mRNA_H-elongata_contig49154.12095.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig49154.12095.1
Unique NamemRNA_H-elongata_contig49154.12095.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig49154.12095.1 vs. uniprot
Match: D7FVP6_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVP6_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 1.130e-86
Identity = 164/273 (60.07%), Postives = 193/273 (70.70%), Query Frame = 3 
Query:  276 LRQGLETLGEERMKPQVMPSKPVHSKPSGWSNGRYRVVPAGQNDLDEASALCIKVFFGDADRPWKLVQLRQLKEKQRQDLESRCNEKESVMFKALDSRRDGEMVGFIEVWESSAWKYGMGGGVPQADARPVVSNLAVDPRARRCGIGSALMDACEDTVKKWCFNEIILQVEQDNNDALNFYGGLGFRALFVDRGARRYDTSGFLLRNVRTTKVTMRKALDAEAETQKNGQEKDVAEEVEMLALLLGIFVKPFVAALPRPTTRSRSRSASPSVE 1094
            LR G +    +R KP VM SKPV        + R  VV AG+ DLDEA ALCIKVFFG  D PWK  QLRQL  +QRQDLESRC+ +ESVMFKA+D+RR   MVGF+EV E+S  KYGMG G+  AD RPVVSNLAVDPR RRCG+GSALM+ACED VK W F+EIILQVE+ N  AL FYGG GF+ LFVD+ ARRYDTSGFLL+NVRT+K+TMRKAL +  +  K+G    +A+ V  L    G   KPFV   P P+ R  +RS + SVE
Sbjct:    5 LRPGAKPR-RKRPKPPVMWSKPVRG------SKRLAVVLAGREDLDEAGALCIKVFFGQPDSPWKAAQLRQLLHEQRQDLESRCSRRESVMFKAIDTRRKDGMVGFVEVSETSGSKYGMGAGITLADTRPVVSNLAVDPRVRRCGVGSALMEACEDLVKTWSFDEIILQVEEANEAALAFYGGKGFKKLFVDKAARRYDTSGFLLQNVRTSKLTMRKALGSSTKRSKSGD--SLADHVSQL---FGFLSKPFVVR-PPPSKRLPARSTA-SVE 263
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BLAST of mRNA_H-elongata_contig49154.12095.1 vs. uniprot
Match: A0A6H5L1Z2_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z2_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 6.990e-84
Identity = 165/285 (57.89%), Postives = 195/285 (68.42%), Query Frame = 3 
Query:  240 VDSLTRFGGDQSLRQGLETLGEERMKPQVMPSKPVHSKPSGWSNGRYRVVPAGQNDLDEASALCIKVFFGDADRPWKLVQLRQLKEKQRQDLESRCNEKESVMFKALDSRRDGEMVGFIEVWESSAWKYGMGGGVPQADARPVVSNLAVDPRARRCGIGSALMDACEDTVKKWCFNEIILQVEQDNNDALNFYGGLGFRALFVDRGARRYDTSGFLLRNVRTTKVTMRKALDAEAETQKNGQEKDVAEEVEMLALLLGIFVKPFVAALPRPTTRSRSRSASPSVE 1094
            +D     G    LR G +    +R KP VM SKPV        + R  VV AG+ DLDEA ALCIKVFFG  D PWK  QLRQL ++QRQDLESRC+ +ESVMFKA+D RR   +VGF+EV E S  KYGMG G+  AD RPVVSNLAVDPR +RCG+GSALM+ACED VK W F+EIILQVE+DN  AL FYGG GF  LFVD+ ARRYDTSGFLL+NVRT+K+TMRKAL +  +  K+G    +A+ V  L    G   KPF A  P P+ R  +RS + SVE
Sbjct:  118 IDIYLPGGMGAGLRPGAKPR-RKRPKPPVMWSKPVRG------SKRLAVVLAGREDLDEAGALCIKVFFGQPDSPWKAAQLRQLLQEQRQDLESRCSRRESVMFKAIDIRRKDAIVGFVEVSEISGSKYGMGAGIALADTRPVVSNLAVDPRVQRCGVGSALMEACEDLVKTWNFDEIILQVEEDNEAALAFYGGKGFEKLFVDKAARRYDTSGFLLQNVRTSKLTMRKALGSSTKRSKSGD--SMADHVSHL---FGFLSKPF-AVRPPPSKRLPARSTA-SVE 388
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BLAST of mRNA_H-elongata_contig49154.12095.1 vs. uniprot
Match: A0A6V1N6U1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N6U1_HETAK)

HSP 1 Score: 171 bits (433), Expect = 5.860e-44
Identity = 101/208 (48.56%), Postives = 133/208 (63.94%), Query Frame = 3 
Query:  324 VMPSKPVHSKPSGWSNG-RYRVVPAGQNDLDEASALCIKVFF---GDADRPWKLVQLRQLKEKQRQDLESRCNEKE-SVMFKALDSRRDGEMVGFIEVWESSAWKYGMGGGVPQADARPVVSNLAVDPRARRCGIGSALMDACEDTVKKWCFNEIILQVEQDNNDALNFYGGLGFRALFVDRGARRYDTSGFLLRNVRTTKVTMRKAL 932
            V   K    +PSG   G ++ V  A + DL+  + LC+ VFF        P K VQ  QL ++Q  DL SRC + E S MFKA+ S++ G++VGF+E+   + +KYGMG GV   D RPV++NLAVD   RR GIG AL   C+D V++W ++EI+LQVE+DN  A  FY  LG+  LFVDR ARRY+  G  LRNVRT KVTM+KA+
Sbjct:   84 VFRPKVTAEEPSGILVGDKFEVKEATRKDLEAVTDLCVDVFFPNVASGANPLKGVQRAQLYKEQLSDLSSRCRKMELSNMFKAV-SKQTGKIVGFVEISVQAGYKYGMGDGVVLNDFRPVLTNLAVDLDCRRQGIGQALEQQCQDAVREWGYDEIVLQVEEDNAGARAFYRTLGYADLFVDRAARRYNAGGLWLRNVRTAKVTMQKAI 290
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BLAST of mRNA_H-elongata_contig49154.12095.1 vs. uniprot
Match: A0A7S2DA34_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DA34_9STRA)

HSP 1 Score: 159 bits (403), Expect = 4.400e-41
Identity = 90/193 (46.63%), Postives = 120/193 (62.18%), Query Frame = 3 
Query:  366 SNGRYRVVPAGQNDLDEASALCIKVFFGDADRPWKLVQLRQLKEKQRQDLESRCNE-KESVMFKALDSRRDGEMV-GFIEVWESSAWKYGMGGGVPQADARPVVSNLAVDPRARRCGIGSALMDACEDTVKKWCFNEIILQVEQDNNDALNFYGGLGFRALFVDRGARRYDTSGFLLRNVRTTKVTMRKALDA 938
            S G + +V   + DL+ A+ LC++VFFG+    WK  QLR+L  +Q  DL  + N   +S++FK  +    GE++ GF E+  S      +   +P  D RPV+SNLAV    RR GIGS LM  CE+  ++W F E++LQVE+DN +A   Y  LG+R LF DR ARRYDTSGF LRNVRT K T+ K LDA
Sbjct:   32 SRGDFNLVEVTRKDLEPAAKLCVQVFFGNDTSWWKQSQLRRLYAEQLLDLTDKFNRPSKSILFKVTEMDATGEIIIGFAEL--SMCRGLRVCSTLPVLDERPVLSNLAVRENRRRRGIGSLLMQECENAAQRWGFTEVVLQVEEDNREARALYQALGYRELFTDRTARRYDTSGFFLRNVRTAKTTLSKPLDA 222
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BLAST of mRNA_H-elongata_contig49154.12095.1 vs. uniprot
Match: A0A7S2CSX5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CSX5_9STRA)

HSP 1 Score: 144 bits (364), Expect = 5.020e-36
Identity = 81/174 (46.55%), Postives = 110/174 (63.22%), Query Frame = 3 
Query:  414 EASALCIKVFFGDADRPWKLVQLRQLKEKQRQDLESRCNEKE-SVMFKALDSRRDGEMVGFIEVWESSAWKYGMGGGVPQADARPVVSNLAVDPRARRCGIGSALMDACEDTVKKWCFNEIILQVEQDNNDALNFYGGLGFRALFVDRGARRYDTSGFLLRNVRTTKVTMRKAL 932
            +A+ LC+  FFG A  PWK  QLRQL E+Q  DL ++    E S +FKA  +   GE V F E+  S+  +  +G  +P AD RPV++NLAV    RR G+G+ L+   E+T   W F+E++LQVE+DN    +FY  LG+  LF D  +RRYD S F LRNVRT+K+T+RK L
Sbjct:    1 QATQLCVTAFFGQATSPWKSAQLRQLYEEQLADLTAKSRRPEDSRLFKA--TAPSGEFVAFAELSISTGLR-SLGSSIPVADRRPVLANLAVQSSWRRRGVGAVLVRRLEETAVDWGFHEMLLQVEEDNQVGRSFYSSLGYVELFTDPASRRYDASSFFLRNVRTSKMTLRKEL 171
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BLAST of mRNA_H-elongata_contig49154.12095.1 vs. uniprot
Match: K8Z711_NANGC (Gcn5-related n-acetyltransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z711_NANGC)

HSP 1 Score: 140 bits (352), Expect = 2.420e-33
Identity = 82/184 (44.57%), Postives = 117/184 (63.59%), Query Frame = 3 
Query:  399 QNDLDEASALCIKVFFGDADR--PWKLVQLRQLKEKQRQDLESRCNEKE---SVMFKALDSRRDGEMVGFIEVWESSAWKYGMGG-GVPQADARPVVSNLAVDPRARRCGIGSALMDACEDTVKKWCFNEIILQVEQDNNDALNFYGGLGFRALFVDRGARRYDTSGFLLRNVRTTKVTMRKAL 932
            + DL  A+++CI+ FFG ADR  P + +QL  L ++Q  DL SR   +    S+  +A+D+  DG MVGF+EV  + + KYGM   GVP  D RP ++NL+V P  RR G+G  L+ ACE+ V+ W ++E+ILQVE  N  A N Y  +G+  L+ D   R+Y+ SG  ++NVR  KVT+RKAL
Sbjct:   88 RQDLRLAASVCIESFFGTADRLNPVRSMQLATLLDEQFADLRSRFGGRAVGGSLYLQAVDA--DGAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPALRRQGVGRRLVHACEEMVRTWGYDELILQVEDSNQQARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKAL 269
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BLAST of mRNA_H-elongata_contig49154.12095.1 vs. uniprot
Match: A0A4D9CYN2_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYN2_9STRA)

HSP 1 Score: 142 bits (357), Expect = 4.400e-32
Identity = 83/184 (45.11%), Postives = 118/184 (64.13%), Query Frame = 3 
Query:  399 QNDLDEASALCIKVFFGDADR--PWKLVQLRQLKEKQRQDLESRCNEKE---SVMFKALDSRRDGEMVGFIEVWESSAWKYGMGG-GVPQADARPVVSNLAVDPRARRCGIGSALMDACEDTVKKWCFNEIILQVEQDNNDALNFYGGLGFRALFVDRGARRYDTSGFLLRNVRTTKVTMRKAL 932
            + DL  A+++CI+ FFG ADR  P + +QL  L ++Q  DL SR   +    SV  +A+D+  DG MVGF+EV  + + KYGM   GVP  D RP ++NL+V P +RR G+G  L+ ACE+ V+ W ++E+ILQVE  N  A N Y  +G+  L+ D   R+Y+ SG  ++NVR  KVT+RKAL
Sbjct:  333 RQDLRLAASVCIESFFGTADRLNPVRSMQLATLLDEQFADLRSRFGGRAVGGSVYLQAVDA--DGAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPASRRQGVGRRLVHACEEMVRSWGYDELILQVEDSNQHARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKAL 514
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BLAST of mRNA_H-elongata_contig49154.12095.1 vs. uniprot
Match: A0A836C8B6_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B6_9STRA)

HSP 1 Score: 130 bits (328), Expect = 6.930e-32
Identity = 62/101 (61.39%), Postives = 78/101 (77.23%), Query Frame = 3 
Query:  630 MGGGVPQADARPVVSNLAVDPRARRCGIGSALMDACEDTVKKWCFNEIILQVEQDNNDALNFYGGLGFRALFVDRGARRYDTSGFLLRNVRTTKVTMRKAL 932
            MG  +P+AD RPV+SNLAV PR RR GIGS+L+ AC++ V  W + E++LQVE+DN  A  FY  +GF  LFVDR ARRYDTSGFLL+NVR +K+T+RK L
Sbjct:    1 MGDNIPEADVRPVISNLAVSPRMRRFGIGSSLLKACQEEVLSWGYQELVLQVEEDNAGARAFYQRMGFDTLFVDRAARRYDTSGFLLQNVRCSKLTLRKLL 101
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BLAST of mRNA_H-elongata_contig49154.12095.1 vs. uniprot
Match: A0A7S2V3S6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3S6_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.620e-24
Identity = 52/93 (55.91%), Postives = 69/93 (74.19%), Query Frame = 3 
Query:  654 DARPVVSNLAVDPRARRCGIGSALMDACEDTVKKWCFNEIILQVEQDNNDALNFYGGLGFRALFVDRGARRYDTSGFLLRNVRTTKVTMRKAL 932
            D RPV++NLAV+   RR G+G AL+ +CE  V++W ++EI+LQVE++N  A  FY  LGF  LFVD+ ARRYDT+G  LRNVRTTK+ M+K  
Sbjct:    7 DFRPVLANLAVNSDVRRRGVGRALVRSCESRVQEWGYSEIVLQVEEENEAARLFYQNLGFDTLFVDKAARRYDTTGLFLRNVRTTKICMQKVF 99
[Close]
BLAST of mRNA_H-elongata_contig49154.12095.1 vs. uniprot
Match: A0A7S2KVZ6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KVZ6_9STRA)

HSP 1 Score: 113 bits (283), Expect = 8.370e-24
Identity = 90/253 (35.57%), Postives = 124/253 (49.01%), Query Frame = 3 
Query:  399 QNDLDEASALCIKVFFGDAD------RPWKLVQLRQLKEKQRQDLESRC-------NEKESVMFKA-----LDSRRD----------------------------------GEMVGFIEVWESSAWKYGMGGG---VPQAD--ARPVVSNLAVDPRARRCGIGSALMDACEDTVKK-W--CFNEIILQVEQDNNDALNFYGGLGFRALFVDRGARRYDTSGFLLRNVRTTKVTMRKALDAEAETQKNGQEKDV 977
            +   +E S++CI  FF D         PWK +QL  L+  Q  DL  R        +++++ MF A     L S  D                                  GE++GF EV   +A  +G+G     +P      RP+++NLAV   ARR G+G AL+ A ED ++  W   F+E++LQVE+DN   L FY  LGF ALF D   RRYDTSG  L+ VRTTK+ MRKA+  ++E   NG+  DV
Sbjct:   58 KRQFEEISSMCIDAFFNDGVDENDFVAPWKSLQLAYLRNAQYSDLMMRKFNFGRADSKQKNQMFVARRVVVLSSDADSSGGNNVSVSPNDVYNLGQLNVNGYKIDEVQLSAGEVLGFCEV---TARPFGLGAADAVLPDGKNKTRPIITNLAVRADARRSGMGKALVCAVEDDIRTCWDNAFDEVVLQVEEDNVGGLRFYEKLGFEALFADPSCRRYDTSGVFLQQVRTTKICMRKAIPLDSE---NGRVNDV 304
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49154.12095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVP6_ECTSI1.130e-8660.07N-acetyltransferase domain-containing protein n=1 ... [more]
A0A6H5L1Z2_9PHAE6.990e-8457.89N-acetyltransferase domain-containing protein n=1 ... [more]
A0A6V1N6U1_HETAK5.860e-4448.56Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2DA34_9STRA4.400e-4146.63Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2CSX5_9STRA5.020e-3646.55Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
K8Z711_NANGC2.420e-3344.57Gcn5-related n-acetyltransferase n=2 Tax=Nannochlo... [more]
A0A4D9CYN2_9STRA4.400e-3245.11N-acetyltransferase domain-containing protein n=1 ... [more]
A0A836C8B6_9STRA6.930e-3261.39N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S2V3S6_9STRA1.620e-2455.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2KVZ6_9STRA8.370e-2435.57Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49154contigH-elongata_contig49154:2..3776 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score288.5
Seed ortholog evalue4.2e-75
Seed eggNOG ortholog2880.D7FVP6
EggNOG free text desc.Acetyltransferase (GNAT) domain
EggNOG OGs2E4IJ@1,2SBET@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size2189
Cds size1056
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930808.5185535-UTR-H-elongata_contig49154:1..10271622930808.5185535-UTR-H-elongata_contig49154:1..1027Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig49154 2..1027 -
1691679579.3303163-UTR-H-elongata_contig49154:1..10271691679579.3303163-UTR-H-elongata_contig49154:1..1027Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig49154 2..1027 -
1622930808.660988-UTR-H-elongata_contig49154:3669..37761622930808.660988-UTR-H-elongata_contig49154:3669..3776Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig49154 3670..3776 -
1691679579.388544-UTR-H-elongata_contig49154:3669..37761691679579.388544-UTR-H-elongata_contig49154:3669..3776Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig49154 3670..3776 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930808.5332592-CDS-H-elongata_contig49154:1027..12641622930808.5332592-CDS-H-elongata_contig49154:1027..1264Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49154 1028..1264 -
1691679579.3446677-CDS-H-elongata_contig49154:1027..12641691679579.3446677-CDS-H-elongata_contig49154:1027..1264Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49154 1028..1264 -
1622930808.544772-CDS-H-elongata_contig49154:1886..20301622930808.544772-CDS-H-elongata_contig49154:1886..2030Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49154 1887..2030 -
1691679579.3527184-CDS-H-elongata_contig49154:1886..20301691679579.3527184-CDS-H-elongata_contig49154:1886..2030Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49154 1887..2030 -
1622930808.5595772-CDS-H-elongata_contig49154:2434..26481622930808.5595772-CDS-H-elongata_contig49154:2434..2648Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49154 2435..2648 -
1691679579.360864-CDS-H-elongata_contig49154:2434..26481691679579.360864-CDS-H-elongata_contig49154:2434..2648Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49154 2435..2648 -
1622930808.576146-CDS-H-elongata_contig49154:2925..30561622930808.576146-CDS-H-elongata_contig49154:2925..3056Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49154 2926..3056 -
1691679579.3704078-CDS-H-elongata_contig49154:2925..30561691679579.3704078-CDS-H-elongata_contig49154:2925..3056Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49154 2926..3056 -
1622930808.588489-CDS-H-elongata_contig49154:3339..36691622930808.588489-CDS-H-elongata_contig49154:3339..3669Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49154 3340..3669 -
1691679579.3805122-CDS-H-elongata_contig49154:3339..36691691679579.3805122-CDS-H-elongata_contig49154:3339..3669Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49154 3340..3669 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49154.12095.1prot_H-elongata_contig49154.12095.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig49154 1028..3669 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig49154.12095.1

>prot_H-elongata_contig49154.12095.1 ID=prot_H-elongata_contig49154.12095.1|Name=mRNA_H-elongata_contig49154.12095.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=352bp
MVIGPRSSASPEFDARKRGGIDKEALQRNQCRAVTVAFAAAGAAVDSLTR
FGGDQSLRQGLETLGEERMKPQVMPSKPVHSKPSGWSNGRYRVVPAGQND
LDEASALCIKVFFGDADRPWKLVQLRQLKEKQRQDLESRCNEKESVMFKA
LDSRRDGEMVGFIEVWESSAWKYGMGGGVPQADARPVVSNLAVDPRARRC
GIGSALMDACEDTVKKWCFNEIILQVEQDNNDALNFYGGLGFRALFVDRG
ARRYDTSGFLLRNVRTTKVTMRKALDAEAETQKNGQEKDVAEEVEMLALL
LGIFVKPFVAALPRPTTRSRSRSASPSVENPKSGSGSRTVPRPLGSDERG
S*
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mRNA from alignment at H-elongata_contig49154:2..3776-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig49154.12095.1 ID=mRNA_H-elongata_contig49154.12095.1|Name=mRNA_H-elongata_contig49154.12095.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3775bp|location=Sequence derived from alignment at H-elongata_contig49154:2..3776- (Himanthalia elongata Himel1 dioecious)
GGAAATTACGAGGCGGTTTCCCCGCCAGCGAACCTGTGGTCGCGGACCAG
GAAGATGAGTCGGTCTGGCGTCGACTCGCGCCAACCGTGGGGGCGAAGCG
AGGGGGGATGGTGATCGGTCCCAGATCCTCTGCTAGTCCAGAGTTCGACG
CGAGAAAACGTGGCGGGATCGATAAGGAGGCGCTTCAAAGAAATCAGTGC
CGCGCTGTCACTGTTGCGTTTGCGGCAGCAGGTGCCGCAGTCGATTCTCT
TACTCGATTTGGTGGGGACCAGAGCCTCCGGCAAGGGCTGGAGACATTGG
GGGAAGAGCGAATGAAGCCTCAAGTAATGCCGTCCAAGCCCGTGCACAGC
AAGCCATCGGGGTGGTCGAACGGGAGGTATCGCGTGGTCCCGGCGGGGCA
AAACGATCTCGACGAGGCGAGCGCTTTGTGCATCAAGGTACAGGGTCCGT
CTAAAAAGAATTATGGTAGCACAGAGGGGTAATGACAATCCCTCGCGCGA
GCAGCGAGTTCTTCCACGCCTTCGGTTTCCCTTTGGAGATAGCTGCAAAT
AGTCAGATTGGTTCGCTCTAGGGGTACCGCTGTAGGCGTACCGCTATTCA
ATAGTAGGGTTCACTTCACGGTCGTCGTATCACGACCGTCTTTTTCCGAT
GGAGATCGAAGCTCAAACCCTGGCCTCCGCTGGGCGTACCGTGCGCCCAT
GCCACATTATATTATGTTAGGTATTCTTCGGAGATGCCGACAGACCGTGG
AAACTCGTGCAGCTTCGACAGCTCAAGGAGAAGCAGCGACAAGACTTGGA
GTCGCGGTGTAACGAAAAGGAAAGCGTAATGTTCAAGGCACTTGACAGCA
GGCGAGGAGTTGTTTTTTGTCTGTTTGTTTTTGTCGCCCCCACTTCACAC
GCGTCATCAAAAAGTTTTGCATGTCTTTGTTGTTTAACTGGCGCAAGACG
CAACGTAATCCGCCCCTGGGCGTTCTCATGTACGCACGCGGTCGACCTCG
CATGCTCATCGCGCCGAATAAAAAAAAGCATTAAGCTGGCGACGGTGTTC
CTGCTTCCCCTGCTTCCTTCGATTGGTCATCTCCGATTATATTGTTTCGA
TGTCTCTATTGTTGTTGGGGTGTCTCAGGAGAGACGGGGAGATGGTCGGA
TTCATCGAGGTGTGGGAGTCATCGGCGTGGAAGTACGGCATGGGGGGAGG
GGTTCCGCAGGCGGACGCTCGGCCTGTCGTGTCGAACCTCGCCGTTGATC
CGCGAGCCAGGCGGTGTGGGATCGGCTCTGCCCTCATGGACGCTTGCGAG
GACACGGTGAAGAAATGGTGCTTCAACGAAATTATCCTGCAGGTACCGTA
CACGCGCACACATGCATCCGGCGTAGGTGAGGTGGTTTTTGACATCAAGT
GGTTTGCTCTTGACGTCATCGTATCTATGGCAGGAATAATTTAAATTCTA
GGAATCAGCTCTTGGTAGGGCGGGGGGGAGGTGGAGCCTCCGGCGCGATC
ACCTCGCACACAAGCTAAGCCGAGGAATGCAAGTATAGCACATGTCTGCA
AGCGTCACCAAACGTACGTACTCGTGGGACCACGTGGCGGCCTACGGCAA
CACTCTTGATATTGTCTTGATGACGCGAATTTAATTTGTCCTCGTTAGCA
TGAGCACCAGCTGAGGCGTTATTTTGTCCTCGGAAACAACGCGGGCAAAG
AGTGTCCACCGACCGTGCCGAATTGTGTGGCTCTTGTGGTGCGTAGGTGG
AGCAGGATAACAACGATGCGCTGAATTTCTACGGCGGATTGGGTTTCCGC
GCGCTATTCGTGGACAGGGGCGCACGACGGTACGACACGAGCGGGTTCCT
CCTGCGGAACGTGCGAACCACCAAGGTCACAATGCGGAAGGTAGGATGTG
CAGCATGTAAGGGCCACAAGTTTTCATGGCGCGCGGGCTTCGTGACAGTG
ACAACACAGCCTTTTGTAGTCATCTCATCCGATCGACTTTCGTGACACAT
GGCTTTCATACCGCCCCGGCATTCACGACATATGACTTCCCGCAAGAAAC
TAATTTCGTGACAGTGACAACGATCATGACAGACAACATCTTTCAGGTAT
CAGAAGCCCGGAATATACGTCTCCGTCATCCGAAAAATCAAATCCACGCT
TTTGTCGCCACTTGGACATCCCGTGGTTCTCCGAAGCTTACTCGTCCGCG
CGCCCGCGCACGAGTGATCAAGGGAAATGACGTTTGCATGACCCTGTCAC
CAAGGGGCGAAGTGACCATGTGCTTGAGTGTGCGCGAAAGAGACGGGGGG
GGAGGCTTCTACCACGGAAATTTGCTCCCGGTGCCCCCCTCTGTTGTACG
GTACAGTATGTAGTTCCAAGAGCTTTGATCTATAATCTAATGCGCTTATC
CCCTCTTCCCGGAGAGGTATGCTGGTATATAATATGAAACCCTTACCGCA
GCACAACCTACTATAATATTTATTACCACTTATGCCATGCTTGTCCTCTT
GGCAAAGTGCAGGCTCTTGACGCAGAGGCGGAGACACAAAAAAACGGTCA
AGAAAAAGACGTCGCTGAAGAAGTTGAAATGCTCGCGCTACTGCTGGGCA
TCTTCGTGAAGCCCTTCGTCGCGGCGCTTCCCCGCCCCACCACGCGTTCG
CGCTCCCGGTCGGCCTCGCCTTCAGTAGAAAACCCCAAGTCGGGAAGTGG
TTCTAGGACGGTCCCACGCCCGTTAGGCAGCGACGAACGCGGTAGTTAAA
GAGGTCGAGTTGTATAACGTCTGCGTCGACACTTCGGACGGGCTTGTGTT
GATGAGAAGGCTTCCTTGCGTTCTCGCCCGGTCTTTTGTTTGCGCTTCGG
ATTGGCTGTCTCGGGAGAATGTGGTCCCGAGAGGGAAGGCAACGCCTACT
CAAAAAGGAGAAAGGCTCGCTGTGCTGTGTGAAGATGCGACAGCTTGATC
GATGCCGTCACGCCTCGAGTTACACAGAGGACGATTACCCGTATCGACGT
TTTTGCCGACACGCTGCCCCAGCTTTGGTGCCTCGAAGCAAGTCGCGTTG
TCTACCGGGCATATATATTAGTAATAATTGTTGTAGTAGTTATTTAAGTC
TCTGACGGAGGTGAGGAAATGCGGACGCATCCATGTGGCGGGAGTCAAGT
AGTGTCAAATAGCCCCCAGACACGCCGCGCGACTTGTTTTTTGCGCGCAC
TGAAAACATGCTCGAAGGGAAACCCCACCCATATTGAGTGCCCAATCTGT
GTCATTGGTAGGAGGATGGCGAGGGGGGGTTGGTAGCGGGAGGCGCGCAT
AATTGTATACTTATCAAGCGCAACTGCCGCCGTTGGTCCTTCGAGGCTTT
TAAAGGAGTGTCTAGGGATTTCCTGGGGATAAGTGAGTTGGCCATAATCT
TCTCATGGGCTCCCACATTCCGAGAGATGCAAGTAAGACACACTCGCGAG
GAGATGACCGGATGATTTCTGCGCCTAATGAGGATGTAAAGCCAGAAATA
ATCGCTTGTGATTCATTCTTGCTGATGCACGTCTGACCGCAAGGCCCGCG
TGTACTGGTAGAGTTGGGTCGCATTCGGTGCGTCAGGTACAAATGAGTAG
ACTCGCGAGCCTTCTGACTCTGTGGTAGTACAGCAATTTACATCGGCTCA
TTTGTGCGCGGAGGCAGGCGCGACCGAAGGCTACAAGACCGCGTATGGCT
CTAGGATTTCGTGGAAGGAGCTGTATTTTGTCTAGAGGCCGGGATTCGCC
GCCACAGGAGGAGGAAGACGGGCTG
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Coding sequence (CDS) from alignment at H-elongata_contig49154:2..3776-

>mRNA_H-elongata_contig49154.12095.1 ID=mRNA_H-elongata_contig49154.12095.1|Name=mRNA_H-elongata_contig49154.12095.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2112bp|location=Sequence derived from alignment at H-elongata_contig49154:2..3776- (Himanthalia elongata Himel1 dioecious)
ATGGTGATCGGTCCCAGATCCTCTGCTAGTCCAGAGTTCGACGCGAGAAA
ACGTGGCGGGATCGATAAGGAGGCGCTTCAAAGAAATCAGTGCCGCGCTG
TCACTGTTGCGTTTGCGGCAGCAGGTGCCGCAGTCGATTCTCTTACTCGA
TTTGGTGGGGACCAGAGCCTCCGGCAAGGGCTGGAGACATTGGGGGAAGA
GCGAATGAAGCCTCAAGTAATGCCGTCCAAGCCCGTGCACAGCAAGCCAT
CGGGGTGGTCGAACGGGAGGTATCGCGTGGTCCCGGCGGGGCAAAACGAT
CTCGACGAGGCGAGCGCTTTGTGCATCAAGATGGTGATCGGTCCCAGATC
CTCTGCTAGTCCAGAGTTCGACGCGAGAAAACGTGGCGGGATCGATAAGG
AGGCGCTTCAAAGAAATCAGTGCCGCGCTGTCACTGTTGCGTTTGCGGCA
GCAGGTGCCGCAGTCGATTCTCTTACTCGATTTGGTGGGGACCAGAGCCT
CCGGCAAGGGCTGGAGACATTGGGGGAAGAGCGAATGAAGCCTCAAGTAA
TGCCGTCCAAGCCCGTGCACAGCAAGCCATCGGGGTGGTCGAACGGGAGG
TATCGCGTGGTCCCGGCGGGGCAAAACGATCTCGACGAGGCGAGCGCTTT
GTGCATCAAGGTATTCTTCGGAGATGCCGACAGACCGTGGAAACTCGTGC
AGCTTCGACAGCTCAAGGAGAAGCAGCGACAAGACTTGGAGTCGCGGTGT
AACGAAAAGGAAAGCGTAATGTTCAAGGCACTTGACAGCAGGTATTCTTC
GGAGATGCCGACAGACCGTGGAAACTCGTGCAGCTTCGACAGCTCAAGGA
GAAGCAGCGACAAGACTTGGAGTCGCGGTGTAACGAAAAGGAAAGCGTAA
TGTTCAAGGCACTTGACAGCAGGAGAGACGGGGAGATGGTCGGATTCATC
GAGGTGTGGGAGTCATCGGCGTGGAAGTACGGCATGGGGGGAGGGGTTCC
GCAGGCGGACGCTCGGCCTGTCGTGTCGAACCTCGCCGTTGATCCGCGAG
CCAGGCGGTGTGGGATCGGCTCTGCCCTCATGGACGCTTGCGAGGACACG
GTGAAGAAATGGTGCTTCAACGAAATTATCCTGCAGGAGAGACGGGGAGA
TGGTCGGATTCATCGAGGTGTGGGAGTCATCGGCGTGGAAGTACGGCATG
GGGGGAGGGGTTCCGCAGGCGGACGCTCGGCCTGTCGTGTCGAACCTCGC
CGTTGATCCGCGAGCCAGGCGGTGTGGGATCGGCTCTGCCCTCATGGACG
CTTGCGAGGACACGGTGAAGAAATGGTGCTTCAACGAAATTATCCTGCAG
GTGGAGCAGGATAACAACGATGCGCTGAATTTCTACGGCGGATTGGGTTT
CCGCGCGCTATTCGTGGACAGGGGCGCACGACGGTACGACACGAGCGGGT
TCCTCCTGCGGAACGTGCGAACCACCAAGGTCACAATGCGGAAGGTGGAG
CAGGATAACAACGATGCGCTGAATTTCTACGGCGGATTGGGTTTCCGCGC
GCTATTCGTGGACAGGGGCGCACGACGGTACGACACGAGCGGGTTCCTCC
TGCGGAACGTGCGAACCACCAAGGTCACAATGCGGAAGGCTCTTGACGCA
GAGGCGGAGACACAAAAAAACGGTCAAGAAAAAGACGTCGCTGAAGAAGT
TGAAATGCTCGCGCTACTGCTGGGCATCTTCGTGAAGCCCTTCGTCGCGG
CGCTTCCCCGCCCCACCACGCGTTCGCGCTCCCGGTCGGCCTCGCCTTCA
GTAGAAAACCCCAAGTCGGGAAGTGGTTCTAGGACGGTCCCACGCCCGTT
AGGCAGCGACGAACGCGGTAGTTAAGCTCTTGACGCAGAGGCGGAGACAC
AAAAAAACGGTCAAGAAAAAGACGTCGCTGAAGAAGTTGAAATGCTCGCG
CTACTGCTGGGCATCTTCGTGAAGCCCTTCGTCGCGGCGCTTCCCCGCCC
CACCACGCGTTCGCGCTCCCGGTCGGCCTCGCCTTCAGTAGAAAACCCCA
AGTCGGGAAGTGGTTCTAGGACGGTCCCACGCCCGTTAGGCAGCGACGAA
CGCGGTAGTTAA
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