mRNA_H-elongata_contig48573.12018.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig48573.12018.1 vs. uniprot
Match: A0A6H5HYD7_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5HYD7_9HYME) HSP 1 Score: 73.2 bits (178), Expect = 2.190e-12 Identity = 43/129 (33.33%), Postives = 62/129 (48.06%), Query Frame = 1
Query: 28 DARDERGMTPLLAAVWRGTPSTVSHLVTRLGDDNMFSNQCTVTGMTCLHLAAERRTTVSQGDSAADMLAFLFKTFSGREGFPAVDTRDKQGCSALHVACMYGDVEAARCLLRHGADPTAATENRSTPLH 414
DAR G TPLL A++ G + V L+ R N+ +++ G TCLH+ R D +M LF+ + VD +D +G + LH A G++ LLR GA P A ++ TPLH
Sbjct: 486 DARKNDGWTPLLEAIYNGKINLVEILLRRSACPNLVNDK----GQTCLHIICRR------DDDEENMAKMLFEICDEKHQMVQVDAQDNEGWTPLHEAIFNGNMNLVEILLRRGASPNVADNDKFTPLH 604
BLAST of mRNA_H-elongata_contig48573.12018.1 vs. uniprot
Match: A0A6H5IDK1_9HYME (Gelsolin-like domain-containing protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IDK1_9HYME) HSP 1 Score: 66.2 bits (160), Expect = 5.920e-10 Identity = 46/138 (33.33%), Postives = 62/138 (44.93%), Query Frame = 1
Query: 1 NKYDQAMMHDARDERGMTPLLAAVWRGTPSTVSHLVTRLGDDNMFSNQCTVTGMTCLHLAAERRTTVSQGDSAADMLAFLFKTFSGREGFPAVDTRDKQGCSALHVACMYGDVEAARCLLRHGADPTAATENRSTPLH 414
++ Q + DARD G TPL AA++ G + V L+ R + N+ G T LH R D +M LF + VD RD +G + L VA G + LLR GA P A +N+ TPLH
Sbjct: 716 DEIHQIVEVDARDNEGWTPLHAAIFNGNINLVEVLLRRGANPNLADKS----GYTPLHFVCLRE------DDDDNMAKMLFAICEEKHQTVQVDARDNEGRTPLLVAIHNGKINLVEFLLRRGARPDLADDNKVTPLH 843
BLAST of mRNA_H-elongata_contig48573.12018.1 vs. uniprot
Match: A0A6H5IYV3_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IYV3_9HYME) HSP 1 Score: 64.7 bits (156), Expect = 1.960e-9 Identity = 49/132 (37.12%), Postives = 63/132 (47.73%), Query Frame = 1
Query: 28 DARDERGMTPLLAAVWRGTPSTVSHLVTRLGDDNMFSNQCTVTGMTCLHLAAERRTTVSQGDSAADMLAFLFKTFSGREGFPA--VDTRDKQGCSALHVACMYGD-VEAARCLLRHGADPTAATENRSTPLH 414
DARD+ G T L A+ G + L+ R D N+ +++ G T LH +R S+ D L + GR+ VD R+K G + LH A G V R LLR GADP AA E STPLH
Sbjct: 541 DARDKLGNTALHVALHHGKEAVTESLLRRDADPNLANDE----GSTPLHFICQR----SEEDDDRGWLERFLEIVDGRDARKTLRVDARNKLGRTPLHYAVADGHKVRIIRELLRRGADPNAADEEGSTPLH 664
BLAST of mRNA_H-elongata_contig48573.12018.1 vs. uniprot
Match: A0A7S1ND89_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1ND89_9EUGL) HSP 1 Score: 63.2 bits (152), Expect = 3.500e-9 Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 268 FPAVDTRDKQGCSALHVACMYGDVEAARCLLRHGADPTAATENRSTPLH 414
F ++TRD QGC+ALH A +G +E AR L+RHGAD A + + STPLH
Sbjct: 172 FADINTRDAQGCTALHHAAEHGQIEMARTLIRHGADTNAPSSDESTPLH 220
BLAST of mRNA_H-elongata_contig48573.12018.1 vs. uniprot
Match: A0A6H5IVG2_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IVG2_9HYME) HSP 1 Score: 62.0 bits (149), Expect = 1.780e-8 Identity = 43/134 (32.09%), Postives = 65/134 (48.51%), Query Frame = 1
Query: 13 QAMMHDARDERGMTPLLAAVWRGTPSTVSHLVTRLGDDNMFSNQCTVTGMTCLHLAAERRTTVSQGDSAADMLAFLFKTFSGREGFPAVDTRDKQGCSALHVACMYGDVEAARCLLRHGADPTAATENRSTPLH 414
Q + +AR++ G+TPL ++V V L+ R D N+ N G+T LH+ + +V+Q + D + F + VD +D G + L+ A ++ A LLR GA P A NRSTPLH
Sbjct: 782 QKIQVNARNKLGITPLHSSVDHNNRHLVEFLLKRGADPNVVDNY----GLTPLHIILASKESVTQNED--DFVEVFFNINDEIQQTVQVDVQDHAGRTPLNYALRCKHLKTAEYLLRRGAKPGLADNNRSTPLH 909
BLAST of mRNA_H-elongata_contig48573.12018.1 vs. uniprot
Match: A0A6H5HZY6_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5HZY6_9HYME) HSP 1 Score: 60.5 bits (145), Expect = 5.890e-8 Identity = 44/144 (30.56%), Postives = 64/144 (44.44%), Query Frame = 1
Query: 1 NKYDQAMMHDARDERGMTPLLAAV------WRGTPSTVSHLVTRLGDDNMFSNQCTVTGMTCLHLAAERRTTVSQGDSAADMLAFLFKTFSGREGFPAVDTRDKQGCSALHVACMYGDVEAARCLLRHGADPTAATENRSTPLH 414
+K Q + DARD G TPL A+ R T + L+ + N+ +++ G TCLH+ R D +M LF+ + VD +D +G + LH A G++ LLR GA P A N+ T LH
Sbjct: 206 DKKHQMVEIDARDNEGWTPLHRALDQDLRRSRLTKNLAELLLRWDANPNLVNDK----GQTCLHIICRR------DDDDKNMAKMLFEMCDEKHQMVQVDAQDNEGRTPLHEAIFNGNINLIEILLRKGASPNLADNNKLTLLH 339
BLAST of mRNA_H-elongata_contig48573.12018.1 vs. uniprot
Match: A0A6H5IZY6_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IZY6_9HYME) HSP 1 Score: 60.1 bits (144), Expect = 8.300e-8 Identity = 40/129 (31.01%), Postives = 58/129 (44.96%), Query Frame = 1
Query: 28 DARDERGMTPLLAAVWRGTPSTVSHLVTRLGDDNMFSNQCTVTGMTCLHLAAERRTTVSQGDSAADMLAFLFKTFSGREGFPAVDTRDKQGCSALHVACMYGDVEAARCLLRHGADPTAATENRSTPLH 414
DA+D G TPL A++ G + V L+ R + N+ + G T LH+ R A D+ F+ VD +D +G + LH A G++ LLR GA P A ++ TPLH
Sbjct: 575 DAQDNEGQTPLHKAIFNGNINLVEILMRRGANPNLADDN----GYTPLHILCLREY------DAVDLAKRFFEIGKEFNKPVKVDAQDNEGWTPLHEAIFNGNINLVEILLRRGASPNLADNDKLTPLH 693
BLAST of mRNA_H-elongata_contig48573.12018.1 vs. uniprot
Match: A0A6H5IQ39_9HYME (Uncharacterized protein n=2 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IQ39_9HYME) HSP 1 Score: 59.7 bits (143), Expect = 1.080e-7 Identity = 44/125 (35.20%), Postives = 56/125 (44.80%), Query Frame = 1
Query: 40 ERGMTPLLAAVWRGTPSTVSHLVTRLGDDNMFSNQCTVTGMTCLHLAAERRTTVSQGDSAADMLAFLFKTFSGREGFPAVDTRDKQGCSALHVACMYGDVEAARCLLRHGADPTAATENRSTPLH 414
E G TPLL A+ S V + R G D +N+ G T LH+ +S+ AD LF + VD RDK G + L+ A G + LLR GADP A E+R PLH
Sbjct: 183 ETGDTPLLLALSNVARSDVVESLLRGGADPNLANE---EGKTPLHV-------ISRKHYIADFADLLFDLLEEKNQLLRVDARDKDGRTPLYWALYNGHEKLVESLLRKGADPNLADEDRDAPLH 297
BLAST of mRNA_H-elongata_contig48573.12018.1 vs. uniprot
Match: A0A6H5IRQ0_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IRQ0_9HYME) HSP 1 Score: 59.7 bits (143), Expect = 1.110e-7 Identity = 44/125 (35.20%), Postives = 56/125 (44.80%), Query Frame = 1
Query: 40 ERGMTPLLAAVWRGTPSTVSHLVTRLGDDNMFSNQCTVTGMTCLHLAAERRTTVSQGDSAADMLAFLFKTFSGREGFPAVDTRDKQGCSALHVACMYGDVEAARCLLRHGADPTAATENRSTPLH 414
E G TPLL A+ S V + R G D +N+ G T LH+ +S+ AD LF + VD RDK G + L+ A G + LLR GADP A E+R PLH
Sbjct: 248 ETGDTPLLLALSNVARSDVVESLLRGGADPNLANE---EGKTPLHV-------ISRKHYIADFADLLFDLLEEKNQLLRVDARDKDGRTPLYWALYNGHEKLVESLLRKGADPNLADEDRDAPLH 362
BLAST of mRNA_H-elongata_contig48573.12018.1 vs. uniprot
Match: A0A6H5IX98_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IX98_9HYME) HSP 1 Score: 59.7 bits (143), Expect = 1.120e-7 Identity = 44/125 (35.20%), Postives = 56/125 (44.80%), Query Frame = 1
Query: 40 ERGMTPLLAAVWRGTPSTVSHLVTRLGDDNMFSNQCTVTGMTCLHLAAERRTTVSQGDSAADMLAFLFKTFSGREGFPAVDTRDKQGCSALHVACMYGDVEAARCLLRHGADPTAATENRSTPLH 414
E G TPLL A+ S V + R G D +N+ G T LH+ +S+ AD LF + VD RDK G + L+ A G + LLR GADP A E+R PLH
Sbjct: 548 ETGDTPLLLALSNVARSDVVESLLRGGADPNLANE---EGKTPLHV-------ISRKHYIADFADLLFDLLEEKNQLLRVDARDKDGRTPLYWALYNGHEKLVESLLRKGADPNLADEDRDAPLH 662 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48573.12018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig48573.12018.1 >prot_H-elongata_contig48573.12018.1 ID=prot_H-elongata_contig48573.12018.1|Name=mRNA_H-elongata_contig48573.12018.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp MMHDARDERGMTPLLAAVWRGTPSTVSHLVTRLGDDNMFSNQCTVTGMTCback to top mRNA from alignment at H-elongata_contig48573:3032..3445- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig48573.12018.1 ID=mRNA_H-elongata_contig48573.12018.1|Name=mRNA_H-elongata_contig48573.12018.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=414bp|location=Sequence derived from alignment at H-elongata_contig48573:3032..3445- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig48573:3032..3445- >mRNA_H-elongata_contig48573.12018.1 ID=mRNA_H-elongata_contig48573.12018.1|Name=mRNA_H-elongata_contig48573.12018.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=792bp|location=Sequence derived from alignment at H-elongata_contig48573:3032..3445- (Himanthalia elongata Himel1 dioecious)back to top |