSSDLTDNDSGVVAWDEAVAFYTGSLEGVDGKGDGNLLYSLADKRCANFGTCTGDVGSSNSQSGRAAVNERIIDLFRDGSVKLHNGDCGEVEKVKNAIVDQMTIPLVQGTLRYLYKADPKGANEGNKARAELWAFSAAVLPRIAECDSGVASMLRENSYIGKD--PMKDGYVAVKEALETTYSCLGFMCSDVGGIIDGGAGNYISGMEPC 602          
BLAST of mRNA_H-elongata_contig49663.12170.1 vs. uniprot
Match: A0A7S2XA87_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XA87_9EUKA)

HSP 1 Score: 290 bits (742), Expect = 2.550e-92
Identity = 145/297 (48.82%), Postives = 188/297 (63.30%), Query Frame = 1
Query:    4 RTIRGFSTSAKEKRLGEKWFKIYEDYWGEP-----DYADLFTSAACKGTGQFKSLSMEIRAESCTKGAQFQNVWMYVIHKLEHAISDCYAGDLTNNDGGPHAWDEAWAFWSGSLEGEEGTGEGLMGYALAEKECEQFGTCTGDDDGDKTTGTSAVNYKLLKLFNKGLARLQAGDCGDVEAIKENIVKLMTVPLLQGLIRYIYLADPDGG-NGGDKEAAKLWTFAVAVLPQIHKCDSEVADVILANTEINGSNAPIGDGYALVKDSLESVYSCMGIRCSQIGGFLVDSEEYFDGFEPC 876
            RTI+GFST A  K +G KW ++Y  Y G       +YAD+FTS AC G GQF  +    + E C KG+ +QNVWMYV+ +++ AI DC  GDL+NN    HAWDEA AF+ GSLEG +G+G G++GYALAEK   QFGT   D       G++ VN +++ LF  G ++L AG C +VE +++ IV  +TVPL+QG +RY  L DP G    G K  A+ W FA+AVLPQI++C+  VA  I  N +      P+ DGY  VK   ESVYSCMGI C  +GG L  +E YFDG EPC
Sbjct:   72 RTIQGFSTGAVPKMVGSKWMEVYARYHGTQGAPMYNYADVFTSDACLGQGQFAGVDQVAKKELCKKGSAYQNVWMYVVWEMQDAIDDCLGGDLSNNGAAVHAWDEAVAFYVGSLEGTDGSGAGVLGYALAEKRAPQFGTANSD-------GSAIVNAEVMDLFKDGQSKLLAGKCAEVETVRDKIVAQITVPLVQGALRYALLTDPAGPIRQGAKGQAEGWAFAIAVLPQINRCNPTVAAEIRENLQYPNPQGPMVDGYRYVKQQFESVYSCMGITCDSVGGLLNGNEGYFDGMEPC 361          
BLAST of mRNA_H-elongata_contig49663.12170.1 vs. uniprot
Match: A0A7S1TU13_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU13_9STRA)

HSP 1 Score: 281 bits (720), Expect = 2.080e-89
Identity = 141/290 (48.62%), Postives = 181/290 (62.41%), Query Frame = 1
Query:   31 AKEKRLGEKWFKIYEDYWGEPDYADLFTSAACKGTGQFKSLSMEIRAESCTKGAQFQNVWMYVIHKLEHAISDCYAGDLTNNDGGPHAWDEAWAFWSGSLEG--EEGTGEGLMGYALAEKECEQFGTCTGDDDGDKTTGTSAVNYKLLKLFNKGLARLQAGDCGDVEAIKENIVKLMTVPLLQGLIRYIYLADPDGG--NGGDKEAAKLWTFAVAVLPQIHKCDSEVADVILANTEINGSNAPIGDGYALVKDSLESVYSCMGIRCSQIGGFLVDSEE----YFDGFEPC 876
            A  K  GE+ +++Y  YWG   YAD    AA  GTG +      +R E  +K A +   WMYVIH++E AI+DC  GD+T+ND   HAWDEAW F+SG+LEG  EEG  +G++ Y LAEK C  FGTC GDDDGD TTG S VN +LL L+ +G+  L+ G C   E I   IVK MTVPL+QG +RY Y ADP+GG      K+ A+ W F  AVLPQI  CD+ VA +I AN E  G  +P+ DGYA V   ++ VYSC+GI C+ +GG++    +    Y  G EPC
Sbjct:    1 AGTKLAGEELYELYRAYWGSDSYADDMVVAALDGTGIYAGADDVVREEIASKTAAYSVTWMYVIHEMEDAINDCNEGDITSNDDAVHAWDEAWVFYSGTLEGSSEEGNRDGVLAYRLAEKRCANFGTCNGDDDGDATTGKSLVNDQLLSLYKQGMHALEDGKCNSAEVILRAIVKQMTVPLIQGTLRYAYKADPNGGADTPASKQQAEGWAFTSAVLPQIDACDAGVASMIRANMEY-GVASPVADGYAAVYAEMQKVYSCLGITCADVGGYVASVTDGTITYVSGTEPC 289          
BLAST of mRNA_H-elongata_contig49663.12170.1 vs. uniprot
Match: A0A7R9Y8Q2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q2_9STRA)

HSP 1 Score: 284 bits (726), Expect = 1.210e-86
Identity = 145/304 (47.70%), Postives = 190/304 (62.50%), Query Frame = 1
Query:    1 IRTIRGFSTSAKEKRLGEKWFKIYEDYWGEPDYADLFTSAACKGTGQFKSLSMEIRAESCTKGAQFQNVWMYVIHKLEHAISDCYAGDLTNN-DGGPHAWDEAWAFWSGSLEGEEGTGEGLMGYALAEKECEQFGTCTGDDDGDKTTGTSAVNYKLLKLFNKGLARLQAGDCGDVEAIKENIVKLMTVPLLQGLIRYIYLADPDGGN------GGDKEAAKLWTFAVAVLPQIHKCDSEVADVILANTE-INGSNAPIGDGYALVKDSLESVYSCMGIRCSQIGGFLVDSEE----YFDGFEPC 876
            +RT++GFST A  K  GE  +++Y  YWG  DYAD F +AA  GTG +   S  +R E  +KGA +QN WMYVIH+LE A+ DC AG   NN D   HAWDE WAF++GSLE  +GTG G+  YALAEK C  F TCTGDDDGD +TG SAVN +LL L+ +G   L AG+C     +   IVK MTVPL+QG++RY YLAD   G         + + A+ W F  AV+PQ+  CD+ +A  I AN E + G+ +P+ DGY +V   ++  YSC+GI C+ +GG+L    +    Y  G  PC
Sbjct:   30 LRTLQGFSTEAGTKLSGEDLYELYRAYWGADDYADQFVTAALDGTGPYVDSSDLVRDEIASKGAAYQNTWMYVIHELEDAVLDCQAGTPMNNEDPAVHAWDEGWAFYAGSLE--DGTGSGVQVYALAEKRCANFFTCTGDDDGDASTGRSAVNAELLSLYQEGQLALNAGNCNGAALVVREIVKQMTVPLIQGVLRYAYLADQSIGGVQATPEEWEDDQAEGWAFTAAVMPQLDACDAALAAEIRANMEFVQGNTSPVQDGYEVVYAKMQRFYSCLGITCADVGGYLSSVTDGVPTYVSGAGPC 331          
BLAST of mRNA_H-elongata_contig49663.12170.1 vs. uniprot
Match: A0A7S1IQR3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IQR3_9EUGL)

HSP 1 Score: 263 bits (672), Expect = 8.600e-79
Identity = 130/292 (44.52%), Postives = 180/292 (61.64%), Query Frame = 1
Query:    1 IRTIRGFSTSAKEKRLGEKWFKIYEDYWGEPDYADLFTSAACKGTGQFKSLSMEIRAESCTKGAQFQNVWMYVIHKLEHAISDCYAGDLTNNDGGPHAWDEAWAFWSGSLEGEEGTGEGLMGYALAEKECEQFGTCTGDDDGDKTTGTSAVNYKLLKLFNKGLARLQAGDCGDVEAIKENIVKLMTVPLLQGLIRYIYLADPDGGNGGDKEAAKLWTFAVAVLPQIHKCDSEVADVILANTEINGSNAPIGDGYALVKDSLESVYSCMGIRCSQIGGFLVDSEEYFDGFEPC 876
            +RT++GFST     +   + +++++ Y+G   YA+ F  AA +GTG F   +   R ES  KG  + N WMYV+ ++E AI DC AG L +ND G HAWDEAWAF++GSLEG +G+G G+  YALA+K C  FGTCT        +G SA+N  +L LF  GLA L+AG C D  ++   I + M VPL+QG++RY + ADP  G  G KE A+ W F   +LPQ+ +C    A  +  N +I  S +P+  G+A VK +LESVY C+GI C  +GG L +   Y+ G EPC
Sbjct:  406 LRTLQGFSTQMSAGKQQAELYQLFKAYYGSATYANDFVMAALEGTGVFAGKATVARQESVKKGISYGNTWMYVVVEMEDAIQDCTAGLLADNDKGVHAWDEAWAFYAGSLEGADGSGSGVQPYALADKRCVDFGTCTA-------SGGSAINRDILALFQDGLALLRAGKCTDARSVMTAITRKMAVPLVQGVLRYAWKADPVNGVSGPKEIAEGWAFTRGILPQVQQCSVAAATTVRNNMDI-ASASPVSGGFAAVKQALESVYPCLGITCGDVGGVL-NGASYYAGMEPC 688          
BLAST of mRNA_H-elongata_contig49663.12170.1 vs. uniprot
Match: F0Y9I4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9I4_AURAN)

HSP 1 Score: 259 bits (662), Expect = 1.310e-74
Identity = 137/309 (44.34%), Postives = 188/309 (60.84%), Query Frame = 1
Query:    1 IRTIRGFSTSAKEKRLGEKWFKIYEDYWGEPDYADLFTSAACKGTGQFKSLSMEIRAESCTKGAQFQNVWMYVIHKLEHAISDCYAGDLTNN----DGG--PHAWDEAWAFWSGSLEGEEGTGEGLMGYALAEKECEQFGTCTGDDDGDKTTGTSAVNYKLLKLFNKGLARLQAGDCGDVEAIKENIVKLMTVPLLQGLIRYIYLADPDGGNGG------DKEAAKLWTFAVAVLPQIHKCDSEVADVILANTEINGSNAPIGDGYALVKDSLESVYSCMGIRCSQIGGFLVDSEEYFDGFEPCGGGSG 891
            IRT+RGF+TS   K   E W+ +Y++YWG+ DYAD F   A   +G + SL   +R +   KG  +Q VWMYV+H+ E AISDC AGD+ +N    D G  PHAWDE WAF +GS+EG +G+G G M Y LAEK C  FGTC        T+G +  N K L    +G  ++  GDC  V+   + IVK +TVPL+QG+++Y + +DP    G        KE A+ W FA AVLPQ+H+CD  VA +I+AN ++  S+    +G+   K+S+ESVYSCMGI C+ +G F  +S   + G + C  GSG
Sbjct: 3456 IRTLRGFATSGASKMAEETWWPVYKNYWGDDDYADTFVMNAI--SGDYASLPDNMRDQLIKKGVAYQAVWMYVMHEFEDAISDCLAGDIWDNEETSDAGDSPHAWDEGWAFLAGSIEGTDGSGSGQMLYQLAEKRCADFGTCVSG-----TSGEAKANLKALAYAEQGRDKILDGDCVTVQFEFDEIVKQLTVPLVQGMLKYAFKSDPANSQGSCTSGSCPKEWAEGWAFAAAVLPQVHECDHTVASMIVANLDVMNSDPMSENGFEEFKESVESVYSCMGITCADMGEFQ-NSAGVYAGMDACVDGSG 3756          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49663.12170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFX4_ECTSI4.220e-13460.54Probable high CO2 inducible periplasmic protein n=... [more]
A0A6H5KYS6_9PHAE1.840e-12156.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ42_ECTSI1.440e-11258.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDE3_ECTSI2.190e-10453.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V1S6_9STRA7.610e-10151.70Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2XA87_9EUKA2.550e-9248.82Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S1TU13_9STRA2.080e-8948.62Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9Y8Q2_9STRA1.210e-8647.70Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1IQR3_9EUGL8.600e-7944.52Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
F0Y9I4_AURAN1.310e-7444.34Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49663contigH-elongata_contig49663:1423..3849 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score402.1
Seed ortholog evalue2.3e-109
Seed eggNOG ortholog2880.D8LFX4
EggNOG OGs2CH80@1,2S3NP@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size939
Cds size939
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49663.12170.1prot_H-elongata_contig49663.12170.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig49663 1423..3849 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930817.567843-CDS-H-elongata_contig49663:1422..16161622930817.567843-CDS-H-elongata_contig49663:1422..1616Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49663 1423..1616 +
1691679583.0105438-CDS-H-elongata_contig49663:1422..16161691679583.0105438-CDS-H-elongata_contig49663:1422..1616Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49663 1423..1616 +
1622930817.585866-CDS-H-elongata_contig49663:2208..22761622930817.585866-CDS-H-elongata_contig49663:2208..2276Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49663 2209..2276 +
1691679583.0223346-CDS-H-elongata_contig49663:2208..22761691679583.0223346-CDS-H-elongata_contig49663:2208..2276Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49663 2209..2276 +
1622930817.6068034-CDS-H-elongata_contig49663:2815..31371622930817.6068034-CDS-H-elongata_contig49663:2815..3137Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49663 2816..3137 +
1691679583.0320835-CDS-H-elongata_contig49663:2815..31371691679583.0320835-CDS-H-elongata_contig49663:2815..3137Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49663 2816..3137 +
1622930817.6227293-CDS-H-elongata_contig49663:3494..38491622930817.6227293-CDS-H-elongata_contig49663:3494..3849Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49663 3495..3849 +
1691679583.0405424-CDS-H-elongata_contig49663:3494..38491691679583.0405424-CDS-H-elongata_contig49663:3494..3849Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49663 3495..3849 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig49663.12170.1

>prot_H-elongata_contig49663.12170.1 ID=prot_H-elongata_contig49663.12170.1|Name=mRNA_H-elongata_contig49663.12170.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=313bp
IRTIRGFSTSAKEKRLGEKWFKIYEDYWGEPDYADLFTSAACKGTGQFKS
LSMEIRAESCTKGAQFQNVWMYVIHKLEHAISDCYAGDLTNNDGGPHAWD
EAWAFWSGSLEGEEGTGEGLMGYALAEKECEQFGTCTGDDDGDKTTGTSA
VNYKLLKLFNKGLARLQAGDCGDVEAIKENIVKLMTVPLLQGLIRYIYLA
DPDGGNGGDKEAAKLWTFAVAVLPQIHKCDSEVADVILANTEINGSNAPI
GDGYALVKDSLESVYSCMGIRCSQIGGFLVDSEEYFDGFEPCGGGSGGRW
ADDDSSTFGAAQV
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mRNA from alignment at H-elongata_contig49663:1423..3849+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig49663.12170.1 ID=mRNA_H-elongata_contig49663.12170.1|Name=mRNA_H-elongata_contig49663.12170.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2427bp|location=Sequence derived from alignment at H-elongata_contig49663:1423..3849+ (Himanthalia elongata Himel1 dioecious)
ATCAGGACTATTCGGGGGTTTTCCACCTCCGCCAAAGAGAAAAGGTTGGG AGAGAAATGGTTCAAGATCTACGAAGATTACTGGGGCGAGCCCGACTACG CCGACCTTTTCACGTCGGCGGCCTGCAAGGGTACTGGGCAGTTCAAAAGC CTCAGCATGGAGATCAGGGCGGAGAGCTGCACAAAGGGGGCCCAGTAAGT TACATATAGAAGCTATATAAATATATAGAACAAGTATAATAGCTTTGTTA TCAGTCAAGGAACAGACAGAGAGAAGACGAGAAGGGGGTATAACTAGGAG TAGAAAGGTTAGGTAAAACATGCTGCTAGAACACCAAGGAGGGCTCATAA AATGGAAATATCAAGCACGATAATGTTTTTCGTGATCTGTATGTCTTTTA TATATCCTTCAAGTGCTATAGTCTATGATGACAAGTGATATCTGAGCGCA AACAACGCGACATCGCCCGTAATCTTCCGGTCACCAACTGCGTCTCCTTG AGAGGCATTATTCAATCAATGGCGATATCCCGCGATATCCAACATAAGAC ACACATGAACATGCGCCCGTCTCTATATACGGTTCTAACCACTCAACTGC ACGAATATCATAGGCGCGAACAGTGAATTCTCTATTAGTGTTGTAAATAG ATCCTACCGTACGTTTTAGTCGTGATTTTGGCACAGCTGCGTAATTAAGA ATATCCCAATATTTGAGTCGAGCGGCGTTGAGCGAGTTTCAAACCCGCCT CTGCGCCCCTCTTTCATGTGGTCAATATTTACACAGGTTCCAAAACGTCT GGATGTACGTGATTCATAAGCTCGAGCACGCCATAAGTGATTGCTATGCC GGAGGTACGTGGCTTTGCGTGGAAGCATACGCCATGCAGGAGTAAAAATA TATGTACATTGCAGTGCGCAACGATGTTAGTTTTACTCTGCCTACTTGAG CTGGTATTTTGACGGTGGGTCCTGTCTATACCGCCCATGAAGAGTAATGT ATCATTCGATTTGCTTGACATGATGTCCTCTGGATCAGCACTCTCGCCGT GGCATAATTCGTTGAACGAGGAAACCTAACTATGTTCGAGAGTGCGCGTG TTATTTTTTCCATCAGACAATACACACACGAGAAGATGAGTAGGGGATAG CAACAAGTAATACATGTAGGGCATGATAGAGGCATGCACATACGCCCACA AGAAGGGCTCCTCTTGTGTGTGTAGTCCCATGGATGGTCAATATATATTC GATGGTAATACTACAGTGGTACAAGGAGCACACCCCGCTCCCCTCCGCGG CTCATTTTGTTTTCTAAAGGCAGCCTGTGAACGTATACAGACCGTTCACC GATGTCAAGCTCGCGAGTCTCCTCCATATTCCTCGGCGTGCAGATCTCAC CAATAACGACGGAGGTCCGCATGCGTGGGACGAAGCTTGGGCCTTTTGGA GTGGTTCACTCGAGGGAGAAGAAGGAACGGGCGAGGGACTCATGGGATAC GCGCTCGCCGAAAAGGAATGCGAGCAGTTTGGGACGTGCACGGGCGACGA CGACGGTGACAAAACGACGGGGACTTCAGCCGTCAACTACAAGCTCCTGA AGCTGTTCAACAAAGGACTGGCCAGGCTCCAGGCGGGGGACTGCGGTGAC GTGGAAGCTATCAAGGAAAATATCGTCAAGCTCATGACCGTTCCCCTGTT GCAGGGCCTGATCAGGTGTGCGTTCCCTGACCCAGTATAGCTCTATCTCG CCCCGAAGGTACTATTTGACTCAGGTGTCTTAGCTCGTCTCAAGCTTGGG AGTTGGCCATATTTGGCGTGACGTATCCTGCTATCCGTCAAACAAGCGCA TGGCCACATCTACCCCCTCGTTGCTAACCGAATTTTATCGTATAAATCCA TCGCGATTTGAATCGATCAATTCTTGAGGGCGTCGAGAGCAATCTTTGTC AAAGTCTACGGATTCTCCAAATCGAAAATGGGAATATGAAAGTATTTGAA TGTACCCTTAGTTCTTAGTCGTATCATTTCCAGCCCCTCATGAAACATAT GCCCTCCAACGCTCGTATGAAGGTACATCTACTTGGCCGACCCTGACGGA GGAAACGGGGGTGACAAGGAGGCCGCCAAGCTGTGGACGTTCGCGGTCGC GGTCTTGCCCCAGATCCACAAGTGTGACTCGGAAGTAGCCGACGTCATAC TGGCTAATACGGAGATCAATGGCAGCAATGCGCCAATCGGGGATGGCTAC GCCTTGGTGAAAGACTCGCTCGAGAGCGTCTACTCCTGCATGGGCATCAG GTGCTCCCAGATCGGCGGCTTCTTGGTCGACTCGGAAGAGTATTTTGACG GGTTTGAACCCTGCGGTGGTGGTAGTGGTGGTCGTTGGGCTGACGATGAT TCTTCTACGTTCGGTGCAGCACAAGTG
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Coding sequence (CDS) from alignment at H-elongata_contig49663:1423..3849+

>mRNA_H-elongata_contig49663.12170.1 ID=mRNA_H-elongata_contig49663.12170.1|Name=mRNA_H-elongata_contig49663.12170.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1878bp|location=Sequence derived from alignment at H-elongata_contig49663:1423..3849+ (Himanthalia elongata Himel1 dioecious)
ATCAGGACTATTCGGGGGTTTTCCACCTCCGCCAAAGAGAAAAGGTTGGG
AGAGAAATGGTTCAAGATCTACGAAGATTACTGGGGCGAGCCCGACTACG
CCGACCTTTTCACGTCGGCGGCCTGCAAGGGTACTGGGCAGTTCAAAAGC
CTCAGCATGGAGATCAGGGCGGAGAGCTGCACAAAGGGGGCCCAATCAGG
ACTATTCGGGGGTTTTCCACCTCCGCCAAAGAGAAAAGGTTGGGAGAGAA
ATGGTTCAAGATCTACGAAGATTACTGGGGCGAGCCCGACTACGCCGACC
TTTTCACGTCGGCGGCCTGCAAGGGTACTGGGCAGTTCAAAAGCCTCAGC
ATGGAGATCAGGGCGGAGAGCTGCACAAAGGGGGCCCAGTTCCAAAACGT
CTGGATGTACGTGATTCATAAGCTCGAGCACGCCATAAGTGATTGCTATG
CCGGAGGTTCCAAAACGTCTGGATGTACGTGATTCATAAGCTCGAGCACG
CCATAAGTGATTGCTATGCCGGAGATCTCACCAATAACGACGGAGGTCCG
CATGCGTGGGACGAAGCTTGGGCCTTTTGGAGTGGTTCACTCGAGGGAGA
AGAAGGAACGGGCGAGGGACTCATGGGATACGCGCTCGCCGAAAAGGAAT
GCGAGCAGTTTGGGACGTGCACGGGCGACGACGACGGTGACAAAACGACG
GGGACTTCAGCCGTCAACTACAAGCTCCTGAAGCTGTTCAACAAAGGACT
GGCCAGGCTCCAGGCGGGGGACTGCGGTGACGTGGAAGCTATCAAGGAAA
ATATCGTCAAGCTCATGACCGTTCCCCTGTTGCAGGGCCTGATCAGATCT
CACCAATAACGACGGAGGTCCGCATGCGTGGGACGAAGCTTGGGCCTTTT
GGAGTGGTTCACTCGAGGGAGAAGAAGGAACGGGCGAGGGACTCATGGGA
TACGCGCTCGCCGAAAAGGAATGCGAGCAGTTTGGGACGTGCACGGGCGA
CGACGACGGTGACAAAACGACGGGGACTTCAGCCGTCAACTACAAGCTCC
TGAAGCTGTTCAACAAAGGACTGGCCAGGCTCCAGGCGGGGGACTGCGGT
GACGTGGAAGCTATCAAGGAAAATATCGTCAAGCTCATGACCGTTCCCCT
GTTGCAGGGCCTGATCAGGTACATCTACTTGGCCGACCCTGACGGAGGAA
ACGGGGGTGACAAGGAGGCCGCCAAGCTGTGGACGTTCGCGGTCGCGGTC
TTGCCCCAGATCCACAAGTGTGACTCGGAAGTAGCCGACGTCATACTGGC
TAATACGGAGATCAATGGCAGCAATGCGCCAATCGGGGATGGCTACGCCT
TGGTGAAAGACTCGCTCGAGAGCGTCTACTCCTGCATGGGCATCAGGTGC
TCCCAGATCGGCGGCTTCTTGGTCGACTCGGAAGAGTATTTTGACGGGTT
TGAACCCTGCGGTGGTGGTAGTGGTGGTCGTTGGGCTGACGATGATTCTT
CTACGTTCGGTGCAGCACAAGTGGTACATCTACTTGGCCGACCCTGACGG
AGGAAACGGGGGTGACAAGGAGGCCGCCAAGCTGTGGACGTTCGCGGTCG
CGGTCTTGCCCCAGATCCACAAGTGTGACTCGGAAGTAGCCGACGTCATA
CTGGCTAATACGGAGATCAATGGCAGCAATGCGCCAATCGGGGATGGCTA
CGCCTTGGTGAAAGACTCGCTCGAGAGCGTCTACTCCTGCATGGGCATCA
GGTGCTCCCAGATCGGCGGCTTCTTGGTCGACTCGGAAGAGTATTTTGAC
GGGTTTGAACCCTGCGGTGGTGGTAGTGGTGGTCGTTGGGCTGACGATGA
TTCTTCTACGTTCGGTGCAGCACAAGTG
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