mRNA_H-elongata_contig48651.12026.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig48651.12026.1 vs. uniprot
Match: D7FTI2_ECTSI (Store-operated calcium entry-associated regulatory factor n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTI2_ECTSI) HSP 1 Score: 221 bits (562), Expect = 4.710e-66 Identity = 128/272 (47.06%), Postives = 158/272 (58.09%), Query Frame = 1
Query: 28 SRRTSPIEQLVCISDSGASAGCPRDQRWLFSSALCRNQGTGDDGQPRWECSADLPSDAIFHSVEVSCEGYDSRDDPYVLTGSCSLSYSLDAVGPGFYAGNYGSDGFNLGHLISLVVFGALVYRFLRALGKLSRSRPPAYSEAPSP--------FLTDDDPHTPYIATGEPVLATAVPVEDLENARPTGAQKSSPGV---------------VVAEGVAVGERETATGVLDISSAQGVEVAGVRGAGGAGVGIGGEERSRYPPQRIDDLALPE 774
SRRT PI QL+C G SAGCP+D RW F +ALC+NQGTGDDGQP+WECSADLP+D +V VSCEG+DS DPYVL GSCSL+YSLDAVGP F G S G NLG+++ V+FG+ R LRA GK SR PPAY++ SP T DP ++ TGEPVLATAVPV++L + SP + I A+ V++ AG AG GG +R+PP+RIDD+ALP+
Sbjct: 30 SRRTRPIAQLIC-DGGGGSAGCPKDPRWQFQTALCKNQGTGDDGQPQWECSADLPADGALGAVTVSCEGFDSPSDPYVLVGSCSLTYSLDAVGPWFGGGK--SSGLNLGNVVFFVIFGSFAIRILRAWGKPSRPPPPAYADPASPDGGDSSQPLNTTSDPA--FLVTGEPVLATAVPVDELNHDVENNNASCSPSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGIPMAEAVQME----AGVAGAESGGGATARFPPRRIDDMALPQ 292
BLAST of mRNA_H-elongata_contig48651.12026.1 vs. uniprot
Match: A0A1Y3BFY4_EURMA (Store-operated calcium entry-associated regulatory factor (Fragment) n=1 Tax=Euroglyphus maynei TaxID=6958 RepID=A0A1Y3BFY4_EURMA) HSP 1 Score: 89.4 bits (220), Expect = 6.600e-19 Identity = 46/91 (50.55%), Postives = 58/91 (63.74%), Query Frame = 1
Query: 28 SRRTSPIEQLVCISDSGASAGCPRDQRWLFSSALCRNQGTGDDGQP-RWECSADLPSDAIFHSVEVSCEGYDSRDDPYVLTGSCSLSYSLD 297
SRRTSPI+QL C+ G + R SA C N+G+ DGQ +WEC AD+PS F +E+SCEGYDS DD Y+L GSC L Y++D
Sbjct: 30 SRRTSPIQQLTCV-------GGGQCNRINIQSAQCYNRGS--DGQSIQWECKADMPSRYKFGQLEMSCEGYDSADDEYILAGSCGLRYTID 111
BLAST of mRNA_H-elongata_contig48651.12026.1 vs. uniprot
Match: E4XZG8_OIKDI (Store-operated calcium entry-associated regulatory factor n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4XZG8_OIKDI) HSP 1 Score: 96.3 bits (238), Expect = 8.170e-19 Identity = 58/150 (38.67%), Postives = 81/150 (54.00%), Query Frame = 1
Query: 31 RRTSPIEQLVCISDSGASAGCPRDQRWLFSSALCRNQGTGDDGQP-RWECSADLPSDAIFHSVEVSCEGYDSRDDPYVLTGSCSLSYSLDAVGPGF-YAGNYG---------SDGFNLGHLISLVVFGALVYRFLRALGKLSRSRPPAYS 447
RR++P+ QL CI G SAGC ++ + C N+GT DGQ +WEC AD+ F V+V+CEG++ DDPYVL GSC L Y++D VG Y+ N G +D F G ++ G ++Y + L S RPP Y+
Sbjct: 39 RRSAPVPQLQCI---GGSAGC---SAFVPTVVQCYNRGT--DGQDIQWECKADMEMKYKFGQVQVTCEGFNYPDDPYVLAGSCGLEYTIDRVGSSSSYSSNTGGTSFWSSSNNDVFEEGSWALFIIIGFVIYLLVTNLNSSSDDRPPPYN 180
BLAST of mRNA_H-elongata_contig48651.12026.1 vs. uniprot
Match: E4YKC4_OIKDI (Store-operated calcium entry-associated regulatory factor n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4YKC4_OIKDI) HSP 1 Score: 92.4 bits (228), Expect = 2.250e-18 Identity = 56/150 (37.33%), Postives = 79/150 (52.67%), Query Frame = 1
Query: 31 RRTSPIEQLVCISDSGASAGCPRDQRWLFSSALCRNQGTGDDGQP-RWECSADLPSDAIFHSVEVSCEGYDSRDDPYVLTGSCSLSYSLDAVGPGF-YAGNYGSDGF---------NLGHLISLVVFGALVYRFLRALGKLSRSRPPAYS 447
RR++P+ QL CI G SAGC ++ + C N+GT DGQ +WEC AD+ F V+V+CEG++ DDPYVL GSC L Y++D VG Y+ + G F G ++ G ++Y + L S RPP Y+
Sbjct: 39 RRSAPVPQLQCI---GGSAGC---SAFVPTVVQCYNRGT--DGQDIQWECKADMEMKYKFGQVQVTCEGFNYPDDPYVLAGSCGLEYTIDRVGSSSSYSSDTGGTSFWSSSNTDSSEEGSWALFIIIGFVIYLLVTNLNSSSDDRPPPYN 180
BLAST of mRNA_H-elongata_contig48651.12026.1 vs. uniprot
Match: A0A2B4RVN8_STYPI (Store-operated calcium entry-associated regulatory factor n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RVN8_STYPI) HSP 1 Score: 92.4 bits (228), Expect = 3.200e-18 Identity = 50/115 (43.48%), Postives = 64/115 (55.65%), Query Frame = 1
Query: 13 GVRYGSRRTSPIEQLVCISDSGASAGCPRDQRWLFSSALCRNQGTGDDGQPRWECSADLPSDAIFHSVEVSCEGYDSRDDPYVLTGSCSLSYSLDAVGPGFYAGNYGSDGFNLGH 357
G SRR+ P+ QL C+ G SAGC + S C N+G+ D +WEC D+ S F V VSCEGYD RDDPY+L GSC L Y++D V G Y Y + ++ GH
Sbjct: 49 GKMTNSRRSHPVPQLKCV---GGSAGC---SAFTPSVVQCYNRGS-DGYDVQWECKTDMDSQYKFGEVAVSCEGYDYRDDPYILKGSCGLEYTIDVVSSGGY---YDHNNYHSGH 153
BLAST of mRNA_H-elongata_contig48651.12026.1 vs. uniprot
Match: UPI000C05468D (store-operated calcium entry-associated regulatory factor-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C05468D) HSP 1 Score: 92.4 bits (228), Expect = 4.630e-18 Identity = 50/115 (43.48%), Postives = 64/115 (55.65%), Query Frame = 1
Query: 13 GVRYGSRRTSPIEQLVCISDSGASAGCPRDQRWLFSSALCRNQGTGDDGQPRWECSADLPSDAIFHSVEVSCEGYDSRDDPYVLTGSCSLSYSLDAVGPGFYAGNYGSDGFNLGH 357
G SRR+ P+ QL C+ G SAGC + S C N+G+ D +WEC D+ S F V VSCEGYD RDDPY+L GSC L Y++D V G Y Y + ++ GH
Sbjct: 46 GKMTNSRRSHPVPQLKCV---GGSAGC---SAFTPSVVQCYNRGS-DGYDVQWECKTDMDSQYKFGEVAVSCEGYDYRDDPYILKGSCGLEYTIDVVSSGGY---YDHNNYHSGH 150
BLAST of mRNA_H-elongata_contig48651.12026.1 vs. uniprot
Match: UPI002026B010 (store-operated calcium entry-associated regulatory factor isoform X1 n=2 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002026B010) HSP 1 Score: 89.7 bits (221), Expect = 2.190e-17 Identity = 57/132 (43.18%), Postives = 69/132 (52.27%), Query Frame = 1
Query: 28 SRRTSPIEQLVCISDSGASAGCPRDQRWLFSSALCRNQGTGDDGQPRWECSADLPSDAIFHSVEVSCEGYDSRDDPYVLTGSCSLSYSLDAVGPGFYAGNY--GSDGFNLGH--------LISLVVFGALVY 393
SRRTSPI QL CI G +AGC + C N+G D +WEC A++ F +EVSCEGYD DDPYVL GSC L Y+L+ G Y NY GS H L+ +V+F LVY
Sbjct: 50 SRRTSPIPQLQCI---GGTAGCAA---YTPDVVQCYNKGW-DGSDVQWECKAEMDHSYRFGKIEVSCEGYDYPDDPYVLRGSCGLQYTLELSKNGQYKTNYFSGSHHSATAHDSIASGAGLVLVVLFVVLVY 174
BLAST of mRNA_H-elongata_contig48651.12026.1 vs. uniprot
Match: R7TVZ9_CAPTE (Store-operated calcium entry-associated regulatory factor n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TVZ9_CAPTE) HSP 1 Score: 90.1 bits (222), Expect = 2.740e-17 Identity = 45/95 (47.37%), Postives = 58/95 (61.05%), Query Frame = 1
Query: 31 RRTSPIEQLVCISDSGASAGCPRDQRWLFSSALCRNQGTGDDGQPRWECSADLPSDAIFHSVEVSCEGYDSRDDPYVLTGSCSLSYSLDAVGPGF 315
RR+SP+ QL C +G +AGC ++ CRNQGT D +WEC ADL + F +EV+CEGYD DDPY+L GSC L YSL+ G+
Sbjct: 49 RRSSPVAQLTC---TGGTAGC---SSYVPPVVQCRNQGT-DGYDIQWECKADLDNAYRFGKIEVTCEGYDHPDDPYILRGSCGLEYSLEMTKEGY 136
BLAST of mRNA_H-elongata_contig48651.12026.1 vs. uniprot
Match: UPI00193959A7 (store-operated calcium entry-associated regulatory factor-like n=2 Tax=Styela clava TaxID=7725 RepID=UPI00193959A7) HSP 1 Score: 90.1 bits (222), Expect = 3.050e-17 Identity = 51/147 (34.69%), Postives = 73/147 (49.66%), Query Frame = 1
Query: 31 RRTSPIEQLVCISDSGASAGCPRDQRWLFSSALCRNQGTGDDGQPRWECSADLPSDAIFHSVEVSCEGYDSRDDPYVLTGSCSLSYSLDAVGPGFYAGNYGSDGFNLGH------------LISLVVFGALVYRFLRALGKLSRSRP 435
RR+SP+ QL C+ G +AGC ++ + CRN G D +WEC D+ F V+V+CEGYD DDPYVL GSC L Y++D G G+N G + L+V GA+V+ + +S ++P
Sbjct: 49 RRSSPVPQLKCV---GGTAGC---HGFVPQTVQCRNVGF-DGHDVQWECKTDMDDSYRFGKVQVTCEGYDYPDDPYVLKGSCGLEYTIDVTDAGKSRNQNSWGGYNYGQSNLQHKESSGSCFLGLLVVGAIVFLIYKMCSAVSENQP 188
BLAST of mRNA_H-elongata_contig48651.12026.1 vs. uniprot
Match: A0A7I8VAE0_9ANNE (Store-operated calcium entry-associated regulatory factor n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VAE0_9ANNE) HSP 1 Score: 89.0 bits (219), Expect = 5.520e-17 Identity = 54/167 (32.34%), Postives = 82/167 (49.10%), Query Frame = 1
Query: 28 SRRTSPIEQLVCISDSGASAGCPRDQRWLFSSALCRNQGTGDDGQPRWECSADLPSDAIFHSVEVSCEGYDSRDDPYVLTGSCSLSYSLDAVGPGF----YAGNYG-----------------SDGFNLGHLISLVVFGALVYRFLR---ALGKLSRSRPPAYSEAP 456
+RR+SP+ L C+ G ++GC ++ + C N+G+ D +WEC D+ ++ F +EVSCEGYD DDPYVL GSC L Y+LD G + NYG S+G LGH+++L + ++Y + + + PP Y P
Sbjct: 43 ARRSSPVPHLKCV---GGTSGC---SSFIPQTVQCYNRGS-DGYDVQWECKTDMDNEYRFGKIEVSCEGYDYPDDPYVLKGSCGLEYTLDYTKEGHEKKNHQHNYGYNKPHYHKQSGYSQHHHSEGSMLGHIVTLGIIAFVIYVIYKTCLSTNHQAEDAPPPYGFRP 202 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48651.12026.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig48651.12026.1 >prot_H-elongata_contig48651.12026.1 ID=prot_H-elongata_contig48651.12026.1|Name=mRNA_H-elongata_contig48651.12026.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=265bp MFVIGVRYGSRRTSPIEQLVCISDSGASAGCPRDQRWLFSSALCRNQGTGback to top mRNA from alignment at H-elongata_contig48651:2166..4213+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig48651.12026.1 ID=mRNA_H-elongata_contig48651.12026.1|Name=mRNA_H-elongata_contig48651.12026.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2048bp|location=Sequence derived from alignment at H-elongata_contig48651:2166..4213+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig48651:2166..4213+ >mRNA_H-elongata_contig48651.12026.1 ID=mRNA_H-elongata_contig48651.12026.1|Name=mRNA_H-elongata_contig48651.12026.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1590bp|location=Sequence derived from alignment at H-elongata_contig48651:2166..4213+ (Himanthalia elongata Himel1 dioecious)back to top |