mRNA_H-elongata_contig49036.12080.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig49036.12080.1 vs. uniprot
Match: D7FTQ1_ECTSI (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTQ1_ECTSI) HSP 1 Score: 586 bits (1511), Expect = 1.620e-194 Identity = 282/396 (71.21%), Postives = 324/396 (81.82%), Query Frame = 1
Query: 1 IVRTTSEEAAVYPDQRKVIQYVDYADGWDSSGHGTHVAGIAAGKITEDWETKWTDELSPEICEDVNMTLSCLGVCVGDMAATSCHWNPELACPISNCDEDISCDEYTDYIFPCFGDPDEEIPAASGMAPGAKLAFFDIGTSDGSLTIPDDVAEMWDAQYAAGARVMSNSWSLVTMTEPSSRDVELDEWIHDHPDALVVFGAGNNGYDNGGFNPGSVQSPATAKTAMTVGASNSGPERAYAYYTTASSNFDGVLWPYDDVSFEVSPYSARGPVGDFTMKPDLVAPGLMVHSAKASLTEEGQETCALDSLGGTSMSAPAIAGAAALVRQYFSGGVLADYLDEEGLC---DE--------GGAYEKAGLCEAFEPSGYLVKAVLVNSAVWLGDMQTVSY 1155
+ RTT A YPDQRKVIQYV +AD D+ GHGTHVAGIAAGK+ +DWE W ++S E+C+D + +SC G CV SCHWNPEL+CP+S+CDED+SCD+YT Y FPCF DP +E+P ASG+A A+LAFFDIG DG L IPDD+ +MWDAQYAAGARV+SNSWSLVTMTEP++RDV+LDEW+HDHPD LVVFGAGNNG+++ GFNPGSVQSPAT KTAMTVGASNSGP RAYAYY A+SNFDGVLWP D+ F+VSP+SARGPVG FT KPD+VAPGLMVHSAKASL++ G+ETCALDSLGGTSMSAPA+AGAAALVRQ+F G LA YLD GLC DE GG Y +AGLCEAF PSGYLVKAVLVNSA+WLGDMQ VSY
Sbjct: 516 VPRTTMALAEYYPDQRKVIQYVVFADDTDTDGHGTHVAGIAAGKVYDDWEEAWVGDVSKEVCDDAGLIMSCFGDCVAGTMGGSCHWNPELSCPMSDCDEDVSCDDYTQYDFPCFEDPVDELPEASGVASDAQLAFFDIGNEDGGLVIPDDIGDMWDAQYAAGARVISNSWSLVTMTEPTARDVQLDEWVHDHPDTLVVFGAGNNGFEDHGFNPGSVQSPATGKTAMTVGASNSGPGRAYAYYDDAASNFDGVLWPSDEEMFQVSPFSARGPVGRFTAKPDVVAPGLMVHSAKASLSDPGEETCALDSLGGTSMSAPAVAGAAALVRQFFEQGFLASYLDGAGLCGGTDENEEVVAAAGGVYAEAGLCEAFAPSGYLVKAVLVNSAMWLGDMQMVSY 911
BLAST of mRNA_H-elongata_contig49036.12080.1 vs. uniprot
Match: W7TM23_9STRA (Subtilisin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM23_9STRA) HSP 1 Score: 193 bits (491), Expect = 7.670e-51 Identity = 144/393 (36.64%), Postives = 206/393 (52.42%), Query Frame = 1
Query: 1 IVRTTSEEAAVYPDQRKVIQYVDYADGWDS-SGHGTHVAGIAAGKITEDWETKWTDELSPEICEDVNMTLSCLGVCVG-------DMAATSC-------HWNPELACPISNCDEDISCDEYTDYI-FPCFGDPDEEIPAASGMAPGAKLAFFDIGTSDGSLTIPDDVAEM-WDAQYAAGARVMSNSWSLVTMTEPSSRDVELDEWIHDHPDALVVFGAGNNGYDNGGFNPGSVQSPATAKTAMTVGASNSGPERAYAYYTTASSNFDGVLWPYDDVSFEVSPYSARGPVGDFTMKPDLVAPGLMVHSAKASLTEEGQETCALDSLGGTSMSAPAIAGAAALVRQYFSGGVLADYLDEEGLCDEGGAYEKAGLCE-AFEPSGYLVKAVLVNSAV 1125
+ R++ E QRKV+QYV + DG D GHGTHV+G AG + E + C + TL+C G+C+ D SC H + ACP+ CD D + C +P+E + A GMA AK+AFFDI G+L+ P D M + Y AGAR+ SNSW + + E D+++D++ ++H D L+++ AGN G D GF+ S+ SP K +TVGA+ SGPER S + D + + +S+RGP D +KPD+V+PG ++SA+++ G TC+ ++ GTSM+AP +AGAAAL+RQYF G L G C G Y+ CE +PS L+KA+ VNSAV
Sbjct: 503 VARSSWEAPFTDMTQRKVVQYVSFVDGGDLVEGHGTHVSGSLAGVVEPRNEGR-----RGHFCAE-GETLACTGMCLSAPTCQLKDYGYVSCQDWLQDGHCDAWFACPLYGCDGG-------DCVGLACNPNPEEALMANQGMAREAKIAFFDIADEHGNLSTPSDFHRMLFPPAYEAGARIHSNSWGI-NVGEYLFDDMKIDQYAYEHQDFLIIYAAGNYGED--GFH--SIGSPGNTKNVLTVGATESGPERQ-------SQDRDYI-----------AKFSSRGPTKDGRLKPDIVSPGSYIYSARSAGYNNGG-TCSYVAMAGTSMAAPVVAGAAALIRQYFKEGHYYAALRARGEC--GPPYQ----CEDVIQPSAPLLKALFVNSAV 852
BLAST of mRNA_H-elongata_contig49036.12080.1 vs. uniprot
Match: A0A4D9D243_9STRA (Subtilisin n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D243_9STRA) HSP 1 Score: 190 bits (482), Expect = 1.110e-49 Identity = 141/393 (35.88%), Postives = 205/393 (52.16%), Query Frame = 1
Query: 1 IVRTTSEEAAVYPDQRKVIQYVDYADGWDS-SGHGTHVAGIAAGKITEDWETKWTDELSPEICEDVNMTLSCLGVCVG-------DMAATSC-------HWNPELACPISNCDEDISCDEYTDYI-FPCFGDPDEEIPAASGMAPGAKLAFFDIGTSDGSLTIPDDVAEM-WDAQYAAGARVMSNSWSLVTMTEPSSRDVELDEWIHDHPDALVVFGAGNNGYDNGGFNPGSVQSPATAKTAMTVGASNSGPERAYAYYTTASSNFDGVLWPYDDVSFEVSPYSARGPVGDFTMKPDLVAPGLMVHSAKASLTEEGQETCALDSLGGTSMSAPAIAGAAALVRQYFSGGVLADYLDEEGLCDEGGAYEKAGLCE-AFEPSGYLVKAVLVNSAV 1125
+ R++ E QRKV+QYV + DG D GHGTHV+G AG + E + +C + TL+C G+C+ + SC H + ACP+ CD D + C +P+E + A GMA AK+AFFDI G+L+ P D M + Y AGAR+ SNSW + + E +++D++ ++H D L+++ AGN G D GF+ S+ SP K +TVGA+ SGPER + N+ ++ +S+RGP D +KPD+V+PG ++SA+++ G TC+ + GTSM+AP +AGAAAL+RQYF G L G C G Y+ CE +PS L+KA+ VNSAV
Sbjct: 176 VARSSWEAPFTDMTQRKVVQYVSFVDGGDLVEGHGTHVSGSLAGVVEPRNEGR-----RGHVCAE-GETLACTGMCLSAPTCQLKEYGYVSCQDWLQDGHCDAWFACPLYGCDGG-------DCVGLACNPNPEEALMANQGMAREAKIAFFDIADEHGNLSTPSDFHRMLFPPAYEAGARIHSNSWGI-NVGEYLFDAMKIDQYAYEHQDFLIIYAAGNYGED--GFH--SIGSPGNTKNVLTVGATESGPERQ-----SQDRNY-------------IAKFSSRGPTKDGRLKPDIVSPGSYIYSARSAGYNNGG-TCSYVGMAGTSMAAPLVAGAAALIRQYFKEGHYYAALRARGEC--GPPYQ----CEDVIQPSAPLLKALFVNSAV 525
BLAST of mRNA_H-elongata_contig49036.12080.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE) HSP 1 Score: 175 bits (444), Expect = 1.170e-44 Identity = 133/379 (35.09%), Postives = 193/379 (50.92%), Query Frame = 1
Query: 40 DQRKVIQYVDYADGWDSSGHGTHVAGIAAGKITEDWETKWTDELSPEICEDVNMTLSCLGVCVG--------DMAAT---SCHWNPELACPISNCDEDISCDEYTDYIFPCFGDPDEE-IPAASGMAPGAKLAFFDIGTSDGSLTIPDDVAEMWDAQYAAGARVMSNSWSLVTMTEPSSRDVELDEWIHDHPDALVVFGAGNNGYDNGGFNPGSVQSPATAKTAMTVGASNSGPER-AYAYYTTASSNFDGVLWPYDDVSFEVSPYSARGPVGDFTMKPDLVAPGLMVHSAKASLTEEGQETCALDSLGGTSMSAPAIAGAAALVRQYFSGGVL-ADYLDEEGLCDEGGAYEKAGLCEAFEPSGYLVKAVLVNSAVWLG 1134
+Q I ++A+ D+ GHGTH AG AAG + T + + E+CE+ LSC+G C+ D+ T W A + + CD+ + C GD + E + G+A GA+LA FDI + I MW+ AG+++ SNSW + + S DV D++++ + D L++F AGN+G D G G+ PA AK + VGAS SGP R ++ ++ D + D +++ +S+ GP D +KP++VAPG M++SA S +G TC L GTSMS P +AGAAALVRQYF A ++E G CD G CE F PS VKA+L+NSA +G
Sbjct: 556 EQYPWISAAEFAED-DAGGHGTHTAGSAAGAVVSSPSYSQTGDFT-EVCEE-GRELSCVGGCIDVDDPFGEDDLITTWDYQYFWAGYEAIDLDRLCPRLDCDDLPEEY--CLGDDEAETLQQHGGVARGAQLAIFDIINDYTGVGIDMAGNGMWEPAMEAGSKLSSNSWGIYAYCDYLSLDVLFDDFMYRNQDQLLLFAAGNDGDDWSGCTMGT---PALAKNVLAVGASTSGPGRLSFTDEDGDPTDGDSRVQDIDAMAY----FSSFGPTLDNRIKPEVVAPGDMIYSAAGS--GDGNYTCRLWQYAGTSMSTPIVAGAAALVRQYFKNETFYAHDVEERGFCDSFG-------CEPFAPSAATVKAMLINSANLMG 913
BLAST of mRNA_H-elongata_contig49036.12080.1 vs. uniprot
Match: A0A6H5JBB4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB4_9PHAE) HSP 1 Score: 171 bits (433), Expect = 2.400e-43 Identity = 137/377 (36.34%), Postives = 182/377 (48.28%), Query Frame = 1
Query: 43 QRKVIQYVDYADGWD------SSGHGTHVAGIAAGKITEDWETKWTDELSPEICED-------VNMTLSCLGVCVG----DMAATSCHWNPELACPISNCDEDISCDEYTDYIFPCFGDP-DEEIPAASGMAPGAKLAFFDIGTSDGSLTIPDDVAEMWDAQYAAGARVMSNSWSLVTMTEPSSRD---VELDEWIHDHPDALVVFGAGNNGYDNGGFNPGSVQSPATAKTAMTVGASNSGPERAYAYYTTASSNFDGVLWPYDDVSFEVSPYSARGPVGDFTMKPDLVAPGLMVHSAKASLTEEGQETCALDSLGGTSMSAPAIAGAAALVRQYFSGGVLADYLDEEG-LCDEGGAYEKAGLCEAFEPSGYLVKAV 1107
QRKV+QY++ G D GHG+HVAG AG I W P C D +SC+GVC+ + + ++ + CP + CD Y + C D E + A G+APGAKLA D+G+SD MW+ GAR+ S SW + EP + D V D+W +++P+ L+VF AGN G D G S+ SPA +K + VG+S SG R L P D EVS +S+ GP D +KPD++APG + SA + G +C LD GTSMS P AGAAALVRQY G A+ + G LC G + A C+AF PSG LVK +
Sbjct: 528 QRKVVQYIESTRGDDVYSEDDPDGHGSHVAGSVAGSIYSGWT-------GPANCPDGVGDATEEQTAMSCVGVCLDPEVLEEYISDNTFDLDALCP------EYDCDVYWEAA--CLSDDRSETLEDAKGVAPGAKLAVLDLGSSDSLEQALGGT--MWEVSAGTGARIHSASWGFID--EPCTVDDSSVSFDQWAYENPEHLLVFAAGNLGDDMTGC---SIASPAVSKNCLAVGSSMSGELR---------------LSPGD--MDEVSDFSSMGPTTDDRIKPDILAPGHYIFSA----SNGGDGSCQLDRNSGTSMSCPIAAGAAALVRQYLVDGFYAEDVGARGSLCAAG--TDPAWACDAFSPSGALVKVM 859
BLAST of mRNA_H-elongata_contig49036.12080.1 vs. uniprot
Match: D8LBZ2_ECTSI (Subtilisin (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ2_ECTSI) HSP 1 Score: 163 bits (413), Expect = 2.450e-41 Identity = 127/368 (34.51%), Postives = 184/368 (50.00%), Query Frame = 1
Query: 40 DQRKVIQYVDYADGWDSSGHGTHVAGIAAGKITEDWETKWTDELSPEICEDVNMTLSCLGVCV-------GDMAATSCH----WNPELACPISNCDEDISCDEYTDYIFPCFGDPDEE-IPAASGMAPGAKLAFFDIGTSDGSLTIPDDVAEMWDAQYAAGARVMSNSWSLVTMTEPSSRDVELDEWIHDHPDALVVFGAGNNGYDNGGFNPGSVQSPATAKTAMTVGASNSGPER-AYAYYTTASSNFDGVLWPYDDVSFEVSPYSARGPVGDFTMKPDLVAPGLMVHSAKASLTEEGQETCALDSLGGTSMSAPAIAGAAALVRQYFSGGVLADY-LDEEGLCDEGGAYEKAGLCEAFEPSGYLVK 1101
DQ I ++A+ + + GHGTH AG AAG + T + + E+CE+ LSC+G C+ GD T+ W A + + CD+ + C GD + E + G+A GA+LA FDI + I MW+ AG+++ SNSW + E S DV D++++ + D L++F AGN+G + G GS PA AK + VGAS SGP R ++ ++ D + D +++ +S+ GP D +KP++VAPG M++SA +G TC L GTSMS P +AGAAALVRQYF + ++E G CD G CE F PS VK
Sbjct: 273 DQYPWISAPEFAENY-AGGHGTHTAGSAAGAVVSSPSYSQTGDFT-EVCEE-GRELSCVGGCIDVDDTFGGDDLITTWDYQYFWAGYEAIDLDRLCPRLDCDDRPEEY--CLGDDEAETLQQHGGVARGAQLAIFDILDDYTGIGIEMAGNGMWEPAMEAGSKLSSNSWGIYAYCEYLSYDVLYDDFMYRNQDQLLLFAAGNDGEEWSGCTMGS---PAVAKNVLAVGASTSGPGRLSFTDEDGDPTDGDSRVQDIDAMAY----FSSFGPTLDGRIKPEVVAPGDMIYSAAGG--GDGNYTCRLWQYAGTSMSTPVVAGAAALVRQYFKNETFYTHDVEERGFCDSFG-------CEPFAPSAATVK 619
BLAST of mRNA_H-elongata_contig49036.12080.1 vs. uniprot
Match: A0A836CH33_9STRA (Subtilisin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH33_9STRA) HSP 1 Score: 166 bits (419), Expect = 2.670e-41 Identity = 146/427 (34.19%), Postives = 200/427 (46.84%), Query Frame = 1
Query: 16 SEEAAVYPDQRKVIQYV--DYADGWDS-SGHGTHVAGIAAGKITEDWETKWTDELS-----------------------------------PEICEDVNMTLSCLGVCVGDM------AATSC-------HWNPELACPISNCDEDISCDEYTDYIFPCFGDPDEEIPAASGMAPGAKLAFFDIGTSDGSLTIPDDVAEMWDAQYAAGARVMSNSWSLVTMTEPSSRDVELDEWIHDHPDALVVFGAGNNGYDNGGFNPGSVQSPATAKTAMTVGASNSGPERAYAYYTTASSNFDGVLWPYDDVSFEVSPYSARGPVGDFTMKPDLVAPGLMVHSAKA------SLTEEGQETCALDSLGGTSMSAPAIAGAAALVRQYFSGGVLA-DYLDEEGLCDEGGAYEKAGLCEAFEPSGYLVKAVLVNSA 1122
++ V+ D+RKVIQY+ ADG D GHGTHVA G + +T E P +C L+C G C+ D +T C +++ L C CD D S T PC D E +PAASG APGA+LAF DIG G L V ++ DA AAGA+V S+SW T + ++ DV +D ++++ P+AL ++ AGN+G + PG+V SPA +K A+ VG+S +G A++ + VS +S+RGP D +KPDLVAPG V SA A + TCAL L GTSM+ P +AG+A L+R+Y GG A D L Y +A F PSG L+KA+LV +A
Sbjct: 525 NDTGVVHLDRRKVIQYLVAPSADGTDYYRGHGTHVARSPLGAMHH--TNNFTHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAPATPLPPVCA-AGALLTCTGECMTDADCAALGLSTPCTANVGDEYFDNMLNCARFGCDGDFSL-YTTPQRPPCGVDAAEALPAASGAAPGARLAFIDIGDDFGELLDTMSVRDILDAALAAGAKVSSHSWGS-TSSAYTTLDVAVDTFLYERPEALALWAAGNDGL----YGPGTVTSPALSKNALAVGSSGNG-----AFHLGPGAA-------------RVSDFSSRGPTYDARVKPDLVAPGEKVLSAAARGAGLLGAAPPREPTCALMYLSGTSMATPLLAGSALLLREYLEGGAYAADCARLGALSAAASPYARA----PFAPSGALLKALLVAAA 920
BLAST of mRNA_H-elongata_contig49036.12080.1 vs. uniprot
Match: A0A7S2SR84_9STRA (Subtilisin (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR84_9STRA) HSP 1 Score: 151 bits (381), Expect = 4.320e-39 Identity = 121/329 (36.78%), Postives = 170/329 (51.67%), Query Frame = 1
Query: 85 DSSGHGTHVAGIAAGKITEDWETKWTDELSPEI---------CE--DVNMTLSCLG---VCVGDMAAT---SCHWNPELACPISNCDEDISCDEYTDYIFPCFGDPDEEIPAAS-GMAPGAKLAFFDIGT--SDGSLTIPDDVAEMWDAQYAAGARVMSNSWSLVTMTEPSSRDVELDEWIHDHPDALVVFGAGNNGYDNGGFNPGSVQSPATAKTAMTVGASNSGPERAYAYYTTASSNFDGVLWPYDDVSFEVSPYSARGPVGDFTMKPDLVAPGLMVHSAKASLTEEGQETCALDSLGGTSMSAPAIAGAAALVRQYFSGGVLADY 1011
++ GHGTHV G AAG+I + W +D+ E CE D + SCL VC + + SC W SC Y +E+ A S G+AP AKLAFFDIG SD T ++ + Y AGAR+ SNSW T + SS D+++D + ++PD L++F AGN+G D G++ +V SP+ AK ++ VGAS +G ++T + N D Y +S+ GP D +KPD+VAPG V SA A++ + TC + GTSM+ PA+AGAAALVRQYF+ G+ AD+
Sbjct: 4 ETQGHGTHVGGTAAGRI-QGWNLGGSDDDGEECPNADSQISACEVPDYYTSSSCLASNDVCSTSFSGSFFGSCAW---------------SCYCTLGYFLGTNQQTCDELRADSNGVAPDAKLAFFDIGEDGSDSLYTPASLSSQYFPVAYTAGARIHSNSWGTSTYSYESS-DLQIDSFCENYPDMLILFAAGNDGDD--GYS--TVGSPSQAKNSVVVGASQTG-----RWWTYPNGNSDPGYVAY---------FSSAGPTEDGRIKPDVVAPGFYVVSA-AAVGYSSEPTCGVFDNQGTSMACPAVAGAAALVRQYFTDGLYADH 296
BLAST of mRNA_H-elongata_contig49036.12080.1 vs. uniprot
Match: D8LNG4_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG4_ECTSI) HSP 1 Score: 156 bits (395), Expect = 2.000e-38 Identity = 138/409 (33.74%), Postives = 191/409 (46.70%), Query Frame = 1
Query: 31 VYPDQRKVIQYV-----------------------------DYADGWDSSGHGTHVAGIAAGKITEDWETKWTDELSPEI--CEDVNMTLSCLGVCVGDMAATSCHWNPELACP-ISNCDEDISCDEYTDY------IFPCFGDP-DEEIPAASGMAPGAKLAFFDIGTSDGSLTIPDDVAEMWDAQYAAGARVMSNSWSLVTMTEPSSRDVELDEWIHDHPDALVVFGAGNNGYDNGGFNPGSVQSPATAKTAMTVGASNSGPERAYAYYTTASSNFDGVLWPYDDVSFEVSPYSARGPVGDFTMKPDLVAPGLMVHSAKASLTEEGQETCALDSLGGTSMSAPAIAGAAALVRQYFSGGVL-ADYLDEEGLCDEGGAYEKAGLCEAFEPSGYLVKAVLVNSAVWLGD 1137
+YPD+RK+IQY+ D+ + D +GHGTHVAG AG T E+ C D T+SC+G CV D A +LA P + D D C ++DY C D E + GMA GAKLA FD L+ P +W+ A ++ SNS+ S DV DEW+ +P+ L++F AGN+G + ++ SPA AK + VGAS SG R A T S D V + +S+ GP D +KP+++APG ++SA AS +C L + GTSMS P +AGA+A++RQYF A + G CDE AG CEAF PS +KA+++NSA +G+
Sbjct: 138 IYPDRRKIIQYINLIKSDDTEGSHGDSFTTSLGQQYPWLSADHFEYDDEAGHGTHVAGSVAGA---------TLNTPAELISCNDTE-TMSCVGACVDDDEANDVD---DLATPYVEIADLDRLCPLFSDYDCDGLETDKCLSDDVAETLTNNGGMAQGAKLAIFDAFYDTFGLS-PFVGTGLWEPCADADCKIHSNSYGGDFECSLGSNDVLYDEWMVSNPENLLIFAAGNDGELR--RSTCTIGSPAIAKNVLAVGASTSGDTRLSA---TPGSGIDTV-----------AVFSSYGPTSDSRIKPEVLAPGDAIYSA-ASDGSVDTHSCRLWAYVGTSMSTPIVAGASAMIRQYFMNETFFATDMTARGFCDEW-----AG-CEAFSPSSATLKALMINSANLMGE 509
BLAST of mRNA_H-elongata_contig49036.12080.1 vs. uniprot
Match: D8LK25_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK25_ECTSI) HSP 1 Score: 152 bits (383), Expect = 1.320e-36 Identity = 114/281 (40.57%), Postives = 148/281 (52.67%), Query Frame = 1
Query: 307 CDEYTDYIFPCFGDP-DEEIPAASGMAPGAKLAFFDIGTSDGSLTIPDDVAEMWDAQYAAGARVMSNSWSLVTMTEPSSRD---VELDEWIHDHPDALVVFGAGNNGYDNGGFNPGSVQSPATAKTAMTVGASNSGPERAYAYYTTASSNFDGVLWPYDDVSFEVSPYSARGPVGDFTMKPDLVAPGLMVHSAKASLTEEGQETCALDSLGGTSMSAPAIAGAAALVRQYFSGGVLADYLDEEG-LCDEGGAYEKAGLCEAFEPSGYLVKAVLVNSAVWLG 1134
CD Y + C D E + A G+APGAKLA D+G+SD MW+ GAR+ S SW + EP + D V DEW +++P+ L+VF AGN G D G S+ SPA +K + VG+S SG R L P D EVS +S+ GP D +KPD++APG + SA + G+ +C LD GTSMS P AGAAALVRQY G AD + G LC A + A C+AF PSG LVKA+L++ A +G
Sbjct: 531 CDVYWETA--CLSDDRSETLEDAKGVAPGAKLAVLDLGSSDSLEQALGGT--MWEVSAGTGARIHSASWGFID--EPCTVDDSAVSFDEWAYENPEHLLVFAAGNLGDDMEGC---SIASPALSKNCLAVGSSMSGELR---------------LSPGD--LDEVSDFSSLGPTTDDRIKPDILAPGHYIFSA----SNGGEGSCQLDRNSGTSMSCPIAAGAAALVRQYLVDGFYADDVAARGSLC--AAATDPAWACDAFSPSGALVKALLIHGADAMG 779 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49036.12080.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig49036.12080.1 >prot_H-elongata_contig49036.12080.1 ID=prot_H-elongata_contig49036.12080.1|Name=mRNA_H-elongata_contig49036.12080.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=385bp IVRTTSEEAAVYPDQRKVIQYVDYADGWDSSGHGTHVAGIAAGKITEDWEback to top mRNA from alignment at H-elongata_contig49036:1045..3789+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig49036.12080.1 ID=mRNA_H-elongata_contig49036.12080.1|Name=mRNA_H-elongata_contig49036.12080.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2745bp|location=Sequence derived from alignment at H-elongata_contig49036:1045..3789+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig49036:1045..3789+ >mRNA_H-elongata_contig49036.12080.1 ID=mRNA_H-elongata_contig49036.12080.1|Name=mRNA_H-elongata_contig49036.12080.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2310bp|location=Sequence derived from alignment at H-elongata_contig49036:1045..3789+ (Himanthalia elongata Himel1 dioecious)back to top |