mRNA_H-elongata_contig49172.12097.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: D8LQF2_ECTSI (GTR1, Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQF2_ECTSI) HSP 1 Score: 183 bits (464), Expect = 4.150e-55 Identity = 94/113 (83.19%), Postives = 101/113 (89.38%), Query Frame = 1
Query: 1 GADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQPGELGHHQ 339
GADEVVLFER TFLVIAH VQH D+HRFEKISNIVKQFKLSVSKTS +F GMMVKNS FT FISDFT NTYIMVVTTSPLVEKATTELNI AA+KHFERLL++P +LGHH+
Sbjct: 195 GADEVVLFERETFLVIAHAKHVQHPDVHRFEKISNIVKQFKLSVSKTSLKFEGMMVKNSNFTVFISDFTENTYIMVVTTSPLVEKATTELNIKAAKKHFERLLVKPEDLGHHE 307
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: A0A835Z771_9STRA (Putative ras-related GTP binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z771_9STRA) HSP 1 Score: 143 bits (361), Expect = 7.970e-40 Identity = 72/104 (69.23%), Postives = 85/104 (81.73%), Query Frame = 1
Query: 4 ADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQ 315
ADEVVLFERATFLVI+H + QH D HRFEKISNI+KQFKLSVSKT +F+GM V+NS FTAFI FT NTYIMVV + P ++ ATT+LNI AAR+HFE+ + Q
Sbjct: 196 ADEVVLFERATFLVISHALQAQHYDAHRFEKISNIIKQFKLSVSKTQAQFQGMEVRNSSFTAFIDSFTANTYIMVVLSDPKIQSATTQLNIRAARRHFEKFVPQ 299
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: A0A485KRM6_9STRA (Aste57867_10915 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRM6_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.700e-37 Identity = 70/105 (66.67%), Postives = 82/105 (78.10%), Query Frame = 1
Query: 1 GADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQ 315
ADEVVLFERATFLVIAH T H DIHRFEKISNI+KQFKLS SKT +F+GM V+NS FTAF+ FT+NTYIMV+ + ++ ATT+LNI AAR FER + Q
Sbjct: 71 NADEVVLFERATFLVIAHATHKNHRDIHRFEKISNIIKQFKLSCSKTQAQFQGMEVRNSNFTAFMDFFTSNTYIMVIMSDDEIQPATTQLNIKAARPVFERYVQQ 175
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: A0A067CTB0_SAPPC (Ras-like GTP-binding protein A n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CTB0_SAPPC) HSP 1 Score: 130 bits (328), Expect = 6.470e-35 Identity = 68/105 (64.76%), Postives = 82/105 (78.10%), Query Frame = 1
Query: 1 GADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQ 315
ADEVVLFERATFLVIA+ T H D+HRFEKISNI+KQFKLS SKT +F+GM V+NS FTA++ FTTNTYIMV+ + ++ ATT+LNI AAR FER + Q
Sbjct: 194 NADEVVLFERATFLVIANATHTTHRDMHRFEKISNIIKQFKLSCSKTQAQFQGMEVRNSNFTAYMDFFTTNTYIMVIMSDGSIQAATTQLNIKAARPVFERYVQQ 298
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: A0A1Y1XDS2_9FUNG (GTP-binding protein n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1XDS2_9FUNG) HSP 1 Score: 130 bits (328), Expect = 6.760e-35 Identity = 66/101 (65.35%), Postives = 79/101 (78.22%), Query Frame = 1
Query: 4 ADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERL 306
ADE+VLFERATFLVI+H T+ H DIHRFEKISNI+KQFKLS SK+ F+ M VKNS FTAFI T NTYIMV+ + P ++ A T +NIN ARKHFE++
Sbjct: 195 ADEIVLFERATFLVISHSTKKPHYDIHRFEKISNIIKQFKLSCSKSQTLFQSMEVKNSNFTAFIDVLTPNTYIMVIMSDPTIQSAATAININVARKHFEKI 295
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: A0A4P9W412_9FUNG (GTP-binding protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W412_9FUNG) HSP 1 Score: 127 bits (318), Expect = 6.980e-35 Identity = 61/101 (60.40%), Postives = 76/101 (75.25%), Query Frame = 1
Query: 4 ADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERL 306
ADEVVLFER TFLVI+H + QH D+HRFEKISNIVKQFKLS SKT +F+ M ++N +F AFI T NTY+MV+ + P ++ A T +NI AAR HFE +
Sbjct: 61 ADEVVLFERTTFLVISHSNQTQHADVHRFEKISNIVKQFKLSCSKTQAQFQSMEIRNPLFAAFIDVLTPNTYVMVIMSDPTIQSAATLINIGAARSHFENI 161
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: D0MTF8_PHYIT (Ras-related GTP-binding protein, putative n=11 Tax=Peronosporaceae TaxID=4777 RepID=D0MTF8_PHYIT) HSP 1 Score: 128 bits (322), Expect = 2.500e-34 Identity = 67/105 (63.81%), Postives = 78/105 (74.29%), Query Frame = 1
Query: 1 GADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQ 315
ADEVVLFERATFLVI+H T H DIHRFEKISNI+KQFKLS SKT +F+GM V+NS FTAFI FT NTYIM++ + ++ AT LNI AAR FE + Q
Sbjct: 163 SADEVVLFERATFLVISHATHTNHRDIHRFEKISNIIKQFKLSCSKTQAQFQGMEVRNSNFTAFIDFFTANTYIMIIMSDDSIQPATIHLNIKAARPVFEEHVQQ 267
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: M4BM95_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BM95_HYAAE) HSP 1 Score: 129 bits (324), Expect = 2.910e-34 Identity = 67/105 (63.81%), Postives = 79/105 (75.24%), Query Frame = 1
Query: 1 GADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQ 315
ADEVVLFERATFLVI+H T H DIHRFEKISNI+KQFKLS SKT +F+GM V+NS FTAFI FT NTYIM++ + ++ AT +LNI AAR FE + Q
Sbjct: 200 SADEVVLFERATFLVISHATHTNHRDIHRFEKISNIIKQFKLSCSKTQAQFQGMEVRNSNFTAFIDFFTANTYIMIIMSDDSIQPATIQLNIKAARPVFEEHVQQ 304
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: H3GWU9_PHYRM (Uncharacterized protein n=14 Tax=Peronosporaceae TaxID=4777 RepID=H3GWU9_PHYRM) HSP 1 Score: 127 bits (320), Expect = 8.070e-34 Identity = 67/105 (63.81%), Postives = 78/105 (74.29%), Query Frame = 1
Query: 1 GADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQ 315
ADEVVLFERATFLVI+H T H DIHRFEKISNI+KQFKLS SKT +F+GM V+NS FTA+I FT NTYIMV+ + ++ AT LNI AAR FE + Q
Sbjct: 184 SADEVVLFERATFLVISHATHTNHRDIHRFEKISNIIKQFKLSCSKTQAQFQGMEVRNSNFTAYIDFFTANTYIMVIMSDDSIQPATIHLNIKAARPVFEEHVQQ 288
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: A0A1X7URV8_AMPQE (Uncharacterized protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7URV8_AMPQE) HSP 1 Score: 128 bits (321), Expect = 8.670e-34 Identity = 66/109 (60.55%), Postives = 80/109 (73.39%), Query Frame = 1
Query: 4 ADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQPGELG 330
ADEV+LFERATFLVIAH + QH DIHRFEKISNIVKQFKLS SK +F+ M V+NS F+AFI FT NTY+MV+ + P + A T +N+ ARKHFE++ G G
Sbjct: 195 ADEVLLFERATFLVIAHSVKRQHSDIHRFEKISNIVKQFKLSCSKLQAQFQSMEVRNSQFSAFIDVFTPNTYVMVIMSDPTIPSAVTLVNVKNARKHFEKIEKMEGGGG 303 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig49172.12097.1 >prot_H-elongata_contig49172.12097.1 ID=prot_H-elongata_contig49172.12097.1|Name=mRNA_H-elongata_contig49172.12097.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp GADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEback to top mRNA from alignment at H-elongata_contig49172:3125..3910- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig49172.12097.1 ID=mRNA_H-elongata_contig49172.12097.1|Name=mRNA_H-elongata_contig49172.12097.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=786bp|location=Sequence derived from alignment at H-elongata_contig49172:3125..3910- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig49172:3125..3910- >mRNA_H-elongata_contig49172.12097.1 ID=mRNA_H-elongata_contig49172.12097.1|Name=mRNA_H-elongata_contig49172.12097.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=714bp|location=Sequence derived from alignment at H-elongata_contig49172:3125..3910- (Himanthalia elongata Himel1 dioecious)back to top |