mRNA_H-elongata_contig48908.12063.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig48908.12063.1 vs. uniprot
Match: A0A6H5KY88_9PHAE (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KY88_9PHAE) HSP 1 Score: 304 bits (779), Expect = 4.040e-93 Identity = 162/223 (72.65%), Postives = 185/223 (82.96%), Query Frame = 1
Query: 4 VKPFDSAEAREILTRQLKQPLSEIFQDADTAFELPIAAASLGQVYRAMLVTGEIVAVKVQRPDVLESVTLDLYVIRILLLFLSNNKSTRESALSLLGVIDNWANRFLQELDYLQEAANGDRFRADMAASTTLGEAIVVPRVFASLTSRYVLVTEWVEGVKV-------------------DAIASTTDEGKERLKKIIATLLNSYLAQLLESGFLHADPHPAS 615
V PFDS +AR IL +QL +PL EIF DADTAFE+P+AAASLGQVY+A LVTGE+VAVKVQRPDVLESVTLDLYVIR+LLLF++ N STRESALS+LGVIDNWA+RFLQELDY+QEAANGDRFR +MA S TLGEAI+VP+V+ SL +RY+LVTEWVEGVKV DAI S+T G+ERLKKI+ATLLNSYLAQLLESGFLHADPHP +
Sbjct: 411 VNPFDSGDARRILEQQLGKPLREIFLDADTAFEIPVAAASLGQVYKATLVTGEVVAVKVQRPDVLESVTLDLYVIRLLLLFIAKNDSTRESALSILGVIDNWADRFLQELDYIQEAANGDRFRREMAESKTLGEAILVPQVYTSLNTRYILVTEWVEGVKVGRPRPAGRVRQMCASDRFVDAIDSSTPAGRERLKKIVATLLNSYLAQLLESGFLHADPHPGN 633
BLAST of mRNA_H-elongata_contig48908.12063.1 vs. uniprot
Match: A0A835Z5E1_9STRA (Protein kinase:ABC1 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5E1_9STRA) HSP 1 Score: 221 bits (562), Expect = 1.450e-63 Identity = 125/206 (60.68%), Postives = 150/206 (72.82%), Query Frame = 1
Query: 1 QVKPFDSAEAREILTRQLKQPLSEIFQDADTAFELPIAAASLGQVYRAMLVT-GEIVAVKVQRPDVLESVTLDLYVIRILLLFLSNNKSTRESALSLLGVIDNWANRFLQELDYLQEAANGDRFRADMAASTTLGEAIVVPRVFASLTSRYVLVTEWVEGVKVDAIASTTDEGKERLKKIIATLLNSYLAQLLESGFLHADPHPAS 615
QV PF SAEA I+ QL E ++ AF+ P+AAASLGQVY+A L G VAVKVQRP VLE+VTLDLYV RI+L L+ S +S+L+ L VIDNW RFL ELDY QEA NGDRFRA+M S LGEAI+VPRVF T+RY+L++EWVEG +V AI G+ERL+KI+ATLLN+YL QLL+SGFLHADPHP +
Sbjct: 175 QVPPFPSAEAVRIIEAQLGGARIEDVFESRAAFDRPVAAASLGQVYQAKLKQDGTTVAVKVQRPKVLEAVTLDLYVTRIILKALALVPSIGDSSLAFLAVIDNWGVRFLDELDYEQEARNGDRFRAEMGKSAELGEAILVPRVFQQFTTRYLLISEWVEGQRVSAIDVDAPGGRERLQKIVATLLNAYLTQLLDSGFLHADPHPGN 380
BLAST of mRNA_H-elongata_contig48908.12063.1 vs. uniprot
Match: A0A836C852_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C852_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.270e-56 Identity = 116/210 (55.24%), Postives = 148/210 (70.48%), Query Frame = 1
Query: 4 VKPFDSAEAREILTRQLKQPLSEIFQDADTAFELPIAAASLGQVYRAML-VTGEIVAVKVQRPDVLESVTLDLYVIRILLLFLSNNKSTR-----ESALSLLGVIDNWANRFLQELDYLQEAANGDRFRADMAASTTLGEAIVVPRVFASLTSRYVLVTEWVEGVKVDAIASTTDEGKERLKKIIATLLNSYLAQLLESGFLHADPHPAS 615
V+PF + EAR L L + L ++F+DA + F P+AAASLGQVY+A L TG+ VAVKVQRP+VL +VT DLYV+RI+L L+ ++A + ID+WA RF+ ELDYL EAAN DRFR +MA S LG+AI+VPRV+ S+T+RY+L TEWV G K+ I +T EG+ L + ATLLNSYL QLLESGFLHADPHP +
Sbjct: 269 VEPFGAKEARATLEASLGRKLEDVFEDA-SVFAKPVAAASLGQVYKARLRATGDEVAVKVQRPEVLFTVTRDLYVMRIILNLLAKCGKIGPVRLGDTAKAFRSCIDSWAVRFMDELDYLTEAANADRFRLEMAKSEALGQAIIVPRVYHSMTTRYMLTTEWVTGEKLSKIDATKPEGRAMLAALQATLLNSYLTQLLESGFLHADPHPGN 477
BLAST of mRNA_H-elongata_contig48908.12063.1 vs. uniprot
Match: A0A7S4D969_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D969_HETAK) HSP 1 Score: 200 bits (508), Expect = 2.750e-56 Identity = 116/207 (56.04%), Postives = 145/207 (70.05%), Query Frame = 1
Query: 1 QVKPFDSAEAREILTRQLKQPLSEIFQDADTAFELPIAAASLGQVYRAMLVTGEIVAVKVQRPDVLESVTLDLYVIRILLLFLSNNK--STRESALSLLGVIDNWANRFLQELDYLQEAANGDRFRADMAASTTLGEAIVVPRVFASLTSRYVLVTEWVEGVKVDAIASTTDEGKERLKKIIATLLNSYLAQLLESGFLHADPHPAS 615
QV PF S EAR IL QL + +E+F D AFE P+AAASLGQVY+A L G VAVKVQRPD+L SVTLDLYVIR LLL ++ + RE+ SL VID WA RFL+ELDY +EAAN F A MA + + + PRVF LT+R+VLV+EWVEG ++ +I TT+ GK+++ ++ LLNSYL QLLE+G LHADPHP +
Sbjct: 321 QVPPFSSEEARAILREQLGRDPAEVFADM-RAFEAPLAAASLGQVYKAALKDGTPVAVKVQRPDMLPSVTLDLYVIRSLLLAGASGPVVAARETCRSLCAVIDAWAVRFLEELDYEREAANAKDFAARMAKCPAVRDVTLTPRVFDELTTRFVLVSEWVEGERLSSIDVTTERGKKQVLTVVNILLNSYLTQLLETGLLHADPHPGN 526
BLAST of mRNA_H-elongata_contig48908.12063.1 vs. uniprot
Match: D7FSM3_ECTSI (ABC1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSM3_ECTSI) HSP 1 Score: 197 bits (501), Expect = 6.650e-55 Identity = 109/205 (53.17%), Postives = 145/205 (70.73%), Query Frame = 1
Query: 4 VKPFDSAEAREILTRQLKQPLSEIFQDADTAFELPIAAASLGQVYRAMLV-TGEIVAVKVQRPDVLESVTLDLYVIRILLLFLSNNKSTRESALSLLGVIDNWANRFLQELDYLQEAANGDRFRADMAASTTLGEAIVVPRVFASLTSRYVLVTEWVEGVKVDAIASTTDEGKERLKKIIATLLNSYLAQLLESGFLHADPHPAS 615
V F S EAR+IL R+L P+ + F+ ++ F+ PIAAASLGQVY+A L TGE VAVK+QRP VL +VT DLYVIRI+L + R+++ S+ +ID+WA RFL+E+DY EA N DRF +MA +LG AI VP V+ +T+RYVLVT+WV+G K + + + EG+ L + ATLLNSYL QLL++GFLHADPHP +
Sbjct: 251 VPEFSSPEARKILERELGVPVGKAFESVES-FDRPIAAASLGQVYKARLKGTGETVAVKIQRPKVLATVTRDLYVIRIILDLIGTVSILRDASRSVKSLIDSWAVRFLEEMDYTMEANNADRFAKEMAKHKSLGSAIKVPSVYRDMTTRYVLVTQWVDGEKASNLEARSPEGRACLATLQATLLNSYLVQLLDNGFLHADPHPGN 454
BLAST of mRNA_H-elongata_contig48908.12063.1 vs. uniprot
Match: A0A6H5JR53_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR53_9PHAE) HSP 1 Score: 191 bits (486), Expect = 2.180e-53 Identity = 110/214 (51.40%), Postives = 146/214 (68.22%), Query Frame = 1
Query: 4 VKPFDSAEAREILTRQLKQPLSEIFQDADTAFELPIAAASLGQVYRAMLV-TGEIVAVKVQRPDVLESVTLDLYVIRILLLFLS---------NNKSTRESALSLLGVIDNWANRFLQELDYLQEAANGDRFRADMAASTTLGEAIVVPRVFASLTSRYVLVTEWVEGVKVDAIASTTDEGKERLKKIIATLLNSYLAQLLESGFLHADPHPAS 615
V F SAEAR+IL R+L P+ + F+ ++ F+ PIAAASLGQVY+A L TGE VAVK+QRP VL +VT DLYVIRI+L + R+++ S+ +ID+WA RFL+E+DY EA N DRF +MA +LG AI VP V+ +T+RYVLVT+WV+G K + + + EG+ L + ATLLNSYL QLL++GFLHADPHP +
Sbjct: 248 VPEFSSAEARKILERELGVPVGKAFESVES-FDRPIAAASLGQVYKARLKGTGETVAVKIQRPKVLATVTQDLYVIRIILDLIGYLLQPTVDVTVSILRDASRSVKSLIDSWAVRFLEEMDYTMEADNADRFAKEMAKHKSLGSAIKVPSVYREMTTRYVLVTQWVDGEKASNLEARSPEGRACLATLQATLLNSYLVQLLDNGFLHADPHPGN 460
BLAST of mRNA_H-elongata_contig48908.12063.1 vs. uniprot
Match: A0A7R9TFX6_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TFX6_9VIRI) HSP 1 Score: 191 bits (485), Expect = 3.850e-53 Identity = 118/210 (56.19%), Postives = 143/210 (68.10%), Query Frame = 1
Query: 4 VKPFDSAEAREILTRQLKQPLSEIFQDADTAFELPIAAASLGQVYRAMLVTG-EIVAVKVQRPDVLESVTLDLYVIRILL-----LFLSNNKSTRESALSLLGVIDNWANRFLQELDYLQEAANGDRFRADMAASTTLGEAIVVPRVFASLTSRYVLVTEWVEGVKVDAIASTTDEGKERLKKIIATLLNSYLAQLLESGFLHADPHPAS 615
V+PF S EAR IL +L PLS F DAD AF P+AAASLGQVYRA L G E VAVKVQRPDVLE+V LDL VIR LL L + TRES + +G+I+ A RFL+ELDY QEA NG RF M AS +G A+VVP+V+ +LTSRYV V +W++GVK+ AI TD + R +++ LL YL QLLE+G LHADPHP +
Sbjct: 198 VQPFASDEARAILEDELGGPLSRTFADADAAFAEPVAAASLGQVYRARLADGGEEVAVKVQRPDVLENVALDLTVIRYLLEAGARLPGDALQQTRESCEATIGLIETVAGRFLEELDYKQEARNGARFGELMGASDDVGAAVVVPKVYENLTSRYVHVAQWIDGVKISAI---TDASERR--ELVRALLGFYLVQLLETGLLHADPHPGN 402
BLAST of mRNA_H-elongata_contig48908.12063.1 vs. uniprot
Match: W7U1Q9_9STRA (Unusual protein kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1Q9_9STRA) HSP 1 Score: 189 bits (479), Expect = 7.860e-52 Identity = 100/204 (49.02%), Postives = 142/204 (69.61%), Query Frame = 1
Query: 1 QVKPFDSAEAREILTRQLKQ--PLSEIFQDADTAFELPIAAASLGQVYRAMLVTGEIVAVKVQRPDVLESVTLDLYVIRILLLFLSNNKSTRESALSLLGVIDNWANRFLQELDYLQEAANGDRFRADMAASTTLGEAIVVPRVFASLTSRYVLVTEWVEGVKVDAIASTTDEGKERLKKIIATLLNSYLAQLLESGFLHADPH 606
QV+PF S EA++I+ L + L +++++ DT F P+AAASLGQVYRA LV G++VAVKVQRP++LE++TLDLY IR+L + S S + V++NW RF QE+DY+QE N +F M A + +A+VVP V+ +++SR VLVTEW+EG K+ + + KE+L+KI+A +LNSYL QLL++G LHADPH
Sbjct: 411 QVRPFSSREAKKIIAANLPKGTALKDVYKNPDTDFYEPVAAASLGQVYRAELVDGKVVAVKVQRPNMLETITLDLYTIRLLCNVGKTIPRFQASCTSFIEVLNNWGGRFQQEIDYVQEKKNTRKFAKAMGAFPLVKDAVVVPEVYETISSRDVLVTEWIEGRKIQSFDKSDPNDKEKLEKILAVMLNSYLVQLLDTGILHADPH 614
BLAST of mRNA_H-elongata_contig48908.12063.1 vs. uniprot
Match: A0A7S2V6P2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6P2_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.610e-48 Identity = 108/207 (52.17%), Postives = 136/207 (65.70%), Query Frame = 1
Query: 1 QVKPFDSAEAREILTRQLKQPLSEIFQDADTAFELPIAAASLGQVYRA-MLVTGEIVAVKVQRPDVLESVTLDLYVIRILLLFLSNNKSTRESALSLLGVIDNWANRFLQELDYLQEAANGDRFRADMA-ASTTLGEAIVVPRVFASLTSRYVLVTEWVEGVKVDAIASTTDEGKERLKKIIATLLNSYLAQLLESGFLHADPHPAS 615
QV F + E + L ++L +++F D + PIAAASLGQVYRA +L TG+ VAVKVQRP +L+SV+LDL VIR LL F + +E+ SL+GVID WA RFL ELDY QEA N F MA T+ A P VF LTSRYV+ +EWVEG ++ +I + T EGKE + +I LLNSYL QLLE+G LHADPHP +
Sbjct: 323 QVPAFGADEVKASLKKELGVDPADVFVDPSVFEKEPIAAASLGQVYRATLLATGQDVAVKVQRPGMLQSVSLDLLVIRKLLNFGARVPQVKETCESLVGVIDAWAARFLDELDYEQEAKNAADFAKRMADTQPTVRYATTTPEVFLDLTSRYVMTSEWVEGQRLSSIDTDTPEGKEAVLTVINILLNSYLTQLLETGLLHADPHPGN 529
BLAST of mRNA_H-elongata_contig48908.12063.1 vs. uniprot
Match: A0A7S1JC13_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JC13_9EUGL) HSP 1 Score: 170 bits (430), Expect = 1.610e-45 Identity = 97/207 (46.86%), Postives = 135/207 (65.22%), Query Frame = 1
Query: 4 VKPFDSAEAREILTRQLKQP--LSEIFQDADTAFELPIAAASLGQVYRAMLVTGEIVAVKVQRPDVLESVTLDLYVIRILLLFLSN----NKSTRESALSLLGVIDNWANRFLQELDYLQEAANGDRFRADMAASTTLGEAIVVPRVFASLTSRYVLVTEWVEGVKVDAIASTTDEGKERLKKIIATLLNSYLAQLLESGFLHADPH 606
V PFD A +I+TR L+++F+ +A P+AAAS+GQVY+ L G VA+KVQRP +L V+LDLY++R LL + NK +S +S +GVID WANRF+QELDY QEA N RF M+ ++ L + VP+V+ TS+ L+TEWVEGV++ +A + EG+ K I+ LL++YL QLLE+GF+HADPH
Sbjct: 438 VPPFDDQLAADIVTRSFPPGTNLAKLFKYGRSAITKPVAAASIGQVYKVELAEGGTVALKVQRPGLLRQVSLDLYIVRQLLDLAAKAGKGNKQFSDSCISTIGVIDEWANRFIQELDYRQEALNQQRFDESMSRNSFLQNTLCVPKVYEEYTSQSTLMTEWVEGVRLSDVAYGSPEGR----KTISQLLSAYLVQLLETGFMHADPH 640 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48908.12063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig48908.12063.1 >prot_H-elongata_contig48908.12063.1 ID=prot_H-elongata_contig48908.12063.1|Name=mRNA_H-elongata_contig48908.12063.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp QVKPFDSAEAREILTRQLKQPLSEIFQDADTAFELPIAAASLGQVYRAMLback to top mRNA from alignment at H-elongata_contig48908:1620..4091- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig48908.12063.1 ID=mRNA_H-elongata_contig48908.12063.1|Name=mRNA_H-elongata_contig48908.12063.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2472bp|location=Sequence derived from alignment at H-elongata_contig48908:1620..4091- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig48908:1620..4091- >mRNA_H-elongata_contig48908.12063.1 ID=mRNA_H-elongata_contig48908.12063.1|Name=mRNA_H-elongata_contig48908.12063.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1230bp|location=Sequence derived from alignment at H-elongata_contig48908:1620..4091- (Himanthalia elongata Himel1 dioecious)back to top |