mRNA_H-elongata_contig48740.12040.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig48740.12040.1 vs. uniprot
Match: D7FPV2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV2_ECTSI) HSP 1 Score: 365 bits (937), Expect = 1.500e-119 Identity = 174/222 (78.38%), Postives = 198/222 (89.19%), Query Frame = 1
Query: 1 LQVDHQGRPREGLISVGSTQGQEPDPLDPDIIQRLDNRFRYRDIPEDYYADEGDNGPHFKRILEWYVDYAGKGVGGMSFLFPVGALRALRRLMTFSNNRGVVISGDKGNNNPEQFRGLVDPHIAVHGSFSVMVNYHAIGAYFTSRGGFALHNPQEEASLKVSTFVLTGETGQALQGDFKGDAIDRKDCERSQRFPHLRAAFRTNVQQFGPNDFFVLQRSIRE 666
QVD QG+ +EGLISVGSTQ EPDPLDP+IIQRLDNRF Y+DIP+DYY DE + PHFKRIL+WYVDYA +G GGMS LFPVGALRALRRLMTFS+NR VISGDKGNNNPEQF+GL+DPHIAVHGSFSVMVNYH+IGAYFTSRGGFALHNPQEEASLKVSTFVLTG++G G++ G+A+DRKD ERS +FPHL AAFRTNV+QFGPNDFFV+Q+ ++E
Sbjct: 290 FQVD-QGKAKEGLISVGSTQKDEPDPLDPEIIQRLDNRFSYQDIPDDYYTDEDGDEPHFKRILDWYVDYAAQGSGGMSILFPVGALRALRRLMTFSDNRAFVISGDKGNNNPEQFKGLMDPHIAVHGSFSVMVNYHSIGAYFTSRGGFALHNPQEEASLKVSTFVLTGDSGDDEDGEWTGEAMDRKDSERSSQFPHLEAAFRTNVEQFGPNDFFVMQKCMKE 510
BLAST of mRNA_H-elongata_contig48740.12040.1 vs. uniprot
Match: A0A7S2D5C4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D5C4_9STRA) HSP 1 Score: 293 bits (751), Expect = 6.570e-93 Identity = 149/229 (65.07%), Postives = 172/229 (75.11%), Query Frame = 1
Query: 1 LQVDHQGRPREGLISVGSTQGQEPDPLDPDIIQRLDNRFRYRDIPEDYYADEGDNGPHFKRILEWYVDYAGKGVGGM-SFLFPVGALRALRRLMTFSNNRGVVISGDKGNNNPEQFRGLVDPHIAVHGSFSVMVNYHAIGAYFTSRGGFALHNPQEEASLKVSTFVLTGET------GQALQGDFKGDAIDRKDCERSQRFPHLRAAFRTNVQQFGPNDFFVLQRSIRE 666
L D G +EGLISVGS + EPDPL+P+II+R DN FRY DI DYY +EG + PH +RIL+WY Y G GG S L P+GA+RA+RRL F+N R VVISGDKGNNNPEQFRGL+DPHIAVHGSFSVMVNYHAIG+YFTSRGGFALHNPQEEASLKVSTFVLTG+ G G + GDAI + R+ PHL AF T+V QFGPNDFFVLQ+S++E
Sbjct: 165 LTPDGGGLLKEGLISVGSKRSDEPDPLEPEIIKRFDNHFRYDDISADYYKNEGGDEPHLERILKWYEQYFGSSSGGGGSILLPIGAIRAIRRLGAFTNGRAVVISGDKGNNNPEQFRGLLDPHIAVHGSFSVMVNYHAIGSYFTSRGGFALHNPQEEASLKVSTFVLTGDDTPCPTPGLDEDGSWLGDAISDRSDARASTCPHLCQAFSTSVDQFGPNDFFVLQKSLKE 393
BLAST of mRNA_H-elongata_contig48740.12040.1 vs. uniprot
Match: A0A7R9YDE7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDE7_9STRA) HSP 1 Score: 277 bits (709), Expect = 2.370e-86 Identity = 139/225 (61.78%), Postives = 167/225 (74.22%), Query Frame = 1
Query: 1 LQVDHQGRPREGLISVGSTQGQEPDPLDPDIIQRLDNRFRYRDIPEDYYADEGDNGPHFKRILEWYVDYAGKG--VGGMSFLFPVGALRALRRLMTFSNNRGVVISGDKGNNNPEQFRGLVDPHIAVHGSFSVMVNYHAIGAYFTSRGGFALHNPQEEASLKVSTFVLTG-ETGQALQGDFKGDAIDRKDCERSQRFPHLRAAFRTNVQQFGPNDFFVLQRSIRE 666
QVD QG +EGLISVGS +E DPLDP+IIQR DN ++Y + DYY EGD+ H +RIL WY DY + GG S L P+GALRALR+L + S R +VISGDKGNNNPE FRGL DPHIAVHGSFSVMVNYHAIG YFTSRGGFALHNPQEEASLKVS FVL G E + G+ ++ +D +R+ R+P+LRAAF ++ FGPNDFFV+Q+S++E
Sbjct: 243 FQVDSQGL-KEGLISVGSKAAEEEDPLDPEIIQRFDNLYKYEPVGTDYYKGEGDDDAHLERILAWYTDYFTQNDESGGASLLVPIGALRALRKLTSMSGGRAIVISGDKGNNNPEHFRGLADPHIAVHGSFSVMVNYHAIGGYFTSRGGFALHNPQEEASLKVSCFVLGGGENDDEDSRPWTGEHLEARDRDRALRWPNLRAAFEQSIVSFGPNDFFVMQKSLKE 466
BLAST of mRNA_H-elongata_contig48740.12040.1 vs. uniprot
Match: A0A6U3RM50_9STRA (Type II protein arginine methyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3RM50_9STRA) HSP 1 Score: 278 bits (710), Expect = 6.560e-86 Identity = 143/226 (63.27%), Postives = 172/226 (76.11%), Query Frame = 1
Query: 16 QGRPREGLISVGSTQGQEPDPLDPDIIQRLDNRFRYRDIPEDYYAD-EGDNGPHFKRILEWYVDYAGKGV--GGMSFLFPVGALRALRRLMTFSNNRGVVISGDKGNNNPEQFRGLVDPHIAVHGSFSVMVNYHAIGAYFTSRGGFALHNPQEEASLKVSTFVLTGET-----GQALQGDFKGD-AIDRKDCERSQRFPHLRAAFRTNVQQFGPNDFFVLQRSIRE 666
+GR EGLISVGST+ +EPDPLDP+IIQRLDNRF YR+I + YY EGD+G H +RIL WY D+ K G S L P+GALRA+RRL S R +V+SGDKG+NNPE F GL+DPHIAVHGSFSVMVNYHA+G YFTSRGGFALHNPQEEASLKVS FVLTG+T L D+ D A++ +D +R+ FP+L AFR +V +FGPNDFFVLQ+S++E
Sbjct: 261 EGRLTEGLISVGSTRAKEPDPLDPEIIQRLDNRFEYREITDRYYMPTEGDDGEHLQRILGWYRDHFQKNHPNDGASILLPIGALRAIRRLTALSAGRCLVLSGDKGHNNPEHFTGLLDPHIAVHGSFSVMVNYHAVGMYFTSRGGFALHNPQEEASLKVSAFVLTGDTTSNDDNNGLVLDWSTDGAVEERDWDRAAAFPNLSIAFRDSVDRFGPNDFFVLQKSLKE 486
BLAST of mRNA_H-elongata_contig48740.12040.1 vs. uniprot
Match: A0A835Z6J8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J8_9STRA) HSP 1 Score: 277 bits (708), Expect = 2.400e-85 Identity = 141/231 (61.04%), Postives = 167/231 (72.29%), Query Frame = 1
Query: 28 REGLISVGSTQGQEPDPLDPDIIQRLDNRFRYRDIPEDYYADEGDNGPH-------------FKRILEWYVDYAGKGVGGMSFLFPVGALRALRRLMTFSNNRGVVISGDKGNNNPEQFRGLVDPHIAVHGSFSVMVNYHAIGAYFTSRGGFALHNPQEEASLKVSTFVLTGETGQAL-----QGDFKGDAIDRKDCERSQRFPHLRAAFRTNVQQFGPNDFFVLQRSIRE 666
+EGLISVGS + E DPLDP+II+R DN+F YRDI EDYY E + F+RIL WYVD+ G S LFP+GALRALRRL++FS NR +VISGDKGNNNP+QFRGL DPHIAVHGSFSVMVNYHAIGAYFT+RGGFALHNPQEEASLKVS FV TG+ A G + G A + KD RS+ FP+L AF+ +V+ FGPNDFFV+Q+ ++E
Sbjct: 276 KEGLISVGSKRPAEADPLDPEIIKRFDNKFCYRDISEDYYKGEEIDAIXXXXXXXXXXXXVTFRRILHWYVDHFSPSPAGASILFPIGALRALRRLLSFSGNRAIVISGDKGNNNPDQFRGLADPHIAVHGSFSVMVNYHAIGAYFTARGGFALHNPQEEASLKVSAFVATGDVHAAGGVTADDGQWTGGAFEAKDEARSRLFPNLAGAFKYHVEHFGPNDFFVMQKGLKE 506
BLAST of mRNA_H-elongata_contig48740.12040.1 vs. uniprot
Match: A0A4D9D744_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D744_9STRA) HSP 1 Score: 256 bits (653), Expect = 6.200e-79 Identity = 141/268 (52.61%), Postives = 164/268 (61.19%), Query Frame = 1
Query: 28 REGLISVGSTQGQEPDPLDPDIIQRLDNRFRYRDIPEDYYA------------------------DEGDNGP-------HFKRILEWYVDYAGKGVGGMSFLFPVGALRALRRLMTFSNNRGVVISGDKGNNNPEQFRGLVDPHIAVHGSFSVMVNYHAIGAYFTSRGGFALHNPQEEASLKVSTFVLTGETG------------------------QALQGDFKGDAIDRKDCERSQRFPHLRAAFRTNVQQFGPNDFFVLQRSIRE 666
+EGLISVGS Q QEPDPLDP+II+R N F+Y+ + DYYA G NG H RIL WY DY G+ G SFLFP+GALRALRRL+ FSN+RG+VISGDKG+N EQFRGLVDPHIAVHGSFSVMVNYHAIG YF SRGGFALHNPQE+ASLKVS FVL+G G + G + + +R + FP LRAAF + V FGPNDFFVLQ+S++E
Sbjct: 104 KEGLISVGSKQAQEPDPLDPEIIKRFHNLFKYQPVTPDYYAHTHQPAXXXXXXXXGSPPSSSEPLSAGTNGSSDREDSLHLGRILHWYRDYFGRSSTGGSFLFPIGALRALRRLLAFSNDRGLVISGDKGSNQAEQFRGLVDPHIAVHGSFSVMVNYHAIGLYFISRGGFALHNPQEDASLKVSAFVLSGRAGPPEIPSEDPPPKAHSPMTATTSCLDTSPSSWAGCGAESEGEKRMRAFPCLRAAFSSAVDHFGPNDFFVLQKSMKE 371
BLAST of mRNA_H-elongata_contig48740.12040.1 vs. uniprot
Match: W7TM08_9STRA (Tetratricopeptide repeat family protein n=5 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM08_9STRA) HSP 1 Score: 259 bits (661), Expect = 1.290e-78 Identity = 147/277 (53.07%), Postives = 169/277 (61.01%), Query Frame = 1
Query: 1 LQVDHQGRPREGLISVGSTQGQEPDPLDPDIIQRLDNRFRYRDIPEDYYA------------------------DEGDNGP-------HFKRILEWYVDYAGKGVGGMSFLFPVGALRALRRLMTFSNNRGVVISGDKGNNNPEQFRGLVDPHIAVHGSFSVMVNYHAIGAYFTSRGGFALHNPQEEASLKVSTFVLTGETG------------------------QALQGDFKGDAIDRKDCERSQRFPHLRAAFRTNVQQFGPNDFFVLQRSIRE 666
QVD G +EGLISVGS Q QEPDPLDP+II+R N F+Y+ + DYYA G NG H RIL WY DY G+ G SFLFP+GALRALRRL+ FSN+RG+VISGDKG+N EQFRGLVDPHIAVHGSFSVMVNYHAIG YF SRGGFALHNPQE+ASLKVS FVL+G G + G + + +R + FP LRAAF T V QFGPNDFFVLQ+S++E
Sbjct: 258 FQVDG-GVLKEGLISVGSKQAQEPDPLDPEIIKRFHNLFQYQPVTPDYYAHTHQPAXXXXXXXXGSPPSSSEPLSAGTNGSSDREDSLHLGRILHWYRDYFGRSSTGGSFLFPIGALRALRRLLAFSNDRGLVISGDKGSNQAEQFRGLVDPHIAVHGSFSVMVNYHAIGLYFISRGGFALHNPQEDASLKVSAFVLSGRAGPPESPSEDSPPEAHSPVTTTTSCLDTSPSSWAGPNAESEGEKRVRAFPCLRAAFSTAVDQFGPNDFFVLQKSMKE 533
BLAST of mRNA_H-elongata_contig48740.12040.1 vs. uniprot
Match: F0YMM3_AURAN (Type II protein arginine methyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMM3_AURAN) HSP 1 Score: 251 bits (642), Expect = 4.510e-77 Identity = 133/250 (53.20%), Postives = 165/250 (66.00%), Query Frame = 1
Query: 1 LQVDHQGRPREGLISVGSTQGQEPDPLDPDIIQRLDNRFRYRDIPEDYYAD-EGDNGPHFKRILEWYVDYAGKGVGGMSFLFPVGALRALRRLMTFSNNRGVVISGDKGNNNPEQFRGLVDPHIAVHGSFSVMVNYHAIGAYFTSRGGFALHNPQEEASLKVSTFVLTGETG-------------------QALQGDFK--------GDAIDRKDCERSQRFPHLRAAFRTNVQQFGPNDFFVLQRSIRE 666
QV++ G +EGLISVGS + E DPLDP+II+R DN+F+YR + EDYY E ++ HFKRIL WY D+ G G S L P+GALRALRRL +F+ R +V+SGDKGNNN EQFRGL+DPH+AVHGSFSVMVNYHAIG Y TSR GF LH+PQEEASLKVS V TGE+ +A F G+ ++R RS FP+L FR ++ FGPNDFFV+Q+S++E
Sbjct: 183 FQVEN-GELKEGLISVGSRKDLEDDPLDPEIIKRFDNQFQYRVVDEDYYTKLEVEDARHFKRILRWYRDFFGNSQSGASILLPIGALRALRRLTSFAGGRALVLSGDKGNNNHEQFRGLMDPHVAVHGSFSVMVNYHAIGLYCTSRSGFVLHDPQEEASLKVSALVFTGESSTCSPLSDSADRTYAKCVETRASSSSFDLCETQAWTGNEVERLSAARSIAFPYLCRTFRDSIISFGPNDFFVMQKSMKE 431
BLAST of mRNA_H-elongata_contig48740.12040.1 vs. uniprot
Match: G4Z4F3_PHYSP (Type II protein arginine methyltransferase n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z4F3_PHYSP) HSP 1 Score: 252 bits (644), Expect = 2.820e-76 Identity = 129/228 (56.58%), Postives = 157/228 (68.86%), Query Frame = 1
Query: 1 LQVDHQGRPREGLISVGSTQGQEPDPLDPDIIQRLDNRFRYRDIPEDYYADEGDNGPHFKRILEWYVDYAGKGVGGMSFLFPVGALRALRRLMTFSNNRGVVISGDKGNNNPEQFRGLVDPHIAVHGSFSVMVNYHAIGAYFTSRGGFALHNPQEEASLKVSTFVLTG------ETGQALQGDFKGDAIDRKDCERSQRFPHLRAAFRTNVQQFGPNDFFVLQRSIRE 666
QVD G +EGL+SVGS + +EPDPLDP+II+RL+N F+Y I E YY G+ PH IL+WY +Y G + L P+GAL A+ RL S N V +SGDKGNNNP+ FRG+ DPHIAVHGSFSVMVNYHAIG YF SRGGFALH+PQEEASLKVS FVL ET + + GD +DR +RS +FPHL AF ++ FGPNDFFV+Q+S +E
Sbjct: 274 FQVDG-GVLKEGLVSVGSKRAEEPDPLDPEIIKRLNNIFKYEQIDETYY---GETRPHCNNILKWYHEYFDPASSGATILVPIGALSAIERLAALSKNGLVALSGDKGNNNPDHFRGVSDPHIAVHGSFSVMVNYHAIGVYFASRGGFALHSPQEEASLKVSAFVLPANAVGEHETVSSAMTELYGDGLDRTCAKRSLQFPHLTTAFEDDIVCFGPNDFFVMQKSTKE 497
BLAST of mRNA_H-elongata_contig48740.12040.1 vs. uniprot
Match: A0A3R7J6B8_9STRA (Type II protein arginine methyltransferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J6B8_9STRA) HSP 1 Score: 250 bits (639), Expect = 6.960e-76 Identity = 128/228 (56.14%), Postives = 156/228 (68.42%), Query Frame = 1
Query: 1 LQVDHQGRPREGLISVGSTQGQEPDPLDPDIIQRLDNRFRYRDIPEDYYADEGDNGPHFKRILEWYVDYAGKGVGGMSFLFPVGALRALRRLMTFSNNRGVVISGDKGNNNPEQFRGLVDPHIAVHGSFSVMVNYHAIGAYFTSRGGFALHNPQEEASLKVSTFVLTGETGQ------ALQGDFKGDAIDRKDCERSQRFPHLRAAFRTNVQQFGPNDFFVLQRSIRE 666
QVD G +EGL+SVGS + +EPDPLDP+II+RL+N F+Y I E YY G++ PH IL+WY +Y G + L P+GAL AL RL SN VV+SGDKGNNNP+ FRG+ DPHIAVHGSFSVMVNYHAIG YF SRGGFALH+PQEEASLKVS FVL + + GD +DR +RS ++PHL AF + FGPNDFFV+Q+S +E
Sbjct: 209 FQVDD-GVLKEGLVSVGSKRVEEPDPLDPEIIKRLNNIFKYEQIDETYY---GESRPHCNNILKWYHEYFDPASSGATILVPIGALTALERLSALSNRGLVVLSGDKGNNNPDHFRGVTDPHIAVHGSFSVMVNYHAIGVYFASRGGFALHSPQEEASLKVSAFVLPANVASESLAASSTMLELYGDGLDRVCEKRSHQYPHLSTAFEDEIASFGPNDFFVMQKSTKE 432 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48740.12040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig48740.12040.1 >prot_H-elongata_contig48740.12040.1 ID=prot_H-elongata_contig48740.12040.1|Name=mRNA_H-elongata_contig48740.12040.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=230bp LQVDHQGRPREGLISVGSTQGQEPDPLDPDIIQRLDNRFRYRDIPEDYYAback to top mRNA from alignment at H-elongata_contig48740:280..3345- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig48740.12040.1 ID=mRNA_H-elongata_contig48740.12040.1|Name=mRNA_H-elongata_contig48740.12040.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3066bp|location=Sequence derived from alignment at H-elongata_contig48740:280..3345- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig48740:280..3345- >mRNA_H-elongata_contig48740.12040.1 ID=mRNA_H-elongata_contig48740.12040.1|Name=mRNA_H-elongata_contig48740.12040.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1380bp|location=Sequence derived from alignment at H-elongata_contig48740:280..3345- (Himanthalia elongata Himel1 dioecious)back to top |