mRNA_H-elongata_contig49173.12098.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig49173.12098.1 vs. uniprot
Match: D7FUN0_ECTSI (Anamorsin homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN0_ECTSI) HSP 1 Score: 224 bits (572), Expect = 1.620e-69 Identity = 137/250 (54.80%), Postives = 158/250 (63.20%), Query Frame = 1
Query: 10 QVLKLLKARGQVNVVFERDVGSTSS---KRALTFAGFVGIASSTEDERVLRGQRATWEPGASAPVRLPIRKPFASSSPVAAVPPPARAEKENG--GSMPPA-------KNTWKLAMDDDNEGGVLGVGAADAEDDLVDEDALLESSAPVKLASQVDADGFATKRRACKDCSCGRAEKEQGD-----EEGMPRP-PLVSVSDVDDALTSACGNCSRGDAFRCGGCPFLGKPAFEKGQERLVMLSDLDTQQD 705
QV+KLLKA G +NV G ++ KRALTFAGF+ +A++ ED RVL G+RA WE GASAPVRL F +S + + NG G+ P A TWKLA+D L+DEDALLESSAPVK AS+ DG ATKRRACKDCSCGRAE E G P P+VSV DVDDALTSACGNCS+GDAFRCGGCPFLGKPAFEKGQE+ +ML DLD+QQD
Sbjct: 82 QVVKLLKAGGNINVAASSQGGEAAAAALKRALTFAGFLNVAANPEDPRVLSGERAAWETGASAPVRLS----FGAS----------KNDSRNGTNGNGPAAXXXXXXXNKTWKLALDXXXXXXXXXXXXX-----LIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMSGGVSNTNGGAAGPLPVVSVGDVDDALTSACGNCSKGDAFRCGGCPFLGKPAFEKGQEKTIMLLDLDSQQD 312
BLAST of mRNA_H-elongata_contig49173.12098.1 vs. uniprot
Match: W7TKP2_9STRA (Anamorsin homolog n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKP2_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.860e-31 Identity = 87/209 (41.63%), Postives = 112/209 (53.59%), Query Frame = 1
Query: 85 KRALTFAGFVGIA---SSTEDERVLRGQRATWEPGASAPVRLPIRKPFASSSPVAAVPPPARAEKENGGSMPPAKNTWKLAMDDDNEGGVLGVGAADAEDDLVDEDALLESSAPV-----KLASQVDADGFATKRRACKDCSCGRAEKEQGDEEGMPRPPLVSVSDVDDALTSACGNCSRGDAFRCGGCPFLGKPAFEKGQERLVMLSD 687
K L AGFV + +S L + WE GA+A V LP+ P G S TW+L D D EGG G AE +L+D D+LLE + + K A + G TK+RACK+CSCGRAE+E+G G P++S +++ A S+CGNC +GDAFRCGGCPFLGKPAFE GQE+LV+ D
Sbjct: 106 KMQLLLAGFVDVEVLPASASSSASLIAHKPQWEVGAAASVSLPVSLPXXXXX---------XXXXXTGQSAA----TWRLT-DVDGEGGEEG----GAEGELIDPDSLLEDAEVMAGLAAKRAEREQGQGCETKKRACKNCSCGRAEQEEG--RGGVALPVMSEEELE-ASVSSCGNCYKGDAFRCGGCPFLGKPAFEPGQEKLVLKLD 293
BLAST of mRNA_H-elongata_contig49173.12098.1 vs. uniprot
Match: A0A836CCA2_9STRA (Anamorsin homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCA2_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.860e-31 Identity = 93/215 (43.26%), Postives = 117/215 (54.42%), Query Frame = 1
Query: 70 GSTSSKRALTFAGFVGIASSTEDERVLRGQRATWEPGASAPVRLPIRKPFASSSPVAAVPPPARAEKENGGSMPPAKNTWKLAMDDDNEGGVLGVGAADAEDDLVDEDALLE--SSAPVKLASQV-DADGFATKRRACKDCSCGRAEKEQGDEEGMPRPPLVSVSDVDDALTSACGNCSRGDAFRCGGCPFLGKPAFEKGQERLVMLSDLDTQQD 705
GS S L +GFV + E + WE GASA ++ KP A + AV P + +K WK+A++D E A+++ LVDEDALLE P+K A+ DA +TK+RACK+CSCGRAE E G P PP D +SACGNC RGDAFRC GCP+LG PAF+KGQE++V LS LDTQ D
Sbjct: 92 GSESVSSKLVLSGFVDARVTPEGVEAFK---PAWEAGASAQLKF---KPKAGNG---AVSKPQQQQKAA------VATAWKVALNDLAEDDF-----AESDGGLVDEDALLEVAGDVPLKRATPAADAGDCSTKKRACKNCSCGRAELEAA---GAPAPPPE-----DGPGSSACGNCYRGDAFRCSGCPYLGLPAFDKGQEKVV-LSSLDTQMD 277
BLAST of mRNA_H-elongata_contig49173.12098.1 vs. uniprot
Match: A0A8K1C8D4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8D4_PYTOL) HSP 1 Score: 104 bits (259), Expect = 2.930e-23 Identity = 75/225 (33.33%), Postives = 112/225 (49.78%), Query Frame = 1
Query: 25 LKARGQVNVVFERDVGSTSSKRALTFAGFVGIASSTEDERVLRGQRATWEPGASAPVRLPIRKPFASSSPVAAVPPPARAEKENGGSMPPAKNTWKLAMDDDNEGGVLGVGAADAEDDLVDEDALLESSAPVKLASQVDAD-GFATKRRACKDCSCGRAEKEQGDEEGMPRPPLVSVSDVDDALTSACGNCSRGDAFRCGGCPFLGKPAFEKGQERLVM-LSDLD 693
+KA G +++ + DV S L G + D + + PG R +KP S AA+P NG WK+ DD + + +DD++DED LL+ + V A++ D + G KRRACK+C+CGR ++E P+VS +++ + S+CGNC +GDAFRCG CPFLGKPAF+ G E++++ L D D
Sbjct: 81 IKAGGTLHL-YVADVDDESKNSVLMGLMIAGFVEAEADAEI------SGYPGLPTARRFTSKKPAFESGSSAAIP-----LNSNGTKTAQPLKKWKVVSDDFD---------GEDDDDVIDEDTLLDDTDEVLQAAKDDCEVGKDGKRRACKNCTCGRKDEED--------KPVVSDAELTQ-MVSSCGNCFKGDAFRCGSCPFLGKPAFKPGMEKVMLNLDDAD 275
BLAST of mRNA_H-elongata_contig49173.12098.1 vs. uniprot
Match: A0A024GTM7_9STRA (Anamorsin homolog n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GTM7_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.620e-22 Identity = 54/112 (48.21%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 373 DDLVDEDALLESSAPVKLASQVDADGFAT-KRRACKDCSCGRAEKEQGDEEGMPRPPLVSVSDVDDALTSACGNCSRGDAFRCGGCPFLGKPAFEKGQERLVMLSDLDTQQD 705
D+ +DED+LL+++ V+ A++ D A KRRACK+C+CGRAE E + P+VS ++ + S+CGNC +GDAFRCGGCPFLGKPAF+ G E++V+ +LD+ D
Sbjct: 176 DEFIDEDSLLDNTEEVRKAAKNDCGVSANGKRRACKNCTCGRAETE------IASGPVVSDQELSQ-MVSSCGNCFKGDAFRCGGCPFLGKPAFKPGMEKVVL--NLDSSDD 278
BLAST of mRNA_H-elongata_contig49173.12098.1 vs. uniprot
Match: F0WJB8_9STRA (Anamorsin homolog n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJB8_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.190e-21 Identity = 57/134 (42.54%), Postives = 80/134 (59.70%), Query Frame = 1
Query: 307 WKLAMDDDNEGGVLGVGAADAEDDLVDEDALLESSAPVKLASQVDADGFAT-KRRACKDCSCGRAEKEQGDEEGMPRPPLVSVSDVDDALTSACGNCSRGDAFRCGGCPFLGKPAFEKGQERLVMLSDLDTQQD 705
WKL +DD + +DED+LL+ + V+ A++ D A KRRACK+C+CGRAE E P+VS ++ + S+CGNC +GDAFRCG CPFLGKPAF+ G E++V+ +LD+ D
Sbjct: 169 WKLTEEDD---------------EFIDEDSLLDDTEEVRKAAKNDCGVSANGKRRACKNCTCGRAETENASN------PVVSDQELSQ-MVSSCGNCFKGDAFRCGACPFLGKPAFKPGMEKVVL--NLDSSDD 278
BLAST of mRNA_H-elongata_contig49173.12098.1 vs. uniprot
Match: DRE2_MONBE (Anamorsin homolog n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=DRE2_MONBE) HSP 1 Score: 100 bits (248), Expect = 1.260e-21 Identity = 75/214 (35.05%), Postives = 110/214 (51.40%), Query Frame = 1
Query: 76 TSSKRALTFAGFVGIASSTEDERV-LRGQRATWEPGASAPVRLPIRKPFASSSPVAAVPPPARAEKENGGSMPPAK--NTWKLAMDDDNEGGVLGVGAADAEDDLVD-EDALLESSAPVKLASQVDADGFATKRRACKDCSCGRAEKEQGDEEGMPRPPLVSVSDVDDALTSACGNCSRGDAFRCGGCPFLGKPAFEKGQERLVMLSDLDTQQD 705
T+ + ALT GFV + ST + + + +E GA+AP++L K +K++G + P A+ W +A DD ++ +L + D+L+D ED L ++AP +V A G KRRACK+C+CGRA+ E E +P L S+CGNC GDAFRC CP+LG PAF+ G++ V LSD + D
Sbjct: 102 TALRSALTMGGFVNVQVSTSEHALEAHADKPVYEVGAAAPLKLSFAK-----------------KKQSGAAAPAAQVAEVWTIATDDFDDDDLL----ENDGDELLDAEDLALATTAPEGDDCEVGAGG---KRRACKNCTCGRADAEA---EQAAKPTLTGPLPA-----SSCGNCYLGDAFRCASCPYLGMPAFKPGEK--VTLSDRQLKAD 281
BLAST of mRNA_H-elongata_contig49173.12098.1 vs. uniprot
Match: DRE2_PHYIT (Anamorsin homolog n=2 Tax=Phytophthora infestans TaxID=4787 RepID=DRE2_PHYIT) HSP 1 Score: 98.6 bits (244), Expect = 4.350e-21 Identity = 52/115 (45.22%), Postives = 78/115 (67.83%), Query Frame = 1
Query: 364 DAEDDLVDEDALLESSAPVKLASQVDA-DGFATKRRACKDCSCGRAEKEQGDEEGMPRPPLVSVSDVDDALTSACGNCSRGDAFRCGGCPFLGKPAFEKGQERLVMLSDLDTQQD 705
D +DD++DED LL+ + V A++ D D K+RACK+C+CG K++ D+ P++S D++ +L S CGNC +GDAFRCG CPFLGKPAF+ G E++++ +LD+ D
Sbjct: 173 DQDDDIIDEDTLLDDTDEVLQAAKADCGDAVGGKKRACKNCTCGL--KDENDK------PVMSEKDLN-SLVSGCGNCFKGDAFRCGSCPFLGKPAFKPGMEKVLL--NLDSSDD 276
BLAST of mRNA_H-elongata_contig49173.12098.1 vs. uniprot
Match: H3GCE9_PHYRM (Anamorsin homolog n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCE9_PHYRM) HSP 1 Score: 97.1 bits (240), Expect = 1.670e-20 Identity = 51/115 (44.35%), Postives = 74/115 (64.35%), Query Frame = 1
Query: 355 GAADAEDDLVDEDALLESSAPVKLASQVDADG-FATKRRACKDCSCGRAEKEQGDEEGMPRPPLVSVSDVDDALTSACGNCSRGDAFRCGGCPFLGKPAFEKGQERLVM-LSDLD 693
G + +DD++DED LL+ + V A++ D D K+RACK+C+CG ++E P++S D++ L S CGNC +GDAFRCG CPFLGKPAF+ G E++++ L D D
Sbjct: 171 GEDEQDDDIIDEDTLLDDTDEVLQAAKADCDEKVGGKKRACKNCTCGLKDEED--------KPVMSEKDLNQ-LVSGCGNCFKGDAFRCGSCPFLGKPAFKPGMEKVLLNLDDAD 276
BLAST of mRNA_H-elongata_contig49173.12098.1 vs. uniprot
Match: A0A0N7L4Q5_PLAHL (Anamorsin homolog n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4Q5_PLAHL) HSP 1 Score: 96.3 bits (238), Expect = 3.190e-20 Identity = 50/113 (44.25%), Postives = 75/113 (66.37%), Query Frame = 1
Query: 370 EDDLVDEDALLESSAPVKLASQVDADGFAT-KRRACKDCSCGRAEKEQGDEEGMPRPPLVSVSDVDDALTSACGNCSRGDAFRCGGCPFLGKPAFEKGQERLVMLSDLDTQQD 705
+DD++DED LL+++ V A++VD + K+RACK+C+CG +KE P++S +++ L S CGNC +GDAFRCG CPFLGKPAF+ G E++++ +LD D
Sbjct: 175 DDDIIDEDTLLDNTDEVLQAAKVDCNEVTGGKKRACKNCTCGLKDKED--------KPVMSEKELN-TLVSGCGNCYKGDAFRCGSCPFLGKPAFKPGMEKVLL--NLDNSDD 276 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49173.12098.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig49173.12098.1 >prot_H-elongata_contig49173.12098.1 ID=prot_H-elongata_contig49173.12098.1|Name=mRNA_H-elongata_contig49173.12098.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp LLVQVLKLLKARGQVNVVFERDVGSTSSKRALTFAGFVGIASSTEDERVLback to top mRNA from alignment at H-elongata_contig49173:33..1605+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig49173.12098.1 ID=mRNA_H-elongata_contig49173.12098.1|Name=mRNA_H-elongata_contig49173.12098.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1573bp|location=Sequence derived from alignment at H-elongata_contig49173:33..1605+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig49173:33..1605+ >mRNA_H-elongata_contig49173.12098.1 ID=mRNA_H-elongata_contig49173.12098.1|Name=mRNA_H-elongata_contig49173.12098.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1422bp|location=Sequence derived from alignment at H-elongata_contig49173:33..1605+ (Himanthalia elongata Himel1 dioecious)back to top |