mRNA_H-elongata_contig49526.12143.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig49526.12143.1 vs. uniprot
Match: D8LKY8_ECTSI (Pleckstrin homology (PH) domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKY8_ECTSI) HSP 1 Score: 237 bits (605), Expect = 5.450e-69 Identity = 132/213 (61.97%), Postives = 155/213 (72.77%), Query Frame = 1
Query: 16 DCTKIFANAKQLANFNRQFLLDLRRAYGGP---SQWDLVSPVFRDS--GNWRRTTPERNGHEDPGSVPSTLSTYTSAMDNASKLEGDPFRPSVVAEDVDKGPRQMLEVFLKSAPFLKMYSLYVNNFDSATERLTALERDNASFVAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQHTAIESSMHSKVEESLTTMGGIASKIDAD 639
DC +IFAN +LA+FNRQFLLDLR+A+GGP +VSPV + WR+ T + + GDP RP+ +KGPRQML+VFLKSAPFLKMYS YVNNFD+A ERLTALERDN+SF AFLTACEKQKPCRGL LRDFL+LPVQRIPRYRLLLETILQ+T+I+S+MHS VEESL+TMGGIASKI++D
Sbjct: 76 DCKEIFANTLELAHFNRQFLLDLRKAHGGPFVPGSVGVVSPVSTSTECNEWRKVTSAGRDCLEGEDI------------------GDPLRPTS-PNISEKGPRQMLQVFLKSAPFLKMYSEYVNNFDTARERLTALERDNSSFSAFLTACEKQKPCRGLHLRDFLVLPVQRIPRYRLLLETILQYTSIDSNMHSAVEESLSTMGGIASKINSD 269
BLAST of mRNA_H-elongata_contig49526.12143.1 vs. uniprot
Match: W7TL77_9STRA (Pleckstrin domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL77_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 3.260e-20 Identity = 50/117 (42.74%), Postives = 72/117 (61.54%), Query Frame = 1
Query: 289 DVDKGPRQMLEVFLKSAPFLKMYSLYVNNFDSATERLTALERDNASFVAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQHTAIESSMHSKVEESLTTMGGIASKIDAD 639
++ +G + F K+APF KMYS YV+N+D A E L L F AF+ ACE Q+ C+GL LR +LI+P+QRIPRY+LLL +L+HT E +E ++ + G+ I+ D
Sbjct: 118 ELQRGSQAFGGFFKKAAPFFKMYSSYVSNYDRAMETLLNLIETRLDFAAFVRACELQEGCKGLNLRAYLIMPIQRIPRYKLLLTELLKHTPEEHPDFEDLEAAVKLVSGVVGAINED 234
BLAST of mRNA_H-elongata_contig49526.12143.1 vs. uniprot
Match: L8HC96_ACACA (RhoGEF domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HC96_ACACA) HSP 1 Score: 93.6 bits (231), Expect = 1.420e-18 Identity = 44/105 (41.90%), Postives = 71/105 (67.62%), Query Frame = 1
Query: 319 EVFLKSAPFLKMYSLYVNNFDSATERLTALERDNASFVAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQHTAIESSMHSKVEESLTTMGGIASKID 633
++F + FLK+Y+ Y+NNFD++ L L++ NA+F A+L+ E +K C GL++ FL++PVQRIPRY LLL+ L+HT + H+ V ++L M +A+ I+
Sbjct: 135 DIFKQFTSFLKVYTSYINNFDNSITTLAKLKQSNANFSAYLSYAESRKECNGLQINSFLVMPVQRIPRYVLLLKDFLRHTPEDHDDHANVNKALADMQQVAAYIE 239
BLAST of mRNA_H-elongata_contig49526.12143.1 vs. uniprot
Match: A0A6P8IIR1_ACTTE (FYVE, RhoGEF and PH domain-containing protein 6-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IIR1_ACTTE) HSP 1 Score: 91.3 bits (225), Expect = 9.960e-18 Identity = 46/105 (43.81%), Postives = 67/105 (63.81%), Query Frame = 1
Query: 319 EVFLKSAPFLKMYSLYVNNFDSATERLTALERDNASFVAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQHTAIESSMHSKVEESLTTMGGIASKID 633
+ FL APF+K+YS Y NNF+ A+ L E+ + FV+F+T E + C+GL LR LI PVQR+PRY+LLLE++L T + SK+EE+ + +A I+
Sbjct: 120 DAFLAMAPFIKLYSTYANNFERASNMLQEWEKKSQDFVSFITRQEAMQECKGLNLRALLITPVQRVPRYKLLLESLLNKTPRDYPDFSKLEEATEEIAKVAEHIN 224
BLAST of mRNA_H-elongata_contig49526.12143.1 vs. uniprot
Match: A0A835YJ47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ47_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.140e-17 Identity = 51/123 (41.46%), Postives = 80/123 (65.04%), Query Frame = 1
Query: 265 FRPSVVAEDVDKGPRQMLEVFLKSAPFLKMYSLYVNNFDSATERLTALERDNASFVAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQHTAIESSMHSKVEESLTTMGGIASKID 633
F S+ AE K +++ VF +SA F KMYS+Y+ N+D A +R+ LE + F AF+ ACE Q+ CRGL LR +LI PVQR+PRY+LLL +L+HT ++ + +L+ + +A++++
Sbjct: 102 FLQSLQAEHAQK--KRLGIVFKESASFFKMYSMYIVNYDEAMKRVRLLE-GSGEFRAFVRACELQEACRGLDLRSYLIQPVQRVPRYKLLLAELLKHTKETHPDYANISMALSEITVVATRLN 221
BLAST of mRNA_H-elongata_contig49526.12143.1 vs. uniprot
Match: L8GKC4_ACACA (RhoGEF domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GKC4_ACACA) HSP 1 Score: 90.1 bits (222), Expect = 2.820e-17 Identity = 50/134 (37.31%), Postives = 81/134 (60.45%), Query Frame = 1
Query: 247 KLEGDP-FRPSVVAED--VDKGPRQMLEVFLKSAPFLKMYSLYVNNFDSATERLTALERDNASFVAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQHTAIESSMHSKVEESLTTMGGIASKIDAD 639
KL+ P F S D K +L F+ PF KMY++Y+N+FD+A +R+T L+ + F FL C+ + C+ L L FLI+P+QR+PRY LLL IL++TA ++S H+K+E+ T+ + ++++
Sbjct: 248 KLDKRPSFYDSATKSDSKTQKSLGDLLRAFI---PFFKMYTVYINSFDNANKRITDLQNSSKKFTQFLNDCKARPECKKLDLVSFLIMPIQRLPRYELLLRDILRNTA-DASEHAKIEQVFNTVAEVNKHVNSE 377
BLAST of mRNA_H-elongata_contig49526.12143.1 vs. uniprot
Match: UPI00109BAF0D (rho guanine nucleotide exchange factor 39-like n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BAF0D) HSP 1 Score: 89.0 bits (219), Expect = 6.130e-17 Identity = 45/105 (42.86%), Postives = 66/105 (62.86%), Query Frame = 1
Query: 319 EVFLKSAPFLKMYSLYVNNFDSATERLTALERDNASFVAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQHTAIESSMHSKVEESLTTMGGIASKID 633
+ FL APF+K+YS Y NNF+ A+ L ER + FV F+ E ++ C+GL LR LI PVQR+PRY++LLE++L T + SK+EE+ + +A I+
Sbjct: 122 DAFLAMAPFIKLYSTYANNFEHASRILQEWERKSPEFVQFIXRQEAKEECKGLNLRSLLITPVQRVPRYKMLLESLLNKTPRDYPDFSKLEEATEEIAKVAEHIN 226
BLAST of mRNA_H-elongata_contig49526.12143.1 vs. uniprot
Match: UPI00138FF88E (FYVE, RhoGEF and PH domain-containing protein 2 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FF88E) HSP 1 Score: 88.2 bits (217), Expect = 1.180e-16 Identity = 45/105 (42.86%), Postives = 67/105 (63.81%), Query Frame = 1
Query: 319 EVFLKSAPFLKMYSLYVNNFDSATERLTALERDNASFVAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQHTAIESSMHSKVEESLTTMGGIASKID 633
+ FL APF+K+YS Y NNF++A+ L E+ + F AF+T E + C+GL +R LI PVQR+PRY+LLLE++L T + SK+EE+ + +A I+
Sbjct: 189 DAFLAMAPFIKLYSTYANNFEAASRLLQEWEKKSPEFSAFITRQEALEECQGLNIRALLITPVQRVPRYKLLLESLLNKTPRDYPDFSKLEEATYEIAKVAEHIN 293
BLAST of mRNA_H-elongata_contig49526.12143.1 vs. uniprot
Match: UPI001BB19EF8 (rho guanine nucleotide exchange factor 39-like isoform X1 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB19EF8) HSP 1 Score: 87.8 bits (216), Expect = 1.550e-16 Identity = 43/105 (40.95%), Postives = 65/105 (61.90%), Query Frame = 1
Query: 319 EVFLKSAPFLKMYSLYVNNFDSATERLTALERDNASFVAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQHTAIESSMHSKVEESLTTMGGIASKID 633
E FL+ AP++K+YS Y NNF+ A + L E A+FV FL EK+ CR L L LI P+QR+PRY+LLL+ +L HT ++K++++L + + I+
Sbjct: 132 EAFLQLAPYIKLYSTYANNFEKAIDLLQEWESKAANFVRFLRETEKKDKCRSLSLHALLITPIQRVPRYKLLLKQLLDHTPSSHQDYTKIKDALQNISEVTHGIN 236
BLAST of mRNA_H-elongata_contig49526.12143.1 vs. uniprot
Match: A0A397TNA4_9GLOM (Uncharacterized protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TNA4_9GLOM) HSP 1 Score: 87.4 bits (215), Expect = 2.290e-16 Identity = 44/105 (41.90%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 319 EVFLKSAPFLKMYSLYVNNFDSATERLTALERDNASFVAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQHTAIESSMHSKVEESLTTMGGIASKID 633
++FL APF KMYS+YV NF+SA + RDN +F AFL K C+GL L+ +LI+PVQRIPRY+LLLE +L+ T + + ++++ + +A+ ++
Sbjct: 426 DIFLDMAPFFKMYSIYVKNFNSALSVINVQLRDNPAFSAFLRDIIKTGQCKGLTLQAYLIMPVQRIPRYKLLLEDLLKKTVVTHPDYLNLKKAYQVIENVATFVN 530 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49526.12143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig49526.12143.1 >prot_H-elongata_contig49526.12143.1 ID=prot_H-elongata_contig49526.12143.1|Name=mRNA_H-elongata_contig49526.12143.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=213bp MSPKPDCTKIFANAKQLANFNRQFLLDLRRAYGGPSQWDLVSPVFRDSGNback to top mRNA from alignment at H-elongata_contig49526:2236..4003+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig49526.12143.1 ID=mRNA_H-elongata_contig49526.12143.1|Name=mRNA_H-elongata_contig49526.12143.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1768bp|location=Sequence derived from alignment at H-elongata_contig49526:2236..4003+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig49526:2236..4003+ >mRNA_H-elongata_contig49526.12143.1 ID=mRNA_H-elongata_contig49526.12143.1|Name=mRNA_H-elongata_contig49526.12143.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1278bp|location=Sequence derived from alignment at H-elongata_contig49526:2236..4003+ (Himanthalia elongata Himel1 dioecious)back to top |