mRNA_H-elongata_contig4950.12139.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig4950.12139.1 vs. uniprot
Match: A0A6H5L9W6_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9W6_9PHAE) HSP 1 Score: 104 bits (260), Expect = 7.740e-25 Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 1
Query: 1 TNGHLRSTIHRVVNKLGRERYSIPFFYSPSFDTKVECLPQFCSEDDPAKYPPTTSGKYLMEKLSGLYS*AIRNQK 225
TN LRST+HRVVNKLGRERYSIPFF+ +FDT+V CLPQ CSE++PAKYPP T+G Y++ K S + NQ+
Sbjct: 243 TNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDFDGNQQ 317
BLAST of mRNA_H-elongata_contig4950.12139.1 vs. uniprot
Match: D7FYW9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW9_ECTSI) HSP 1 Score: 104 bits (260), Expect = 7.860e-25 Identity = 49/83 (59.04%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 1 TNGHLRSTIHRVVNKLGRERYSIPFFYSPSFDTKVECLPQFCSEDDPAKYPPTTSGKYLMEKLSGLYS*AIRNQKFSSEGKTS 249
TN LRST+HRVVNKLG ERYSIPFF+ P+FDT+V C PQFCSE++PA+YPP +G YLM K S + Q S+ TS
Sbjct: 242 TNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDFDGYQPDSTASSTS 324
BLAST of mRNA_H-elongata_contig4950.12139.1 vs. uniprot
Match: A0A7S4VMP6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VMP6_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 6.080e-22 Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = 1
Query: 1 TNGHLRSTIHRVVNKLGRERYSIPFFYSPSFDTKVECLPQFCSEDDPAKYPPTTSGKYLMEK 186
TNG RST+HRV+ R+RYS+PFFY P+FDT+VECL CS D+P KYPPTTSG++L++K
Sbjct: 78 TNGLFRSTVHRVLTSGDRDRYSVPFFYEPNFDTRVECLDVCCSPDNPPKYPPTTSGQHLLDK 139
BLAST of mRNA_H-elongata_contig4950.12139.1 vs. uniprot
Match: A0A6A0A6S1_HAELA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A6A0A6S1_HAELA) HSP 1 Score: 90.1 bits (222), Expect = 4.560e-21 Identity = 36/67 (53.73%), Postives = 51/67 (76.12%), Query Frame = 1
Query: 1 TNGHLRSTIHRVVNKLGRERYSIPFFYSPSFDTKVECLPQFCSEDDPAKYPPTTSGKYLMEKLSGLY 201
TNG RST+HRV+N +ERYS+ F P+FD +VECLPQ CS D PA+YPPTT+G+++++K + +
Sbjct: 44 TNGRYRSTLHRVINTTDKERYSLAAFLDPNFDAQVECLPQCCSADRPARYPPTTAGQHILDKYAATH 110
BLAST of mRNA_H-elongata_contig4950.12139.1 vs. uniprot
Match: A0A5J4Y7A5_9CHLO (Hyoscyamine 6-isoform 1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y7A5_9CHLO) HSP 1 Score: 94.0 bits (232), Expect = 1.080e-20 Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 1
Query: 1 TNGHLRSTIHRVVNKLGRERYSIPFFYSPSFDTKVECLPQFCSEDDPAKYPPTTSGKYLMEKLSGLY 201
TNG+ +S++HRVVN LG+ERYS FFY P+F KVECLPQ C +D PAK+PPTT G+YL++K + +
Sbjct: 259 TNGYFKSSLHRVVNHLGKERYSTAFFYEPNFFAKVECLPQ-CCKDKPAKFPPTTCGQYLLDKFAATH 324
BLAST of mRNA_H-elongata_contig4950.12139.1 vs. uniprot
Match: A0A5J4Y974_9CHLO (Gibberellin 2-beta-dioxygenase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y974_9CHLO) HSP 1 Score: 92.8 bits (229), Expect = 1.930e-20 Identity = 38/67 (56.72%), Postives = 54/67 (80.60%), Query Frame = 1
Query: 1 TNGHLRSTIHRVVNKLGRERYSIPFFYSPSFDTKVECLPQFCSEDDPAKYPPTTSGKYLMEKLSGLY 201
TNG+ RST+HRVVN +G+ERYS FFY P+F +V CLPQ C +D+PAK+PPTTSG+++++K + +
Sbjct: 227 TNGYFRSTLHRVVNNVGKERYSTAFFYDPNFTARVACLPQ-CCKDEPAKFPPTTSGQHVLDKYAATH 292
BLAST of mRNA_H-elongata_contig4950.12139.1 vs. uniprot
Match: A0A8J9RD93_9CHLO (2-oxoglutarate-Fe(II) type oxidoreductase hxnY n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RD93_9CHLO) HSP 1 Score: 93.2 bits (230), Expect = 2.050e-20 Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 1
Query: 1 TNGHLRSTIHRVVNKLGRERYSIPFFYSPSFDTKVECLPQFCSEDDPAKYPPTTSGKYLMEKLSGLYS 204
TNG +ST+HRV+ R RYSIPFF+ P FDT+VECLP CS D+P +YPPTTSG++L++K + +S
Sbjct: 240 TNGLFKSTLHRVITDGSRHRYSIPFFFEPDFDTRVECLPCCCSPDNPPRYPPTTSGQHLLDKYAQTHS 307
BLAST of mRNA_H-elongata_contig4950.12139.1 vs. uniprot
Match: I0Z511_COCSC (Oxygenase-like protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z511_COCSC) HSP 1 Score: 92.0 bits (227), Expect = 4.670e-20 Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 1 TNGHLRSTIHRVVNKLGRERYSIPFFYSPSFDTKVECLPQFCSEDDPAKYPPTTSGKYLMEKLSGLYS*AIRNQKFSS 234
TNG +ST+HRVV R RYSIPFF+ P+FDT+VECLP C D+P +YPPTTSG++L++K + ++ K SS
Sbjct: 233 TNGLFKSTLHRVVTDGSRHRYSIPFFFEPNFDTRVECLPCCCGPDNPPRYPPTTSGQHLLDKYAQTHAGFDATSKTSS 310
BLAST of mRNA_H-elongata_contig4950.12139.1 vs. uniprot
Match: A0A225W8H1_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W8H1_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 6.270e-20 Identity = 38/61 (62.30%), Postives = 50/61 (81.97%), Query Frame = 1
Query: 1 TNGHLRSTIHRVVNKLGRERYSIPFFYSPSFDTKVECLPQFCSEDDPAKYPPTTSGKYLME 183
TNG +ST+HRVVN G+ERYS+PFFY P+F +VEC P SE++PAKYPPTTSG++L++
Sbjct: 238 TNGMFKSTLHRVVNVSGKERYSVPFFYEPNFTCQVECFPSCVSEENPAKYPPTTSGQHLVD 298
BLAST of mRNA_H-elongata_contig4950.12139.1 vs. uniprot
Match: A0A7R9YQ36_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YQ36_9CHLO) HSP 1 Score: 91.3 bits (225), Expect = 8.530e-20 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 1 TNGHLRSTIHRVVNKLGRERYSIPFFYSPSFDTKVECLPQFCSEDDPAKYPPTTSGKYLMEKLSGLY 201
TNG ST+HRVVN G+ERYSI FF+ P+F+ VECLPQ C D P KYPPTT+G++L++K + +
Sbjct: 241 TNGMFHSTLHRVVNTTGQERYSIAFFFEPNFEAIVECLPQCCGPDRPPKYPPTTAGQHLLDKYAATH 307 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4950.12139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig4950.12139.1 >prot_H-elongata_contig4950.12139.1 ID=prot_H-elongata_contig4950.12139.1|Name=mRNA_H-elongata_contig4950.12139.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=69bp TNGHLRSTIHRVVNKLGRERYSIPFFYSPSFDTKVECLPQFCSEDDPAKYback to top mRNA from alignment at H-elongata_contig4950:1318..2058+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig4950.12139.1 ID=mRNA_H-elongata_contig4950.12139.1|Name=mRNA_H-elongata_contig4950.12139.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=741bp|location=Sequence derived from alignment at H-elongata_contig4950:1318..2058+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig4950:1318..2058+ >mRNA_H-elongata_contig4950.12139.1 ID=mRNA_H-elongata_contig4950.12139.1|Name=mRNA_H-elongata_contig4950.12139.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=414bp|location=Sequence derived from alignment at H-elongata_contig4950:1318..2058+ (Himanthalia elongata Himel1 dioecious)back to top |