mRNA_H-elongata_contig48417.11994.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig48417.11994.1 vs. uniprot
Match: D8LHG3_ECTSI (Serine palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHG3_ECTSI) HSP 1 Score: 246 bits (629), Expect = 8.300e-79 Identity = 121/142 (85.21%), Postives = 131/142 (92.25%), Query Frame = 1
Query: 25 VVEKFDGSYLRVEGIDRPLLNMANFDFLGLGQRKELKEAAVTALDKYGCGSCGPRGFYGTIDVHMKGVEENVQTGINLSRSTVLTFKHNDMDDLER---DIAEEDNRLKRNVLDQRRFIVVEGLYRNYGDLCPLPRLLELKA 441
VV++F G YLRVEGI++PLLNMANFDFLG+GQR+ELK+AAV ALDKYGCGSCGPRGFYGTIDVH KGVEENVQTGINLSRSTV TFKHNDMDDLER +IA ED ++KRNVLDQRRFIVVEGLYRNYGDLCPLPRLLELK
Sbjct: 81 VVQEFSGPYLRVEGIEKPLLNMANFDFLGMGQREELKQAAVQALDKYGCGSCGPRGFYGTIDVHTKGVEENVQTGINLSRSTVRTFKHNDMDDLERVLKEIAAEDKKVKRNVLDQRRFIVVEGLYRNYGDLCPLPRLLELKV 222
BLAST of mRNA_H-elongata_contig48417.11994.1 vs. uniprot
Match: A0A6H5KV36_9PHAE (Aminotran_1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV36_9PHAE) HSP 1 Score: 224 bits (572), Expect = 4.980e-68 Identity = 121/185 (65.41%), Postives = 131/185 (70.81%), Query Frame = 1
Query: 25 VVEKFDGSYLRVEGIDRPLLNMANFDFLGLGQRKELKEAAVTALDKYGCGSCGPRGFYGTIDVHMK------------------------------------------GVEENVQTGINLSRSTVLTFKHNDMDDLER---DIAEEDNRLKRNVLDQRRFIVVEGLYRNYGDLCPLPRLLELKAK 444
VV++F G YLRVEGI++PLLNMANFDFLG+GQR+ELK+AAV ALDKYGCGSCGPRGFYGTIDVH K GVEENVQTGINLSRSTV TFKHNDM DLER +IA ED ++ RNVLDQRRFIVVEGLYRNYGDLCPLPRLLELKAK
Sbjct: 186 VVQEFSGPYLRVEGIEKPLLNMANFDFLGMGQREELKQAAVQALDKYGCGSCGPRGFYGTIDVHTKIEDEVAAFMGTEEAISYSDSATTISSTIPAFAKKGDLTVVDQGVEENVQTGINLSRSTVRTFKHNDMADLERVLKEIAAEDKKVNRNVLDQRRFIVVEGLYRNYGDLCPLPRLLELKAK 370
BLAST of mRNA_H-elongata_contig48417.11994.1 vs. uniprot
Match: A0A4D9CT10_9STRA (Aminotran_1_2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT10_9STRA) HSP 1 Score: 164 bits (414), Expect = 3.160e-45 Identity = 94/189 (49.74%), Postives = 117/189 (61.90%), Query Frame = 1
Query: 13 AREQVVEKFDGSYLRVEGIDRPLLNMANFDFLGLGQRKELKEAAVTALDKYGCGSCGPRGFYGTIDVHM------------------------------------------KGVEENVQTGINLSRSTVLTFKHNDMDDLER---DIAEEDNRLKRNVLDQRRFIVVEGLYRNYGDLCPLPRLLELKAK 444
A+ VVE+ DG+ + V G + L+NMA+FDFLGL R E+KEAA AL+KYGCGSCGPRGFYG+IDVH+ +GV E +QT INLSR+ V F+HNDM+DLER ++AEED RL RN +QRRFIVVEGLY+N+GDLCPLP L+ LK +
Sbjct: 119 AQALVVEEVDGTRVVVNG--KKLINMASFDFLGLAGRGEVKEAARAALNKYGCGSCGPRGFYGSIDVHVMAEQAMAAFLGAEEAISYSDAASSVSSTLPAFAKKGDLLIADEGVYEPIQTAINLSRAQVRYFRHNDMEDLERVLREVAEEDRRLDRNEREQRRFIVVEGLYKNFGDLCPLPALIALKRQ 305
BLAST of mRNA_H-elongata_contig48417.11994.1 vs. uniprot
Match: A0A7S2WP68_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WP68_9STRA) HSP 1 Score: 163 bits (412), Expect = 6.450e-45 Identity = 91/185 (49.19%), Postives = 107/185 (57.84%), Query Frame = 1
Query: 25 VVEKFDGSYLRVEGIDRPLLNMANFDFLGLGQRKELKEAAVTALDKYGCGSCGPRGFYGTIDVHM------------------------------------------KGVEENVQTGINLSRSTVLTFKHNDMDDLE---RDIAEEDNRLKRNVLDQRRFIVVEGLYRNYGDLCPLPRLLELKAK 444
V+E Y +V G++ P+LNM FDFLG+GQR E+K+AA ALDKYGCGSCGPRGFYG+IDVH+ G + + TG+NLSRS VL FKHNDM DLE I EED RL R QRRFI+VEGLYRNYGD+ PLP L+ELK K
Sbjct: 110 VLEGKAKKYTKVRGVEEPVLNMVTFDFLGIGQRDEIKQAATKALDKYGCGSCGPRGFYGSIDVHVYLEQHLAKYFGTEEAIVYSDAASTLSSSIPAFSNRADLLVVDDGCNDPIMTGVNLSRSRVLFFKHNDMKDLESILEKIDEEDKRLNRKP--QRRFIIVEGLYRNYGDIAPLPELMELKEK 292
BLAST of mRNA_H-elongata_contig48417.11994.1 vs. uniprot
Match: A0A835Z5A0_9STRA (Pyridoxal phosphate-dependent transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5A0_9STRA) HSP 1 Score: 160 bits (406), Expect = 4.200e-44 Identity = 93/202 (46.04%), Postives = 112/202 (55.45%), Query Frame = 1
Query: 25 VVEKFDGSYLRVEGIDRPLLNMANFDFLGLGQRKELKEAAVTALDKYGCGSCGPRGFYGTIDVHMK------------------------------------------GVEENVQTGINLSRSTVLTFKHNDMDDL--------------------ERDIAEEDNRLKRNVLDQRRFIVVEGLYRNYGDLCPLPRLLELKAK 444
VVE+ +G L + G + L+NM FDFLG GQ +E++ AAV A++KYGCGSCGPRGFYGTID H+K GV E VQTG++LSRSTV FKHNDMDDL R++ +ED R VLDQRRFIVVEGLYRN+GDL P+P+LLELK K
Sbjct: 111 VVERVEGGELVMAGTGQRLVNMVAFDFLGFGQGREVRAAAVAAMEKYGCGSCGPRGFYGTIDAHLKLEDQAAAFMRTEAAISYSDSAATVSSCIAAFAKRGDLILADMGVHEAVQTGLDLSRSTVRFFKHNDMDDLLRVLQEPXXXXXXXXXXXXXXREVEQEDVSTGRRVLDQRRFIVVEGLYRNFGDLAPMPKLLELKEK 312
BLAST of mRNA_H-elongata_contig48417.11994.1 vs. uniprot
Match: A0A2R5GIH0_9STRA (Serine palmitoyltransferase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIH0_9STRA) HSP 1 Score: 153 bits (386), Expect = 4.640e-41 Identity = 86/185 (46.49%), Postives = 107/185 (57.84%), Query Frame = 1
Query: 25 VVEKFDGSYLRVEGIDRPLLNMANFDFLGLGQRKELKEAAVTALDKYGCGSCGPRGFYGTIDVHM------------------------------------------KGVEENVQTGINLSRSTVLTFKHNDMDDLER---DIAEEDNRLKRNVLDQRRFIVVEGLYRNYGDLCPLPRLLELKAK 444
++E Y +V G+D+ +LN+ DFLG GQRKE+ +AA AL+KYGCGSCGPRGFYG+IDVH+ + V + + TG+NLSRS VL FKHNDM+DL R + EED RLKR QRRFIVVEGLYRNYGD+CPL ++ LK K
Sbjct: 114 LLETKPSKYTKVSGVDKEVLNLTTMDFLGFGQRKEIHKAAEDALNKYGCGSCGPRGFYGSIDVHVFLEKDLANFFGTDDCIVYSDADSTATSAIPAFSNRSDLLVVDEAVNDAIITGVNLSRSRVLFFKHNDMEDLARVLQKVEEEDRRLKRKP--QRRFIVVEGLYRNYGDVCPLDEVVGLKNK 296
BLAST of mRNA_H-elongata_contig48417.11994.1 vs. uniprot
Match: A0A484E098_BRELC (Aminotran_1_2 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E098_BRELC) HSP 1 Score: 145 bits (366), Expect = 2.770e-38 Identity = 80/185 (43.24%), Postives = 106/185 (57.30%), Query Frame = 1
Query: 25 VVEKFDGSYLRVEGIDRPLLNMANFDFLGLGQRKELKEAAVTALDKYGCGSCGPRGFYGTIDVHM------------------------------------------KGVEENVQTGINLSRSTVLTFKHNDMDDLER---DIAEEDNRLKRNVLDQRRFIVVEGLYRNYGDLCPLPRLLELKAK 444
+VE G++++++G +PL+N+A FDFLG+G R ELKE AV AL KYGCGSCGPRGFYGTIDVH G +++ G NL+R TVL +KHND++DLER + EED R KR QRR++V E L+RN+GD+ LP+L+EL K
Sbjct: 112 IVEGTPGTHIKLQGFAKPLVNLATFDFLGMGSRPELKEVAVKALTKYGCGSCGPRGFYGTIDVHEILEKDIAQMMGTTDSITFSDTEATSSSVLPAFAKRGDLIVMDDGCNDSILVGANLARCTVLYYKHNDVEDLERVLKSVREEDKRKKRGSDCQRRYVVTEALFRNHGDMVYLPQLVELCNK 296
BLAST of mRNA_H-elongata_contig48417.11994.1 vs. uniprot
Match: H3GT37_PHYRM (Aminotran_1_2 domain-containing protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=H3GT37_PHYRM) HSP 1 Score: 139 bits (349), Expect = 7.570e-36 Identity = 77/185 (41.62%), Postives = 102/185 (55.14%), Query Frame = 1
Query: 25 VVEKFDGSYLRVEGIDRPLLNMANFDFLGLGQRKELKEAAVTALDKYGCGSCGPRGFYGTIDVHM------------------------------------------KGVEENVQTGINLSRSTVLTFKHNDMDDLER---DIAEEDNRLKRNVLDQRRFIVVEGLYRNYGDLCPLPRLLELKAK 444
+VE G++L+++G PLLN+A FDFLGLG R ELKE AV L KYGCGSCGPRGFYGTID H +G +++ G L+R TVL +KHND++DLER + +ED R R QRR++V E L+RN+GD+ LP+++EL K
Sbjct: 112 IVEDTPGTHLKLQGYANPLLNLATFDFLGLGSRPELKEVAVKTLTKYGCGSCGPRGFYGTIDTHEILEKDIAHMMGTTDSITFSDTEATSSSVLPAFAKRGDLIVMDEGCNDSILVGATLARCTVLYYKHNDVEDLERVLQRVRDEDKRKNRGSDCQRRYVVTEALFRNHGDMIELPKVVELCNK 296
BLAST of mRNA_H-elongata_contig48417.11994.1 vs. uniprot
Match: A0A1V9YDK3_9STRA (Serine palmitoyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDK3_9STRA) HSP 1 Score: 137 bits (344), Expect = 3.290e-35 Identity = 75/185 (40.54%), Postives = 100/185 (54.05%), Query Frame = 1
Query: 25 VVEKFDGSYLRVEGIDRPLLNMANFDFLGLGQRKELKEAAVTALDKYGCGSCGPRGFYGTIDVHM------------------------------------------KGVEENVQTGINLSRSTVLTFKHNDMDDLER---DIAEEDNRLKRNVLDQRRFIVVEGLYRNYGDLCPLPRLLELKAK 444
+VE G+++++ GI P+LN+ DFLG R E+K+ A AL KYGCGSCGPRGFYGTID H GV +++ TG+NL+R T L FKHNDM DLER + + D + R QRR++V EGL+RNYGD+ PLP+++EL K
Sbjct: 114 IVEDTPGTHMKLRGIAAPVLNLGTMDFLGFANRPEIKKTARDALTKYGCGSCGPRGFYGTIDTHELLEKDIAKFIGTTDSITFSDIEATASSVLPAFAKRGDLIVVDDGVNDSILTGVNLARCTTLYFKHNDMGDLERVLKSVRDADLKAGRRSDCQRRYLVTEGLFRNYGDIVPLPQVVELTRK 298
BLAST of mRNA_H-elongata_contig48417.11994.1 vs. uniprot
Match: A0A067CM92_SAPPC (Aminotran_1_2 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CM92_SAPPC) HSP 1 Score: 134 bits (337), Expect = 3.460e-34 Identity = 73/182 (40.11%), Postives = 98/182 (53.85%), Query Frame = 1
Query: 25 VVEKFDGSYLRVEGIDRPLLNMANFDFLGLGQRKELKEAAVTALDKYGCGSCGPRGFYGTIDVHM------------------------------------------KGVEENVQTGINLSRSTVLTFKHNDMDDLER---DIAEEDNRLKRNVLDQRRFIVVEGLYRNYGDLCPLPRLLEL 435
+VE +++++ GI P+LN+ DFLG+ R E+K A AL KYGCGSCGPRGFYGTID H GV ++++TG+NL+R T L FKHNDM DLER + + D + R QRR+IV EGL+RNYGD+ PLP+++ L
Sbjct: 120 IVEDTPNTHMKLRGIASPVLNLGTMDFLGMASRDEIKTTARNALTKYGCGSCGPRGFYGTIDTHEILEKDIAHFIGTTDSITFSDIEATASSVLPAFAKRGDLIVVDDGVNDSIRTGVNLARCTTLYFKHNDMADLERVLKSVRDADKKAGRRSDCQRRYIVTEGLFRNYGDILPLPKVVAL 301 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48417.11994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig48417.11994.1 >prot_H-elongata_contig48417.11994.1 ID=prot_H-elongata_contig48417.11994.1|Name=mRNA_H-elongata_contig48417.11994.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=149bp MLWHAREQVVEKFDGSYLRVEGIDRPLLNMANFDFLGLGQRKELKEAAVTback to top mRNA from alignment at H-elongata_contig48417:105..2778- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig48417.11994.1 ID=mRNA_H-elongata_contig48417.11994.1|Name=mRNA_H-elongata_contig48417.11994.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2674bp|location=Sequence derived from alignment at H-elongata_contig48417:105..2778- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig48417:105..2778- >mRNA_H-elongata_contig48417.11994.1 ID=mRNA_H-elongata_contig48417.11994.1|Name=mRNA_H-elongata_contig48417.11994.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=894bp|location=Sequence derived from alignment at H-elongata_contig48417:105..2778- (Himanthalia elongata Himel1 dioecious)back to top |