mRNA_H-elongata_contig49578.12153.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig49578.12153.1
Unique NamemRNA_H-elongata_contig49578.12153.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig49578.12153.1 vs. uniprot
Match: D7G700_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G700_ECTSI)

HSP 1 Score: 519 bits (1337), Expect = 3.120e-166
Identity = 365/831 (43.92%), Postives = 460/831 (55.35%), Query Frame = 1 
Query:    1 QTQALAEMFPGLPEQAALSVLQSCGGDLSVAVDEALTITSLGSLTREGPFLAETPPNAGTPRELWRD--------GSLSYSASTSIG---NDEAVLPAPPPGEGGAEGTRHSGAFSSPLVAGDSDTARET-ENRRRKLPLGSNKGRYVMGSGELGLLAELQIPRRGAVVALPDHFLRVPRAITTAAADVTPAAAVEERGDQDVSGEDIGVAMSPLVNLDFDSSDDGGENHKLARLDPLVM------------------PSTRGAQRRSESFFGRHPLEEVENEDARSSCDA--------EDIFVARGKET-SVNHDHEEK-----LADGKPAS-----TGVRPARLGMGAFWEEPSVPAQSVETATAAKRIAAFLPGTRFRVAVDKGVTGLGITVKEIRGCFYVYRLQTLPDGSPGAAEEAGIKAGDELLGVEELDFERERWSMDQLVSYMSELVGVVILSVMRGQGPLPQSSTSDERSGMSHGVKRNVDGLSADGGAAGSSECGNTDGAEARGVDKQARRLIEVLQEEELSQPGEAEGVSRMFCQITDRARQWDSGELWLPVAAPSRRRSSREAIAALVDRWKPGEPAGWEVSGSSD-------DDGDSSERYRSNGAMSSIRNNRRGVGHDSAGLQNQEEDDPAADLDKIGTALLGRPLFAADPL--SRVDGHGGCSSC----------GGGRYWSPWTKLVALEKQGNDSLQDAVVPTWGLRKALNVRVLGEE-------NFAAKSGLAGAKADPRESQPAAYVIWVMDVESGAEWRVRRCHAEFAELREVCTGLRPSLARLDFPQRLSFNKIKETPGMVAARRPRYQ 2268
            + + L +MFP  P Q   ++ ++CG D S A+DEALT+ SLG+   +  F          P + W D        G   ++  TS G   +  A   AP         TR   A    +   D+ +A    EN   KLP    + RYV+GSGELGLL ELQ+PRRGAVV LP  FLRVP   +  +    PAA      D D    +     SP +     S    GE     R DP                     PS R +     +     P   VE+ DA+             E +  + GKE  ++    + K        G+P       T  RP   G  A+       AQ VETA+AA+RIA F PGTRFRVAVDKGVTGLGITVKEIRG F+VY+LQ L DGS GAAEEAG+KAGD+LLGVEELDFE ERW MDQLVSYM EL+GVVIL VMRG GPLPQ+  SD  +GMS+GV R+ +   A  G+AG+ + GN  GA    V ++ARRL+EVL+EE+LS+P EA  +SR++CQI DRARQWD+GELWL V   +RR  SR+ +A + ++W P  P GW+ S SS+            +ER  S+ +  S+  +      D  G Q  + D+P  DLD IG ALLG+PLF+ DPL   RVD  G  ++           GGG YWSPW +LVALE +   + +  VVPT GLRKALNVR+L +              G  G  + P   Q A+Y++WVMDVESGAEWRVRRCH EF+EL EVCTG+RPSLARLDFP  L    +KET G+V ARRPR +
Sbjct:    4 EAKVLFDMFPDTPHQTLATIWRNCGEDFSTALDEALTVASLGNADEQARFDGGDFAAIEAPVDYWEDAPALLPALGERRFAPETSAGPVSSSRAHDTAPE--------TRRPSANGGGVTYADAASAMSPRENGLPKLPWEGKEKRYVIGSGELGLLNELQMPRRGAVVPLPVDFLRVPVGSSQPSTPPAPAAEPLIVLDPDGRSSEPNQVPSPTLASVRGSVVWDGER---GRGDPASSSPGASFGGRQFGSPAKNTPSVRASPTLLRNVGENQPT--VESTDAKPQMKVVGGDRNGGERVGDSPGKEAWAIGSSGQRKKPVPTALRGEPIPANSRRTDSRPPARGGSAWGAGAGGNAQKVETASAAERIANFRPGTRFRVAVDKGVTGLGITVKEIRGRFFVYKLQHLADGSQGAAEEAGVKAGDQLLGVEELDFETERWDMDQLVSYMGELMGVVILHVMRGFGPLPQAPKSDFENGMSYGVARSNEEDGAADGSAGT-DGGNESGAST--VQRRARRLVEVLEEEDLSKPSEAADISRLYCQINDRARQWDTGELWLSVNDMARR-PSRDTLAVMANQWHPDPPPGWDESDSSEGRSLPNSSGAQRAERSSSDISDDSLVPDPAATKRDGVGAQ--DGDEPGTDLDTIGAALLGQPLFS-DPLMEGRVDEAGAAAAARSSLADGDDEGGGHYWSPWPQLVALESKA--AQRTTVVPTQGLRKALNVRILEQPPXXXXXXXXXXXDGKGGRSSAP---QTASYLVWVMDVESGAEWRVRRCHPEFSELWEVCTGMRPSLARLDFPPWLP--DVKETAGVVDARRPRLE 807
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BLAST of mRNA_H-elongata_contig49578.12153.1 vs. uniprot
Match: A0A6H5KQH5_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH5_9PHAE)

HSP 1 Score: 470 bits (1209), Expect = 1.620e-151
Identity = 343/827 (41.48%), Postives = 434/827 (52.48%), Query Frame = 1 
Query:    1 QTQALAEMFPGLPEQAALSVLQSCGGDLSVAVDEALTITSLGSLTREGPFLAETPPNAGTPRELWRD--------GSLSYSASTSIG---NDEAVLPAPPPGEGGAEGTRHSGAFSSPLVAGDSDTARETENRRRKLPLGSNKGRYVMGSGELGLLAELQIPRRGAVVALPDHFLRVPRAITTAAADVTPAAAVEERGDQDVSGEDIGVAMSPLVNLDFDSSDDGGENHKLARLDPLVMPSTRGA--------------QRRSESFFGRHPLEEVEN---------------------EDARSSCDAEDIFVAR----------GKET-SVNHDHEEKL-------ADGKPAS--TGVRPARLGMGAFWEEPSVPAQSVETATAAKRIAAFLPGTRFRVAVDKGVTGLGITVKEIRGCFYVYRLQTLPDGSPGAAEEAGIKAGDELLGVEELDFERERWSMDQLVSYMSELVGVVILSVMRGQGPLPQSSTSDERSGMSHGVKRNVDGLSADGGAAGSSECGNTDGAEARGVDKQARRLIEVLQEEELSQPGEAEGVSRMFCQITDRARQWDSGELWLPVAAPSRRRSSREAIAALVDRWKPGEPAGWEVSGSSDDDG--DSSERYRSNGAMSSIRNNRRGVGHDSA-----GLQNQEEDDPAADLDKIGTALLGRPLFAADPL--SRVDGHGGCSSC----------GGGRYWSPWTKLVALEKQGNDSLQDAVVPTWGLRKALNVRVLGEENFA-------------AKSGLAGAKADPRESQPAAYVIWVMDVESGAEWRVRRCHAEFAELREVCTGLRPSLAR 2187
            + + L +MFP  P Q   ++ ++CG D S A+DEALT+ SLG+   +  F          P + W D        G   + A TS G   +  A   AP         TR   A      A  +      EN   KLP    + RYV+GSGELGLL ELQ+PRRGA+V LP  FLRVP   +  +   TP A                 A  PL+ LD D     G + +  ++    + S RG+                   SF GR     V+N                     E A +    + +   R          GKE  ++    + K         +  PAS     RP   G  A+        Q VETA+AA+RIA F PGTRFRVAVDKGVTGLGITVKEIRG F+VY+LQ+L DGS GAAEEAG+KAGD+LLGVEELDFE ERW MDQLVSYM EL+GVVIL VMRG GPLPQ+  SD  +GMS+GV R+ +G   DG A G              V ++ARRL+EVL+EE LS+  EA  +SR++CQI DRA+QWD+GELWL V   +RR  SR+ +A + ++W P  P GW+   SS+     +SS   R+  + S I ++   +  D A     G   Q+ D+P  DLD IG ALLG+PLF+ DPL   RVD  G  +            GGG YWSPW +LVALE +   + +  VVPT GLRKALNVR+L +                 AK G + A       Q  +Y++WVMDVESGAEWRVRR H EF+EL EVCTG+RPSLAR
Sbjct:    4 EAKVLFDMFPDTPHQTLATIWRNCGEDFSTALDEALTVASLGNADEQARFDGGDFAAIEAPADYWEDAPALLPALGERRFVAETSTGPVSSSRAHDTAPE--------TRRPSANGGVTYADAASAMSPKENGLPKLPWEGKEERYVIGSGELGLLNELQMPRRGAIVPLPVGFLRVPGGFSQPS---TPPA----------------TAAEPLIVLDPD-----GRSSEPNQVSSPTLASVRGSTVWDSERGRGNPASSSPGASFGGRQFRSPVKNTPPVRASPTLLRNVGEHQPTVESANAKAQMKVVGGDRNGGVRVGDNPGKEAWAIRSSGQRKKPVPTTLRGEPSPASRKADFRPPVRGGSAWGAGAGSNNQKVETASAAERIANFRPGTRFRVAVDKGVTGLGITVKEIRGRFFVYKLQSLADGSQGAAEEAGVKAGDQLLGVEELDFETERWDMDQLVSYMGELMGVVILHVMRGFGPLPQAPKSDLENGMSYGVARSNEG---DGAADGXXXXXXXXXGGVSTVQRRARRLVEVLEEEGLSKTSEAADISRLYCQIDDRAKQWDTGELWLSVNDMARR-PSRDTLAVMANQWHPDPPPGWDELDSSEGRSLPNSSGAQRAERSSSDISDDP--LVPDPAATKRDGFGGQDGDEPGIDLDTIGAALLGQPLFS-DPLMEGRVDEAGAAAGARSSVAGGDDEGGGHYWSPWPQLVALESKA--AQRTTVVPTQGLRKALNVRILEQPXXXXXXXXXXXXXSDDAKGGRSSAP------QTVSYLVWVMDVESGAEWRVRRRHPEFSELWEVCTGMRPSLAR 783
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BLAST of mRNA_H-elongata_contig49578.12153.1 vs. uniprot
Match: A0A7S2CVH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CVH7_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 9.410e-11
Identity = 47/107 (43.93%), Postives = 58/107 (54.21%), Query Frame = 1 
Query: 1948 VVPTWGLRKALNVRVLGEENFAAKSGLAGAKADPRESQPAAYVIWVMDVESGAEWRVRRCHAEFAELREVCTGLRPSLARLDFPQRLSFNKIKETPGMVAARRPRYQ 2268
            VV   GLR AL +RVLG E+            D  E     Y+IWV+DVESGAEWR+ R + EF +L E    LRPSL +LDFP R     + ET   V  R+ R +
Sbjct:   11 VVSMDGLRPALCIRVLGAEHL----------EDHTE-----YLIWVLDVESGAEWRISRRYREFFDLAERLQALRPSLLKLDFPARRPA--LYETVATVNDRKARLE 100
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BLAST of mRNA_H-elongata_contig49578.12153.1 vs. uniprot
Match: F0XY90_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY90_AURAN)

HSP 1 Score: 62.4 bits (150), Expect = 3.820e-6
Identity = 44/106 (41.51%), Postives = 53/106 (50.00%), Query Frame = 1 
Query: 1951 VPTWGLRKALNVRVLGEENFAAKSGLAGAKADPRESQPAAYVIWVMDVESGAEWRVRRCHAEFAELREVCTGLRPSLARLDFPQRLSFNKIKETPGMVAARRPRYQ 2268
            V T  LR AL VR+LG +            AD        Y++WV+DV +GAEWRV R   EF EL E    LRPS  +LDFP R     + ET   V  RR R +
Sbjct:  314 VDTARLRPALCVRILGTDY-----------ADDHT----VYILWVLDVLAGAEWRVPRRFREFFELHEELVALRPSTEKLDFPTRRP--SLYETTHSVNDRRVRLE 402
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BLAST of mRNA_H-elongata_contig49578.12153.1 vs. uniprot
Match: A0A7S3NP42_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NP42_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.840e-6
Identity = 41/101 (40.59%), Postives = 51/101 (50.50%), Query Frame = 1 
Query: 1966 LRKALNVRVLGEENFAAKSGLAGAKADPRESQPAAYVIWVMDVESGAEWRVRRCHAEFAELREVCTGLRPSLARLDFPQRLSFNKIKETPGMVAARRPRYQ 2268
            LR AL VR+LG +                      Y++WV+DV +GAEWRV+R   EF EL E    LRPS+ +LDFP R     I ET   V  RR R +
Sbjct:  407 LRPALCVRILGTDYV---------------EDHTVYILWVLDVLAGAEWRVQRRFREFFELHEELIKLRPSIDKLDFPTRRP--SIYETVHTVNDRRVRLE 490
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BLAST of mRNA_H-elongata_contig49578.12153.1 vs. uniprot
Match: A0A7S2G0S3_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G0S3_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 7.170e-6
Identity = 38/102 (37.25%), Postives = 48/102 (47.06%), Query Frame = 1 
Query: 1951 VPTWGLRKALNVRVLGEENFAAKSGLAGAKADPRESQPAAYVIWVMDVESGAEWRVRRCHAEFAELREVCTGLRPSLARLDFPQRLSFNKIKETPGMVAARR 2256
            VPT GLR AL +RV+               A         YV+W+ DV+SGAEW   R   +F  LR V   LRPSL  L+FP +     + +T   V  RR
Sbjct:    7 VPTSGLRPALCIRVI---------------ACDYNDYHTQYVVWIQDVQSGAEWHCSRRFRDFRHLRAVVNSLRPSLDHLEFPMQ---RPLYDTMATVTTRR 90
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49578.12153.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G700_ECTSI3.120e-16643.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQH5_9PHAE1.620e-15141.48PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2CVH7_9STRA9.410e-1143.93Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
F0XY90_AURAN3.820e-641.51Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3NP42_9STRA3.840e-640.59Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2G0S3_9STRA7.170e-637.25Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49578contigH-elongata_contig49578:928..4057 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score529.3
Seed ortholog evalue3e-147
Seed eggNOG ortholog2880.D7G700
EggNOG free text desc.Vacuolar sorting protein 9 (VPS9) domain
EggNOG OGs28RHE@1,2QY6H@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size2271
Cds size2250
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49578.12153.1prot_H-elongata_contig49578.12153.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig49578 949..4057 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930816.0420604-UTR-H-elongata_contig49578:927..9481622930816.0420604-UTR-H-elongata_contig49578:927..948Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig49578 928..948 +
1691679582.370139-UTR-H-elongata_contig49578:927..9481691679582.370139-UTR-H-elongata_contig49578:927..948Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig49578 928..948 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930816.058795-CDS-H-elongata_contig49578:948..10691622930816.058795-CDS-H-elongata_contig49578:948..1069Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49578 949..1069 +
1691679582.3805914-CDS-H-elongata_contig49578:948..10691691679582.3805914-CDS-H-elongata_contig49578:948..1069Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49578 949..1069 +
1622930816.0968947-CDS-H-elongata_contig49578:1474..24421622930816.0968947-CDS-H-elongata_contig49578:1474..2442Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49578 1475..2442 +
1691679582.388418-CDS-H-elongata_contig49578:1474..24421691679582.388418-CDS-H-elongata_contig49578:1474..2442Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49578 1475..2442 +
1622930816.113287-CDS-H-elongata_contig49578:2788..35141622930816.113287-CDS-H-elongata_contig49578:2788..3514Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49578 2789..3514 +
1691679582.3968883-CDS-H-elongata_contig49578:2788..35141691679582.3968883-CDS-H-elongata_contig49578:2788..3514Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49578 2789..3514 +
1622930816.1257193-CDS-H-elongata_contig49578:3622..40571622930816.1257193-CDS-H-elongata_contig49578:3622..4057Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49578 3623..4057 +
1691679582.4085548-CDS-H-elongata_contig49578:3622..40571691679582.4085548-CDS-H-elongata_contig49578:3622..4057Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49578 3623..4057 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig49578.12153.1

>prot_H-elongata_contig49578.12153.1 ID=prot_H-elongata_contig49578.12153.1|Name=mRNA_H-elongata_contig49578.12153.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=750bp
MFPGLPEQAALSVLQSCGGDLSVAVDEALTITSLGSLTREGPFLAETPPN
AGTPRELWRDGSLSYSASTSIGNDEAVLPAPPPGEGGAEGTRHSGAFSSP
LVAGDSDTARETENRRRKLPLGSNKGRYVMGSGELGLLAELQIPRRGAVV
ALPDHFLRVPRAITTAAADVTPAAAVEERGDQDVSGEDIGVAMSPLVNLD
FDSSDDGGENHKLARLDPLVMPSTRGAQRRSESFFGRHPLEEVENEDARS
SCDAEDIFVARGKETSVNHDHEEKLADGKPASTGVRPARLGMGAFWEEPS
VPAQSVETATAAKRIAAFLPGTRFRVAVDKGVTGLGITVKEIRGCFYVYR
LQTLPDGSPGAAEEAGIKAGDELLGVEELDFERERWSMDQLVSYMSELVG
VVILSVMRGQGPLPQSSTSDERSGMSHGVKRNVDGLSADGGAAGSSECGN
TDGAEARGVDKQARRLIEVLQEEELSQPGEAEGVSRMFCQITDRARQWDS
GELWLPVAAPSRRRSSREAIAALVDRWKPGEPAGWEVSGSSDDDGDSSER
YRSNGAMSSIRNNRRGVGHDSAGLQNQEEDDPAADLDKIGTALLGRPLFA
ADPLSRVDGHGGCSSCGGGRYWSPWTKLVALEKQGNDSLQDAVVPTWGLR
KALNVRVLGEENFAAKSGLAGAKADPRESQPAAYVIWVMDVESGAEWRVR
RCHAEFAELREVCTGLRPSLARLDFPQRLSFNKIKETPGMVAARRPRYQ*
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mRNA from alignment at H-elongata_contig49578:928..4057+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig49578.12153.1 ID=mRNA_H-elongata_contig49578.12153.1|Name=mRNA_H-elongata_contig49578.12153.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3130bp|location=Sequence derived from alignment at H-elongata_contig49578:928..4057+ (Himanthalia elongata Himel1 dioecious)
CAAACGCAGGCGCTGGCGGAGATGTTTCCAGGCCTTCCCGAGCAGGCTGC
TTTGTCCGTGTTGCAGAGCTGCGGGGGAGACTTGTCGGTTGCGGTGGACG
AAGCCCTGACCATCACAAGCCTCGGCAGCCTCACCCGCGAGGGTAAGAGA
ACCCGCCACGAGGCAGCAGGCGGTTTGCAGAGGAATAACGAAGCCTCTAG
GGCGCGCGAAACGTGGAAATTTCCATCGCTTTTAACAAGAGCAGTACGAG
ATACCAATGACGCAGGCAGGGTTGGCACCCGACATTCTCGAGCCGCTTGG
GCAGCTCGCTCTCTTGTTTTCAGCTTATTATCATTCTGTAGATATTACTG
TTGTGGGCGTCGAACCTCCCCAGCCATGAGACCCGAGGTGCATATGTTAT
TGGTTTCTCGGATGCGATTGGTTTATTAACATTCCAGTTACCATGCTTTA
TCCGATGAGAACCCGCGAAGCGCGCCCGCCGAAATCGCAAAACAAACTGC
ATGAATGCACCTCGCGGACTGTGTTCGTCCCGCTCTGCGTCGAGCAGGTC
CATTCCTCGCCGAAACCCCTCCGAACGCCGGAACACCGCGGGAACTATGG
CGCGACGGTTCCTTGTCTTATTCCGCGTCGACGTCTATCGGCAACGATGA
GGCGGTGCTTCCCGCTCCGCCGCCGGGAGAGGGGGGGGCGGAGGGGACGC
GACATTCGGGTGCCTTTTCTTCGCCTCTGGTGGCAGGAGACAGCGACACG
GCACGGGAGACGGAGAACCGGCGACGGAAGCTTCCTCTCGGGAGCAACAA
GGGACGGTATGTTATGGGGTCTGGGGAGCTGGGCCTCTTGGCCGAGCTAC
AGATTCCCAGGAGGGGAGCAGTTGTTGCGCTACCCGATCATTTCCTGAGG
GTGCCGAGAGCGATAACAACCGCCGCTGCCGATGTGACCCCGGCAGCTGC
TGTCGAAGAACGTGGCGACCAGGATGTCTCAGGGGAAGATATCGGGGTAG
CGATGTCGCCGCTCGTCAACCTCGATTTCGACAGCTCTGACGACGGCGGT
GAAAATCATAAGCTGGCTCGGCTTGATCCTTTAGTAATGCCATCCACGCG
CGGCGCTCAAAGAAGAAGTGAAAGCTTTTTCGGTAGGCATCCCCTGGAAG
AGGTGGAAAACGAGGATGCCCGATCCTCTTGTGACGCTGAGGATATTTTT
GTTGCTCGCGGGAAGGAAACAAGCGTAAACCATGACCACGAAGAGAAGCT
CGCCGATGGAAAGCCGGCAAGCACTGGCGTAAGGCCTGCTCGTCTCGGAA
TGGGTGCTTTTTGGGAGGAGCCGAGTGTTCCCGCCCAAAGCGTGGAGACG
GCTACGGCAGCGAAACGAATAGCGGCGTTTCTGCCCGGCACAAGGTTTCG
AGTGGCGGTGGACAAGGGAGTGACGGGACTCGGCATCACCGTGAAGGAAA
TCCGAGGTTGCTTCTATGTCTACAGGCTTCAGACTCTCCCCGACGGATCG
CCGGGTGCAGCTGAGGTGATCGATTTCGACGATGGCGGGTGCGGAAGAGA
GGAAAAGGAACATATATCCTCCTGCCGTTAAATTGATAAAACACCCTTGC
CCCCCCCTCCCCCCCCCTCTGAGTGTAGACTAAACGCTACACGAAGCACA
AAGTAATACTGTAGATTTGCTTGCACGTATGTTTCGTTAGATATCGAGGG
CAGGCCATGATTCCTCCTTCTCGTAGGTACACCACCTCAAAACGCTTGTC
TTGTCTTATCAACAGCATTATTTTCGATGTTCCAACGTGCCTTTACACCA
CCCGCTCCTCGCTGCTTTGACACGATATTCCCTCTCCTAACACACCCAAT
ACACACATCAGGAGGCGGGTATTAAGGCCGGCGATGAGTTGCTGGGGGTC
GAAGAGCTCGACTTCGAGAGAGAGCGATGGAGCATGGACCAACTCGTGTC
GTACATGAGCGAGCTCGTGGGCGTGGTGATCTTGAGCGTGATGCGAGGCC
AAGGGCCTTTGCCACAGTCATCCACGAGCGACGAGCGAAGCGGGATGAGC
CACGGGGTGAAGAGAAACGTCGATGGCCTTAGTGCCGATGGTGGCGCGGC
GGGTTCTTCAGAGTGCGGAAACACAGATGGAGCCGAAGCGCGCGGAGTTG
ACAAGCAAGCACGGAGGCTGATCGAGGTCTTGCAAGAGGAAGAGCTCTCG
CAGCCTGGCGAGGCAGAGGGTGTTTCTCGGATGTTCTGTCAAATCACCGA
CCGAGCGAGGCAGTGGGACTCCGGCGAGCTGTGGCTACCGGTTGCCGCCC
CATCCCGCCGCCGCTCCTCCCGGGAGGCAATCGCCGCGCTGGTGGACCGG
TGGAAACCCGGTGAGCCAGCAGGGTGGGAGGTGTCGGGCAGTAGCGACGA
TGACGGTGATTCCTCGGAGCGTTACCGTTCGAACGGAGCGATGTCGTCTA
TACGAAACAACAGAAGAGGTGTCGGACACGATTCGGCCGGTCTCCAAAAT
CAAGAGGAGGACGACCCGGCAGCAGATCTGGACAAGATCGGTACGGCTCT
CTTAGGGCGACCTCTATTTGCTGCCGACCCCCTTTCCGTGGATTACCTGG
AGTTCGACAACAACGGTGATGGCGATGATAGCAAAGTGGGACCCGAGGTT
ACCGTGGCGGGGGCTGGGCGGAAGCCCGCGCCGTCGTTCAAACAGAGAGT
AGACGGTCACGGTGGCTGCAGTAGCTGCGGTGGCGGGCGCTATTGGTCTC
CGTGGACGAAGCTCGTGGCGCTGGAAAAACAGGGAAATGATTCGCTACAA
GATGCCGTGGTCCCTACGTGGGGCCTGCGGAAGGCACTGAACGTTCGCGT
GCTGGGCGAAGAAAACTTCGCGGCGAAGTCAGGGCTTGCCGGCGCCAAGG
CGGACCCAAGAGAATCACAGCCTGCTGCGTACGTGATTTGGGTGATGGAC
GTGGAGAGCGGTGCAGAGTGGAGGGTGCGGCGGTGCCACGCCGAGTTCGC
CGAGCTCCGGGAGGTGTGCACGGGGCTGAGACCGAGTCTGGCACGGCTGG
ACTTCCCCCAGAGACTGAGCTTCAACAAAATCAAGGAGACCCCGGGCATG
GTTGCGGCCCGACGACCGAGGTACCAATGA
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Coding sequence (CDS) from alignment at H-elongata_contig49578:928..4057+

>mRNA_H-elongata_contig49578.12153.1 ID=mRNA_H-elongata_contig49578.12153.1|Name=mRNA_H-elongata_contig49578.12153.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4500bp|location=Sequence derived from alignment at H-elongata_contig49578:928..4057+ (Himanthalia elongata Himel1 dioecious)
ATGTTTCCAGGCCTTCCCGAGCAGGCTGCTTTGTCCGTGTTGCAGAGCTG
CGGGGGAGACTTGTCGGTTGCGGTGGACGAAGCCCTGACCATCACAAGCC
TCGGCAGCCTCACCCGCGAGGATGTTTCCAGGCCTTCCCGAGCAGGCTGC
TTTGTCCGTGTTGCAGAGCTGCGGGGGAGACTTGTCGGTTGCGGTGGACG
AAGCCCTGACCATCACAAGCCTCGGCAGCCTCACCCGCGAGGGTCCATTC
CTCGCCGAAACCCCTCCGAACGCCGGAACACCGCGGGAACTATGGCGCGA
CGGTTCCTTGTCTTATTCCGCGTCGACGTCTATCGGCAACGATGAGGCGG
TGCTTCCCGCTCCGCCGCCGGGAGAGGGGGGGGCGGAGGGGACGCGACAT
TCGGGTGCCTTTTCTTCGCCTCTGGTGGCAGGAGACAGCGACACGGCACG
GGAGACGGAGAACCGGCGACGGAAGCTTCCTCTCGGGAGCAACAAGGGAC
GGTATGTTATGGGGTCTGGGGAGCTGGGCCTCTTGGCCGAGCTACAGATT
CCCAGGAGGGGAGCAGTTGTTGCGCTACCCGATCATTTCCTGAGGGTGCC
GAGAGCGATAACAACCGCCGCTGCCGATGTGACCCCGGCAGCTGCTGTCG
AAGAACGTGGCGACCAGGATGTCTCAGGGGAAGATATCGGGGTAGCGATG
TCGCCGCTCGTCAACCTCGATTTCGACAGCTCTGACGACGGCGGTGAAAA
TCATAAGCTGGCTCGGCTTGATCCTTTAGTAATGCCATCCACGCGCGGCG
CTCAAAGAAGAAGTGAAAGCTTTTTCGGTAGGCATCCCCTGGAAGAGGTG
GAAAACGAGGATGCCCGATCCTCTTGTGACGCTGAGGATATTTTTGTTGC
TCGCGGGAAGGAAACAAGCGTAAACCATGACCACGAAGAGAAGCTCGCCG
ATGGAAAGCCGGCAAGCACTGGCGTAAGGCCTGCTCGTCTCGGAATGGGT
GCTTTTTGGGAGGAGCCGAGTGTTCCCGCCCAAAGCGTGGAGACGGCTAC
GGCAGCGAAACGAATAGCGGCGTTTCTGCCCGGCACAAGGTTTCGAGTGG
CGGTGGACAAGGGAGTGACGGGACTCGGCATCACCGTGAAGGAAATCCGA
GGTTGCTTCTATGTCTACAGGCTTCAGACTCTCCCCGACGGATCGCCGGG
TGCAGCTGAGGTCCATTCCTCGCCGAAACCCCTCCGAACGCCGGAACACC
GCGGGAACTATGGCGCGACGGTTCCTTGTCTTATTCCGCGTCGACGTCTA
TCGGCAACGATGAGGCGGTGCTTCCCGCTCCGCCGCCGGGAGAGGGGGGG
GCGGAGGGGACGCGACATTCGGGTGCCTTTTCTTCGCCTCTGGTGGCAGG
AGACAGCGACACGGCACGGGAGACGGAGAACCGGCGACGGAAGCTTCCTC
TCGGGAGCAACAAGGGACGGTATGTTATGGGGTCTGGGGAGCTGGGCCTC
TTGGCCGAGCTACAGATTCCCAGGAGGGGAGCAGTTGTTGCGCTACCCGA
TCATTTCCTGAGGGTGCCGAGAGCGATAACAACCGCCGCTGCCGATGTGA
CCCCGGCAGCTGCTGTCGAAGAACGTGGCGACCAGGATGTCTCAGGGGAA
GATATCGGGGTAGCGATGTCGCCGCTCGTCAACCTCGATTTCGACAGCTC
TGACGACGGCGGTGAAAATCATAAGCTGGCTCGGCTTGATCCTTTAGTAA
TGCCATCCACGCGCGGCGCTCAAAGAAGAAGTGAAAGCTTTTTCGGTAGG
CATCCCCTGGAAGAGGTGGAAAACGAGGATGCCCGATCCTCTTGTGACGC
TGAGGATATTTTTGTTGCTCGCGGGAAGGAAACAAGCGTAAACCATGACC
ACGAAGAGAAGCTCGCCGATGGAAAGCCGGCAAGCACTGGCGTAAGGCCT
GCTCGTCTCGGAATGGGTGCTTTTTGGGAGGAGCCGAGTGTTCCCGCCCA
AAGCGTGGAGACGGCTACGGCAGCGAAACGAATAGCGGCGTTTCTGCCCG
GCACAAGGTTTCGAGTGGCGGTGGACAAGGGAGTGACGGGACTCGGCATC
ACCGTGAAGGAAATCCGAGGTTGCTTCTATGTCTACAGGCTTCAGACTCT
CCCCGACGGATCGCCGGGTGCAGCTGAGGAGGCGGGTATTAAGGCCGGCG
ATGAGTTGCTGGGGGTCGAAGAGCTCGACTTCGAGAGAGAGCGATGGAGC
ATGGACCAACTCGTGTCGTACATGAGCGAGCTCGTGGGCGTGGTGATCTT
GAGCGTGATGCGAGGCCAAGGGCCTTTGCCACAGTCATCCACGAGCGACG
AGCGAAGCGGGATGAGCCACGGGGTGAAGAGAAACGTCGATGGCCTTAGT
GCCGATGGTGGCGCGGCGGGTTCTTCAGAGTGCGGAAACACAGATGGAGC
CGAAGCGCGCGGAGTTGACAAGCAAGCACGGAGGCTGATCGAGGTCTTGC
AAGAGGAAGAGCTCTCGCAGCCTGGCGAGGCAGAGGGTGTTTCTCGGATG
TTCTGTCAAATCACCGACCGAGCGAGGCAGTGGGACTCCGGCGAGCTGTG
GCTACCGGTTGCCGCCCCATCCCGCCGCCGCTCCTCCCGGGAGGCAATCG
CCGCGCTGGTGGACCGGTGGAAACCCGGTGAGCCAGCAGGGTGGGAGGTG
TCGGGCAGTAGCGACGATGACGGTGATTCCTCGGAGCGTTACCGTTCGAA
CGGAGCGATGTCGTCTATACGAAACAACAGAAGAGGTGTCGGACACGATT
CGGCCGGTCTCCAAAATCAAGAGGAGGACGACCCGGCAGCAGATCTGGAC
AAGATCGGTACGGCTCTCTTAGGGCGACCTCTATTTGCTGCCGACCCCCT
TTCCGAGGCGGGTATTAAGGCCGGCGATGAGTTGCTGGGGGTCGAAGAGC
TCGACTTCGAGAGAGAGCGATGGAGCATGGACCAACTCGTGTCGTACATG
AGCGAGCTCGTGGGCGTGGTGATCTTGAGCGTGATGCGAGGCCAAGGGCC
TTTGCCACAGTCATCCACGAGCGACGAGCGAAGCGGGATGAGCCACGGGG
TGAAGAGAAACGTCGATGGCCTTAGTGCCGATGGTGGCGCGGCGGGTTCT
TCAGAGTGCGGAAACACAGATGGAGCCGAAGCGCGCGGAGTTGACAAGCA
AGCACGGAGGCTGATCGAGGTCTTGCAAGAGGAAGAGCTCTCGCAGCCTG
GCGAGGCAGAGGGTGTTTCTCGGATGTTCTGTCAAATCACCGACCGAGCG
AGGCAGTGGGACTCCGGCGAGCTGTGGCTACCGGTTGCCGCCCCATCCCG
CCGCCGCTCCTCCCGGGAGGCAATCGCCGCGCTGGTGGACCGGTGGAAAC
CCGGTGAGCCAGCAGGGTGGGAGGTGTCGGGCAGTAGCGACGATGACGGT
GATTCCTCGGAGCGTTACCGTTCGAACGGAGCGATGTCGTCTATACGAAA
CAACAGAAGAGGTGTCGGACACGATTCGGCCGGTCTCCAAAATCAAGAGG
AGGACGACCCGGCAGCAGATCTGGACAAGATCGGTACGGCTCTCTTAGGG
CGACCTCTATTTGCTGCCGACCCCCTTTCCAGAGTAGACGGTCACGGTGG
CTGCAGTAGCTGCGGTGGCGGGCGCTATTGGTCTCCGTGGACGAAGCTCG
TGGCGCTGGAAAAACAGGGAAATGATTCGCTACAAGATGCCGTGGTCCCT
ACGTGGGGCCTGCGGAAGGCACTGAACGTTCGCGTGCTGGGCGAAGAAAA
CTTCGCGGCGAAGTCAGGGCTTGCCGGCGCCAAGGCGGACCCAAGAGAAT
CACAGCCTGCTGCGTACGTGATTTGGGTGATGGACGTGGAGAGCGGTGCA
GAGTGGAGGGTGCGGCGGTGCCACGCCGAGTTCGCCGAGCTCCGGGAGGT
GTGCACGGGGCTGAGACCGAGTCTGGCACGGCTGGACTTCCCCCAGAGAC
TGAGCTTCAACAAAATCAAGGAGACCCCGGGCATGGTTGCGGCCCGACGA
CCGAGGTACCAATGAAGAGTAGACGGTCACGGTGGCTGCAGTAGCTGCGG
TGGCGGGCGCTATTGGTCTCCGTGGACGAAGCTCGTGGCGCTGGAAAAAC
AGGGAAATGATTCGCTACAAGATGCCGTGGTCCCTACGTGGGGCCTGCGG
AAGGCACTGAACGTTCGCGTGCTGGGCGAAGAAAACTTCGCGGCGAAGTC
AGGGCTTGCCGGCGCCAAGGCGGACCCAAGAGAATCACAGCCTGCTGCGT
ACGTGATTTGGGTGATGGACGTGGAGAGCGGTGCAGAGTGGAGGGTGCGG
CGGTGCCACGCCGAGTTCGCCGAGCTCCGGGAGGTGTGCACGGGGCTGAG
ACCGAGTCTGGCACGGCTGGACTTCCCCCAGAGACTGAGCTTCAACAAAA
TCAAGGAGACCCCGGGCATGGTTGCGGCCCGACGACCGAGGTACCAATGA
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